Lactobacillus intestinalis strain DSM 6629 plasmid unnamed1.
type: Entry
definition: Lactobacillus intestinalis strain DSM 6629 plasmid unnamed1.
sequence version: NZ_CP072984.1
sequence date: 2022-09-28
sequence: sequence
division: CON
label: NZ_CP072984.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18709981
keyword: RefSeq
source: Lactobacillus intestinalis
organism: Lactobacillus intestinalis
taxonomy: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP072984.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT Link v. v5.0.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 462.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/28/2022 20:51:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,925\nCDSs (total) :: 1,851\nGenes (coding) :: 1,806\nCDSs (with protein) :: 1,806\nGenes (RNA) :: 74\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 3\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 15 of 45\nPseudo Genes (incomplete) :: 28 of 45\nPseudo Genes (internal stop) :: 10 of 45\nPseudo Genes (multiple problems) :: 7 of 45\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 19578
topology: linear
so has quality: SO_0000987
location: 1..19578
location: region:1-19578:1
RO_0002162: 151781

NZ_CP072984
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18709981
type: BioSample
SIO_000068: biosample

1
title: Lactobacillus intestinalis-derived indole-3-propionic acid mediates benefits of maternal tryptophan metabolism on offspring intestinal health
author: Chen, S.
journal: Unpublished

2
title: Direct Submission
author: Chen, S.
journal: Submitted (12-APR-2021) Centre of Healthy Animal Husbandry, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Yuandaer Road 644, Furong District, Changsha, Hunan 410125, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19578:1
position: 19578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19578:1:source
so part of: sequence
organism: Lactobacillus intestinalis
mol type: genomic DNA
strain: DSM 6629
isolation source: intestinal lumen
host: Rat
culture collection: DSM:6629
type material: type strain of Lactobacillus intestinalis
plasmid: unnamed1
collection date: 1990

151781
type: Taxonomy
SIO_000068: taxonomy

KBW87_RS08035
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08035
so part of: sequence
location: complement(697..1005)
location: region:697-1005:-1
so has part: feature:697-1005:-1:exon
subclass of: SO_0000010

75117400
type: Gene
SIO_000068: ncbigene

position:697:-1
position: 697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005:-1
position: 1005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697-1005:-1:exon

KBW87_RS08035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAHEKEFLSNIEDLKNTFNTIKKDPSFIYNPNKPAGAHLINIRSVGEGMVEHTEILNAIIVPEWTFNAEFFDENMKLLKFSLKIIMLIKMKVCLKICGRLP
SIO_010081: KBW87_RS08035
subclass of: SO_0000673
so part of: KBW87_RS08035
location: complement(697..1005)
location: region:697-1005:-1
so has part: feature:697-1005:-1:exon

WP_255807306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:697-1005:-1:exon

KBW87_RS08040
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08040
so part of: sequence
location: 1730..2182
location: region:1730-2182:1
so has part: feature:1730-2182:1:exon
subclass of: SO_0000010

75117401
type: Gene
SIO_000068: ncbigene

position:1730:1
position: 1730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182:1
position: 2182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730-2182:1:exon

KBW87_RS08040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLSWIFIHQGWIIYVAIILAIGKRAYIYSVLFHPVVDEYEFSLLYWLFMTANGFYTIWTIFYATGAYVIQTDYVRKEINVKEIRYLIIAQSNEYLFVKDQMLTTPVFYLVQSQINGLNLKYKIIDFSKKFEEIKYEYEAKVRDAKNTES
SIO_010081: KBW87_RS08040
subclass of: SO_0000673
so part of: KBW87_RS08040
location: 1730..2182
location: region:1730-2182:1
so has part: feature:1730-2182:1:exon

WP_236695242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1730-2182:1:exon

KBW87_RS08045
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08045
old locus tag: KBW87_08065
so part of: sequence
location: complement(2335..3210)
location: region:2335-3210:-1
so has part: feature:2335-3210:-1:exon
subclass of: SO_0000010

