Burkholderia ambifaria strain FDAARGOS_1027 plasmid unnamed.
type: Entry
definition: Burkholderia ambifaria strain FDAARGOS_1027 plasmid unnamed.
sequence version: NZ_CP066039.1
sequence date: 2022-12-19
sequence: sequence
division: CON
label: NZ_CP066039.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN16357196
keyword: RefSeq
source: Burkholderia ambifaria
organism: Burkholderia ambifaria
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP066039.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. 8.0.0, HGAP v. 4\nGenome Coverage :: 1102.72x\nSequencing Technology :: Pacbio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/19/2022 15:43:22\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,764\nCDSs (total) :: 6,673\nGenes (coding) :: 6,598\nCDSs (with protein) :: 6,598\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 75\nCDSs (without protein) :: 75\nPseudo Genes (ambiguous residues) :: 0 of 75\nPseudo Genes (frameshifted) :: 29 of 75\nPseudo Genes (incomplete) :: 67 of 75\nPseudo Genes (internal stop) :: 8 of 75\nPseudo Genes (multiple problems) :: 26 of 75\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 38605
topology: linear
so has quality: SO_0000987
location: 1..38605
location: region:1-38605:1
RO_0002162: 152480

NZ_CP066039
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN16357196
type: BioSample
SIO_000068: biosample

1
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
author: Kerrigan, L.
author: Long, C.
author: Tallon, L.
author: Sadzewicz, L.
author: Zhao, X.
author: Boylan, J.
author: Ott, S.
author: Bowen, H.
author: Vavikolanu, K.
author: Mehta, A.
author: Aluvathingal, J.
author: Nadendla, S.
author: Yan, Y.
author: Sichtig, H.
journal: Unpublished

2
title: Direct Submission
author: Kerrigan, L.
author: Long, C.
author: Tallon, L.
author: Sadzewicz, L.
author: Zhao, X.
author: Boylan, J.
author: Ott, S.
author: Bowen, H.
author: Vavikolanu, K.
author: Mehta, A.
author: Aluvathingal, J.
author: Nadendla, S.
author: Yan, Y.
author: Sichtig, H.
journal: Submitted (08-DEC-2020) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993-0002, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:38605:1
position: 38605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38605:1:source
so part of: sequence
organism: Burkholderia ambifaria
mol type: genomic DNA
strain: FDAARGOS_1027
culture collection: ATCC:BAA-244D-5
plasmid: unnamed
country: USA:VA
collected by: ATCC

152480
type: Taxonomy
SIO_000068: taxonomy

I6H84_RS28315
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28315
old locus tag: I6H84_28320
so part of: sequence
location: <1..1974
location: region:1-1974:1
so has part: feature:1-1974:1:exon
subclass of: SO_0000010

69548485
type: Gene
SIO_000068: ncbigene

position:1974:1
position: 1974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1974:1:exon

I6H84_RS28315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28315
old locus tag: I6H84_28320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: EERICVGLGYGEHQRISAVHNDTDNLHIHIAINKIHPTRHTMHEPYYPHRALAELCTALERDYGLERDNHEPRKRGAEGRAADMERHAGVESLVGWVKRECLDEIKGAQSWQELHQVMRDNGMELRVRANGLVFEAGDGTMVKASTVARDLSKPSLEARLGPFEASPERQAQTTAKRQYRKDPIRLRVNTVELYAKYKAEQQNLTTARAQALERARHRKDRLIEAAKRSNRLRRATIKVVGEGRANKKLLYAQASKALRSEIQAINKQFQQERTALYAEHRRRTWADWLKKEAQHGGADALAALRAREAAQGLKGNTIRGEGQAKPGHAPAVDNITKKGTIIFRAGMSAVRDDGDRLQVSREATREGLQEALRLAMQRYGNRITVNGTVEFKAQMIRAAVDSQLPITFTDPALESRRQALLNKENTHERTERPEHRGRTGRGAGGPGQRPAADQHATGAAAVARAGDGRPAAGRGDRADAGLHAATVHRKPDVGRLGRKPPPQSQHRLRALSELGVVRIAGGSEVLLPRDVPRHVEQQGTQPDHALRRGISRPGTGVGQTPPGVAAADKYIAEREAKRLKGFDIPKHSRYTAGDGALTFQGTRTIEGQALALLKRGDEVMVMPIDQATARRLTRIAVGDAVSITAKGSIKTSKGRSR
SIO_010081: I6H84_RS28315
subclass of: SO_0000673
so part of: I6H84_RS28315
location: <1..1974
location: region:1-1974:1
so has part: feature:1-1974:1:exon

WP_198488776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1974:1:exon

I6H84_RS28320
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28320
old locus tag: I6H84_28325
so part of: sequence
location: 1971..3884
location: region:1971-3884:1
so has part: feature:1971-3884:1:exon
subclass of: SO_0000010

69548486
type: Gene
SIO_000068: ncbigene

position:1971:1
position: 1971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3884:1
position: 3884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1971-3884:1:exon

I6H84_RS28320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28320
old locus tag: I6H84_28325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655356.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKIKMNNAVGPQVRTAKPKPSKLLPVLGAASMVGGLQAATQFFAHTFAYHATLGPNVGHVYAPWSILHWTYKWYSQYPDEIMKAGSMGMLVSTVGLLGVAVAKVVTSNSSKASEYLHGSARWAEKKDIQAAGLLPRERNVLEIVTGKAAPTATGVYVGGWQDKDGNFFYLRHSGPEHVLTYAPTRSGKGVGLVVPTLLSWGASSVITDLKGELWALTAGWRQKHAKNKVLRFEPASTSGGVCWNPLDEIRLGTEYEVGDVQNLATLIVDPDGKGLDSHWQKTAFALLVGVILHALYKAKDDGGTATLPSVDAMLADPNRDIGELWMEMATYGHVDGQNHHAIGSAARDMMDRPEEEAGSVLSTAKSYLALYRDPVVARNVSRSDFRIKQLMHEDDPVSLYIVTQPNDKARLRPLVRVMVNMIVRLLADKMDFEGGRPVAHYKHRLLMMLDEFPSLGKLEIMQESLAFVAGYGIKCYLICQDINQLKSRETGYGHDESITSNCHVQNAYPPNRVETAEHLSRLTGQTTVVKEQITTSGRRTAAMLGQVSRTYQEVQRPLLTPDECLRMPGPKKNAQGEIEEAGDMVIYVAGYPAIYGKQPLYFKDPVFSARAAIPAPKVSDRLRAVAQAETEGEGITI
SIO_010081: I6H84_RS28320
subclass of: SO_0000673
so part of: I6H84_RS28320
location: 1971..3884
location: region:1971-3884:1
so has part: feature:1971-3884:1:exon

WP_011655356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1971-3884:1:exon

I6H84_RS28325
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: traF
locus tag: I6H84_RS28325
old locus tag: I6H84_28330
so part of: sequence
location: 3881..4417
location: region:3881-4417:1
so has part: feature:3881-4417:1:exon
subclass of: SO_0000010

