Kozakia baliensis strain NBRC 16680 plasmid pKB16680_5.
type: Entry
definition: Kozakia baliensis strain NBRC 16680 plasmid pKB16680_5.
sequence version: NZ_CP014686.1
sequence date: 2023-03-26
sequence: sequence
division: CON
label: NZ_CP014686.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04396915
keyword: RefSeq
source: Kozakia baliensis
organism: Kozakia baliensis
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Kozakia.
reference: 1
references: 27716345
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP014686.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 1\nAssembly Name :: TMW2.1340_1\nLong Assembly Name :: Kozakia baliensis NBRC16680_1\nGenome Coverage :: 72\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 17:05:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,988\nCDSs (total) :: 2,912\nGenes (coding) :: 2,845\nCDSs (with protein) :: 2,845\nGenes (RNA) :: 76\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 67\nCDSs (without protein) :: 67\nPseudo Genes (ambiguous residues) :: 0 of 67\nPseudo Genes (frameshifted) :: 25 of 67\nPseudo Genes (incomplete) :: 54 of 67\nPseudo Genes (internal stop) :: 13 of 67\nPseudo Genes (multiple problems) :: 21 of 67\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 11848
topology: linear
so has quality: SO_0000987
location: 1..11848
location: region:1-11848:1
RO_0002162: 153496

NZ_CP014686
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04396915
type: BioSample
SIO_000068: biosample

1
title: Dissection of exopolysaccharide biosynthesis in Kozakia baliensis
author: Brandt, J.U.
author: Jakob, F.
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Microb Cell Fact 15 (1), 170 (2016)
pubmed: 27716345
comments: Publication Status: Online-Only

27716345
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Brandt, J.
author: Jakob, F.
author: Vogel, R.F.
journal: Submitted (08-MAR-2016) Technische Mikrobiologie, Technische Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11848:1
position: 11848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-11848:1:source
so part of: sequence
organism: Kozakia baliensis
mol type: genomic DNA
strain: NBRC 16680
isolation source: Ragi
culture collection: NBRC:16680
plasmid: pKB16680_5
country: Indonesia: Yogyakarta
collection date: 1996

153496
type: Taxonomy
SIO_000068: taxonomy

A0U90_RS14635
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14635
old locus tag: A0U90_14625
so part of: sequence
location: 254..1288
location: region:254-1288:1
so has part: feature:254-1288:1:exon
subclass of: SO_0000010

position:254:1
position: 254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288:1
position: 1288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254-1288:1:exon

A0U90_RS14635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14635
old locus tag: A0U90_14625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019092244.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTTQQTLIGLDIAKNVFQAHAVDETGRCVFKRKLGRSEVASFFDALLPCRVVLEACATSHYWARIIRQHGHEVALVPPEAAKAFVRKGKKNDAIDAAAICAAALHPDTRYVPVKAEEQQSILSLHSARALLIKQQTMVVNALRALAAEFGIVAPRGTGKLDALMATIATAELPETMKQVAETLFQQFSTLRDKVSRLEARIEAHARTDEDARRLTSVPGIGPVTASMIVASVTDIGAFGSARQFAAWLGLVPRQHSTGGKPRLGRITKAGNREIRTLLVLGATSMIYRAPRWQSVAGAWLRGLLERRPARLATIALANKTARIVWALLSRKEVYSPRGRHAVPA
SIO_010081: A0U90_RS14635
subclass of: SO_0000673
so part of: A0U90_RS14635
location: 254..1288
location: region:254-1288:1
so has part: feature:254-1288:1:exon

WP_070406255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254-1288:1:exon

A0U90_RS15735
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS15735
pseudo: true
so part of: sequence
location: complement(<1783..2492)
location: region:1783-2492:-1
so has part: feature:1783-2492:-1:exon
subclass of: SO_0000010

position:1783:-1
position: 1783
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2492:-1
position: 2492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783-2492:-1:exon

