Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Genomic insights into the origins and evolution of symbiotic genes in the Phaseolus vulgaris microsymbionts
Submitted (08-JAN-2019) College of Life Sciences, Northwest A&F University, No.3 Taicheng Road, Yangling, Shaanxi 712100, China
Submitted (13-SEP-2017) College of Life Sciences, Northwest A&F University, No. 3 Taicheng Road, Yangling, Shaanxi 712100, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP035002.1.\nBacteria and source DNA available from State Key Laboratory of Crop\nStress Biology in Arid Areas, College of Life Sciences, Northwest\nA&F University.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. 2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 170.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 06:06:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,223\nCDSs (total) :: 7,160\nGenes (coding) :: 6,810\nCDSs (with protein) :: 6,810\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 350\nCDSs (without protein) :: 350\nPseudo Genes (ambiguous residues) :: 0 of 350\nPseudo Genes (frameshifted) :: 234 of 350\nPseudo Genes (incomplete) :: 203 of 350\nPseudo Genes (internal stop) :: 49 of 350\nPseudo Genes (multiple problems) :: 118 of 350\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_003574475.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003595907.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595908.1
COORDINATES: similar to AA sequence:RefSeq:WP_018516974.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003595910.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595911.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760297.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018068081.1
GO:0006457 - protein folding [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012489415.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736007.1
COORDINATES: similar to AA sequence:RefSeq:WP_008829278.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595409.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595410.1
CGNR zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595412.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735488.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017266629.1
COORDINATES: similar to AA sequence:RefSeq:WP_012558196.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555359.1
GO:0055085 - transmembrane transport [Evidence IEA]
low affinity iron permease family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611203.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007426906.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595419.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595424.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003547726.1
COORDINATES: similar to AA sequence:RefSeq:WP_007758851.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595428.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595430.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018071370.1
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012755664.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018480311.1
COORDINATES: similar to AA sequence:RefSeq:WP_020665201.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555744.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010967020.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970797.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010975503.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_076611189.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003581016.1
COORDINATES: similar to AA sequence:RefSeq:WP_003554240.1
COORDINATES: similar to AA sequence:RefSeq:WP_003554242.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899589.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012556079.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555013.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003595433.1
COORDINATES: similar to AA sequence:RefSeq:WP_004673664.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737456.1
COORDINATES: similar to AA sequence:RefSeq:WP_018237787.1
COORDINATES: protein motif:HMM:NF017243.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612137.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012554517.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576948.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576949.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595441.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760726.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012489500.1
Ti-type conjugative transfer system protein TraG
COORDINATES: similar to AA sequence:RefSeq:WP_012490309.1
COORDINATES: similar to AA sequence:RefSeq:WP_007636139.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053391.1
Ti-type conjugative transfer relaxase TraA
COORDINATES: similar to AA sequence:RefSeq:WP_003571602.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008529726.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_017958120.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008529720.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246076.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595453.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246074.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595457.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595459.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246071.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595462.1
COORDINATES: protein motif:HMM:NF016925.2
COORDINATES: similar to AA sequence:RefSeq:WP_003554738.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735398.1
GO:0016787 - hydrolase activity [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011424925.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003555392.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_018065756.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007006874.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595464.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957137.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957141.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595473.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595475.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595477.1
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
tyrosine-protein kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018493935.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483893.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571745.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969301.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483897.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003576814.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012560044.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576819.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560042.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560041.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549405.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018493924.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008532368.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018493922.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957532.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012560036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004673257.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649681.1
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012560033.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246617.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246618.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635838.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007818632.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
peptidase domain-containing ABC transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003595519.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003576857.1
COORDINATES: similar to AA sequence:RefSeq:WP_017996527.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020087400.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013949025.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018390452.1
COORDINATES: similar to AA sequence:RefSeq:WP_020178730.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010915867.1
COORDINATES: similar to AA sequence:RefSeq:WP_018390455.1
COORDINATES: similar to AA sequence:RefSeq:WP_018390456.1
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012753303.1
COORDINATES: similar to AA sequence:RefSeq:WP_007689241.1
GO:1990107 - thiazole synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017958428.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595533.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012560019.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003571692.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595542.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_008524000.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560015.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595545.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560013.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007635604.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595549.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595550.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595551.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560009.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003572023.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576418.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003576420.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246929.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017969166.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012560003.1
