Bacillus weihaiensis strain Alg07 plasmid unnamed, complete sequence.
type: Entry
definition: Bacillus weihaiensis strain Alg07 plasmid unnamed, complete sequence.
sequence version: NZ_CP016021.1
sequence date: 2023-03-19
sequence: sequence
division: CON
label: NZ_CP016021.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN05178567
keyword: RefSeq
source: Bacillus weihaiensis
organism: Bacillus weihaiensis
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus.
reference: 1
references: 27901120
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP016021.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.2.0\nGenome Coverage :: 106.75x\nSequencing Technology :: PacBio RS II\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/19/2023 11:32:46\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,272\nCDSs (total) :: 4,126\nGenes (coding) :: 4,043\nCDSs (with protein) :: 4,043\nGenes (RNA) :: 146\nrRNAs :: 12, 11, 11 (5S, 16S, 23S)\ncomplete rRNAs :: 12, 11, 11 (5S, 16S, 23S)\ntRNAs :: 105\nncRNAs :: 7\nPseudo Genes (total) :: 83\nCDSs (without protein) :: 83\nPseudo Genes (ambiguous residues) :: 0 of 83\nPseudo Genes (frameshifted) :: 37 of 83\nPseudo Genes (incomplete) :: 54 of 83\nPseudo Genes (internal stop) :: 22 of 83\nPseudo Genes (multiple problems) :: 24 of 83\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16403
topology: circular
so has quality: SO_0000988
location: 1..16403
location: region:1-16403:1
RO_0002162: 1547283

NZ_CP016021
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN05178567
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation
author: Zhu, Y.
author: Chen, P.
author: Bao, Y.
author: Men, Y.
author: Zeng, Y.
author: Yang, J.
author: Sun, J.
author: Sun, Y.
journal: Sci Rep 6, 38248 (2016)
pubmed: 27901120
comments: Publication Status: Online-Only

27901120
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Zhu, Y.
author: Chen, P.
author: Sun, Y.
journal: Submitted (09-JUN-2016) The Laboratory of Functional Sugar and Natural Bioactive Products, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin 300308, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16403:1
position: 16403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16403:1:source
so part of: sequence
organism: Bacillus weihaiensis
mol type: genomic DNA
strain: Alg07
isolation source: marine
culture collection: CGMCC:9391
type material: type strain of Bacillus weihaiensis
plasmid: unnamed
country: China: Weihai, Shandong
collection date: 2013-11-30

1547283
type: Taxonomy
SIO_000068: taxonomy

A9C19_RS21015
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21015
old locus tag: A9C19_20645
so part of: sequence
location: complement(join(16341..16403,1..294))
location: region:1-16403:-1
so has part: feature:1-294:-1:exon
so has part: feature:16341-16403:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16403:-1
position: 16403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-294:-1:exon

position:294:-1
position: 294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16341-16403:-1:exon

position:16341:-1
position: 16341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

A9C19_RS21015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21015
old locus tag: A9C19_20645
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILGEKEENLPELYKKVLVMIPKGSDKPVKVSEISKLTGIGSVTVREIVSKLRVTYGYKIGTSNEAGRSGYYIIETAEEKEATIRNLRSRAYKILKVAKCNREWTRSISTRNDFVEIH
SIO_010081: A9C19_RS21015
subclass of: SO_0000673
so part of: A9C19_RS21015
location: complement(join(16341..16403,1..294))
location: region:1-16403:-1
so has part: feature:1-294:-1:exon
so has part: feature:16341-16403:-1:exon

WP_072581996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16341-16403:-1:exon

A9C19_RS21020
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21020
old locus tag: A9C19_20650
so part of: sequence
location: complement(1798..2628)
location: region:1798-2628:-1
so has part: feature:1798-2628:-1:exon
subclass of: SO_0000010

position:1798:-1
position: 1798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2628:-1
position: 2628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798-2628:-1:exon

A9C19_RS21020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21020
old locus tag: A9C19_20650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000040570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKLLLDEQPLMVMPKLATKIGLNEAIVLQQIHYWNEINKKANNNFRDGYHWTFNSIEEGWQEQFPFWSSKTIQRTMNNLEKMKLVVTGNYNKLKIDRTKWYRIDYIVLKTLEESPFGQIDQKNMTDWLNHLDKLRLPLPENNTENSTKIKNKNRGQNSVADRIDFSAYVMILDDDDFTQLNRDQLEALADFVSLYEEYRGERHPKLTFEQWEKSREEMLYVVDNSMGKDFDLDLEDEVDLMRSYFETDYKEGCNYSILHYISGDLRAIRYYDVIH
SIO_010081: A9C19_RS21020
subclass of: SO_0000673
so part of: A9C19_RS21020
location: complement(1798..2628)
location: region:1798-2628:-1
so has part: feature:1798-2628:-1:exon

