Erysipelothrix larvae strain LV19 plasmid unnamed, complete sequence.
Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.
Erysipelothrix larvae sp. LV19 isolated from the larval gut of the rhinoceros beetle, Trypoxylus dichotomus
Submitted (21-OCT-2015) Infection and Immunity Research Center, Korea Research Institute Bioscience and Biotechnology, 125 Gwahak-Ro, Deajeon, Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP013214.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: PacBio SMRT Analysis v. 2.3.0\nGenome Coverage :: unspecified\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 20:02:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,384\nCDSs (total) :: 2,332\nGenes (coding) :: 2,320\nCDSs (with protein) :: 2,320\nGenes (RNA) :: 52\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 3\nPseudo Genes (total) :: 12\nCDSs (without protein) :: 12\nPseudo Genes (ambiguous residues) :: 0 of 12\nPseudo Genes (frameshifted) :: 1 of 12\nPseudo Genes (incomplete) :: 7 of 12\nPseudo Genes (internal stop) :: 4 of 12\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF012457.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013775.2
aminoglycoside phosphotransferase family protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005607572.1
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_004630536.1
COORDINATES: similar to AA sequence:RefSeq:WP_013853332.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003774665.1
COORDINATES: protein motif:HMM:NF013753.2
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040103.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein