Rhizobium hidalgonense strain JKLM 19E plasmid pPR19E02, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Genome sequences of pea root nodulating Rhizobium spp.
Submitted (25-MAY-2020) National Centre for Microbial Resource, National Centre for Cell Science, First floor, Central Tower, Sai Trinity Building Garware Circle, Sutarwadi, Pune, Maharashtra 411021, India
Submitted (21-MAY-2019) National Centre for Microbial Resource, National Centre for Cell Science, First floor, Central Tower, Sai Trinity Building Garware Circle, Sutarwadi, Pune, Maharashtra 411021, India
REFSEQ INFORMATION: The reference sequence is identical to\nCP054029.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 18-MAY-2020\nAssembly Method :: Canu v. v. 2.0; bowtie2 v. v. 2.3.4.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 106.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 04:30:54\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,580\nCDSs (total) :: 6,517\nGenes (coding) :: 6,262\nCDSs (with protein) :: 6,262\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 255\nCDSs (without protein) :: 255\nPseudo Genes (ambiguous residues) :: 0 of 255\nPseudo Genes (frameshifted) :: 168 of 255\nPseudo Genes (incomplete) :: 135 of 255\nPseudo Genes (internal stop) :: 37 of 255\nPseudo Genes (multiple problems) :: 74 of 255\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_002967287.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003564086.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548916.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071055.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736618.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003564078.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564077.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012763320.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020053077.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763317.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574656.1
GO:0043295 - glutathione binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007627502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428066.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992130.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555238.1
COORDINATES: similar to AA sequence:RefSeq:WP_018497128.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018448506.1
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020052621.1
GO:0003824 - catalytic activity [Evidence IEA]
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003564058.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071088.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003564056.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246492.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003574686.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343031.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017996489.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_003594552.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071096.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003553934.1
sulfate/molybdate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018497142.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_008531845.1
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_012490583.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003594564.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564034.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627529.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071104.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052649.1
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_018448527.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_011655123.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_003594574.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428121.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448530.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968360.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564015.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003553906.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531876.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574728.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017968366.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004678060.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020397477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012067080.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018246524.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018483418.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555189.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555188.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563994.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018448545.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547822.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547824.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563987.1
COORDINATES: similar to AA sequence:RefSeq:WP_020487095.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009363822.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033296 - rhamnose binding [Evidence IEA]; GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO:0015762 - rhamnose transmembrane transport [Evidence IEA]
rhamnose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011655152.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003563981.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018246535.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547836.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003547838.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_003574767.1
GO:0019213 - deacetylase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
amidohydrolase/deacetylase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003547844.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246540.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010968496.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012555172.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563964.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563963.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555169.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574779.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003547852.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563959.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763256.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996455.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958041.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003594646.1
COORDINATES: similar to AA sequence:RefSeq:WP_004669097.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448564.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052695.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563948.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574806.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490631.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428184.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052701.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655175.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018495201.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763242.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003547890.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246564.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_018483448.1
invasion associated locus B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246566.1
GO:0046930 - pore complex [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
GO:0006811 - monoatomic ion transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_017968404.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563922.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563920.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246569.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611363.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003547928.1
COORDINATES: similar to AA sequence:RefSeq:WP_003547934.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672413.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448592.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531968.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448594.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968418.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008531977.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627660.1
GO:0004037 - allantoicase activity [Evidence IEA]; GO:0071522 - ureidoglycine aminohydrolase activity [Evidence IEA]
GO:0010136 - ureide catabolic process [Evidence IEA]
bifunctional allantoicase/(S)-ureidoglycine aminohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003574842.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736710.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594680.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555127.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672424.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018496104.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574853.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517405.1
COORDINATES: similar to AA sequence:RefSeq:WP_014532069.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046916.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003562388.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594711.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046913.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444720.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480358.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563862.1
COORDINATES: similar to AA sequence:RefSeq:WP_020046908.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627753.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563858.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563856.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574875.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967613.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0009712 - catechol-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020046994.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018506 - maleylacetate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011594776.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550799.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480284.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555100.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003574886.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550755.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755658.1
COORDINATES: similar to AA sequence:RefSeq:WP_017963276.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563837.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516773.1
COORDINATES: similar to AA sequence:RefSeq:WP_020665203.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516760.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888092.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967623.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755641.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245661.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967626.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018071394.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563825.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563822.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003574900.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996951.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547968.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563817.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483478.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012490663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428221.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531281.1
COORDINATES: similar to AA sequence:RefSeq:WP_018097033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627909.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563791.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017996936.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490674.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052773.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968440.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968441.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018448642.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736732.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004110897.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052779.1
COORDINATES: similar to AA sequence:RefSeq:WP_018485860.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003594816.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548045.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555056.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246110.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594822.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563768.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555051.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003563766.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574966.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968455.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_011428253.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015342994.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486503.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957697.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003550946.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555748.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018482183.1
COORDINATES: similar to AA sequence:RefSeq:WP_003536400.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018482185.1
COORDINATES: similar to AA sequence:RefSeq:WP_018234617.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095525.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555042.1
COORDINATES: similar to AA sequence:RefSeq:WP_018066164.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563744.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957701.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428260.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_003506498.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548119.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548122.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003574998.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448675.1
COORDINATES: similar to AA sequence:RefSeq:WP_004123520.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012649944.1