A0U90_RS15735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS15735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558243.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: A0U90_RS15735
subclass of: SO_0000673
so part of: A0U90_RS15735
location: complement(<1783..2492)
location: region:1783-2492:-1
so has part: feature:1783-2492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1783-2492:-1:exon

A0U90_RS15735
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 153496
locus tag: A0U90_RS15735
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: A0U90_RS15735
subclass of: SO_0000673
so part of: A0U90_RS15735
location: complement(2098..2214)
location: region:2098-2214:-1
so has part: feature:2098-2214:-1:exon

position:2098:-1
position: 2098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214:-1
position: 2214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098-2214:-1:exon

A0U90_RS14650
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14650
old locus tag: A0U90_14640
so part of: sequence
location: complement(2612..3028)
location: region:2612-3028:-1
so has part: feature:2612-3028:-1:exon
subclass of: SO_0000010

position:2612:-1
position: 2612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028:-1
position: 3028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612-3028:-1:exon

A0U90_RS14650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14650
old locus tag: A0U90_14640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003618666.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKVLLDTHALLWWLSDSDRLGETAREIIADPVHDILVSIVSLWEIAIKIRIGKLDADMNDILAAIPEEGFSLLQIQPEHLQILMSLPLHHRDPFDHLLMAQAQAEHATFLSEDGQMDHYPSREYAVREAETAFRTRLI
SIO_010081: A0U90_RS14650
subclass of: SO_0000673
so part of: A0U90_RS14650
location: complement(2612..3028)
location: region:2612-3028:-1
so has part: feature:2612-3028:-1:exon

WP_070406256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2612-3028:-1:exon

A0U90_RS14655
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14655
old locus tag: A0U90_14645
so part of: sequence
location: complement(3025..3363)
location: region:3025-3363:-1
so has part: feature:3025-3363:-1:exon
subclass of: SO_0000010

position:3025:-1
position: 3025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3363:-1
position: 3363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025-3363:-1:exon

A0U90_RS14655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14655
old locus tag: A0U90_14645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prevent-host-death protein
translation: MPQEFSTSSLCVHVMMTHGEETMSQHLSDNAPLPQKIGVREFRGNLTAYLRQVRQGSTILVTSHDQVVAELRPPASSYRPRRQPGALRGRIRISEDFDETPPDLLESMERDL
SIO_010081: A0U90_RS14655
subclass of: SO_0000673
so part of: A0U90_RS14655
location: complement(3025..3363)
location: region:3025-3363:-1
so has part: feature:3025-3363:-1:exon

WP_010512391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3025-3363:-1:exon

A0U90_RS14660
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14660
old locus tag: A0U90_14650
so part of: sequence
location: complement(3372..4010)
location: region:3372-4010:-1
so has part: feature:3372-4010:-1:exon
subclass of: SO_0000010

position:3372:-1
position: 3372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4010:-1
position: 4010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3372-4010:-1:exon

A0U90_RS14660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14660
old locus tag: A0U90_14650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813326.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEKKTRFPSPTLKAAVPWNAGKMVGAKRALKEKHVWAIRFWLGSEQRIRDKALFDLALDSKLRGCDLVSLRIGDIVTSGQVRHRAMVVQQKTRRPVQFEITETTRESVRAWLEHRGGALNEYVFPSRLSAKAHLSTRQYARLLDQWVQAVGLIAGEYGTHSLRRTKVAMIYKRTGNIRAVQILLGHSKLDSTVRYLGVDVEDALALSEATDL
SIO_010081: A0U90_RS14660
subclass of: SO_0000673
so part of: A0U90_RS14660
location: complement(3372..4010)
location: region:3372-4010:-1
so has part: feature:3372-4010:-1:exon

WP_070406257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3372-4010:-1:exon

A0U90_RS14670
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14670
old locus tag: A0U90_14660
so part of: sequence
location: complement(4308..4991)
location: region:4308-4991:-1
so has part: feature:4308-4991:-1:exon
subclass of: SO_0000010

position:4308:-1
position: 4308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4991:-1
position: 4991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4308-4991:-1:exon