69548487
type: Gene
SIO_000068: ncbigene

position:3881:1
position: 3881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417:1
position: 4417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3881-4417:1:exon

I6H84_RS28325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: traF
locus tag: I6H84_RS28325
old locus tag: I6H84_28330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000086826.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MSRILKRIAAGVVIAGVAALLLAAGGYAAGARVNTTKSIPVGLYWTSSAPVEKGAYVLFCPPQLGVFDDAKERGYIGAGFCQGGYGYMMKRVLAAKDDAVAVADDGVRVNGELLPLSAPIKADKAGRPLPRYQSNSYTLGNSEVLLMSDVSATSFDGRYFGPINRSQIKTVIRPVITW
SIO_010081: I6H84_RS28325
subclass of: SO_0000673
so part of: I6H84_RS28325
location: 3881..4417
location: region:3881-4417:1
so has part: feature:3881-4417:1:exon

WP_006122512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3881-4417:1:exon

I6H84_RS28330
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28330
old locus tag: I6H84_28335
so part of: sequence
location: 4429..6492
location: region:4429-6492:1
so has part: feature:4429-6492:1:exon
subclass of: SO_0000010

69548488
type: Gene
SIO_000068: ncbigene

position:4429:1
position: 4429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6492:1
position: 6492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4429-6492:1:exon

I6H84_RS28330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28330
old locus tag: I6H84_28335
EC number: 5.6.2.1
function: involved in conjugative DNA transfer
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase III
translation: MRLFIAEKPSVAKAIAGELGATGKGDGFIECGTDKVTWCFGHMLEQADPDEYTPDDVPRGQSGKKVWRVDELPIIPESWILKPKDDAKKQLAVIGKLLKEAKEIVNAGDPDREGQLLVDEVLEHFRNSKPVRRFWVSAQDSVSVKRGLAALKENTTYAGWADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVARDREIEAFKAVPYHTIRAVVQHAGGSFAAAWKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTIAAYKQEAKKQNQPLAFALSDITALASAKFGYSAEDVLNTCQALYETHKLTSYPRTDCAYLPESQHADAPRVLEAIKHVNPELAGLVDGADPRIKSKTWDDSKITAHHGIVPTMQKGSKAALSERERNIYDLIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRDVYSQADEEGEKDEDDDSGTQALPSMAQGDAVTCTDATRKDAKTKPPARFTEGTLIRAMENIHKFVSDAEHKKMLREGDGIGTSATRASIISELKRREFLAVKGKQIISTTLGRSVIDALPEVVKSPVLTALYERMLKGVEQGTAALDAFITKQETFIRDQVAKANSGAVTIAGGKEAAPVSSLHKCMACGSGLSRRPSKKKGQFWWGCSNFPTCKQTYPDLKGRPDYSKGRNGPASE
SIO_010081: I6H84_RS28330
subclass of: SO_0000673
so part of: I6H84_RS28330
location: 4429..6492
location: region:4429-6492:1
so has part: feature:4429-6492:1:exon

WP_011114056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4429-6492:1:exon

I6H84_RS28335
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28335
old locus tag: I6H84_28340
so part of: sequence
location: 6514..6903
location: region:6514-6903:1
so has part: feature:6514-6903:1:exon
subclass of: SO_0000010

69548489
type: Gene
SIO_000068: ncbigene

position:6514:1
position: 6514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6903:1
position: 6903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6514-6903:1:exon

I6H84_RS28335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28335
old locus tag: I6H84_28340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein TraD
translation: MNEQTTTNTAAHDEPLAVLPPVDDDAAGREAVREKMADALTPGFQVEFDPDEAERVGAFVEDALSEQDAAASGDDLVEVDGALEPAFLDDEGPSADIPPFITTTNARELYDLRPGETVAQAAARKASEG
SIO_010081: I6H84_RS28335
subclass of: SO_0000673
so part of: I6H84_RS28335
location: 6514..6903
location: region:6514-6903:1
so has part: feature:6514-6903:1:exon

WP_006122510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6514-6903:1:exon

I6H84_RS28340
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28340
old locus tag: I6H84_28345
so part of: sequence
location: 6907..11253
location: region:6907-11253:1
so has part: feature:6907-11253:1:exon
subclass of: SO_0000010

69548490
type: Gene
SIO_000068: ncbigene

position:6907:1
position: 6907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11253:1
position: 11253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6907-11253:1:exon

I6H84_RS28340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28340
old locus tag: I6H84_28345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MPITKAEAQGVTRAFVRDYPGALELAYKFREDAAELYGPRAAEVPADMKGGYVPKETLHAGRAYRGRVDVPLQNVESASDLLMTLRHEVLGHYGANTFAPGEKRALLDGLAAARNEPTLKPLWDDVNRRYAGQSLDVRAEEVFALHCEGIEPSQHQVADQVQQRGQQSFTETCIARVRPMQADDLHNIVCMVAQGLRDRSRTQQNFPQFNELFRRDENMEPKKPFHEVVAEKLIEQLKAGTAPWQKPWEPGEPNAYLPMNPTTGKRYKGINAIHLMAQGRSDARWMTYKQAAAVGAQVRKGEKGTPVQYWKFSEEQDKLDDSGRPVLDAKGQPVKETVMLERPRVFFATVFNGEQIDGLPQLQPKKEQTWNAVERAEHILKASGATITHAAGDRAFYRPSTDSITLPERGQFPSSDRYYATALHELGHWTGHASRLDRDLAHPFGSEGYAKEELRAEIASMIVGDELGIGHDPGQHAAYVGSWIKALQDEPLEVFRAAADAEKIHDYVLAFEQKQVQEQDQQQSQAQDEAVAQALAVDIAEVLDNPDVSFSHYQAFQGDTLEDALRSRGLETVGSITGTDPEQFYAVAHDRLSPVFGIDPSHTDTDNAYLERKGLAQEFANMAEQLHLAQQLQQHGEQIVSSIDAEARWSDGQRIFAFHDQDGEPHQVRSLDELNNYAPDQLMALPALTQQQAAVADQEANMTPPTNDQAAALLAAHPADAVQGIEQAAAARRQLAAGEIDGQAFADATRQHLGVELPPDWSGELRIVGVAEQDGQTVDAAQAGIEPQAFQVYARKADAQFGEDAFAFVAGTRTEGQAEALAERLHLVDALGTDNQHERAAKLARVQEERVRRDPNATEEDISAAKEARKTAEASAMLNDSDAQRRAAELERQERERQQAQPQAEKPERQYINVPYKEKDEAKSLGARWDRQQQSWYVPPGTDAAPFAKWAQGAATAAVEPRSAQPAPEAQGEAQKPAQQAQQARQYLAVPYEQRNAAKAAGALWDKAAKSWYVGPRADAAKLERWKPENVQAQQGPAMTPREEFAEAMRSAGLFTGSNAQGDHPIMDGKRHRVPVEGGKKGALDGFYVGHLDGHPAGRIINNKTGTDITWKSKGYALSDQEKAKLQAEAAEKLAQRAVEQDKAQEATAQRVGRQMADLVPIEQPTPYLQAKGIQAQAGVMTDREGQKTYIPAFDAEGKQWTMQYIQEDGTKRFAKDSKKEGCFHPVGGMDALAAAPALVISEGYATAAQVAEAVGHATVAAFDSGNLEAVAKALHAKFPDKPVIIAGDDDRHLVMTHGNNPGREKAEAAAQAVGGKAIFPIFAPAENTYPRDLPAITPDSFKTHLRAEQRLADAAAGKVELAGDEAAKLKASMLSGAQIAALSTMKQHTDFNDLAHKSELGIEGVKRQIGAAISQVQRDEQQHQEQKHVEKKQQQIEQRPRRAARIG
SIO_010081: I6H84_RS28340
subclass of: SO_0000673
so part of: I6H84_RS28340
location: 6907..11253
location: region:6907-11253:1
so has part: feature:6907-11253:1:exon