WP_072581979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1798-2628:-1:exon

A9C19_RS21025
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21025
old locus tag: A9C19_20655
so part of: sequence
location: complement(2634..2813)
location: region:2634-2813:-1
so has part: feature:2634-2813:-1:exon
subclass of: SO_0000010

position:2634:-1
position: 2634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2813:-1
position: 2813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2634-2813:-1:exon

A9C19_RS21025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21025
old locus tag: A9C19_20655
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLSAEELQQQLNISRSTLYRLRKEGLPHVQVGYRTIRYDLVEVLKWLEENDYKNKRQEG
SIO_010081: A9C19_RS21025
subclass of: SO_0000673
so part of: A9C19_RS21025
location: complement(2634..2813)
location: region:2634-2813:-1
so has part: feature:2634-2813:-1:exon

WP_072581980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2634-2813:-1:exon

A9C19_RS21030
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21030
old locus tag: A9C19_20660
so part of: sequence
location: complement(3070..3462)
location: region:3070-3462:-1
so has part: feature:3070-3462:-1:exon
subclass of: SO_0000010

position:3070:-1
position: 3070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3462:-1
position: 3462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070-3462:-1:exon

A9C19_RS21030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21030
old locus tag: A9C19_20660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIEVRDLFKHLLSDDELVDFAIRCVRKETKPKVIFVNNSNDAMDRETVDKPILIVIDPDTKKIFWTGNIIARTMKDIELMKKLKIVYTSDIEVGKTVKINDIILYGTTHERVIYAETIEDKEKSTLSCN
SIO_010081: A9C19_RS21030
subclass of: SO_0000673
so part of: A9C19_RS21030
location: complement(3070..3462)
location: region:3070-3462:-1
so has part: feature:3070-3462:-1:exon

WP_072581981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3070-3462:-1:exon

A9C19_RS21035
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21035
old locus tag: A9C19_20665
so part of: sequence
location: complement(3673..4536)
location: region:3673-4536:-1
so has part: feature:3673-4536:-1:exon
subclass of: SO_0000010

position:3673:-1
position: 3673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4536:-1
position: 4536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3673-4536:-1:exon

A9C19_RS21035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21035
old locus tag: A9C19_20665
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKNADYLEAYRDYLVEEEKSQGTIDSYTTHVKGFLDFVNKDIKKVKRTDLTTYKEHLKQRKLKVSSINSKLVGIKQFIDFLNERFELSINARVKQEKTQKQYTLKDEELLSTADYELLISTIQDAGDIRAKALFEAMYFSGMRISEALQLRVDHVQTGKRIIEDIKGKGGKYRDIYISDKLLTSLRSYLKIRKQPYADTTKLLFVGERGPLSRQTAHNMMKKYAHMANIESTKAHVHNLRHLFGLRLAEQGVPIQDIAKYMGHTSIEVTKIYLEKPQSYYSSLIDQL
SIO_010081: A9C19_RS21035
subclass of: SO_0000673
so part of: A9C19_RS21035
location: complement(3673..4536)
location: region:3673-4536:-1
so has part: feature:3673-4536:-1:exon

WP_072581982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3673-4536:-1:exon

A9C19_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21925
so part of: sequence
location: complement(4578..4730)
location: region:4578-4730:-1
so has part: feature:4578-4730:-1:exon
subclass of: SO_0000010

position:4578:-1
position: 4578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4730:-1
position: 4730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4578-4730:-1:exon

A9C19_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVKYIENGVEKEIIVDRLRDIEEGFLTLIIIRDGLSFEHKMSLDKVTSY
SIO_010081: A9C19_RS21925
subclass of: SO_0000673
so part of: A9C19_RS21925
location: complement(4578..4730)
location: region:4578-4730:-1
so has part: feature:4578-4730:-1:exon

WP_158515123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4578-4730:-1:exon