COORDINATES: similar to AA sequence:RefSeq:WP_015241345.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572011.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047725.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992354.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576433.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246945.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012559994.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595607.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003549335.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004677331.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957505.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595611.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012559990.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020047714.1
COORDINATES: similar to AA sequence:RefSeq:WP_018484136.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018496189.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997178.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595622.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560177.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003549301.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_003595628.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957492.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969194.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549292.1
COORDINATES: similar to AA sequence:RefSeq:WP_018484151.1
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006020 - inositol metabolic process [Evidence IEA]; GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003549271.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560170.1
COORDINATES: similar to AA sequence:RefSeq:WP_018209689.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246979.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975878.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595646.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549263.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595651.1
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_003595653.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018448971.1
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
SfnB family sulfur acquisition oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007637355.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595657.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560163.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018484172.1
COORDINATES: similar to AA sequence:RefSeq:WP_018896874.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_017957455.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595665.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549253.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489760.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595670.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017969227.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_017992313.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595675.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595677.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560152.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997210.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018484182.1
COORDINATES: similar to AA sequence:RefSeq:WP_018247001.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069333.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571910.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560147.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760031.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637331.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448955.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649788.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735528.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448952.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595702.1
GbsR/MarR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012760022.1
GO:0055051 - ATP-binding cassette (ABC) transporter complex, integrated substrate binding [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0033230 - ABC-type cysteine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0033228 - cysteine export across plasma membrane [Evidence IEA]
thiol reductant ABC exporter subunit CydD
COORDINATES: similar to AA sequence:RefSeq:WP_020047645.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069321.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018496134.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_017957645.1
COORDINATES: similar to AA sequence:RefSeq:WP_018241018.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009044753.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011427681.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047641.1
COORDINATES: similar to AA sequence:RefSeq:WP_017969248.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760015.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595714.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649802.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549191.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00442
guanidine-I (ykkC/yxkD leader) riboswitch; Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; This is class of guanidine riboswitches is based on the ykkC/yxkD leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_018496130.1
putative urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017957639.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997231.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018247024.1
urea carboxylase-associated family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018496126.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957635.1
GO:0004847 - urea carboxylase activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017992291.1
GO:0004039 - allophanate hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008529908.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571879.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529912.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957630.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012560117.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003549175.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571872.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018496119.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012759995.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957624.1
COORDINATES: similar to AA sequence:RefSeq:WP_012759993.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007637243.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560110.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576622.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571859.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595755.1
COORDINATES: similar to AA sequence:RefSeq:WP_012560106.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576212.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551734.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020180174.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018445089.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003591720.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591721.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967977.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555492.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012555493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555494.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577871.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555496.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555497.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555499.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572347.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007634601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004692492.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555503.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523093.1
4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003577054.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555506.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006191520.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555508.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555509.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495606.1
Tm-1-like ATP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555511.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012555512.1
COORDINATES: similar to AA sequence:RefSeq:WP_004687624.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397624.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976309.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188606.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_015342796.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006150636.1
GO:0018480 - 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity [Evidence IEA]
GO:1901023 - 4-hydroxyphenylacetate catabolic process [Evidence IEA]
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002967138.1
GO:0008687 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase activity [Evidence IEA]
3,4-dihydroxyphenylacetate 2,3-dioxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_018013119.1
GO:0009013 - succinate-semialdehyde dehydrogenase [NAD(P)+] activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