75117402
type: Gene
SIO_000068: ncbigene

position:2335:-1
position: 2335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3210:-1
position: 3210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2335-3210:-1:exon

KBW87_RS08045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08045
old locus tag: KBW87_08065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012846842.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MKNYVDEKQFKADIRKYAQQNHISGNEIGRLWQEVMLDDLLKRISLSKYKDNFILKGGLLLSAVVGINNRSTEDIDGEIKGFDLTESEIEKVFTVICNTKPDNDPLEIVLIKIEKIHENEEYKGFRLHFNASFKTIRYPLKVDISTGDVITPREIHYNYMPHLENEKIEIWAYNMETVTAEKLETVITRGIANTRMKDFYDLYILQNKNVKINIPTLQAAFINTANYRKSIFYKDGKIDKDYCLQQIDKIQNNQRMQRLWQNYVRKHPFVNDLTFNQTISAARDWIKKIDN
SIO_010081: KBW87_RS08045
subclass of: SO_0000673
so part of: KBW87_RS08045
location: complement(2335..3210)
location: region:2335-3210:-1
so has part: feature:2335-3210:-1:exon

WP_057808761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2335-3210:-1:exon

KBW87_RS08050
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08050
old locus tag: KBW87_08070
so part of: sequence
location: complement(3207..3797)
location: region:3207-3797:-1
so has part: feature:3207-3797:-1:exon
subclass of: SO_0000010

75117403
type: Gene
SIO_000068: ncbigene

position:3207:-1
position: 3207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797:-1
position: 3797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3207-3797:-1:exon

KBW87_RS08050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08050
old locus tag: KBW87_08070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005719553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
translation: MNQQALIKKLAGDHNGTLTHNQLINNNISSYNINLALKSGLLERTRPGIYQESDTTEDIFYSLQQKYKRGVYSLETALYLWNLSDQYPFSLDMTFPRGYNHANLDLDIKAHYQIKSLQDIGITETKSFNGNTIKVYSPERTLAEILRTVNMVDIEIITNAYKTWAKRSKKDINALMDFAEKFKVMDKVNSYLEVLL
SIO_010081: KBW87_RS08050
subclass of: SO_0000673
so part of: KBW87_RS08050
location: complement(3207..3797)
location: region:3207-3797:-1
so has part: feature:3207-3797:-1:exon

WP_057808763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3207-3797:-1:exon

KBW87_RS08055
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08055
old locus tag: KBW87_08075
so part of: sequence
location: complement(3906..4517)
location: region:3906-4517:-1
so has part: feature:3906-4517:-1:exon
subclass of: SO_0000010

75117404
type: Gene
SIO_000068: ncbigene

position:3906:-1
position: 3906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517:-1
position: 4517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3906-4517:-1:exon

KBW87_RS08055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08055
old locus tag: KBW87_08075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014563640.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MRQIVKPIKDSWVLRSVQESLLKDFDLGCRNYTIFQTGKATLLRVSDVLRLKKSDVYDKRGRVKKNAYIIDKKTKKPNTLYLNPIRHDLETYYDWLEKWQKENPTQTVFYSPWLFPSFKRPEKHIDERRYYMIMYKVGKKLNIDYLGTHTMRKTGAYRVYEQTNHNIALVMKLLNHSSEDMTLAYLGLDQETREHILDTIDFG
SIO_010081: KBW87_RS08055
subclass of: SO_0000673
so part of: KBW87_RS08055
location: complement(3906..4517)
location: region:3906-4517:-1
so has part: feature:3906-4517:-1:exon

WP_057808765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3906-4517:-1:exon

KBW87_RS08060
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08060
old locus tag: KBW87_08080
so part of: sequence
location: 5293..5439
location: region:5293-5439:1
so has part: feature:5293-5439:1:exon
subclass of: SO_0000010

75117405
type: Gene
SIO_000068: ncbigene

position:5293:1
position: 5293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5439:1
position: 5439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293-5439:1:exon

