Acetoanaerobium sticklandii, complete sequence.
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae; Acetoanaerobium.
Submitted (01-OCT-2010) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
REFSEQ INFORMATION: The reference sequence is identical to\nFP565809.1.\nAnnotation results relative to BLAST similarities, COG\nassignations, enzymatic function prediction (PRIAM software), TMHMM\nand SignalP predictions, and synteny conservation (Syntonizer\nsoftware) are available in the MicroScope annotation system\nhttp://www.genoscope.cns.fr/agc/microscope.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 10:09:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,611\nCDSs (total) :: 2,530\nGenes (coding) :: 2,508\nCDSs (with protein) :: 2,508\nGenes (RNA) :: 81\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 4\nPseudo Genes (total) :: 22\nCDSs (without protein) :: 22\nPseudo Genes (ambiguous residues) :: 0 of 22\nPseudo Genes (frameshifted) :: 6 of 22\nPseudo Genes (incomplete) :: 13 of 22\nPseudo Genes (internal stop) :: 5 of 22\nPseudo Genes (multiple problems) :: 2 of 22\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Acetoanaerobium sticklandii
8.1 : DNA replication, recombination, and repair
COORDINATES: similar to AA sequence:RefSeq:WP_003420483.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002599134.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005366507.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005368191.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_014261695.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009527812.1
COORDINATES: similar to AA sequence:RefSeq:WP_007285196.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261700.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_007285529.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003530970.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_010236047.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_010168129.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_009524289.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013696.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017414679.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005365360.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005211176.1
COORDINATES: similar to AA sequence:RefSeq:WP_009253062.1
glycine/betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_009170945.1
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF025620.2
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015262253.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_008518629.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
betaine/proline/choline family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018307368.1
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002598129.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014825244.1
COORDINATES: similar to AA sequence:RefSeq:WP_003418655.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158703.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_018591177.1
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013658818.1
COORDINATES: similar to AA sequence:RefSeq:WP_018214152.1
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: protein motif:HMM:NF013117.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009080088.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
6.14 : Biosynthesis and degradation of polysaccharides
COORDINATES: protein motif:HMM:NF006968.0
COORDINATES: similar to AA sequence:RefSeq:WP_009262885.1
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590657.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
glutamate/gamma-aminobutyrate family transporter YjeM
COORDINATES: similar to AA sequence:RefSeq:WP_014256664.1
COORDINATES: protein motif:HMM:NF025640.2
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_017417226.1
COORDINATES: protein motif:HMM:NF025054.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360291.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012103476.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003513133.1
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_014184254.1
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014184256.1
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_007061170.1
methylcobalamin--coenzyme M methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005334172.1
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016441258.1
COORDINATES: similar to AA sequence:RefSeq:WP_013238566.1
COORDINATES: similar to AA sequence:RefSeq:WP_009263491.1
COORDINATES: protein motif:HMM:NF013381.2
11.4 : Degradation of proteins, peptides, and glycopeptides
14.2 : Biosynthesis and degradation of murein sacculus and peptidoglycan
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_017751385.1
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003360730.1
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003375632.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271550.1
COORDINATES: protein motif:HMM:NF019320.2
GO:0020037 - heme binding [Evidence IEA]
heme NO-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005209778.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002582880.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_004617830.1
GO:0003824 - catalytic activity [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF019450.2
copper amine oxidase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006859871.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657008.1
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009887752.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009528321.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: similar to AA sequence:RefSeq:WP_003401429.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010073311.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793439.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160685.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004628977.1
COORDINATES: similar to AA sequence:RefSeq:WP_009889567.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010299600.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454554.1
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005213853.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_015520145.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062060.1
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_014520743.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100332.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_013840422.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013119259.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064473.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_009266565.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012101354.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003375742.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013658869.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335339.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009531205.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426870.1
COORDINATES: similar to AA sequence:RefSeq:WP_009172829.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_009526239.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525415.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062376.1
COORDINATES: similar to AA sequence:RefSeq:WP_009081631.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_015552238.1
COORDINATES: protein motif:HMM:NF014232.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF002194.0
GO:0016301 - kinase activity [Evidence IEA]
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
11.3 : Protein folding and stabilization
COORDINATES: similar to AA sequence:RefSeq:WP_003515855.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008907541.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966463.1
COORDINATES: similar to AA sequence:RefSeq:WP_005367721.1
COORDINATES: protein motif:HMM:NF024831.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF002083.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012705478.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009663360.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009530460.1
COORDINATES: protein motif:HMM:NF012356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009172374.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009530408.1
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: similar to AA sequence:RefSeq:WP_016322705.1
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01786
cyclic di-GMP riboswitch class II; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009524481.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524480.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_009524479.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011106342.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524474.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524473.1
COORDINATES: similar to AA sequence:RefSeq:WP_014184751.1
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_013976194.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005584400.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392352.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_009906571.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061346.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003416787.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014186635.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015392356.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061352.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013483447.1
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014262428.1
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: similar to AA sequence:RefSeq:WP_013271384.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: similar to AA sequence:RefSeq:WP_009524411.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525033.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_014519730.1
COORDINATES: protein motif:HMM:TIGR02773.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02785.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158783.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158785.1
COORDINATES: similar to AA sequence:RefSeq:WP_009216250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011723036.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062318.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003366682.1
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_009526204.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526203.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_000441103.1
COORDINATES: protein motif:HMM:TIGR02528.1
EutP/PduV family microcompartment system protein
COORDINATES: similar to AA sequence:RefSeq:WP_017416381.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010237049.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971396.1
ethanolamine ammonia-lyase reactivating factor EutA
COORDINATES: similar to AA sequence:RefSeq:WP_007493537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100323.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003461990.1
GO:0031469 - bacterial microcompartment [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
ethanolamine utilization microcompartment protein EutL
COORDINATES: similar to AA sequence:RefSeq:WP_001301171.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294064.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_003453976.1
COORDINATES: protein motif:HMM:NF014033.2
cobalamin adenosyltransferase in ethanolamine utilization
COORDINATES: protein motif:HMM:NF011652.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971410.1