A0U90_RS14670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14670
old locus tag: A0U90_14660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019089619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YoaK family protein
translation: MPSSILPVSISARRVFILALVAGYVDALSFVDLGGVFAGAMTGNTTHMGASFISGNWHHGLLLVGVLGVFFLAAILSGLMRLLWSPAYGVMVMTIFMVLAQIVHGSSLRYWGEFLVLPALLAVQGETIAKFSGTPMPTIVVTTNLLKAASGIAEWVASCLAPDRNTRPVAGSIFLPLLLWGAFLAGVMAAAMGLALHGSFPFLWPVPLLVFLYRDIWKTERAGQDDN
SIO_010081: A0U90_RS14670
subclass of: SO_0000673
so part of: A0U90_RS14670
location: complement(4308..4991)
location: region:4308-4991:-1
so has part: feature:4308-4991:-1:exon

WP_070406259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4308-4991:-1:exon

A0U90_RS14675
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14675
old locus tag: A0U90_14665
so part of: sequence
location: complement(4991..6253)
location: region:4991-6253:-1
so has part: feature:4991-6253:-1:exon
subclass of: SO_0000010

position:6253:-1
position: 6253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4991-6253:-1:exon

A0U90_RS14675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14675
old locus tag: A0U90_14665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010516402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:proton antiporter
translation: MDTISLLALLLTFSAGFSILNHHTLRVPVTIGVLVFSLLTSLLVMILNPLIPAYDLQALPRSVLGAINLPAALLNGALSLLLFAGAMQVNVGHLRAKLMSVTALSILGTVLAVAFLAVAAWCVFPFLGHAVPFTWCIVLGAILAPTDPVSVVGMLKRLGLPGPIQAVFAGESLFNDGVGVVIFGVTIGLATGDSQGVGASEIAMSFCREALGGGLLGAITGWIALRVLKAQRDPHIDLLTSLALATGTFSIANQLGMSGAIAVVVAGLCFGTSYSHSIFDEVSRKELDIAWTLIDEVLNVLLFMLIGFEILEITPHLFTVLATLAVIPLSIAVRALSVLFSTLPVHLRQWERGRVLGILTWGGLRGGISVSLALGLPPGDLRDLLLPVCYGVVVFTIIVQGLTMERVARRLYPSIVSRSQ
SIO_010081: A0U90_RS14675
subclass of: SO_0000673
so part of: A0U90_RS14675
location: complement(4991..6253)
location: region:4991-6253:-1
so has part: feature:4991-6253:-1:exon

WP_070406260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4991-6253:-1:exon

A0U90_RS14680
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14680
old locus tag: A0U90_14670
so part of: sequence
location: complement(6387..8573)
location: region:6387-8573:-1
so has part: feature:6387-8573:-1:exon
subclass of: SO_0000010

position:6387:-1
position: 6387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8573:-1
position: 8573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387-8573:-1:exon

A0U90_RS14680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14680
old locus tag: A0U90_14670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010517000.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MSRRAPERLPTESLAGLTERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQMSGRWFNDHTHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVFDLIEQEPNRLREVTGIGPKRAERIVGGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQDAVRLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMDEGHCGLPAGELLTSTAELLEVAAPLIETALALELEAGDVVADSVGETGCIFLAGLYRAEQSIAERLRACAVGRPPWPEIDAEKAMTWVETKTGLALAPSQQEAVRLALRSKVLVITGGPGVGKTTLVNAILKIVTAKGTDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDSATGSFKRDDTNPLACDLLVVDEASMVDVLLMRSLLRALPDNAALLIVGDVDQLPSVGPGQVLADIIGSGAVPVVRLTEVFRQAAQSRIITNAHRINEGRMPELSAEEGSDFYFVEAPDPEIGLRKLLAVVKDRIPSRFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPPGEVKVERFGWTYGPGDKVMQIANDYDRDVFNGDLGVIDRIDIEEGELTVSFDGREVVYGFGELDELVLAYATTIHKSQGSEYPAVVIPLVTQHYAMLARNLLYTGVTRGRKLVVLVGQKKALGIAVRNQGGRRRWSKLREWLVGSTA
SIO_010081: A0U90_RS14680
subclass of: SO_0000673
so part of: A0U90_RS14680
location: complement(6387..8573)
location: region:6387-8573:-1
so has part: feature:6387-8573:-1:exon