WP_011655357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6907-11253:1:exon

I6H84_RS28345
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28345
old locus tag: I6H84_28350
pseudo: true
so part of: sequence
location: 11544..>13388
location: region:11544-13388:1
so has part: feature:11544-13388:1:exon
subclass of: SO_0000010

69548491
type: Gene
SIO_000068: ncbigene

position:11544:1
position: 11544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13388:1
position: 13388
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11544-13388:1:exon

I6H84_RS28345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28345
old locus tag: I6H84_28350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558120.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3-like element IS1071 family transposase
SIO_010081: I6H84_RS28345
subclass of: SO_0000673
so part of: I6H84_RS28345
location: 11544..>13388
location: region:11544-13388:1
so has part: feature:11544-13388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11544-13388:1:exon

I6H84_RS28350
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28350
old locus tag: I6H84_28355
so part of: sequence
location: complement(13542..13922)
location: region:13542-13922:-1
so has part: feature:13542-13922:-1:exon
subclass of: SO_0000010

69548492
type: Gene
SIO_000068: ncbigene

position:13542:-1
position: 13542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13922:-1
position: 13922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13542-13922:-1:exon

I6H84_RS28350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28350
old locus tag: I6H84_28355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPLSIGAFAAVQYLPHIETFLATGDGDFDGPIWAKATSEIKFVDGRASFTMVHEFMSRDGSRISTVDTATGIQVPGIDEVSLTVMHKVVDSTGKFEGLRGTFPSFGLHNFATGKGVQRFGGELS
SIO_010081: I6H84_RS28350
subclass of: SO_0000673
so part of: I6H84_RS28350
location: complement(13542..13922)
location: region:13542-13922:-1
so has part: feature:13542-13922:-1:exon

WP_011655359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13542-13922:-1:exon

I6H84_RS28355
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28355
old locus tag: I6H84_28360
so part of: sequence
location: complement(14008..14505)
location: region:14008-14505:-1
so has part: feature:14008-14505:-1:exon
subclass of: SO_0000010

69548493
type: Gene
SIO_000068: ncbigene

position:14008:-1
position: 14008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14505:-1
position: 14505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14008-14505:-1:exon

I6H84_RS28355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28355
old locus tag: I6H84_28360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MRYPGGKGGAGVYQTIINNIPPHDTYIETHLGGGNILERKRPAARSVGIDVDPEVIEVWQQLDVPGLELHHGDAVAWLESHQFTGSEFVYADPPYVMDSRRGGKLYRHEYDDKGAVSVKVRGEAPIVYLTGQTFYQPKSAPDTQVVNASKTDAAKVISFRLSNSK
SIO_010081: I6H84_RS28355
subclass of: SO_0000673
so part of: I6H84_RS28355
location: complement(14008..14505)
location: region:14008-14505:-1
so has part: feature:14008-14505:-1:exon

WP_011655360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14008-14505:-1:exon

I6H84_RS28360
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28360
old locus tag: I6H84_28365
so part of: sequence
location: complement(14660..15091)
location: region:14660-15091:-1
so has part: feature:14660-15091:-1:exon
subclass of: SO_0000010

69548494
type: Gene
SIO_000068: ncbigene

position:14660:-1
position: 14660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15091:-1
position: 15091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14660-15091:-1:exon

I6H84_RS28360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28360
old locus tag: I6H84_28365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001665065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRKPVLLALSLAFLVSAQSALAAGDAGNFGTPIKSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVVYIPTY
SIO_010081: I6H84_RS28360
subclass of: SO_0000673
so part of: I6H84_RS28360
location: complement(14660..15091)
location: region:14660-15091:-1
so has part: feature:14660-15091:-1:exon

WP_001665065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14660-15091:-1:exon

I6H84_RS28365
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28365
old locus tag: I6H84_28370
so part of: sequence
location: complement(15107..15805)
location: region:15107-15805:-1
so has part: feature:15107-15805:-1:exon
subclass of: SO_0000010

69548495
type: Gene
SIO_000068: ncbigene

position:15107:-1
position: 15107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15805:-1
position: 15805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15107-15805:-1:exon

I6H84_RS28365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28365
old locus tag: I6H84_28370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraX family protein
translation: MKALRIPDGTVEALKWLALVLMTGDHVNKYLFNATLPVLFEAGRVALPLFVFVLAYNLARPGTLERGVYGRTMSRLAMFGALASVPFVALGGLYAGWWPLNVMFTLLVVTATAYLVERGGKLHLAAAGVVFLVGGSSVEYWWPAVAFGLAVWSYTRRPSWAAAAVAVLACAALWFVNRNLWALAALPVLFLASRVDVRVPRLRWAFYAYYPLHLASLWLIRIPMSKAGYLFF
SIO_010081: I6H84_RS28365
subclass of: SO_0000673
so part of: I6H84_RS28365
location: complement(15107..15805)
location: region:15107-15805:-1
so has part: feature:15107-15805:-1:exon

WP_011114053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15107-15805:-1:exon

I6H84_RS28370
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28370
old locus tag: I6H84_28375
so part of: sequence
location: complement(15805..16071)
location: region:15805-16071:-1
so has part: feature:15805-16071:-1:exon
subclass of: SO_0000010

69548496
type: Gene
SIO_000068: ncbigene

position:16071:-1
position: 16071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15805-16071:-1:exon

I6H84_RS28370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28370
old locus tag: I6H84_28375
function: unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKFHAFMMRYTLGVGRLLQAYCKWAEGQAKNQLDLLLLGLGPIFALGLLLWALPAWIGKPIAFVLSLPALYIIFLVLRAYAIRGGRR
SIO_010081: I6H84_RS28370
subclass of: SO_0000673
so part of: I6H84_RS28370
location: complement(15805..16071)
location: region:15805-16071:-1
so has part: feature:15805-16071:-1:exon

WP_010890140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15805-16071:-1:exon

I6H84_RS28375
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28375
old locus tag: I6H84_28380
so part of: sequence
location: complement(16100..16735)
location: region:16100-16735:-1
so has part: feature:16100-16735:-1:exon
subclass of: SO_0000010