KBW87_RS08060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08060
old locus tag: KBW87_08080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010772876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: listeriolysin S family TOMM bacteriocin
translation: MSIISQSSNGYSDTQNPNAMQYASGCCSCSCSCSCSCSCTSAATANLK
SIO_010081: KBW87_RS08060
subclass of: SO_0000673
so part of: KBW87_RS08060
location: 5293..5439
location: region:5293-5439:1
so has part: feature:5293-5439:1:exon

WP_083478827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5293-5439:1:exon

KBW87_RS08065
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08065
old locus tag: KBW87_08085
so part of: sequence
location: 5501..6400
location: region:5501-6400:1
so has part: feature:5501-6400:1:exon
subclass of: SO_0000010

75117406
type: Gene
SIO_000068: ncbigene

position:5501:1
position: 5501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6400:1
position: 6400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501-6400:1:exon

KBW87_RS08065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08065
old locus tag: KBW87_08085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016176865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNEALVLKNLQVILNKKQIINFQGQTIRINQGDKVALLGKNGAGKTTLINAIIGKIPYVGQIYKNFDDNDIGIVFQNNEYSDLMKVKELIDLIFRSKHNRAVNLNKFCQEYNLTELLNKYIKNISVGEKQRLTIGLVLSQTKKIFFLDELTSGLDYEKREFLENDVKTKTKDATVIQITHYFEEIEDWANKIIILDQGKLLFQGSIKEILKEYPHYSCIKVVNIDKKIYQSLLKRWPDIQIYNNRIFTKNIIQNTEVTNFLSQSLIPYQVKKGNIYTTYLLVVGKSNGTKSNSKFENAI
SIO_010081: KBW87_RS08065
subclass of: SO_0000673
so part of: KBW87_RS08065
location: 5501..6400
location: region:5501-6400:1
so has part: feature:5501-6400:1:exon

WP_057808767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5501-6400:1:exon

KBW87_RS08070
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08070
old locus tag: KBW87_08090
so part of: sequence
location: 6360..7109
location: region:6360-7109:1
so has part: feature:6360-7109:1:exon
subclass of: SO_0000010

75117407
type: Gene
SIO_000068: ncbigene

position:6360:1
position: 6360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7109:1
position: 7109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6360-7109:1:exon

KBW87_RS08070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08070
old locus tag: KBW87_08090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000608683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVRNLIQSLKMQFRVPIAVFFSLIFPIIMMVTMLISYGNFSIGNGLHFIDKYFLVSISIGILPLALISFPIWVSENIQSKVLERLQYLGVNTYKLMIADLLSYLILAILEIFFNILVARILFNLSIPNFQYVLAFFIQSIYCIFVLFVVGLSFAIIIPNTRVIMPLGMIIMFLTYMFIGVFVRFNELPKKIINISNYLPIKYMTNNFFSIWTGRQLWNGDFLKLNTLWMIITVILTLLVYKFKYRGVTK
SIO_010081: KBW87_RS08070
subclass of: SO_0000673
so part of: KBW87_RS08070
location: 6360..7109
location: region:6360-7109:1
so has part: feature:6360-7109:1:exon

WP_057808769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6360-7109:1:exon

KBW87_RS08075
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08075
old locus tag: KBW87_08095
so part of: sequence
location: 7106..7411
location: region:7106-7411:1
so has part: feature:7106-7411:1:exon
subclass of: SO_0000010

75117408
type: Gene
SIO_000068: ncbigene

position:7106:1
position: 7106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7411:1
position: 7411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7106-7411:1:exon

KBW87_RS08075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08075
old locus tag: KBW87_08095
inference: COORDINATES: protein motif:HMM:NF033904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LlsX family protein
translation: MKKLMHKQEYRIILEIIGGIVLSIVINFVSISIGYTKYFYLDNFKKEYFIKLLGLPIYKIYNKIGTPILANMIFIGVICSILVVFLMELFIARKQRGATND
SIO_010081: KBW87_RS08075
subclass of: SO_0000673
so part of: KBW87_RS08075
location: 7106..7411
location: region:7106-7411:1
so has part: feature:7106-7411:1:exon