COORDINATES: similar to AA sequence:RefSeq:WP_009893336.1
COORDINATES: similar to AA sequence:RefSeq:WP_005815263.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005815267.1
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_009618042.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005815271.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516241.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262419.1
7.4 : Cations and iron carrying compounds
15.10 : Adaptations to atypical conditions
COORDINATES: similar to AA sequence:RefSeq:WP_013658314.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011460243.1
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF017944.2
COORDINATES: protein motif:HMM:NF014420.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009904855.1
COORDINATES: protein motif:HMM:NF018058.2
GO:0005887 - integral component of plasma membrane [Evidence IEA]
lipopolysaccharide assembly protein LapA domain-containing protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_007063817.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014768.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_014262782.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003420878.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011860662.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010077487.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_012450721.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009906494.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009079830.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590014.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062101.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001030000.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003356410.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_008907808.1
Lipid A export ATP-binding/permease protein msbA (fragment)
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012201453.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459109.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003480762.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
2.3 : Purine ribonucleotide biosynthesis
COORDINATES: similar to AA sequence:RefSeq:WP_009524642.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011608578.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019213895.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525583.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525584.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525585.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529868.1
COORDINATES: similar to AA sequence:RefSeq:WP_004801992.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529866.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_009262637.1
COORDINATES: protein motif:HMM:NF022996.2
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006782437.1
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: similar to AA sequence:RefSeq:WP_003366778.1
COORDINATES: protein motif:HMM:NF011441.0
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_006568295.1
COORDINATES: protein motif:HMM:NF021489.2
COORDINATES: similar to AA sequence:RefSeq:WP_009297280.1
COORDINATES: similar to AA sequence:RefSeq:WP_014080867.1
COORDINATES: similar to AA sequence:RefSeq:WP_002594897.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214747.1
COORDINATES: protein motif:HMM:TIGR01382.1
COORDINATES: similar to AA sequence:RefSeq:WP_019849223.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590028.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261813.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_002597299.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014261814.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062185.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013656494.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014256141.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014261818.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF012799.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525884.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524760.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018591949.1
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590342.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512884.1
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF016357.2
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002786732.1
COORDINATES: similar to AA sequence:RefSeq:WP_004072505.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512892.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525641.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512896.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525643.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015263561.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0006047 - UDP-N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006778693.1
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160219.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160218.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160217.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160214.1
COORDINATES: similar to AA sequence:RefSeq:WP_000974591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099199.1
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011099200.1
GO:0046522 - S-methyl-5-thioribose kinase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005360318.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011986556.1
COORDINATES: similar to AA sequence:RefSeq:WP_012343477.1
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528318.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017416022.1
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF014375.2
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_015572901.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013360630.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360629.1
COORDINATES: protein motif:HMM:NF017353.2
14.3 : Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides
COORDINATES: similar to AA sequence:RefSeq:WP_014080593.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011723159.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_004849200.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003367138.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_011723156.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013360637.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015573835.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004035312.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003513639.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003422786.1
COORDINATES: protein motif:HMM:NF028468.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012157950.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_012157951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062597.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_010293261.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_012451908.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009083107.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF021391.2
COORDINATES: similar to AA sequence:RefSeq:WP_012065358.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527295.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF019941.2
Cys-Gln thioester bond-forming surface protein
COORDINATES: protein motif:HMM:NF025115.2
DUF3298 and DUF4163 domain-containing protein
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:TIGR02646.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291956.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291952.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_009901743.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013271280.1
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_008721423.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530246.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF022597.2
COORDINATES: protein motif:HMM:NF019487.2
COORDINATES: similar to AA sequence:RefSeq:WP_009906073.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_010964656.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262191.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009894056.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525540.1
COORDINATES: similar to AA sequence:RefSeq:WP_003381282.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000651552.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_006441151.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366286.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525762.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160484.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_003361732.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531206.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009082343.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: similar to AA sequence:RefSeq:WP_025434786.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_006441162.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590922.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_012065331.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590924.1
GO:0050182 - phosphate butyryltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160252.1
COORDINATES: similar to AA sequence:RefSeq:WP_003425471.1
COORDINATES: similar to AA sequence:RefSeq:WP_003420706.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844118.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_008907389.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007789307.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: similar to AA sequence:RefSeq:WP_002844162.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003401499.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_016440300.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261439.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064287.1
COORDINATES: protein motif:HMM:NF022629.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_007059806.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525877.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014261902.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_011099145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099146.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491630.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF027952.2
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF002114.0
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF013168.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010964259.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_016206228.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007061404.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064729.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012058784.1
iron export ABC transporter permease subunit FetB
COORDINATES: similar to AA sequence:RefSeq:WP_016208141.1
COORDINATES: similar to AA sequence:RefSeq:WP_003451687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062330.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063162.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
7.3 : Carbohydrates, organic alcohols, and acids
COORDINATES: similar to AA sequence:RefSeq:WP_005816830.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008907711.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907709.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907708.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008907707.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008907706.1
COORDINATES: similar to AA sequence:RefSeq:WP_015518213.1