NADP-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012555519.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577036.1
GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate hydratase activity [Evidence IEA]
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
COORDINATES: similar to AA sequence:RefSeq:WP_002975851.1
GO:0018802 - 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008509277.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004110698.1
MoaF C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018073589.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555525.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495594.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550310.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555528.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_017968742.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555530.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968744.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005977065.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555533.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555534.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
homoprotocatechuate degradation operon regulator HpaR
COORDINATES: similar to AA sequence:RefSeq:WP_003538579.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992592.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003577851.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003572337.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003538570.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047910.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012555541.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555542.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555544.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555545.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016735961.1
GO:0015414 - ABC-type nitrate transporter activity [Evidence IEA]
GO:0015706 - nitrate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006699924.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634571.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654375.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992578.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486132.1
COORDINATES: similar to AA sequence:RefSeq:WP_018855620.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003576343.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760695.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576346.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649278.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018238623.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449122.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992561.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427744.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007812009.1
GO:0018467 - formaldehyde dehydrogenase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
formaldehyde dehydrogenase, glutathione-independent
COORDINATES: similar to AA sequence:RefSeq:WP_011427747.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555563.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591785.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003555528.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674672.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_018496290.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674674.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538494.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654404.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800110.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529974.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047865.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342956.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012555572.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538486.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737051.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591805.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003572273.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538478.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003591812.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529987.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572268.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047854.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486094.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008529995.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007634472.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654420.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427775.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958202.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591832.1
COORDINATES: similar to AA sequence:RefSeq:WP_018070691.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047845.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968684.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968685.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538447.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654429.1
sodium:solute symporter family monocarboxylate transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018517713.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654431.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591847.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654435.1
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018070680.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538438.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018246862.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555597.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555598.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_017991285.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018246864.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572243.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427794.1
COORDINATES: similar to AA sequence:RefSeq:WP_008530030.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572238.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572236.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997593.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577731.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737019.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538424.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449072.1
COORDINATES: similar to AA sequence:RefSeq:WP_002965659.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760647.1
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016737014.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519616.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449065.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958229.1
COORDINATES: similar to AA sequence:RefSeq:WP_018237067.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737009.1
COORDINATES: similar to AA sequence:RefSeq:WP_014329384.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737007.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737006.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958235.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555604.1
GO:0047443 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity [Evidence IEA]
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_003555460.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577717.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018449058.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007812555.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427810.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572206.1
nitrogen assimilation transcriptional regulator NAC
COORDINATES: similar to AA sequence:RefSeq:WP_003572205.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003591879.1
GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020047819.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007752136.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555610.1
COORDINATES: similar to AA sequence:RefSeq:WP_004670892.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012555612.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018246892.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555617.1
COORDINATES: similar to AA sequence:RefSeq:WP_018070648.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020047814.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591896.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958253.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486055.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736987.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555441.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538368.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572169.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538358.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760628.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011654469.1
aldo/keto reductase family oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018449039.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496342.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003572153.1
COORDINATES: similar to AA sequence:RefSeq:WP_018857293.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017968822.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555201.1
COORDINATES: similar to AA sequence:RefSeq:WP_003555203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555626.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968902.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012760613.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_011654479.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047788.1