WP_070406261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6387-8573:-1:exon

A0U90_RS14685
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14685
old locus tag: A0U90_14675
pseudo: true
so part of: sequence
location: 8783..>9248
location: region:8783-9248:1
so has part: feature:8783-9248:1:exon
subclass of: SO_0000010

position:8783:1
position: 8783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9248:1
position: 9248
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8783-9248:1:exon

A0U90_RS14685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14685
old locus tag: A0U90_14675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009762344.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: A0U90_RS14685
subclass of: SO_0000673
so part of: A0U90_RS14685
location: 8783..>9248
location: region:8783-9248:1
so has part: feature:8783-9248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8783-9248:1:exon

A0U90_RS15740
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS15740
pseudo: true
so part of: sequence
location: <9464..>9661
location: region:9464-9661:1
so has part: feature:9464-9661:1:exon
subclass of: SO_0000010

position:9464:1
position: 9464
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:9661:1
position: 9661
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9464-9661:1:exon

A0U90_RS15740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS15740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553751.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: A0U90_RS15740
subclass of: SO_0000673
so part of: A0U90_RS15740
location: <9464..>9661
location: region:9464-9661:1
so has part: feature:9464-9661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9464-9661:1:exon

A0U90_RS14690
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS14690
old locus tag: A0U90_14680
so part of: sequence
location: 10002..10928
location: region:10002-10928:1
so has part: feature:10002-10928:1:exon
subclass of: SO_0000010

position:10002:1
position: 10002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10928:1
position: 10928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10002-10928:1:exon

A0U90_RS14690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS14690
old locus tag: A0U90_14680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006115744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MGEVHQLLMKHGLTEVRRSFFGEEKHGRLCVEAAHAVLSDERFQIGIAHAGFAMAALPHRRIVDPVWERDGGPIKLLVESGLDSSRNPIGVPYGAIARMILLYLQTQAVKTQSRDVELGNSMNAWLTAMNISVGGKTYQMVREQARRISRCRLTFFNRTADHEFVSNGAFVRDAIFPLEEATVGQGRLWQEVVRLDESFYQSLIDHPLPLRDVAVAQISNRSMAIDIYIWLAYRLHVLERPIDVSWAALRNQFGPGYKELRFFRRDMLPSLKLALSVYPEAQVIIDETRGLTLHPSAPPVAERRLSTC
SIO_010081: A0U90_RS14690
subclass of: SO_0000673
so part of: A0U90_RS14690
location: 10002..10928
location: region:10002-10928:1
so has part: feature:10002-10928:1:exon

WP_070406262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10002-10928:1:exon

A0U90_RS15095
type: Gene
subclass of: SO_0000704
RO_0002162: 153496
locus tag: A0U90_RS15095
so part of: sequence
location: 11481..>11848
location: region:11481-11848:1
so has part: feature:11481-11848:1:exon
subclass of: SO_0000010

position:11481:1
position: 11481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11481-11848:1:exon

A0U90_RS15095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 153496
locus tag: A0U90_RS15095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTSLFRASREQLGLTQSQLKDALNLRLSRSYDRHTISRWENGRQPVPADVMEELVGICQRDKKQTKIITFANQKGGVGKTTSALNISVALSRMGYKVLLVDADPQASATSAILGPRHLEVYR
SIO_010081: A0U90_RS15095
subclass of: SO_0000673
so part of: A0U90_RS15095
location: 11481..>11848
location: region:11481-11848:1
so has part: feature:11481-11848:1:exon

WP_151199962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11481-11848:1:exon