COORDINATES: similar to AA sequence:RefSeq:WP_008910035.1
COORDINATES: similar to AA sequence:RefSeq:WP_006439580.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014261856.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009531808.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063173.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657647.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009080767.1
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751908.1
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: similar to AA sequence:RefSeq:WP_009888186.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009888187.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: protein motif:HMM:NF023806.2
COORDINATES: protein motif:HMM:TIGR01167.1
LPXTG cell wall anchor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013379292.1
COORDINATES: similar to AA sequence:RefSeq:WP_004078975.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064903.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064233.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_005604582.1
COORDINATES: similar to AA sequence:RefSeq:WP_003407518.1
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158755.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160178.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: similar to AA sequence:RefSeq:WP_012065258.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059833.1
COORDINATES: protein motif:HMM:NF027593.2
COORDINATES: similar to AA sequence:RefSeq:WP_003417077.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010076029.1
COORDINATES: similar to AA sequence:RefSeq:WP_003232954.1
COORDINATES: similar to AA sequence:RefSeq:WP_002355794.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656474.1
COORDINATES: similar to AA sequence:RefSeq:WP_005214856.1
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_009530214.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160020.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003417102.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_012062322.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_009530456.1
COORDINATES: similar to AA sequence:RefSeq:WP_005367145.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254397.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009891775.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: protein motif:HMM:NF018613.2
COORDINATES: similar to AA sequence:RefSeq:WP_002846659.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262024.1
COORDINATES: similar to AA sequence:RefSeq:WP_009082229.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262022.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590699.1
dicarboxylate/amino acid:cation symporter
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012159979.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_011461593.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005808027.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_015261508.1
COORDINATES: similar to AA sequence:RefSeq:WP_005808031.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_013239948.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF015987.2
COORDINATES: similar to AA sequence:RefSeq:WP_018591803.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159874.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005604658.1
TIGR03905 family TSCPD domain-containing protein
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_003422082.1
2.2 : Nucleotide and nucleoside interconversions
COORDINATES: similar to AA sequence:RefSeq:WP_003422077.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003438795.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514283.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: similar to AA sequence:RefSeq:WP_013485806.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332101.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332103.1
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008908770.1
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012530.2
RNA polymerase sigma-54 factor (fragment)
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016114.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064662.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014262607.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529735.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001231153.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_014262605.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006000540.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009079965.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492946.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: similar to AA sequence:RefSeq:WP_011989355.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003372706.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064772.1
GO:0003924 - GTPase activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003429582.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002843538.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421925.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_007047641.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
putative basic amino acid antiporter YfcC
COORDINATES: similar to AA sequence:RefSeq:WP_017416106.1
GO:0008798 - beta-aspartyl-peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: protein motif:HMM:NF025064.2
GO:0016740 - transferase activity [Evidence IEA]
DegV family EDD domain-containing protein
COORDINATES: protein motif:HMM:NF021462.2
COORDINATES: protein motif:HMM:TIGR01883.1
COORDINATES: similar to AA sequence:RefSeq:WP_006874485.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002595494.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002595493.1
COORDINATES: protein motif:HMM:NF013129.2
COORDINATES: similar to AA sequence:RefSeq:WP_007710069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008410748.1
COORDINATES: similar to AA sequence:RefSeq:WP_018212025.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060729.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272500.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272501.1
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_002585387.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272486.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924793.1
COORDINATES: similar to AA sequence:RefSeq:WP_009255212.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003401777.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160276.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159786.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015260780.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416326.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261602.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971736.1
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_009460977.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158263.1
COORDINATES: similar to AA sequence:RefSeq:WP_004848443.1
COORDINATES: protein motif:HMM:NF018991.2
COORDINATES: protein motif:HMM:NF021524.2
COORDINATES: similar to AA sequence:RefSeq:WP_015051404.1
COORDINATES: similar to AA sequence:RefSeq:WP_015943769.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273359.1
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967718.1
COORDINATES: similar to AA sequence:RefSeq:WP_005216061.1
COORDINATES: similar to AA sequence:RefSeq:WP_004616503.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261931.1
COORDINATES: similar to AA sequence:RefSeq:WP_009169644.1
COORDINATES: similar to AA sequence:RefSeq:WP_003369837.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063317.1
COORDINATES: similar to AA sequence:RefSeq:WP_008726715.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: similar to AA sequence:RefSeq:WP_005923385.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009663421.1
COORDINATES: similar to AA sequence:RefSeq:WP_008411108.1
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: similar to AA sequence:RefSeq:WP_009080667.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119952.1
COORDINATES: similar to AA sequence:RefSeq:WP_007285825.1
COORDINATES: similar to AA sequence:RefSeq:WP_005213651.1
COORDINATES: similar to AA sequence:RefSeq:WP_005213649.1
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009214108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010299773.1
COORDINATES: protein motif:HMM:NF024947.2
SbcC/MukB-like Walker B domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014256421.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183156.1
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014825458.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:TIGR02175.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011641612.1
COORDINATES: protein motif:HMM:NF013974.2
pyruvate synthase subunit porA (pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha)
COORDINATES: similar to AA sequence:RefSeq:WP_006441687.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907394.1
COORDINATES: similar to AA sequence:RefSeq:WP_012101406.1
COORDINATES: similar to AA sequence:RefSeq:WP_013779324.1
COORDINATES: similar to AA sequence:RefSeq:WP_014184997.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261492.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226720.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253544.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314550.1
COORDINATES: similar to AA sequence:RefSeq:WP_005920641.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011971721.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004630153.1
COORDINATES: similar to AA sequence:RefSeq:WP_006443124.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314144.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971725.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074858.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014774.2
COORDINATES: similar to AA sequence:RefSeq:WP_004608104.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064389.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064388.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902334.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF040466.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944846.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844970.1
COORDINATES: protein motif:HMM:NF025745.2
COORDINATES: similar to AA sequence:RefSeq:WP_018213122.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514623.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213120.1
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290702.1
GO:0033958 - DNA-deoxyinosine glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009526517.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591848.1
COORDINATES: similar to AA sequence:RefSeq:WP_005215899.1
nitrite and sulphite reductase 4Fe-4S region
COORDINATES: protein motif:HMM:NF018530.2
COORDINATES: similar to AA sequence:RefSeq:WP_007062760.1
COORDINATES: similar to AA sequence:RefSeq:WP_004464082.1
COORDINATES: similar to AA sequence:RefSeq:WP_003527737.1
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208276.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017826260.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611172.1
GO:0015074 - DNA integration [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017414817.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526377.1