A9C19_RS21040
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21040
old locus tag: A9C19_20670
so part of: sequence
location: complement(4761..5168)
location: region:4761-5168:-1
so has part: feature:4761-5168:-1:exon
subclass of: SO_0000010

position:4761:-1
position: 4761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5168:-1
position: 5168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5168:-1:exon

A9C19_RS21040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21040
old locus tag: A9C19_20670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKELLLLHKKMYNVRWNAAEGDPVQLEKEFMLVADREGVDLEKVNEMLEQLYIPPYKKEELPQHLRSNRGGLREGAGRPAMGVTKKVSITLTEEQWEKIDKEKGKGSYSAYFRDLVVDMEEFMTGYESVLKEDDL
SIO_010081: A9C19_RS21040
subclass of: SO_0000673
so part of: A9C19_RS21040
location: complement(4761..5168)
location: region:4761-5168:-1
so has part: feature:4761-5168:-1:exon

WP_072581983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5168:-1:exon

A9C19_RS21045
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21045
old locus tag: A9C19_20675
so part of: sequence
location: 5717..6289
location: region:5717-6289:1
so has part: feature:5717-6289:1:exon
subclass of: SO_0000010

position:5717:1
position: 5717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6289:1
position: 6289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5717-6289:1:exon

A9C19_RS21045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21045
old locus tag: A9C19_20675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000003057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3967 domain-containing protein
translation: MSGTEKPLSSKEVSSILDIGDSTLRKWCIAIEEQDYFFSRTDGNRRLFFSRDLELLRNYRKYVQVQNISMSNAAKLVVEGLNGIVEQENEVENKKNTVLSDRSNNEVIDRLMNYIEQQEERQKQQEEFNKALLNKLDEQQKYIEERLNKRDDALMQSLREVQETRKLIAAAEEKREEESKKGFFQRLLGK
SIO_010081: A9C19_RS21045
subclass of: SO_0000673
so part of: A9C19_RS21045
location: 5717..6289
location: region:5717-6289:1
so has part: feature:5717-6289:1:exon

WP_072581984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5717-6289:1:exon

A9C19_RS22385
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS22385
so part of: sequence
location: 6390..6758
location: region:6390-6758:1
so has part: feature:6390-6758:1:exon
subclass of: SO_0000010

position:6390:1
position: 6390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6758:1
position: 6758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6390-6758:1:exon

A9C19_RS22385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS22385
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIHTLFKPIIAFECASCNTTFGVSTHKNEANCPNCSSECKSSSEGFMAYNQVAEEEFQTVKEVFNEDELLKADEVAKIIGKSKRVAYEIMDEKDFPLIRIRRSKRVLKSDFFEWLRQSRFNT
SIO_010081: A9C19_RS22385
subclass of: SO_0000673
so part of: A9C19_RS22385
location: 6390..6758
location: region:6390-6758:1
so has part: feature:6390-6758:1:exon

WP_233499314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6390-6758:1:exon

A9C19_RS21055
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21055
old locus tag: A9C19_20685
so part of: sequence
location: complement(6957..7550)
location: region:6957-7550:-1
so has part: feature:6957-7550:-1:exon
subclass of: SO_0000010

position:6957:-1
position: 6957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7550:-1
position: 7550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6957-7550:-1:exon

A9C19_RS21055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21055
old locus tag: A9C19_20685
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF014505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MTERKTTSNPKRTGSSTIVAPVPLDINTVTGQYKGAIKRMDTQKQQEILKWLNTQTLYFRWENSFNPESLIKYNRGDIIFTNFGRNIGSEFNGLHYAAVLDDNDKSSETLMIVPLSSLDENESEDDLHEMDAFLGTIPAINNKKVFARVAQMRSLSKIRIYNPKKAEQTKYRLTSPQLDIIDEKIRRYFTSIPKKED
SIO_010081: A9C19_RS21055
subclass of: SO_0000673
so part of: A9C19_RS21055
location: complement(6957..7550)
location: region:6957-7550:-1
so has part: feature:6957-7550:-1:exon

WP_083584525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6957-7550:-1:exon

A9C19_RS21060
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21060
old locus tag: A9C19_20690
so part of: sequence
location: complement(7883..8560)
location: region:7883-8560:-1
so has part: feature:7883-8560:-1:exon
subclass of: SO_0000010

position:7883:-1
position: 7883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8560:-1
position: 8560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7883-8560:-1:exon