69548497
type: Gene
SIO_000068: ncbigene

position:16100:-1
position: 16100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16735:-1
position: 16735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16100-16735:-1:exon

I6H84_RS28375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28375
old locus tag: I6H84_28380
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MPFFADLPPQLQERVVCSISAAVKYEVPVNIVLAVAEKEGGKPGQWVRNSNGTHDVGPMQFNTAYLGDLARYGITANDVAAAGCYSFDLAAWRLRMHIRNDKGDLWTKAANYHSRTPQYNAVYRADLMRKASKWADWLEARFVTLDVTKAGATPSTPSQPATVAQRATPAARPAPAPQQAAPAAAAARSVSVAGYVPRTVSFNTSREGSAE
SIO_010081: I6H84_RS28375
subclass of: SO_0000673
so part of: I6H84_RS28375
location: complement(16100..16735)
location: region:16100-16735:-1
so has part: feature:16100-16735:-1:exon

WP_011114052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16100-16735:-1:exon

I6H84_RS28380
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28380
old locus tag: I6H84_28385
so part of: sequence
location: complement(16749..17336)
location: region:16749-17336:-1
so has part: feature:16749-17336:-1:exon
subclass of: SO_0000010

69548498
type: Gene
SIO_000068: ncbigene

position:16749:-1
position: 16749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17336:-1
position: 17336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16749-17336:-1:exon

I6H84_RS28380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28380
old locus tag: I6H84_28385
function: probable role in the formation of the mating lock (cell-cell contact between donor and recipient) during conjugation on the basis that TrbM shows homology to Haemophilus influenzae adhesin and has an export signal sequence
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKKLFALAALVAALGSTAGTASAQDVLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRKLSDTIRARLNFLQLCPVASQTPEMQSLVSAISRGAGRCDAQSLNSTLVMWTGGYDDGRTYISNQLPDYCGAYTGHAYTDFASSGTLPRYVGTPERGGYWVEARDYDRALAEYNERIRREDEERRRQSWLN
SIO_010081: I6H84_RS28380
subclass of: SO_0000673
so part of: I6H84_RS28380
location: complement(16749..17336)
location: region:16749-17336:-1
so has part: feature:16749-17336:-1:exon

WP_010890138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16749-17336:-1:exon

I6H84_RS28385
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbL
locus tag: I6H84_RS28385
old locus tag: I6H84_28390
so part of: sequence
location: complement(17354..19072)
location: region:17354-19072:-1
so has part: feature:17354-19072:-1:exon
subclass of: SO_0000010

69548499
type: Gene
SIO_000068: ncbigene

position:17354:-1
position: 17354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19072:-1
position: 19072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17354-19072:-1:exon

I6H84_RS28385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbL
locus tag: I6H84_RS28385
old locus tag: I6H84_28390
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114051.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRMPANLKTLALPLFVWLAFFAVDAHAAIDNAGVFDSVLDRYQAAASGWAGVITTAATWLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWALTNGPNFASSIYASLRQLAGNATGLGNALSPSGIVDVGFAIFDKVMDQSSVWSPVDSMAGILMAVAILVILALVGVNMLLLLASGWVLAYGGVFFLGFGGSRWTSDMAINYYKVVLGVAAQLFAMVLLVGIGKTFLDDYYSRMSAGISLKEMGVMLIVVIILLALVNKIPPLIAGIITGASVGGAGIGQFGAGAALGAAGMAAAAAATGGAALAAGAASAAGGASAVMAAFSKANENVSAGTDVMSAFSGGGSSGGGAGGGGDAGTGSTPFAQAAGFSGSSGGGSSSGGGSPSTGSSSGSSKGGDKGGGKADAGGQGSSSTASTGSSADKAAKNEPKPAGGAGQGQQAAPGSTGPGLLASAASALGTAGRIAADAGANLAKGTADVAKAKAASLREAAAERIADTTGGKIAAAIKAQGSGTAENIDVPDQQPAPSFGDNSLAGGPADADPESEVAAFANREQGRDGTTA
SIO_010081: I6H84_RS28385
subclass of: SO_0000673
so part of: I6H84_RS28385
location: complement(17354..19072)
location: region:17354-19072:-1
so has part: feature:17354-19072:-1:exon

WP_011114051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17354-19072:-1:exon

I6H84_RS28390
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbK
locus tag: I6H84_RS28390
old locus tag: I6H84_28395
so part of: sequence
location: complement(19083..19310)
location: region:19083-19310:-1
so has part: feature:19083-19310:-1:exon
subclass of: SO_0000010

69548500
type: Gene
SIO_000068: ncbigene

position:19083:-1
position: 19083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19310:-1
position: 19310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19083-19310:-1:exon

I6H84_RS28390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbK
locus tag: I6H84_RS28390
old locus tag: I6H84_28395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000644148.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion lipoprotein TrbK
translation: MKAIKALSLASAALVAALVAGCDNKPATAPMPEVNDENCKPENIAKIEDKGVQQAFSSLCLRRGGDFKPSPKREW
SIO_010081: I6H84_RS28390
subclass of: SO_0000673
so part of: I6H84_RS28390
location: complement(19083..19310)
location: region:19083-19310:-1
so has part: feature:19083-19310:-1:exon

WP_000644148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19083-19310:-1:exon

I6H84_RS28395
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbJ
locus tag: I6H84_RS28395
old locus tag: I6H84_28400
so part of: sequence
location: complement(19320..20084)
location: region:19320-20084:-1
so has part: feature:19320-20084:-1:exon
subclass of: SO_0000010

69548501
type: Gene
SIO_000068: ncbigene

position:19320:-1
position: 19320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20084:-1
position: 20084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19320-20084:-1:exon

I6H84_RS28395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbJ
locus tag: I6H84_RS28395
old locus tag: I6H84_28400
function: mating pair formation and entry exclusion
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000802794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKPKFLAAKLALVIAVSSTLAVTPVQAGIPVIDGTNLSQNIMTAIESVAQTLKQIEQYSTQLQQYQNQLQNTMAPAAYIWDQAQSTINGLMNAVNTLDYYKTQLGSLDSYIGKFQDVNYYKNSPCFTAAGCSDAERAALRNVAQLASESQKKANDALFKGLDRQQTNLTADAATLQRLQSAAQGAQGQMQAIGYANQLASQQANQLLQIRGLLIAQQNAMATKMQADADKEAQQAAAAAQLRQGSYRASPARTW
SIO_010081: I6H84_RS28395
subclass of: SO_0000673
so part of: I6H84_RS28395
location: complement(19320..20084)
location: region:19320-20084:-1
so has part: feature:19320-20084:-1:exon

WP_010890135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19320-20084:-1:exon

I6H84_RS28400
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28400
old locus tag: I6H84_28405
so part of: sequence
location: complement(20105..21526)
location: region:20105-21526:-1
so has part: feature:20105-21526:-1:exon
subclass of: SO_0000010

69548502
type: Gene
SIO_000068: ncbigene

position:20105:-1
position: 20105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21526:-1
position: 21526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20105-21526:-1:exon