WP_057808771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7106-7411:1:exon

KBW87_RS08080
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08080
old locus tag: KBW87_08100
so part of: sequence
location: 7404..8282
location: region:7404-8282:1
so has part: feature:7404-8282:1:exon
subclass of: SO_0000010

75117409
type: Gene
SIO_000068: ncbigene

position:7404:1
position: 7404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8282:1
position: 8282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7404-8282:1:exon

KBW87_RS08080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08080
old locus tag: KBW87_08100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002492035.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SagB family peptide dehydrogenase
translation: MIDIKLKGMLNQHTLAKEDLHNISNSDNHNVYSQLILANANSEMLSYMLNLNHQKLNDFKSMLAYNQINEAGLINEAQYLNEVSDSSVIKLPAPKRQIGVSITKVLSKRHSCRKFSSIPISKRVLSTLLHYSWGTSPRKIYTDSLTINTRYYASGGGLYPIKVYIYCNNVEDMKSGFYLYQPLSNTLLPLSQDKAINIDNFYEGEGIEVSSSNLSVFYGFRVSSLYLKYGELSLLLAIAEVGEMSQNFDLVATSLGLSGCTIAGFKKRYIENILDFDHIDEHILLSSICGKE
SIO_010081: KBW87_RS08080
subclass of: SO_0000673
so part of: KBW87_RS08080
location: 7404..8282
location: region:7404-8282:1
so has part: feature:7404-8282:1:exon

WP_057808773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7404-8282:1:exon

KBW87_RS08085
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08085
old locus tag: KBW87_08105
so part of: sequence
location: 8288..9214
location: region:8288-9214:1
so has part: feature:8288-9214:1:exon
subclass of: SO_0000010

75117410
type: Gene
SIO_000068: ncbigene

position:8288:1
position: 8288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9214:1
position: 9214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8288-9214:1:exon

KBW87_RS08085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08085
old locus tag: KBW87_08105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTYIKPQNVYIENLSDRFKISKGFLHKQTLVIDKEKSSNAFVDAFETFIRNGTISVKIDSDIDKDFKKLAQFDLIHFEIEEKSKNFIVAERNAIDFLKKYLNINSTVVAPDSILSSDDVNTLVNQKDRELSKSISDRVVKNIGDSNLYVILPYNREKIIQAINILTKIKNMPYTLIFFDNRNLFATNIVHGETGCYECLADSIISKFPKDMEYYRNHYFIKSPEKFDISIYGVIISILNNELKNVNLYGDTALRGNVFHLYLPTYESDFDFNKRQTSCTTCSTVNNILFAEQNMKSCEIMKEVLRKC
SIO_010081: KBW87_RS08085
subclass of: SO_0000673
so part of: KBW87_RS08085
location: 8288..9214
location: region:8288-9214:1
so has part: feature:8288-9214:1:exon

WP_057808775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8288-9214:1:exon

KBW87_RS08090
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08090
old locus tag: KBW87_08110
so part of: sequence
location: 9208..10518
location: region:9208-10518:1
so has part: feature:9208-10518:1:exon
subclass of: SO_0000010

75117411
type: Gene
SIO_000068: ncbigene

position:9208:1
position: 9208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10518:1
position: 10518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9208-10518:1:exon

KBW87_RS08090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08090
old locus tag: KBW87_08110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003771347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcaO-like family protein
translation: MLVFQNDLNYNLYRQKLLGGNVSGIWKNNVYFLGASSYPIPKYHYLTAQFNNFEKNIFHDHMSVNYHLSGYGTEYNEALASFLGESSERYSFTLLYKNIKNQIIHATYNDLKKKFPNDLILDLSLINVYFKKKDITHYIEPNDLISWVPMYSLLNSKLKVYVPLQMVVLFDKKIFNKEKRFLNSAVSTGTASQETFKKSIQNAIIEILQIDSYNLWWYGGFTGTKLDVNIKELLQKWFNNESVNNFIKKFDVKFTDISFDKPIPIVVCEISAKDSNLPKYVVGVQGGLNLNKCLYRGFLEALTVLEYCFTTIWNNTEKFKNIKKDISKLSIDNLDDNVIYYAKYGIQNLKRERKCCLEKHKKVNSFNELIKSISKFSKFACYLNITPVEFYNKNFVVSRVLIPELLSLPLPSFPPYYHPRYANIGGILNYVPHPMA
SIO_010081: KBW87_RS08090
subclass of: SO_0000673
so part of: KBW87_RS08090
location: 9208..10518
location: region:9208-10518:1
so has part: feature:9208-10518:1:exon

WP_057808777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9208-10518:1:exon

KBW87_RS08095
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08095
old locus tag: KBW87_08115
so part of: sequence
location: complement(11587..12930)
location: region:11587-12930:-1
so has part: feature:11587-12930:-1:exon
subclass of: SO_0000010

75117412
type: Gene
SIO_000068: ncbigene

position:11587:-1
position: 11587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12930:-1
position: 12930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11587-12930:-1:exon

KBW87_RS08095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08095
old locus tag: KBW87_08115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004896711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSEELNLIEISDEDQNKKLSTIVKMDNDLLVKGFPNFSKKWTPFDIDWWNIIDSQVLDQKDNLIKIPISKVKELMYFRKHITNDEFIKKSNDTLKKFMTIQASLEQEDGDKKIYMNVNIFSQSYIDTDYNAWIRVSPQATKYFNNLSQWTRFALEQATRLHTSYSKKLFMYLKQWRTVGKKTFTLEEFRNALDVPKSYRPGSIDQKILNPTAEYLAPYFMNFRITKNYSKGIRGRKLIGYTFTFRPESKTQKDVGYNKRIEETTHLYSIMTNTFLNVEQKFRAIDRYRGLKLGTTKKYYESAHPQTVFLDPESDHRIKRGITHRSDLYGLSGYKITDLEAIIMTYEDLLKNGKLKEWDLQDLAIIERACFDKQIKLAAKTEHSDKPYIPHRKILINSLVIQLIDSHRLDDYKSESVNLEINRLVRENFGKYKREEDKRPYELKFDFD
SIO_010081: KBW87_RS08095
subclass of: SO_0000673
so part of: KBW87_RS08095
location: complement(11587..12930)
location: region:11587-12930:-1
so has part: feature:11587-12930:-1:exon

WP_057808781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11587-12930:-1:exon

KBW87_RS08100
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08100
old locus tag: KBW87_08120
so part of: sequence
location: complement(13607..14200)
location: region:13607-14200:-1
so has part: feature:13607-14200:-1:exon
subclass of: SO_0000010

75117413
type: Gene
SIO_000068: ncbigene

position:13607:-1
position: 13607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14200:-1
position: 14200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13607-14200:-1:exon

KBW87_RS08100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08100
old locus tag: KBW87_08120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012846839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6037 family protein
translation: MLLKNDMKAKDWTISSFIFVYKNIKYVVLVKRFIDPIKRVKPYALVQLEFMKYNNPQDNYVVEANSNSLLDEIKSIRKYFGIAYGPNMGQLMKQFAQTLNKVVPTQVPNHYDETQLKCLNYSLSQSDSEDPTKIYCYGTIMNPVEKQRSPFNSDKTKLYRPGLFQKLGIESRRSFCYSNDPQKEKTDTEIIANINKQ
SIO_010081: KBW87_RS08100
subclass of: SO_0000673
so part of: KBW87_RS08100
location: complement(13607..14200)
location: region:13607-14200:-1
so has part: feature:13607-14200:-1:exon

WP_236695243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13607-14200:-1:exon

KBW87_RS08105
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08105
old locus tag: KBW87_08125
so part of: sequence
location: 14369..14992
location: region:14369-14992:1
so has part: feature:14369-14992:1:exon
subclass of: SO_0000010