A9C19_RS21060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21060
old locus tag: A9C19_20690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017695210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLTKRDKAIIEDLNRFRVMDRDSIAHIHFKTLKNPNYAANNVLLRLLREGHLQRSTAFVPYVYFGPDVNMKKNSAKIGHFLAIVEVYKDILKYGNLHTFLVEPKYGEKGMAEPDIFCIFRRTPFFIEVQKTIYSEKQMNDKLNRYRDLYNSGIITREEWQPPEKPVFPHILIISEQRYAIDRSYPFKVIQAQSFTKFMDMMKPKEEKKTQHQKSGNGAIKIKVQ
SIO_010081: A9C19_RS21060
subclass of: SO_0000673
so part of: A9C19_RS21060
location: complement(7883..8560)
location: region:7883-8560:-1
so has part: feature:7883-8560:-1:exon

WP_072581985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7883-8560:-1:exon

A9C19_RS21065
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21065
old locus tag: A9C19_20695
so part of: sequence
location: complement(8541..9713)
location: region:8541-9713:-1
so has part: feature:8541-9713:-1:exon
subclass of: SO_0000010

position:8541:-1
position: 8541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9713:-1
position: 9713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8541-9713:-1:exon

A9C19_RS21065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21065
old locus tag: A9C19_20695
inference: COORDINATES: protein motif:HMM:NF024793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MLSEFIKRQKAKSDLNKCFMNADLYKIYKNSSGRQFFSYPKIQAVVFKEDLIQYTFTLLNGMDPKEVLKREYVFKQSFGPNIELEGDYKRFILTIYKKTMPKELIYKQEEIIRNISQHSLGIICGQNRFGEYVTFDLLKQPHILIAGETGSGKSTQLRSILTSLIALKKPHELELYLGDCKKSEFHIFRKVEHVKCVLSNVKDIADMLQHIKQELDERSDLTEVFEVSHVDDLPEEHKRPYIVVCIDEFVMLRKNEDVMEILTELVAIGRTLGVFAVLSMQRPNAKVLDTTIRANLTVSMGFKLRDMIEARIVNTPGAHEIEHSGRFIMNSDQLYELQAPYLTLENAKKLLSPFMVVKEAKEVKNDSEDGSELSNHLLEEDVFIDAIDEA
SIO_010081: A9C19_RS21065
subclass of: SO_0000673
so part of: A9C19_RS21065
location: complement(8541..9713)
location: region:8541-9713:-1
so has part: feature:8541-9713:-1:exon

WP_072581986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8541-9713:-1:exon

A9C19_RS21070
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21070
old locus tag: A9C19_20700
so part of: sequence
location: complement(9725..10057)
location: region:9725-10057:-1
so has part: feature:9725-10057:-1:exon
subclass of: SO_0000010

position:9725:-1
position: 9725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10057:-1
position: 10057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9725-10057:-1:exon

A9C19_RS21070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21070
old locus tag: A9C19_20700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPKKTEVIDFREFLAGSSKSNQSSDITLYSGFLPSMTISSFFDMSPTMSGLYCVVLGVGCFAILSHLIEVNSAKNGFNKLAYIVESITRFILPVGTFSFMIWVLFKIV
SIO_010081: A9C19_RS21070
subclass of: SO_0000673
so part of: A9C19_RS21070
location: complement(9725..10057)
location: region:9725-10057:-1
so has part: feature:9725-10057:-1:exon

WP_145925833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9725-10057:-1:exon

A9C19_RS21075
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21075
old locus tag: A9C19_20705
so part of: sequence
location: 10422..10646
location: region:10422-10646:1
so has part: feature:10422-10646:1:exon
subclass of: SO_0000010

position:10422:1
position: 10422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10646:1
position: 10646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10422-10646:1:exon

A9C19_RS21075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21075
old locus tag: A9C19_20705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018768154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MWGIGKKRSKIGKFIDKHGYSQEDLCKVAKIGRNTASRICSDPQYSPSLSTIQKVMKAIRKIDPNAKADDFFDM
SIO_010081: A9C19_RS21075
subclass of: SO_0000673
so part of: A9C19_RS21075
location: 10422..10646
location: region:10422-10646:1
so has part: feature:10422-10646:1:exon

WP_072581988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10422-10646:1:exon

A9C19_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21930
so part of: sequence
location: 10871..11026
location: region:10871-11026:1
so has part: feature:10871-11026:1:exon
subclass of: SO_0000010

position:10871:1
position: 10871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11026:1
position: 11026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10871-11026:1:exon