COORDINATES: similar to AA sequence:RefSeq:WP_019595258.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: protein motif:HMM:NF013444.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062393.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008517896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841429.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878581.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013361047.1
formate dehydrogenase H subunit alpha, selenocysteine-containing
COORDINATES: similar to AA sequence:RefSeq:WP_010295098.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374392.1
COORDINATES: similar to AA sequence:RefSeq:WP_009256012.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_008909406.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616619.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_007063269.1
COORDINATES: similar to AA sequence:RefSeq:WP_013237377.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016695 - oxidoreductase activity, acting on hydrogen as donor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008677574.1
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_004630236.1
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: similar to AA sequence:RefSeq:WP_018594220.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012048414.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_016208564.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_019279312.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_003361768.1
COORDINATES: similar to AA sequence:RefSeq:WP_005366309.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254711.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003400051.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527786.1
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF027478.2
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: similar to AA sequence:RefSeq:WP_009527791.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005364498.1
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009525946.1
COORDINATES: similar to AA sequence:RefSeq:WP_007285373.1
COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_009526765.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530798.1
COORDINATES: protein motif:HMM:NF016364.2
COORDINATES: similar to AA sequence:RefSeq:WP_007781318.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183776.1
COORDINATES: similar to AA sequence:RefSeq:WP_006716283.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_009291031.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251867.1
COORDINATES: similar to AA sequence:RefSeq:WP_018085271.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100077.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793122.1
COORDINATES: similar to AA sequence:RefSeq:WP_005815062.1
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158062.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_007062358.1
COORDINATES: protein motif:HMM:TIGR00531.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_005542263.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013240782.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011010223.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011098450.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966841.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374977.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003373931.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_003518603.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003477766.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012343938.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010074151.1
COORDINATES: protein motif:HMM:NF004976.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:TIGR03706.1
GO:0004309 - exopolyphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006798 - polyphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_015616336.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005367839.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_008909764.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_007062595.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_006441051.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422268.1
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: protein motif:HMM:NF024054.2
COORDINATES: similar to AA sequence:RefSeq:WP_006440158.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004612585.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002845027.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_005364614.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064757.1
COORDINATES: protein motif:HMM:NF010675.0
COORDINATES: protein motif:HMM:NF016142.2
COORDINATES: similar to AA sequence:RefSeq:WP_015757312.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065387.1
COORDINATES: similar to AA sequence:RefSeq:WP_003462829.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019214858.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014261777.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022932.2
COORDINATES: similar to AA sequence:RefSeq:WP_009892135.1
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004624376.1
COORDINATES: protein motif:HMM:NF002528.0
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590152.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009892124.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592370.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158314.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065500.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_007490343.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617955.1
COORDINATES: protein motif:HMM:TIGR01195.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516188.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064319.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013724423.1
COORDINATES: similar to AA sequence:RefSeq:WP_011989375.1
COORDINATES: similar to AA sequence:RefSeq:WP_011861999.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003434962.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262147.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065487.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722154.1
COORDINATES: similar to AA sequence:RefSeq:WP_006441131.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013236875.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_012199548.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: similar to AA sequence:RefSeq:WP_012199026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013726610.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003441925.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004453566.1
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_011721333.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003441937.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014261927.1
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_010238459.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012063212.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964857.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421079.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009081452.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011722155.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: similar to AA sequence:RefSeq:WP_003425750.1
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:TIGR02469.1
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_006439620.1
cobalt-factor II C(20)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005365171.1
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_009898660.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009526020.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: similar to AA sequence:RefSeq:WP_018592295.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006439622.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009891946.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592311.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_012200074.1
COORDINATES: similar to AA sequence:RefSeq:WP_008718891.1
COORDINATES: similar to AA sequence:RefSeq:WP_007871483.1
COORDINATES: similar to AA sequence:RefSeq:WP_007871485.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158256.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591221.1
COORDINATES: similar to AA sequence:RefSeq:WP_003541796.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260834.1
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007062484.1
COORDINATES: similar to AA sequence:RefSeq:WP_010299562.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010297421.1
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_013725830.1
COORDINATES: similar to AA sequence:RefSeq:WP_017751054.1
COORDINATES: similar to AA sequence:RefSeq:WP_003418765.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256422.1
COORDINATES: similar to AA sequence:RefSeq:WP_015042830.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_013273422.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273421.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006523746.1
BREX-1 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_015541864.1
COORDINATES: similar to AA sequence:RefSeq:WP_005344762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273415.1
COORDINATES: similar to AA sequence:RefSeq:WP_013977773.1
protease Lon-related BREX system protein BrxL
COORDINATES: similar to AA sequence:RefSeq:WP_011462288.1
COORDINATES: similar to AA sequence:RefSeq:WP_010296612.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003487471.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971672.1
COORDINATES: protein motif:HMM:NF027433.2
COORDINATES: similar to AA sequence:RefSeq:WP_009171004.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358592.1
COORDINATES: protein motif:HMM:NF024248.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_008370317.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526142.1
COORDINATES: similar to AA sequence:RefSeq:WP_005330321.1
prolyl-tRNA synthetase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002566787.1
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013361273.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491048.1
COORDINATES: similar to AA sequence:RefSeq:WP_008689714.1
COORDINATES: similar to AA sequence:RefSeq:WP_015573760.1
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: protein motif:HMM:NF012400.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_012451612.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003519369.1
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: similar to AA sequence:RefSeq:WP_003517033.1
COORDINATES: similar to AA sequence:RefSeq:WP_011009824.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415540.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376106.1
COORDINATES: similar to AA sequence:RefSeq:WP_003375071.1
COORDINATES: similar to AA sequence:RefSeq:WP_010299806.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010156.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013843758.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_003416528.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359952.1
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:TIGR04535.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065385.1
family 1 encapsulin nanocompartment shell protein
COORDINATES: similar to AA sequence:RefSeq:WP_013656977.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525927.1
COORDINATES: similar to AA sequence:RefSeq:WP_003417931.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_009531627.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064722.1
COORDINATES: similar to AA sequence:RefSeq:WP_009888350.1
RusA family crossover junction endodeoxyribonuclease
COORDINATES: protein motif:HMM:NF024875.2