dimethylamine monooxygenase subunit DmmA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013844968.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246141.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575008.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015343853.1
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007607535.1
COORDINATES: similar to AA sequence:RefSeq:WP_012707985.1
glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017968483.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007628013.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531404.1
GO:0008115 - sarcosine oxidase activity [Evidence IEA]
GO:0046653 - tetrahydrofolate metabolic process [Evidence IEA]
sarcosine oxidase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017957716.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548153.1
sarcosine oxidase subunit alpha family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016736759.1
sarcosine oxidase subunit gamma family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011427681.1
COORDINATES: similar to AA sequence:RefSeq:WP_009044753.1
COORDINATES: similar to AA sequence:RefSeq:WP_014765040.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563695.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
RNA repair transcriptional activator RtcR
COORDINATES: similar to AA sequence:RefSeq:WP_012490716.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957720.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020049953.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563687.1
COORDINATES: similar to AA sequence:RefSeq:WP_007787997.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563683.1
COORDINATES: similar to AA sequence:RefSeq:WP_017960473.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017960472.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539697.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020049947.1
COORDINATES: similar to AA sequence:RefSeq:WP_018484816.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531423.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763633.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548168.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968491.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012763631.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563671.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628064.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957727.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763627.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548183.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548185.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246161.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448696.1
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246167.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003559202.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563658.1
COORDINATES: protein motif:HMM:NF025569.2
COORDINATES: protein motif:HMM:NF033580.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003563656.1
GH32 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003575070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428210.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755191.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677515.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480414.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018496088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655303.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563639.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_018898266.1
COORDINATES: similar to AA sequence:RefSeq:WP_003546392.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575092.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563629.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563626.1
COORDINATES: similar to AA sequence:RefSeq:WP_011652498.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563622.1
COORDINATES: similar to AA sequence:RefSeq:WP_017963259.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548196.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763620.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548198.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003594942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655314.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397511.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563614.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555403.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494496.1
GO:0004671 - protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [Evidence IEA]
GO:0006481 - C-terminal protein methylation [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003575125.1
GO:0098024 - virus tail, fiber [Evidence IEA]
GO:0046718 - viral entry into host cell [Evidence IEA]; GO:0019062 - virion attachment to host cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018482235.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009364769.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575132.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763606.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991975.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071614.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563602.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763602.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575145.1
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003563596.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012555392.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017968530.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052864.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490734.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016736777.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736778.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991957.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052868.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052869.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548270.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563572.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_016736785.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655351.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482262.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020052875.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011655354.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0019250 - aerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575180.1
GO:0043819 - precorrin-6A synthase (deacetylating) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555375.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628179.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996850.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246224.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628184.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575194.1
COORDINATES: similar to AA sequence:RefSeq:WP_003553464.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968553.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011654772.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548308.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548310.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531552.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071573.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_003595021.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575209.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957788.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494447.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548324.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957791.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548350.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595032.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069850.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563531.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563530.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563528.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007822601.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575219.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052912.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548363.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003539912.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563518.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763555.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_016557555.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_012763554.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_018448778.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575233.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555344.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004679746.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071539.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563494.1
COORDINATES: similar to AA sequence:RefSeq:WP_003574341.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555340.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563488.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004679752.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018482599.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490432.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595069.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246262.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548396.1
COORDINATES: similar to AA sequence:RefSeq:WP_003553531.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654809.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531626.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246267.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991890.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517801.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052940.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563451.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003563449.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427911.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736531.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627313.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555316.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627317.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003574379.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007627321.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018897896.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555311.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968239.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018448815.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548455.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494398.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_020052958.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003563421.1
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007691826.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007627334.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018482638.1
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]; GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448821.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563411.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991861.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563407.1
COORDINATES: similar to AA sequence:RefSeq:WP_008531683.1
COORDINATES: similar to AA sequence:RefSeq:WP_003548645.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012490464.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957871.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427929.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531694.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018448832.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003563391.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008531697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427935.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555285.1
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007795665.1
COORDINATES: similar to AA sequence:RefSeq:WP_007536094.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563375.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736560.1
COORDINATES: similar to AA sequence:RefSeq:WP_018482982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654969.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563367.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563365.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957889.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069866.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012763407.1
COORDINATES: similar to AA sequence:RefSeq:WP_004669754.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563356.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019858718.1
COORDINATES: similar to AA sequence:RefSeq:WP_003563350.1
COORDINATES: similar to AA sequence:RefSeq:WP_010006063.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053007.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654990.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595176.1
COORDINATES: similar to AA sequence:RefSeq:WP_018858450.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654993.1
COORDINATES: similar to AA sequence:RefSeq:WP_020486265.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483016.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957905.1
COORDINATES: similar to AA sequence:RefSeq:WP_018497059.1
COORDINATES: similar to AA sequence:RefSeq:WP_007789329.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444441.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480204.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018898111.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564102.1
COORDINATES: similar to AA sequence:RefSeq:WP_003564101.1
COORDINATES: similar to AA sequence:RefSeq:WP_018493549.1
COORDINATES: similar to AA sequence:RefSeq:WP_012828143.1
COORDINATES: similar to AA sequence:RefSeq:WP_019615394.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793865.1
COORDINATES: similar to AA sequence:RefSeq:WP_004669994.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS3-like element ISRle4 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_003554070.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555260.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053049.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448475.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071047.1
COORDINATES: similar to AA sequence:RefSeq:WP_020053052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655028.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_018497112.1
IclR family transcriptional regulator C-terminal domain-containing protein