COORDINATES: similar to AA sequence:RefSeq:WP_018449032.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538341.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654483.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634325.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591935.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736962.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496354.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047778.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246921.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654579.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071681.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538323.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427859.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427628.1
COORDINATES: similar to AA sequence:RefSeq:WP_008530137.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523062.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634987.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047767.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012556313.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698102.1
amino acid ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017997715.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572500.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556317.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654265.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018446123.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591575.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997708.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246696.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736945.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997705.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958302.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634964.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654268.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071749.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736938.1
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012556326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427645.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591588.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015411 - ABC-type taurine transporter transporter activity [Evidence IEA]; GO:0030977 - taurine binding [Evidence IEA]
GO:0015734 - taurine transport [Evidence IEA]
taurine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016736934.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736933.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634950.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483087.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992528.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736929.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446106.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577602.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071762.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572458.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556340.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047999.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992524.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007817024.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577591.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577589.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591622.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591624.1
COORDINATES: similar to AA sequence:RefSeq:WP_006202785.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591628.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004676674.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003591633.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047996.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591637.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591639.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591641.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494028.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003591643.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591644.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071775.1
COORDINATES: similar to AA sequence:RefSeq:WP_018446100.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958335.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
family 78 glycoside hydrolase catalytic domain
COORDINATES: similar to AA sequence:RefSeq:WP_003591651.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577549.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483041.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591674.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007634835.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555452.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018493990.1
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003538619.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017958363.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012555455.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004675898.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634817.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047944.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736874.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591698.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012092549.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047940.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018071836.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007634806.1
GO:0006096 - glycolytic process [Evidence IEA]
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011427700.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017997287.1
COORDINATES: similar to AA sequence:RefSeq:WP_012759958.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992440.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003571855.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_017997061.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595767.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595769.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997064.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649592.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017969330.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595777.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549565.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003595780.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637215.1
COORDINATES: similar to AA sequence:RefSeq:WP_002711250.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595784.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397458.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549551.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649602.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595795.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735694.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047587.1
COORDINATES: similar to AA sequence:RefSeq:WP_014763132.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595802.1
COORDINATES: similar to AA sequence:RefSeq:WP_018856437.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735982.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595808.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637186.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637185.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012759896.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246651.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595818.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496231.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997087.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637176.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735686.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595825.1
COORDINATES: similar to AA sequence:RefSeq:WP_012759889.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496227.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576683.1
COORDINATES: similar to AA sequence:RefSeq:WP_018070805.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047575.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246165.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595834.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448697.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012560070.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_018484100.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595840.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549488.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018246672.1
COORDINATES: similar to AA sequence:RefSeq:WP_020665211.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571772.1
COORDINATES: similar to AA sequence:RefSeq:WP_003549484.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595851.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760159.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018484110.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012760350.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595858.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012560060.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974312.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595863.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595865.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595866.1