COORDINATES: similar to AA sequence:RefSeq:WP_009525490.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_007286520.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_003429657.1
GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
COORDINATES: similar to AA sequence:RefSeq:WP_006439079.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158813.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003416870.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948884.1
COORDINATES: similar to AA sequence:RefSeq:WP_209659597.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: similar to AA sequence:RefSeq:WP_013361327.1
GO:0030700 - glycine reductase complex [Evidence IEA]
GO:0030699 - glycine reductase activity [Evidence IEA]
glycine reductase complex selenoprotein B
COORDINATES: similar to AA sequence:RefSeq:WP_012158818.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012158819.1
glycine/sarcosine/betaine reductase complex component C subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018590026.1
COORDINATES: similar to AA sequence:RefSeq:WP_008754162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059309.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517330.1
COORDINATES: similar to AA sequence:RefSeq:WP_012424584.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160199.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013657392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159831.1
COORDINATES: similar to AA sequence:RefSeq:WP_009904969.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013380524.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
10.2 : Ribosomal proteins: synthesis and modification
COORDINATES: similar to AA sequence:RefSeq:WP_011721840.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159826.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060131.1
COORDINATES: similar to AA sequence:RefSeq:WP_003428570.1
COORDINATES: similar to AA sequence:RefSeq:WP_009888868.1
COORDINATES: similar to AA sequence:RefSeq:WP_000545520.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524639.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009082348.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009528607.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376551.1
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_009526103.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002842766.1
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: similar to AA sequence:RefSeq:WP_011860930.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011877617.1
COORDINATES: similar to AA sequence:RefSeq:WP_005365866.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529705.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525707.1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009531651.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_003436909.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065394.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065393.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065391.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355463.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013381867.1
carbon monoxide dehydrogenase accessory protein CooC
COORDINATES: similar to AA sequence:RefSeq:WP_014355320.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013240368.1
cyclodeaminase/cyclohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007061834.1
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016729430.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063165.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592066.1
COORDINATES: similar to AA sequence:RefSeq:WP_003432254.1
acetyl-CoA decarbonylase/synthase complex subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_013381870.1
acetyl-CoA decarbonylase/synthase complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_007061840.1
carbon monoxide dehydrogenase/acetyl-CoA synthase methytransferase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003418359.1
acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_007061842.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061843.1
corrinoid activation/regeneration protein AcsV
COORDINATES: similar to AA sequence:RefSeq:WP_003418375.1
COORDINATES: similar to AA sequence:RefSeq:WP_003418377.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063174.1
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:NF015993.2
GO:0015075 - ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:TIGR01300.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF024641.2
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016728578.1
COORDINATES: protein motif:HMM:NF018627.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158592.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007286458.1
COORDINATES: similar to AA sequence:RefSeq:WP_018592011.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_020492969.1
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: protein motif:HMM:NF017967.2
COORDINATES: protein motif:HMM:NF014676.2
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_015513191.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513192.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513193.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513194.1
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004614155.1
COORDINATES: similar to AA sequence:RefSeq:WP_016222131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624837.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354859.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071837.1
COORDINATES: similar to AA sequence:RefSeq:WP_002604844.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071835.1
COORDINATES: similar to AA sequence:RefSeq:WP_009062892.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071833.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009322072.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_011721088.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_004461546.1
COORDINATES: similar to AA sequence:RefSeq:WP_009268344.1
COORDINATES: similar to AA sequence:RefSeq:WP_003401008.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361435.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282923.1
COORDINATES: protein motif:HMM:NF024068.2
COORDINATES: similar to AA sequence:RefSeq:WP_009531224.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_009525305.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002845575.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_003516326.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009083731.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007286811.1
COORDINATES: similar to AA sequence:RefSeq:WP_003428202.1
COORDINATES: similar to AA sequence:RefSeq:WP_008119413.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009644671.1
COORDINATES: similar to AA sequence:RefSeq:WP_003419557.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909077.1
nitric oxide reductase activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_012064631.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287045.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014312294.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:TIGR00614.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: similar to AA sequence:RefSeq:WP_014253588.1
COORDINATES: similar to AA sequence:RefSeq:WP_010233412.1
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245824.1
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: protein motif:HMM:NF022987.2
COORDINATES: similar to AA sequence:RefSeq:WP_013720986.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423319.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_010293009.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007285900.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064253.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159510.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263139.1
GO:0015661 - L-lysine efflux transmembrane transporter activity [Evidence IEA]
GO:1903401 - L-lysine transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909896.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063501.1
GlmL-related ornithine degradation protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361503.1
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: similar to AA sequence:RefSeq:WP_013361504.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159549.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: similar to AA sequence:RefSeq:WP_013361506.1
2-amino-4-oxopentanoate thiolase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009259000.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589170.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003371925.1
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005365574.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592145.1
COORDINATES: protein motif:HMM:TIGR03994.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159564.1
COORDINATES: similar to AA sequence:RefSeq:WP_003426448.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422921.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003426450.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063478.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063477.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262460.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002842759.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003451606.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286274.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_009526272.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_017751305.1
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528149.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012159631.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063364.1
COORDINATES: protein motif:HMM:TIGR00257.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_007286314.1
COORDINATES: protein motif:HMM:NF013100.2
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009524608.1
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003375470.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003419216.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287334.1
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_007287336.1
COORDINATES: protein motif:HMM:NF022824.2
COORDINATES: similar to AA sequence:RefSeq:WP_007788084.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:TIGR01529.1
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015524459.1
COORDINATES: similar to AA sequence:RefSeq:WP_009082278.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063634.1
4 : Biosynthesis of cofactors, prosthetic groups, and carriers
COORDINATES: similar to AA sequence:RefSeq:WP_009527050.1
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF013012.2
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_020814561.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_006440053.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003419113.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_004082978.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603049.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_008909027.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011592930.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009531755.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009524985.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656911.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004613698.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009527284.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527285.1
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012159601.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_009531463.1