75117414
type: Gene
SIO_000068: ncbigene

position:14369:1
position: 14369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14992:1
position: 14992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14369-14992:1:exon

KBW87_RS08105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08105
old locus tag: KBW87_08125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVTLNNFMISELRAFHLPVNKKNLAKLRNKYTKELKAQQLWENAQTEIRGKSKTKLFKQEDLQQISRKFYKYMTNLVIQESGFSKQEILTEAKKNAQDIEDSQRDWIDFINTHTQEEVYDYQNRYNYDPAPPATEKQKRKGLNELMLKALFDKFFTMNDEQKELFFNDLSTNYWDYEEVGDNPNFVIGQKRLKNPEKYYYSEKKEAD
SIO_010081: KBW87_RS08105
subclass of: SO_0000673
so part of: KBW87_RS08105
location: 14369..14992
location: region:14369-14992:1
so has part: feature:14369-14992:1:exon

WP_057808786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14369-14992:1:exon

KBW87_RS08110
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08110
old locus tag: KBW87_08130
so part of: sequence
location: complement(15113..15418)
location: region:15113-15418:-1
so has part: feature:15113-15418:-1:exon
subclass of: SO_0000010

75117415
type: Gene
SIO_000068: ncbigene

position:15113:-1
position: 15113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15418:-1
position: 15418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15113-15418:-1:exon

KBW87_RS08110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08110
old locus tag: KBW87_08130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004896683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNLINSNKRKINVKPKHEVSINEIEGNDNKKTFNVNIKIDNTVRNSLIAISNLGIAPNQKEAVAYLVQQFRDNLDSDNQRLFDLQVDVLNKKDAKLHENN
SIO_010081: KBW87_RS08110
subclass of: SO_0000673
so part of: KBW87_RS08110
location: complement(15113..15418)
location: region:15113-15418:-1
so has part: feature:15113-15418:-1:exon

WP_057808787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15113-15418:-1:exon

KBW87_RS08115
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08115
old locus tag: KBW87_08135
so part of: sequence
location: complement(15411..16217)
location: region:15411-16217:-1
so has part: feature:15411-16217:-1:exon
subclass of: SO_0000010

75117416
type: Gene
SIO_000068: ncbigene

position:15411:-1
position: 15411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16217:-1
position: 16217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15411-16217:-1:exon

KBW87_RS08115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08115
old locus tag: KBW87_08135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020807713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTKTITFGNFKGGVGKTTNATQVAYELSKRGANTLLLDLDPQANATNIMLKTKANLTDKIDQFDSSLMAAIQNKDLSKALVNITSNLDLIGSSADFSLFPRVMEKQFSRYIDRVKYLNELLSPITKNYDYVIIDVPPTISLITDAALYASDWCVIVMQTQQQALDGASAFIQYMQQEVIDTYKAPSLDLVGILPVLIQPGAPVDNLTLQNAEEEFGQDNILPTSIHQMQRLKRYGVTGITNDSRYDEKVFEVYKQVVNDILNRIEANE
SIO_010081: KBW87_RS08115
subclass of: SO_0000673
so part of: KBW87_RS08115
location: complement(15411..16217)
location: region:15411-16217:-1
so has part: feature:15411-16217:-1:exon

WP_057808789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15411-16217:-1:exon

KBW87_RS08120
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08120
old locus tag: KBW87_08140
so part of: sequence
location: 16732..16950
location: region:16732-16950:1
so has part: feature:16732-16950:1:exon
subclass of: SO_0000010

75117417
type: Gene
SIO_000068: ncbigene

position:16732:1
position: 16732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16950:1
position: 16950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16732-16950:1:exon

KBW87_RS08120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08120
old locus tag: KBW87_08140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004896685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1659 domain-containing protein
translation: MKILSAFTGRKMTVSYMVDGEEKKKSFSLAHVKQDASYENIYTVAQALGSLVNGTVVGTQVSDTNIIDADGE
SIO_010081: KBW87_RS08120
subclass of: SO_0000673
so part of: KBW87_RS08120
location: 16732..16950
location: region:16732-16950:1
so has part: feature:16732-16950:1:exon