A9C19_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNEWSKFIEELEKEGISPKEANRMIRTFQVMEIVMKNMKETDIEEDSKQF
SIO_010081: A9C19_RS21930
subclass of: SO_0000673
so part of: A9C19_RS21930
location: 10871..11026
location: region:10871-11026:1
so has part: feature:10871-11026:1:exon

WP_158515124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10871-11026:1:exon

A9C19_RS21080
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21080
old locus tag: A9C19_20710
so part of: sequence
location: complement(11110..11538)
location: region:11110-11538:-1
so has part: feature:11110-11538:-1:exon
subclass of: SO_0000010

position:11110:-1
position: 11110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11538:-1
position: 11538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11110-11538:-1:exon

A9C19_RS21080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21080
old locus tag: A9C19_20710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011888482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF559 domain-containing protein
translation: MLELIGLVVFVLIFVIMPIFYTVDHIRNPEFADVSKVDIQRLKCESPIENRLYSALTTRGYYVATQVPCGKYRIDLALPHHNLAIECDGKKYHSTPAQKAHDRRKNIYLRKNGWKVLRFSGKQINGNMKRVLKIIEDTINTD
SIO_010081: A9C19_RS21080
subclass of: SO_0000673
so part of: A9C19_RS21080
location: complement(11110..11538)
location: region:11110-11538:-1
so has part: feature:11110-11538:-1:exon

WP_072581999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11110-11538:-1:exon

A9C19_RS21085
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21085
old locus tag: A9C19_20715
so part of: sequence
location: complement(11622..13736)
location: region:11622-13736:-1
so has part: feature:11622-13736:-1:exon
subclass of: SO_0000010

position:11622:-1
position: 11622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13736:-1
position: 13736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11622-13736:-1:exon

A9C19_RS21085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21085
old locus tag: A9C19_20715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKRIKGITIELDGETTGLDKALKDVNKRSSEVNNELRDIERLLKFDPSNAEALAQKQKLLADQVENSTQKLKQLQAAEKEVEQQFNSGKIGEEQFRSFKREVQFAEKEVINFKAKLATVDGGSLSKAEKGLKGIKDAAEKAESSLESLESSFKSVGKGAVALGAAGSAAIGGLVTGMEDYNRTMARLNANSMNGGFNPQVMEEATQKVAALTGEMDSAVETVSNLMQTDLTEQQISTVLDEINGAAIRFSDTLKTEGIADGLQETLATGQAIGPFAELLERSGVELEKFDAGLAKAQKSGDATNYVLQQLSELGLASTYEEYKKLNPELFAQQEAQQQLTAALGELSIALTPLVTTVSEFLTDIVEWANKNIELVKSFDSISEGLTALMPQLLEQGINIIKNIIQGISNAVPLYISAVQQLIPLQIENMQKFLPDILQMGGQLLTTLLNGIVELIPLLIAQSVELTRIFINTISGHLPAIIRTGVDILLKLIDGIYKTIPQLVSMVATLIVKMISEFVRNLPQIIQMGGELILALIDGLVALIPKLLGIVWDIGSSIVDELSDVDWIGVGKNIIDGMVKGVKSVAGGLIESVTGVVDSAISGAKKLLGIASPSKVFKKFGVFTGEGYEIGMISQLDAISKASKKMVDASLPDIPNIRVPNVVDKQATTTQIKEGNTYNFYPQKAIFDERDVTREINRAVMLYG
SIO_010081: A9C19_RS21085
subclass of: SO_0000673
so part of: A9C19_RS21085
location: complement(11622..13736)
location: region:11622-13736:-1
so has part: feature:11622-13736:-1:exon

WP_072581989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11622-13736:-1:exon

A9C19_RS21090
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21090
old locus tag: A9C19_20720
so part of: sequence
location: complement(13821..13976)
location: region:13821-13976:-1
so has part: feature:13821-13976:-1:exon
subclass of: SO_0000010

position:13821:-1
position: 13821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13976:-1
position: 13976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13821-13976:-1:exon

A9C19_RS21090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21090
old locus tag: A9C19_20720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000717829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3954 domain-containing protein
translation: MSNLDLTKDGVYIVKDGECKRVTDPNSGFGKQTIVWQNGKVNHCEITFTEK
SIO_010081: A9C19_RS21090
subclass of: SO_0000673
so part of: A9C19_RS21090
location: complement(13821..13976)
location: region:13821-13976:-1
so has part: feature:13821-13976:-1:exon