I6H84_RS28400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28400
old locus tag: I6H84_28405
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTENADQMAPDASPGEVSKKAGVRRVNNMPMYILGGVLLSFVLVMALVAADRAAKQNAPADGPKEKAGNTSMFAKEIAGDKTGGLIEPASPLKVPDMPTGPASAPLEIARPSNPDAPPAPPANPGNPGQPVNDDEAQRIRMAKMQMFGEAVKAKTTVRVDAPRSNGSAPGGPSTYTGTPQTRDEMLNRIAAVQQQIDAQRSNDPTAAYQARLAQIRGMGVGGGGAAPAAGGMGAGGAPQLLQTSTSGGGRNSMAQFGQGGQGDRWKLDSQPEAPRTPFELRAGFVVPATLISGINSDLPGQIMAQVAQDVYDTPTGKHLLIPQGSRLVGSYSSDVAYGQARVLVAWQRIVFPDGKAMDIGAMPGADSAGYAGFHDQVNNHYVRLFGSAFLMSGVTAGITYSQRQNQATNTYGAPSASSALSEALGQQLGQVTAQLIAKNLSISPTLEIRPGYRFNVVVTKDMTFSKPYRSFDY
SIO_010081: I6H84_RS28400
subclass of: SO_0000673
so part of: I6H84_RS28400
location: complement(20105..21526)
location: region:20105-21526:-1
so has part: feature:20105-21526:-1:exon

WP_011114050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20105-21526:-1:exon

I6H84_RS28405
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28405
old locus tag: I6H84_28410
so part of: sequence
location: complement(21531..22019)
location: region:21531-22019:-1
so has part: feature:21531-22019:-1:exon
subclass of: SO_0000010

69548503
type: Gene
SIO_000068: ncbigene

position:21531:-1
position: 21531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22019:-1
position: 22019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21531-22019:-1:exon

I6H84_RS28405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28405
old locus tag: I6H84_28410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRKIVSLALLALALGLGGCATTSQYGNFVQSAALDQQKLATDAVQQLATLYAPARTRLELQQPTPDPFGQALVKSLRDKGYALLEYAPAGASTQAPASAASQASAPATTAASGGLPLRYVLDQAGDSNLYRLTLMVGNQSITRPYLAQNGTFAPAGYWVRKE
SIO_010081: I6H84_RS28405
subclass of: SO_0000673
so part of: I6H84_RS28405
location: complement(21531..22019)
location: region:21531-22019:-1
so has part: feature:21531-22019:-1:exon

WP_006122479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21531-22019:-1:exon

I6H84_RS28410
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbG
locus tag: I6H84_RS28410
old locus tag: I6H84_28415
so part of: sequence
location: complement(22022..22921)
location: region:22022-22921:-1
so has part: feature:22022-22921:-1:exon
subclass of: SO_0000010

69548504
type: Gene
SIO_000068: ncbigene

position:22022:-1
position: 22022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22921:-1
position: 22921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22022-22921:-1:exon

I6H84_RS28410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbG
locus tag: I6H84_RS28410
old locus tag: I6H84_28415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000753228.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKKTLSALIVGAAVAVPSLALAAPGDDIADKYFNKTNPTLTAQERAALAIAKRWEAGSATGIKPVAGSGGAIKFVYGAQQPSIVCAVLQVCDVALQPGEQVNSINLGDTARWTVEPAITGSGATEVQHLIIKPMDVGLETSLVVTTNRRSYHFRLRSHRTEYMPQVSFTYPEEAQAKWDAIQRREKQERTDNTLPATGEYLGDLSFDYELSGSASWKPVRVYNDGRKTIIEMPGTMQQTEAPTLLVVRKEGGLFTDDETVLVNYRVQGNRYIVDTVFDRAILIAGVGSSQDRVTISRRK
SIO_010081: I6H84_RS28410
subclass of: SO_0000673
so part of: I6H84_RS28410
location: complement(22022..22921)
location: region:22022-22921:-1
so has part: feature:22022-22921:-1:exon

WP_006122480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22022-22921:-1:exon

I6H84_RS28415
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28415
old locus tag: I6H84_28420
so part of: sequence
location: complement(22939..23721)
location: region:22939-23721:-1
so has part: feature:22939-23721:-1:exon
subclass of: SO_0000010

69548505
type: Gene
SIO_000068: ncbigene

position:22939:-1
position: 22939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23721:-1
position: 23721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22939-23721:-1:exon

I6H84_RS28415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28415
old locus tag: I6H84_28420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MSIADTLKGLIFKKPANSAEPRDPRRSKEPLAGGRRAGEAENPYLAARRTWNDHVGGVVSQRQTWQVIGILSLLIALAGVGGVIHIGSQSKFIPYVVEVDKLGQTVAAGPVQAAGKADPRVIHAAVADWMSCARMVSPDVALQRKCVFKAYSMLAPNDPATPKMNEWLNGTPDSSPFKRAEKEMVSVEIKTVIPQTPDTWQVEWVETTRDRQGTLKGQPVTWRALVTTYIAEVTPNTTDEQLRNNPLSIYVRDYSWSRIQ
SIO_010081: I6H84_RS28415
subclass of: SO_0000673
so part of: I6H84_RS28415
location: complement(22939..23721)
location: region:22939-23721:-1
so has part: feature:22939-23721:-1:exon

WP_006122481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22939-23721:-1:exon

I6H84_RS28420
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28420
old locus tag: I6H84_28425
so part of: sequence
location: complement(23718..26276)
location: region:23718-26276:-1
so has part: feature:23718-26276:-1:exon
subclass of: SO_0000010

69548506
type: Gene
SIO_000068: ncbigene

position:23718:-1
position: 23718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26276:-1
position: 26276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23718-26276:-1:exon

I6H84_RS28420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28420
old locus tag: I6H84_28425
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MIEAIAIAIAVLGAVLLLILFARIRAVDAELKLKKHRAKDAGLADLLNYAAVVDDGVIVGKNGSFMAAWLYKGDDNASSTEEQREMVSFRINQALAGLGNGWMVHVDAVRRPAPNYSERGVSSFPDSVSFAIDEERRRLFEGLGAMFEGYFVLTVTWFPPVLAQRKFVELMFDDDAVAPDHTARTTGLIAQFKREITSLESRLSSAVKMTRLRGQKVVSEEGREVTHDDFLSWLQFCVTGLHHPVMLPSNPMYLDAVIGGQELWGGVVPKIGRKFIQVVAIEGFPLESTPGVLSALAELPSEYRWSSRFIFMDQHESLKHLDKFRKKWKQKIRGFFDQVFNTNTGSINQDAAAMVGDAEAAIAEVNSGLVAAGYYTSVVVLMDEDRERLAASALLVEKAVNRLAFAARIETINTLDAYLGSLPGHGVENVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFMFGPTGAGKSTHLGIIAAQLRRYAGMSIYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGDRAWAMEWIDTILALNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDEAIREAIKQYTVDGSMGHLLDAEEDGLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQPSVIILDEAWLMLGHPAFRAKIREWLKVLRKANCLVLMATQSLSDAANSGILDVIVESTATKIFLPNVYARDEDTSALYRRMGLNARQIEILATAIPKRQYYYVSENGRRLYDLALGPMALAFVGASDKESVATIKSLEAKFGHEWVHEWLAGRGLNLNDYLEAA
SIO_010081: I6H84_RS28420
subclass of: SO_0000673
so part of: I6H84_RS28420
location: complement(23718..26276)
location: region:23718-26276:-1
so has part: feature:23718-26276:-1:exon

WP_011114047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23718-26276:-1:exon

I6H84_RS28425
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28425
old locus tag: I6H84_28430
so part of: sequence
location: complement(26273..26584)
location: region:26273-26584:-1
so has part: feature:26273-26584:-1:exon
subclass of: SO_0000010

69548507
type: Gene
SIO_000068: ncbigene

position:26273:-1
position: 26273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26584:-1
position: 26584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26273-26584:-1:exon

I6H84_RS28425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28425
old locus tag: I6H84_28430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010676131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MALRAIPIRRAGNRENLFMGGDRELVMFSGLLAGALIFSAQEVRATVFGIALWFGALFALRLMAKADPKLRHVYLRHRRYKPYYPARSTPFRDNTPSQGKQYK
SIO_010081: I6H84_RS28425
subclass of: SO_0000673
so part of: I6H84_RS28425
location: complement(26273..26584)
location: region:26273-26584:-1
so has part: feature:26273-26584:-1:exon

WP_001207961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26273-26584:-1:exon

I6H84_RS28430
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbC
locus tag: I6H84_RS28430
old locus tag: I6H84_28435
so part of: sequence
location: complement(26588..27052)
location: region:26588-27052:-1
so has part: feature:26588-27052:-1:exon
subclass of: SO_0000010

69548508
type: Gene
SIO_000068: ncbigene

position:26588:-1
position: 26588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27052:-1
position: 27052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26588-27052:-1:exon

I6H84_RS28430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbC
locus tag: I6H84_RS28430
old locus tag: I6H84_28435
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer system pilin TrbC
translation: MQATFPAFRLNRNALFYMGLFALLAFFLLAPQHAFASEGTGGSLPYESWLTNLRNSVTGPVAFALSIIGIVVAGGILIFGGELNGFFRTLIFIVLVMALLVGAQNMMSTFFGRGAEIAALTDGALHQVKVAALDVAGFPGEAVMRWAERGHIAG
SIO_010081: I6H84_RS28430
subclass of: SO_0000673
so part of: I6H84_RS28430
location: complement(26588..27052)
location: region:26588-27052:-1
so has part: feature:26588-27052:-1:exon

WP_011114046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26588-27052:-1:exon

I6H84_RS28435
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trbB
locus tag: I6H84_RS28435
old locus tag: I6H84_28440
so part of: sequence
location: complement(27069..28031)
location: region:27069-28031:-1
so has part: feature:27069-28031:-1:exon
subclass of: SO_0000010

69548509
type: Gene
SIO_000068: ncbigene

position:27069:-1
position: 27069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28031:-1
position: 28031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27069-28031:-1:exon

I6H84_RS28435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trbB
locus tag: I6H84_RS28435
old locus tag: I6H84_28440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000132020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTDQKPEHNSIKERAKKKLERDMGPELLAALNDPKTVEIMLNADGKLWLERLGEPMKCIGTLRVAQAQAIIETIAGYHGKEVTRSKPILEGELPLDGSRFAGQLPPVVPAPTFAIRKKAVAIFTLDQYVERGIMTAPQREALIAAVRAHRNILVIGGTGSGKTTLVNAIINEMVIQDPTERVFIIEDTGEIQCAAENYVQYHTSIDVNMTALLKTTLRMRPDRILVGEVRGPEALDLLMAWNTGHEGGAATLHANNAKAGLDRLAMLISMHPDSPKPIEPLIGEAVHVVVHIARVEGSRRIQEILEVSGFANGQYITKTL
SIO_010081: I6H84_RS28435
subclass of: SO_0000673
so part of: I6H84_RS28435
location: complement(27069..28031)
location: region:27069-28031:-1
so has part: feature:27069-28031:-1:exon

WP_000132020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27069-28031:-1:exon

I6H84_RS28440
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28440
old locus tag: I6H84_28445
so part of: sequence
location: complement(28341..28703)
location: region:28341-28703:-1
so has part: feature:28341-28703:-1:exon
subclass of: SO_0000010

69548510
type: Gene
SIO_000068: ncbigene

position:28341:-1
position: 28341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28703:-1
position: 28703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28341-28703:-1:exon

I6H84_RS28440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28440
old locus tag: I6H84_28445
function: gene regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000283041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MYNYIFFTNVLRLLDERHMTKKELSDRSGVSISFLSDLTTGKANPSLKVMEDIAQALETPLPLLLESTDLDKEALDALAGGKAPRSLPPGFERVAAVLPEHQAFIVKKWGEATRKKLRGS
SIO_010081: I6H84_RS28440
subclass of: SO_0000673
so part of: I6H84_RS28440
location: complement(28341..28703)
location: region:28341-28703:-1
so has part: feature:28341-28703:-1:exon

WP_010890126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28341-28703:-1:exon

I6H84_RS28445
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28445
old locus tag: I6H84_28450
so part of: sequence
location: 28817..29158
location: region:28817-29158:1
so has part: feature:28817-29158:1:exon
subclass of: SO_0000010

69548511
type: Gene
SIO_000068: ncbigene

position:28817:1
position: 28817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29158:1
position: 29158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28817-29158:1:exon

I6H84_RS28445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28445
old locus tag: I6H84_28450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000019167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSHNLFQFIGNLTRDTDVRHSENSARAVFDLAVNRVWRNAAGAKQEQTDFFRIKSFGGLAENAGKYLGKGSKVFVQGRIEPTKYEKDGKTEYGFDFIAEEIEYLDTKAPGGGQ
SIO_010081: I6H84_RS28445
subclass of: SO_0000673
so part of: I6H84_RS28445
location: 28817..29158
location: region:28817-29158:1
so has part: feature:28817-29158:1:exon

WP_000019167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28817-29158:1:exon

I6H84_RS28450
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: trfA
locus tag: I6H84_RS28450
old locus tag: I6H84_28455
so part of: sequence
location: 29205..30425
location: region:29205-30425:1
so has part: feature:29205-30425:1:exon
subclass of: SO_0000010

69548512
type: Gene
SIO_000068: ncbigene

position:29205:1
position: 29205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30425:1
position: 30425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29205-30425:1:exon