COORDINATES: similar to AA sequence:RefSeq:WP_003419086.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063436.1
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_012063435.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF021653.2
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_003428473.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361591.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413413.1
COORDINATES: protein motif:HMM:NF012700.2
MutS-like ATPase involved in mismatch repair, family 2
COORDINATES: similar to AA sequence:RefSeq:WP_013361595.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361596.1
L-erythro-3,5-diaminohexanoate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013361597.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293644.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007285828.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]; GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527838.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063428.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_009527836.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:WP_001013377.1
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063417.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525486.1
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063415.1
COORDINATES: similar to AA sequence:RefSeq:WP_009079738.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_003419041.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_012063412.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017856.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009527325.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361625.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362175.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361621.1
COORDINATES: similar to AA sequence:RefSeq:WP_003359029.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287699.1
COORDINATES: similar to AA sequence:RefSeq:WP_004627999.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274805.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274229.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_013274803.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967570.1
COORDINATES: similar to AA sequence:RefSeq:WP_015523303.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017415770.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014256391.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018214525.1
COORDINATES: protein motif:HMM:NF014425.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019849190.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF008687.0
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014356615.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_002603119.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012158887.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356617.1
COORDINATES: similar to AA sequence:RefSeq:WP_007870709.1
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF026954.2
HpcH/HpaI aldolase/citrate lyase family protein
COORDINATES: protein motif:HMM:TIGR01893.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063343.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525897.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159667.1
COORDINATES: similar to AA sequence:RefSeq:WP_013725706.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355222.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_077575701.1
double-cubane-cluster-containing anaerobic reductase
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971597.1
COORDINATES: protein motif:HMM:TIGR01805.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528159.1
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009902261.1
SH3 domain-containing C40 family peptidase
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005830549.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866776.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159415.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_009525425.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012159417.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_009531191.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008908593.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010239363.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008514455.1
COORDINATES: similar to AA sequence:RefSeq:WP_008409912.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006520711.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012159427.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516190.1
oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009890007.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314697.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589657.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_014262953.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530403.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159513.1
COORDINATES: similar to AA sequence:RefSeq:WP_009889069.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063590.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159517.1
COORDINATES: similar to AA sequence:RefSeq:WP_003428286.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063583.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_003451075.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007788923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262165.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_003438268.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
GTP-sensing pleiotropic transcriptional regulator CodY
COORDINATES: similar to AA sequence:RefSeq:WP_014262163.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024731.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_013655874.1
COORDINATES: protein motif:HMM:NF013954.2
COORDINATES: similar to AA sequence:RefSeq:WP_014357414.1
COORDINATES: protein motif:HMM:NF021583.2
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF021648.2
COORDINATES: similar to AA sequence:RefSeq:WP_007492092.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017144512.1
PBSX family phage terminase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012720932.1
GO:0051276 - chromosome organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF019886.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013282971.1
COORDINATES: protein motif:HMM:NF020341.2
COORDINATES: similar to AA sequence:RefSeq:WP_009527456.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857541.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815299.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004057594.1
COORDINATES: protein motif:HMM:NF025655.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_017895743.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF019945.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590420.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_006426842.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011948822.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722276.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_009525363.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009529823.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF040034.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440102.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006440098.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381177.1
COORDINATES: similar to AA sequence:RefSeq:WP_005945260.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_007287297.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005587773.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526692.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009531009.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009530985.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530895.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003438208.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287305.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003419314.1
COORDINATES: similar to AA sequence:RefSeq:WP_009889023.1
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011722406.1
COORDINATES: similar to AA sequence:RefSeq:WP_016286182.1
COORDINATES: similar to AA sequence:RefSeq:WP_016117154.1
alanine/glycine:cation symporter family protein
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262637.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_012158175.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:TIGR01093.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015357890.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_010235784.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
COORDINATES: similar to AA sequence:RefSeq:WP_005808122.1
COORDINATES: similar to AA sequence:RefSeq:WP_013279454.1
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003445372.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994001.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293267.1
COORDINATES: similar to AA sequence:RefSeq:WP_012341969.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004618860.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062888.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063601.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005364958.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529599.1
COORDINATES: similar to AA sequence:RefSeq:WP_003543440.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062275.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208296.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
TIGR03915 family putative DNA repair protein
COORDINATES: protein motif:HMM:NF015909.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158768.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017413452.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356421.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356422.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825453.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014314642.1
COORDINATES: protein motif:HMM:NF040016.1
COORDINATES: similar to AA sequence:RefSeq:WP_007785583.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679843.1
COORDINATES: similar to AA sequence:RefSeq:WP_018595347.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971378.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971377.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007062539.1
COORDINATES: similar to AA sequence:RefSeq:WP_004065183.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357762.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063282.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063281.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063280.1
COORDINATES: similar to AA sequence:RefSeq:WP_009898634.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908305.1
COORDINATES: similar to AA sequence:RefSeq:WP_015542449.1
COORDINATES: similar to AA sequence:RefSeq:WP_003436250.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003416974.1
COORDINATES: similar to AA sequence:RefSeq:WP_016728492.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013121110.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530247.1
COORDINATES: similar to AA sequence:RefSeq:WP_013810568.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356927.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963835.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003416968.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525779.1
COORDINATES: similar to AA sequence:RefSeq:WP_003429119.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526771.1