WP_072581990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13821-13976:-1:exon

A9C19_RS21095
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21095
old locus tag: A9C19_20725
so part of: sequence
location: complement(13973..14332)
location: region:13973-14332:-1
so has part: feature:13973-14332:-1:exon
subclass of: SO_0000010

position:13973:-1
position: 13973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14332:-1
position: 14332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13973-14332:-1:exon

A9C19_RS21095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21095
old locus tag: A9C19_20725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYKTIRIDGKNVSFKGDKYITQLYRQELGRNFIKDFKSLRNVVKYNIVPMRSPIKDLKKVNFEALYLICWIFAKNADKSIGNSEEWLEEFEQFPILHVITELSEIIQFSLTGKTFKVVL
SIO_010081: A9C19_RS21095
subclass of: SO_0000673
so part of: A9C19_RS21095
location: complement(13973..14332)
location: region:13973-14332:-1
so has part: feature:13973-14332:-1:exon

WP_072581991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13973-14332:-1:exon

A9C19_RS21100
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21100
old locus tag: A9C19_20730
so part of: sequence
location: complement(14344..14787)
location: region:14344-14787:-1
so has part: feature:14344-14787:-1:exon
subclass of: SO_0000010

position:14344:-1
position: 14344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14787:-1
position: 14787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14344-14787:-1:exon

A9C19_RS21100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21100
old locus tag: A9C19_20730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMRPYEKEILRREMISLVYSYPYKVVPLSDDAKLAFALFNKQRGPIPPNAAEVIKKYLNLEKPPFIGQMSFYYDDPNESEDARMIMTKELAIKKMAECWVPGISHVDSLRKNSYPPLKEGSDFTIEVGKKIIHDQPLTLTFDDIKAL
SIO_010081: A9C19_RS21100
subclass of: SO_0000673
so part of: A9C19_RS21100
location: complement(14344..14787)
location: region:14344-14787:-1
so has part: feature:14344-14787:-1:exon

WP_072581992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14344-14787:-1:exon

A9C19_RS21105
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21105
old locus tag: A9C19_20735
so part of: sequence
location: complement(14784..15404)
location: region:14784-15404:-1
so has part: feature:14784-15404:-1:exon
subclass of: SO_0000010

position:14784:-1
position: 14784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15404:-1
position: 15404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14784-15404:-1:exon

A9C19_RS21105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21105
old locus tag: A9C19_20735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKLIDENQYFVESNKVIQVVLDNESLSEKKLKAADKLQLVKEQKTHTTSPEEYEELEMLEKELERKIRFNQLKYPAVPEDLRETVKRNAAVEQLEVDNTLNELKAELKDRVEYLESELLPLLDNIRKLESLKKVPDQIDFILKAEMGEGVSIPVSLMLRTLSPSNNEGQAGKALKDLNKTVASLKKIEVPVETKGLLDFLKRGKK
SIO_010081: A9C19_RS21105
subclass of: SO_0000673
so part of: A9C19_RS21105
location: complement(14784..15404)
location: region:14784-15404:-1
so has part: feature:14784-15404:-1:exon

WP_145925834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14784-15404:-1:exon

A9C19_RS21115
type: Gene
subclass of: SO_0000704
RO_0002162: 1547283
locus tag: A9C19_RS21115
old locus tag: A9C19_20745
so part of: sequence
location: complement(15803..16315)
location: region:15803-16315:-1
so has part: feature:15803-16315:-1:exon
subclass of: SO_0000010

position:15803:-1
position: 15803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16315:-1
position: 16315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15803-16315:-1:exon

A9C19_RS21115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1547283
locus tag: A9C19_RS21115
old locus tag: A9C19_20745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSEVFFAERFESYELSEYATARYWANKAIAERDEVIESLYDDCSPTITGCDYEEGRLFSVSTPVEDMAIMIIERKREYENMIQRYVSKAELFEIAMESLTDREREVIAIAYQGAKNDLGLSHNYFRQLLHQAEEKICSYLGELQHEKRIESNRLLKKQRKEKARVFQME
SIO_010081: A9C19_RS21115
subclass of: SO_0000673
so part of: A9C19_RS21115
location: complement(15803..16315)
location: region:15803-16315:-1
so has part: feature:15803-16315:-1:exon

WP_072581995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15803-16315:-1:exon