I6H84_RS28450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: trfA
locus tag: I6H84_RS28450
old locus tag: I6H84_28455
function: initiation of replication
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator TrfA
translation: MQNEFNEQEYRRKLIEGGLSEADATDLAARTAAARRDSGSAGGAFRPAGSLFELPATAGDNEAALPPKLPTPASAAVERSERMAQESAELARTMGLPPEPRTAVNKMAEQIGALAQDKRSSAMATKKRTAGGELAEKVSEAKQTALLKHTKQQIKDMQLSLFDLAPWPDHMRALPNDFGRSAIFTVRNKKVPRAALQGQSIYHVNKDVEITYTGIELRADDDELVFAQVLEYAKRTALGEPVSFTFYELCQDLDWSINGRYYTRAEECLTRLQASAMQFSSQRIGRLESVSLIRRFRVLDRGKRTSRCQVEIDAEIVVLFAGDHYTKFVWEKYRKLSPTARRMFDYFATHKEPYPLKLETFRLMCGSDSTRPKKWREQVGEACDELRENGLVESAWVNDDLVHCKR
SIO_010081: I6H84_RS28450
subclass of: SO_0000673
so part of: I6H84_RS28450
location: 29205..30425
location: region:29205-30425:1
so has part: feature:29205-30425:1:exon

WP_011114072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29205-30425:1:exon

I6H84_RS28455
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28455
old locus tag: I6H84_28460
so part of: sequence
location: complement(31748..32062)
location: region:31748-32062:-1
so has part: feature:31748-32062:-1:exon
subclass of: SO_0000010

69548513
type: Gene
SIO_000068: ncbigene

position:31748:-1
position: 31748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32062:-1
position: 32062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31748-32062:-1:exon

I6H84_RS28455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28455
old locus tag: I6H84_28460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSYAVVFSPEAEEQLAELYRYIAAAASPDVAARYTEAIVTYCESLRTFPLRGTMRDDVRPGLRITNYRKRAVIAFDVAGDLVSIIGVFYGGQDYESILHDDADD
SIO_010081: I6H84_RS28455
subclass of: SO_0000673
so part of: I6H84_RS28455
location: complement(31748..32062)
location: region:31748-32062:-1
so has part: feature:31748-32062:-1:exon

WP_011117139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31748-32062:-1:exon

I6H84_RS28460
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28460
old locus tag: I6H84_28465
so part of: sequence
location: complement(32059..32328)
location: region:32059-32328:-1
so has part: feature:32059-32328:-1:exon
subclass of: SO_0000010

69548514
type: Gene
SIO_000068: ncbigene

position:32059:-1
position: 32059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32328:-1
position: 32328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32059-32328:-1:exon

I6H84_RS28460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28460
old locus tag: I6H84_28465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012207631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MRTTQQLSITLPNDMADVVKTKVKTGEYASESEVIRDGLRALLARDRAVESWLHNQVGPAYDALKADPSRAVTADQVRARLAAEHAKAQ
SIO_010081: I6H84_RS28460
subclass of: SO_0000673
so part of: I6H84_RS28460
location: complement(32059..32328)
location: region:32059-32328:-1
so has part: feature:32059-32328:-1:exon

WP_001260984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32059-32328:-1:exon

I6H84_RS28465
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28465
old locus tag: I6H84_28470
so part of: sequence
location: 32497..32925
location: region:32497-32925:1
so has part: feature:32497-32925:1:exon
subclass of: SO_0000010

69548515
type: Gene
SIO_000068: ncbigene

position:32497:1
position: 32497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32925:1
position: 32925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32497-32925:1:exon

I6H84_RS28465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28465
old locus tag: I6H84_28470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein
translation: MNTQDQPVTASLVAEAQRLDFLPTYFGPRLMMRGEALVYAWLRRLCERYNGAYWHYYTLSDGGFYLAPDLAERLEIEVDGNGFRGELSADAAGIVATLFALGQLAAEIAGTDAADALIDRYHFLRGFAAGHPEAAAIYRAID
SIO_010081: I6H84_RS28465
subclass of: SO_0000673
so part of: I6H84_RS28465
location: 32497..32925
location: region:32497-32925:1
so has part: feature:32497-32925:1:exon

WP_001095942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32497-32925:1:exon

I6H84_RS28470
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28470
old locus tag: I6H84_28475
so part of: sequence
location: 32977..34182
location: region:32977-34182:1
so has part: feature:32977-34182:1:exon
subclass of: SO_0000010

69548516
type: Gene
SIO_000068: ncbigene

position:32977:1
position: 32977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34182:1
position: 34182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32977-34182:1:exon

I6H84_RS28470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28470
old locus tag: I6H84_28475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein KlcB
translation: MAKRTKQPAQAGQDWSAPAAELLAELPADRDGLLAAAVAAVVEIDAAVMRGDGAAAELAGDRYEAIIWKLNGGTNFGCMADDEAAGRVIERHCAAVPGDVPLWGQRGQFLAVAGDVRALVEYEAGYGGPLNAHFQFHAVDLDRPFISATGYRSHFDTARGCMTVDEVARGILTAMLAEKKRPVLIEANYRDRLADAPLPDWLAGLVPPARREPATVTIPPGFVLVDVVLPAHKAFIARRWAAEAAGKVKAARAARSNAKGKAGGRERDPASAETAMRCSTAKADDCKAEAGPVSPEATMPGAGEASCSTARNGDAGPADLVEFTPAPGQRCEIVSVHHPVFAKEIGKRVIIVKVHPDTRQVWAHDDRPVTYKTNRAGRRVVDSDPSCIQSIYGFDQLRLIT
SIO_010081: I6H84_RS28470
subclass of: SO_0000673
so part of: I6H84_RS28470
location: 32977..34182
location: region:32977-34182:1
so has part: feature:32977-34182:1:exon

WP_011405605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32977-34182:1:exon

I6H84_RS28475
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: korC
locus tag: I6H84_RS28475
old locus tag: I6H84_28480
so part of: sequence
location: 34199..34456
location: region:34199-34456:1
so has part: feature:34199-34456:1:exon
subclass of: SO_0000010

69548517
type: Gene
SIO_000068: ncbigene

position:34199:1
position: 34199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34456:1
position: 34456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34199-34456:1:exon

I6H84_RS28475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: korC
locus tag: I6H84_RS28475
old locus tag: I6H84_28480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor KorC
translation: MTNDANIRLECLKPAERWAQPSGEEVREVLRLAGLTGGKAAKVLGLGPKGDRTIRRWVGEDTPIPYAAWALLCDYAGLGLIWKEA
SIO_010081: I6H84_RS28475
subclass of: SO_0000673
so part of: I6H84_RS28475
location: 34199..34456
location: region:34199-34456:1
so has part: feature:34199-34456:1:exon

WP_011117141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34199-34456:1:exon

I6H84_RS28480
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
gene: kleA
locus tag: I6H84_RS28480
old locus tag: I6H84_28485
so part of: sequence
location: 34616..34852
location: region:34616-34852:1
so has part: feature:34616-34852:1:exon
subclass of: SO_0000010

69548518
type: Gene
SIO_000068: ncbigene

position:34616:1
position: 34616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34852:1
position: 34852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34616-34852:1:exon