COORDINATES: similar to AA sequence:RefSeq:WP_002842633.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017212878.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012059958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010757.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160092.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907511.1
COORDINATES: similar to AA sequence:RefSeq:WP_003363906.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528342.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721421.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0006824 - cobalt ion transport [Evidence IEA]
energy-coupling factor ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361881.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009526530.1
COORDINATES: protein motif:HMM:NF013890.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_002575758.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_003428216.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287239.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287240.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006426702.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: similar to AA sequence:RefSeq:WP_009530962.1
COORDINATES: similar to AA sequence:RefSeq:WP_003438316.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015925174.1
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009905403.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_009889095.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000036339.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261980.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002843724.1
COORDINATES: similar to AA sequence:RefSeq:WP_009889093.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003428240.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589650.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009530928.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003424492.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007788072.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528422.1
COORDINATES: similar to AA sequence:RefSeq:WP_003430598.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
2.4 : Pyrimidine ribonucleotide biosynthesis
COORDINATES: similar to AA sequence:RefSeq:WP_007060083.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009531438.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844082.1
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_005365092.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_009527067.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527068.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527069.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009529054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255125.1
chemotaxis response regulator protein-glutamate methylesterase
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009529057.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063828.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159355.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004621987.1
COORDINATES: similar to AA sequence:RefSeq:WP_016206577.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009082520.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527083.1
COORDINATES: protein motif:HMM:NF015693.2
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF025057.2
COORDINATES: similar to AA sequence:RefSeq:WP_009525395.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063840.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525397.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063843.1
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
6.4 : ATP-proton motive force interconversion
COORDINATES: similar to AA sequence:RefSeq:WP_012063847.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_003517950.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527096.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_015925501.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529070.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160375.1
COORDINATES: similar to AA sequence:RefSeq:WP_005367357.1
COORDINATES: similar to AA sequence:RefSeq:WP_003432157.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677397.1
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: similar to AA sequence:RefSeq:WP_007286785.1
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_003429425.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591283.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681128.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_009889257.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063297.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003419881.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_009889251.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO:0008153 - para-aminobenzoic acid biosynthetic process [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: similar to AA sequence:RefSeq:WP_003419873.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004446797.1
COORDINATES: similar to AA sequence:RefSeq:WP_017752451.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525119.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005368070.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262685.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531515.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007788980.1
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_009897628.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009890647.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007287804.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625403.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159104.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525467.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529466.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254616.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_003430905.1
COORDINATES: similar to AA sequence:RefSeq:WP_005367905.1
COORDINATES: similar to AA sequence:RefSeq:WP_011591025.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005366797.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_009524971.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007287814.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000043938.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000034699.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531160.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262202.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
COORDINATES: protein motif:HMM:NF014713.2
cytochrome c biogenesis CcdA family protein
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_015523378.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF004820.0
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010246673.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001030947.1
COORDINATES: similar to AA sequence:RefSeq:WP_009890686.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_006440894.1
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006782175.1
COORDINATES: protein motif:HMM:NF022659.2
COORDINATES: similar to AA sequence:RefSeq:WP_014262687.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007064052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159793.1
COORDINATES: similar to AA sequence:RefSeq:WP_010232951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065292.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_017416497.1
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: similar to AA sequence:RefSeq:WP_018593205.1
COORDINATES: similar to AA sequence:RefSeq:WP_003451262.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011098479.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017413282.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722158.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003375556.1
COORDINATES: similar to AA sequence:RefSeq:WP_015311347.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011721830.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007062293.1
COORDINATES: similar to AA sequence:RefSeq:WP_015540612.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: similar to AA sequence:RefSeq:WP_014262858.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011861601.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527116.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063895.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525116.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589794.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009893669.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_009525069.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003517651.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_008909440.1
COORDINATES: protein motif:HMM:NF014078.2
COORDINATES: similar to AA sequence:RefSeq:WP_011861609.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015534815.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002845252.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00690.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_007790564.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010292837.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286545.1
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589811.1
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007858074.1
COORDINATES: similar to AA sequence:RefSeq:WP_019162867.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907473.1
COORDINATES: similar to AA sequence:RefSeq:WP_003232127.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_008975713.1
11.1 : Protein and peptide secretion and trafficking
COORDINATES: similar to AA sequence:RefSeq:WP_006440035.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016729405.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159268.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_012058337.1
COORDINATES: similar to AA sequence:RefSeq:WP_007788684.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589824.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063921.1
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_014263054.1
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009084146.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002844821.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004367 - glycerol-3-phosphate dehydrogenase [NAD+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005366035.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_007789801.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528791.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589844.1
COORDINATES: similar to AA sequence:RefSeq:WP_014261993.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589851.1
COORDINATES: similar to AA sequence:RefSeq:WP_003426985.1
COORDINATES: protein motif:HMM:NF015739.2
COORDINATES: similar to AA sequence:RefSeq:WP_005364559.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018589855.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009083501.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_003416067.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_003427006.1
PASTA domain-containing penicillin-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003427011.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262007.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_006439962.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527752.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530971.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624489.1
COORDINATES: similar to AA sequence:RefSeq:WP_006716937.1