WP_004896685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16732-16950:1:exon

KBW87_RS08125
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08125
old locus tag: KBW87_08145
so part of: sequence
location: 16971..17192
location: region:16971-17192:1
so has part: feature:16971-17192:1:exon
subclass of: SO_0000010

75117418
type: Gene
SIO_000068: ncbigene

position:16971:1
position: 16971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17192:1
position: 17192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16971-17192:1:exon

KBW87_RS08125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08125
old locus tag: KBW87_08145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004896686.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2922 domain-containing protein
translation: MNKVLKLIFNNSKGKTSVITLHNPKSVDADTAKAAMQKIIDANIFDNAEINPYATIVGAKYYETQSTPIFDAE
SIO_010081: KBW87_RS08125
subclass of: SO_0000673
so part of: KBW87_RS08125
location: 16971..17192
location: region:16971-17192:1
so has part: feature:16971-17192:1:exon

WP_004896686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16971-17192:1:exon

KBW87_RS08130
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08130
so part of: sequence
location: 17263..17400
location: region:17263-17400:1
so has part: feature:17263-17400:1:exon
subclass of: SO_0000010

75117419
type: Gene
SIO_000068: ncbigene

position:17263:1
position: 17263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17400:1
position: 17400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17263-17400:1:exon

KBW87_RS08130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003547384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YvrJ family protein
translation: MTQEIIRYVLEQASGVVIALVLIIRIESKLDSLTSAIMHLSDSND
SIO_010081: KBW87_RS08130
subclass of: SO_0000673
so part of: KBW87_RS08130
location: 17263..17400
location: region:17263-17400:1
so has part: feature:17263-17400:1:exon

WP_155762261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17263-17400:1:exon

KBW87_RS08135
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08135
old locus tag: KBW87_08150
so part of: sequence
location: 17457..17786
location: region:17457-17786:1
so has part: feature:17457-17786:1:exon
subclass of: SO_0000010

75117420
type: Gene
SIO_000068: ncbigene

position:17457:1
position: 17457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17786:1
position: 17786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17457-17786:1:exon

KBW87_RS08135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08135
old locus tag: KBW87_08150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004896688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MNDINLLGRLTNTPELKKSANGRNYTWFTVAVPRQDNRKEADYIRCLAFDKLASAIYKHCDKGRQVLCQGRLQVSKSIDEVTKQVKYHHTVVVSNTHFLHDPNVSSTSI
SIO_010081: KBW87_RS08135
subclass of: SO_0000673
so part of: KBW87_RS08135
location: 17457..17786
location: region:17457-17786:1
so has part: feature:17457-17786:1:exon

WP_057808791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17457-17786:1:exon

KBW87_RS08140
type: Gene
subclass of: SO_0000704
RO_0002162: 151781
locus tag: KBW87_RS08140
old locus tag: KBW87_08155
so part of: sequence
location: 18248..18820
location: region:18248-18820:1
so has part: feature:18248-18820:1:exon
subclass of: SO_0000010

75117421
type: Gene
SIO_000068: ncbigene

position:18248:1
position: 18248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18820:1
position: 18820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18248-18820:1:exon

KBW87_RS08140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 151781
locus tag: KBW87_RS08140
old locus tag: KBW87_08155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPWTNLDKDLREAIHYPKSYLKEHEDEVVSLLGMSVEEYLKENKKRLEALNAYERKSEKSEDIDSIDENGLLKEDVDRVMGEVESIIAFCAPFYLCAPDRDISYWEESSSPLTQKWLKKVVDNQSTSDYVWIFSEYDFKPFETEADEGDGITQGDPITDDIYEPSYVFLDIKYAKDDFLDEYQKALKNQ
SIO_010081: KBW87_RS08140
subclass of: SO_0000673
so part of: KBW87_RS08140
location: 18248..18820
location: region:18248-18820:1
so has part: feature:18248-18820:1:exon

WP_057808757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18248-18820:1:exon