COORDINATES: similar to AA sequence:RefSeq:WP_012489858.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595870.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957564.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003571757.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576733.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427511.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004673166.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595882.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595884.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595886.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735660.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595890.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595891.1
COORDINATES: similar to AA sequence:RefSeq:WP_017957120.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551488.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735655.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595898.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595900.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012489837.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637126.1
COORDINATES: similar to AA sequence:RefSeq:WP_007637125.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674023.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735418.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735419.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735420.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735651.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008533017.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576750.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556099.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591049.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591051.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556100.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591057.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_003571753.1
COORDINATES: similar to AA sequence:RefSeq:WP_012482177.1
COORDINATES: similar to AA sequence:RefSeq:WP_018096452.1
COORDINATES: similar to AA sequence:RefSeq:WP_003565354.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556103.1
COORDINATES: similar to AA sequence:RefSeq:WP_003576766.1
COORDINATES: similar to AA sequence:RefSeq:WP_012763377.1
COORDINATES: protein motif:HMM:NF014305.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_003591072.1
COORDINATES: similar to AA sequence:RefSeq:WP_011424426.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003591076.1
COORDINATES: similar to AA sequence:RefSeq:WP_016558830.1
COORDINATES: similar to AA sequence:RefSeq:WP_011655063.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
HWE histidine kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018068093.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517417.1
COORDINATES: similar to AA sequence:RefSeq:WP_014878829.1
COORDINATES: similar to AA sequence:RefSeq:WP_014878828.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004677006.1
COORDINATES: similar to AA sequence:RefSeq:WP_007533288.1
COORDINATES: similar to AA sequence:RefSeq:WP_006203965.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_006203970.1
COORDINATES: similar to AA sequence:RefSeq:WP_010914926.1
COORDINATES: similar to AA sequence:RefSeq:WP_006203972.1
COORDINATES: similar to AA sequence:RefSeq:WP_019966713.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965518.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965517.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009573227.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019965515.1
COORDINATES: similar to AA sequence:RefSeq:WP_053111714.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965513.1
COORDINATES: similar to AA sequence:RefSeq:WP_019463131.1
COORDINATES: similar to AA sequence:RefSeq:WP_013973861.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649073.1
COORDINATES: similar to AA sequence:RefSeq:WP_018071331.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524020.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537402.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007789295.1
COORDINATES: similar to AA sequence:RefSeq:WP_003591660.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008524011.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524009.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537392.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524004.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427447.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551594.1
COORDINATES: similar to AA sequence:RefSeq:WP_018069797.1
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018245370.1
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018245369.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019092033.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760577.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690712.1
COORDINATES: similar to AA sequence:RefSeq:WP_016845141.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003573486.1
COORDINATES: similar to AA sequence:RefSeq:WP_003573488.1
COORDINATES: similar to AA sequence:RefSeq:WP_018066164.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016736158.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736159.1
COORDINATES: similar to AA sequence:RefSeq:WP_010017635.1
COORDINATES: protein motif:HMM:NF017934.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515865.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693942.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575395.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_011428433.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_006315786.1
COORDINATES: similar to AA sequence:RefSeq:WP_003577113.1
COORDINATES: similar to AA sequence:RefSeq:WP_011975455.1
COORDINATES: similar to AA sequence:RefSeq:WP_003567909.1
COORDINATES: similar to AA sequence:RefSeq:WP_007534592.1
COORDINATES: similar to AA sequence:RefSeq:WP_016735587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
COORDINATES: similar to AA sequence:RefSeq:WP_009797884.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011970904.1
COORDINATES: similar to AA sequence:RefSeq:WP_003584387.1
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: similar to AA sequence:RefSeq:WP_011970783.1
COORDINATES: similar to AA sequence:RefSeq:WP_018074077.1
COORDINATES: similar to AA sequence:RefSeq:WP_018242661.1
COORDINATES: similar to AA sequence:RefSeq:WP_012558106.1
COORDINATES: similar to AA sequence:RefSeq:WP_016736104.1
COORDINATES: similar to AA sequence:RefSeq:WP_018115014.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428448.1
COORDINATES: similar to AA sequence:RefSeq:WP_017959395.1
COORDINATES: similar to AA sequence:RefSeq:WP_016732811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490179.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760351.1
COORDINATES: similar to AA sequence:RefSeq:WP_017991112.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_008840457.1
COORDINATES: similar to AA sequence:RefSeq:WP_015341796.1
COORDINATES: similar to AA sequence:RefSeq:WP_018329051.1
COORDINATES: similar to AA sequence:RefSeq:WP_018329052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011896448.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017961877.1
COORDINATES: similar to AA sequence:RefSeq:WP_008120586.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594337.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003594335.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008120589.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594331.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594330.1
COORDINATES: similar to AA sequence:RefSeq:WP_003594329.1
COORDINATES: similar to AA sequence:RefSeq:WP_010017895.1
COORDINATES: similar to AA sequence:RefSeq:WP_003530441.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012556062.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_020472995.1
COORDINATES: similar to AA sequence:RefSeq:WP_007627851.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014531639.1
COORDINATES: similar to AA sequence:RefSeq:WP_003590950.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018068085.1
COORDINATES: similar to AA sequence:RefSeq:WP_014989994.1
COORDINATES: similar to AA sequence:RefSeq:WP_019565689.1
COORDINATES: similar to AA sequence:RefSeq:WP_018494858.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003555376.1
COORDINATES: similar to AA sequence:RefSeq:WP_003572075.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: protein motif:HMM:NF033808.0
GO:0006825 - copper ion transport [Evidence IEA]
copper homeostasis membrane protein CopD
COORDINATES: similar to AA sequence:RefSeq:WP_007701140.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_018115922.1
COORDINATES: similar to AA sequence:RefSeq:WP_003545294.1
COORDINATES: similar to AA sequence:RefSeq:WP_017997396.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760465.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: similar to AA sequence:RefSeq:WP_012755612.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483020.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_003549623.1
COORDINATES: similar to AA sequence:RefSeq:WP_003551274.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595902.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013891366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006023664.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003595903.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517664.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397402.1