I6H84_RS28480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
gene: kleA
locus tag: I6H84_RS28480
old locus tag: I6H84_28485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015913627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stable inheritance protein KleA
translation: MSKNKIMPWVDALPNVEATDFQARRDQIEATMAEAAELVKQAEELRGKAYFAALSLEASAKGEWSSQAVEQAKRSVGW
SIO_010081: I6H84_RS28480
subclass of: SO_0000673
so part of: I6H84_RS28480
location: 34616..34852
location: region:34616-34852:1
so has part: feature:34616-34852:1:exon

WP_000041932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34616-34852:1:exon

I6H84_RS28485
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28485
old locus tag: I6H84_28490
so part of: sequence
location: 34911..35126
location: region:34911-35126:1
so has part: feature:34911-35126:1:exon
subclass of: SO_0000010

69548519
type: Gene
SIO_000068: ncbigene

position:34911:1
position: 34911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35126:1
position: 35126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34911-35126:1:exon

I6H84_RS28485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28485
old locus tag: I6H84_28490
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2688 domain-containing protein
translation: MSKGKIEIIETCCRRCGKSIRTLSHTIIGADDAREKFGSICGGCITPEEDNELTEMLLAAAVRRMSGATLQ
SIO_010081: I6H84_RS28485
subclass of: SO_0000673
so part of: I6H84_RS28485
location: 34911..35126
location: region:34911-35126:1
so has part: feature:34911-35126:1:exon

WP_010890114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34911-35126:1:exon

I6H84_RS28490
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28490
old locus tag: I6H84_28495
so part of: sequence
location: 35271..35600
location: region:35271-35600:1
so has part: feature:35271-35600:1:exon
subclass of: SO_0000010

69548520
type: Gene
SIO_000068: ncbigene

position:35271:1
position: 35271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35600:1
position: 35600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35271-35600:1:exon

I6H84_RS28490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28490
old locus tag: I6H84_28495
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012478184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KleE stable inheritance protein
translation: MSNIVKFPRASKPPAPEPVQPAAPAAAPAAPKAEGRGLVAGLVKFVWVATVLVWPVLKWVLAIITFFQFVRMLYHWNTPGVYAGWSFLAYFAALTAITYFVSIYKPKGL
SIO_010081: I6H84_RS28490
subclass of: SO_0000673
so part of: I6H84_RS28490
location: 35271..35600
location: region:35271-35600:1
so has part: feature:35271-35600:1:exon

WP_010890113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35271-35600:1:exon

I6H84_RS28495
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28495
old locus tag: I6H84_28500
so part of: sequence
location: 35602..36132
location: region:35602-36132:1
so has part: feature:35602-36132:1:exon
subclass of: SO_0000010

69548521
type: Gene
SIO_000068: ncbigene

position:35602:1
position: 35602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36132:1
position: 36132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35602-36132:1:exon

I6H84_RS28495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28495
old locus tag: I6H84_28500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2761 domain-containing protein
translation: MAKQTLPYPPGFVEPTTGRVAVLVREYADSDLNGDAPAYWYSAQSEEWGLDPWRLVEGVDPHVGGGSFDVCFASGGTRTVGPLMTFFLSAAHAAQLIDAKGEELALQRATLAVIADGLGLPAKALRIEAKVEGRPAVFYDQDGATLCACAVDSDHWRQARATAATASAIDKARTNF
SIO_010081: I6H84_RS28495
subclass of: SO_0000673
so part of: I6H84_RS28495
location: 35602..36132
location: region:35602-36132:1
so has part: feature:35602-36132:1:exon

WP_011117143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35602-36132:1:exon

I6H84_RS28500
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28500
old locus tag: I6H84_28505
so part of: sequence
location: 36246..36548
location: region:36246-36548:1
so has part: feature:36246-36548:1:exon
subclass of: SO_0000010

69548522
type: Gene
SIO_000068: ncbigene

position:36246:1
position: 36246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36548:1
position: 36548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36246-36548:1:exon

I6H84_RS28500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28500
old locus tag: I6H84_28505
function: regulation of gene expression
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator KorA
translation: MKKRLTEAQFQTAIKGLEIGQQTIDIARGVLVDGRPQAEFVTSLGLTKGAVSQAVSRVWAAAGEQLPEGFERVTAVLPEHQAFIVKKWEADAKRKQEPKS
SIO_010081: I6H84_RS28500
subclass of: SO_0000673
so part of: I6H84_RS28500
location: 36246..36548
location: region:36246-36548:1
so has part: feature:36246-36548:1:exon

WP_010890110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36246-36548:1:exon

I6H84_RS28505
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28505
old locus tag: I6H84_28510
so part of: sequence
location: 36545..37309
location: region:36545-37309:1
so has part: feature:36545-37309:1:exon
subclass of: SO_0000010

69548523
type: Gene
SIO_000068: ncbigene

position:36545:1
position: 36545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37309:1
position: 37309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36545-37309:1:exon

I6H84_RS28505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28505
old locus tag: I6H84_28510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTLVTAIQKGGQGKTFATCHLAFDFLERGLRVAVIDLDTQGNASFTLSAYQSGYLASQLFTGDTDDLRYWFGKREGESLALIAADANLANLDKMELSQAAAALRASVAALGEFFDVCLIDTAPSLGVAMTAAVLTADYMLSPIEMEAYSLQGMKKMVAVISNLRKQNPKLRFLGMVPNKVDARKPRHVNNLATLQQAYPQLILPFSIGARDSIAEALGEQMPVWKIKKTAARKATQEVRALADYVFTKMEIAQ
SIO_010081: I6H84_RS28505
subclass of: SO_0000673
so part of: I6H84_RS28505
location: 36545..37309
location: region:36545-37309:1
so has part: feature:36545-37309:1:exon

WP_000855329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36545-37309:1:exon

I6H84_RS28510
type: Gene
subclass of: SO_0000704
RO_0002162: 152480
locus tag: I6H84_RS28510
old locus tag: I6H84_28515
so part of: sequence
location: 37306..38355
location: region:37306-38355:1
so has part: feature:37306-38355:1:exon
subclass of: SO_0000010

69548524
type: Gene
SIO_000068: ncbigene

position:37306:1
position: 37306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38355:1
position: 38355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37306-38355:1:exon

I6H84_RS28510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 152480
locus tag: I6H84_RS28510
old locus tag: I6H84_28515
function: DNA binding protein involved in transcriptional regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890108.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSAKTNAKKKEQDKPQSSGLGLDGLGDLAGLLNEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVRENPDAPGRYLINHGARRYRGSKWAHKTTIPAFIDNDYNEADQVIENLQRNELTAREIADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGRGKDVTVINELVTAYKKNPDEVAAWLADDSQELTRGSVKLLREFLEDKRSHEDGDRDPNTVDALTGKTDAEAGDGEQGPQDDDAKGKKEPKEADPDKLKKAIIQVKHDDRPARLILNRRPPAEGWAWLKYEDDGQEFEADLGTVQLVALLEG
SIO_010081: I6H84_RS28510
subclass of: SO_0000673
so part of: I6H84_RS28510
location: 37306..38355
location: region:37306-38355:1
so has part: feature:37306-38355:1:exon

WP_011114060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37306-38355:1:exon