COORDINATES: similar to AA sequence:RefSeq:WP_020458025.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018589185.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589184.1
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_009083619.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159209.1
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262175.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_010074920.1
COORDINATES: protein motif:HMM:TIGR01076.1
COORDINATES: similar to AA sequence:RefSeq:WP_002842870.1
COORDINATES: similar to AA sequence:RefSeq:WP_002843063.1
COORDINATES: similar to AA sequence:RefSeq:WP_002844255.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255409.1
COORDINATES: protein motif:HMM:NF017221.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064249.1
COORDINATES: similar to AA sequence:RefSeq:WP_003448677.1
PLP-dependent aminotransferase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_014262254.1
COORDINATES: protein motif:HMM:TIGR00091.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_012062472.1
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_003418878.1
COORDINATES: similar to AA sequence:RefSeq:WP_011877113.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207845.1
COORDINATES: protein motif:HMM:NF013621.2
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:NF012286.2
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_010887922.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355660.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677244.1
COORDINATES: similar to AA sequence:RefSeq:WP_002845557.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907470.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017414197.1
COORDINATES: protein motif:HMM:NF016216.2
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_008719300.1
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007060179.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003493490.1
COORDINATES: similar to AA sequence:RefSeq:WP_013378435.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047711.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012059493.1
COORDINATES: similar to AA sequence:RefSeq:WP_009445264.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_009445259.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: similar to AA sequence:RefSeq:WP_003489914.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011968575.1
COORDINATES: similar to AA sequence:RefSeq:WP_017209999.1
PqqD family peptide modification chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_014183266.1
COORDINATES: similar to AA sequence:RefSeq:WP_017417108.1
COORDINATES: similar to AA sequence:RefSeq:WP_009616382.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158795.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010237653.1
COORDINATES: similar to AA sequence:RefSeq:WP_009080132.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487170.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971656.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004842052.1
COORDINATES: similar to AA sequence:RefSeq:WP_004842051.1
COORDINATES: similar to AA sequence:RefSeq:WP_018598358.1
COORDINATES: similar to AA sequence:RefSeq:WP_004842050.1
COORDINATES: similar to AA sequence:RefSeq:WP_009268453.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_008752595.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014825915.1
COORDINATES: similar to AA sequence:RefSeq:WP_004613994.1
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007061423.1
COORDINATES: similar to AA sequence:RefSeq:WP_003461660.1
COORDINATES: protein motif:HMM:NF016356.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528195.1
COORDINATES: similar to AA sequence:RefSeq:WP_005212916.1
COORDINATES: similar to AA sequence:RefSeq:WP_019189608.1
COORDINATES: protein motif:HMM:NF014844.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_012102171.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925441.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006719045.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013625537.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009530694.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002580034.1
COORDINATES: similar to AA sequence:RefSeq:WP_019224755.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591230.1
YedE family putative selenium transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003494819.1
COORDINATES: similar to AA sequence:RefSeq:WP_003483037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006904015.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619507.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018307158.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006440422.1
COORDINATES: similar to AA sequence:RefSeq:WP_013625650.1
COORDINATES: similar to AA sequence:RefSeq:WP_015943770.1
COORDINATES: protein motif:HMM:NF021501.2
COORDINATES: protein motif:HMM:NF014342.2
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589619.1
COORDINATES: similar to AA sequence:RefSeq:WP_006523635.1
GO:0016002 - sulfite reductase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011590845.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016002 - sulfite reductase activity [Evidence IEA]
anaerobic sulfite reductase subunit AsrB
COORDINATES: similar to AA sequence:RefSeq:WP_011722745.1
anaerobic sulfite reductase subunit AsrA
COORDINATES: similar to AA sequence:RefSeq:WP_003447686.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356390.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099996.1
GO:0050415 - formimidoylglutamase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009005609.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362623.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416275.1
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]
GO:0009093 - cysteine catabolic process [Evidence IEA]; GO:0009087 - methionine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013240254.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530600.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010964200.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073473.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_009526184.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422948.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002485948.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF013109.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063489.1
COORDINATES: protein motif:HMM:NF014904.2
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_012065195.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351274.1
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_017413273.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: similar to AA sequence:RefSeq:WP_015394857.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003356347.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
GO:0030436 - asexual sporulation [Evidence IEA]
sporulation integral membrane protein YtvI
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908974.1
COORDINATES: protein motif:HMM:NF024354.2
COORDINATES: protein motif:HMM:NF020034.2
COORDINATES: similar to AA sequence:RefSeq:WP_017413810.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293220.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183932.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925124.1
COORDINATES: similar to AA sequence:RefSeq:WP_009906504.1
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_010076115.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00545.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059148.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
energy-coupling factor transporter transmembrane component T
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF020249.2
COORDINATES: similar to AA sequence:RefSeq:WP_011641343.1
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_009080371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065168.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03609.1
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF039831.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000635963.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012160115.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015616675.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971492.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160398.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421366.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262443.1
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: similar to AA sequence:RefSeq:WP_009906514.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160403.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354628.1
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971482.1
COORDINATES: similar to AA sequence:RefSeq:WP_000723452.1
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_014262972.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966160.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971477.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160411.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003437846.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014261874.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007287627.1
COORDINATES: similar to AA sequence:RefSeq:WP_003405033.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009524268.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160429.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160433.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116412.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013236838.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007287584.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015358921.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524413.1
COORDINATES: similar to AA sequence:RefSeq:WP_009906538.1
COORDINATES: protein motif:HMM:NF016120.2
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262864.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_017415445.1
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158673.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075046.1
COORDINATES: protein motif:HMM:NF036878.2
COORDINATES: similar to AA sequence:RefSeq:WP_005940562.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607448.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063108.1
COORDINATES: similar to AA sequence:RefSeq:WP_002358470.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018212301.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515879.1
COORDINATES: similar to AA sequence:RefSeq:WP_005366255.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100691.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860635.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158400.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_003435660.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF024704.2
COORDINATES: similar to AA sequence:RefSeq:WP_011967534.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003427733.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003421121.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440523.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065416.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:YP_500957.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003421130.1
COORDINATES: similar to AA sequence:RefSeq:WP_009904768.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009528685.1
COORDINATES: similar to AA sequence:RefSeq:WP_003357513.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524365.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524366.1
COORDINATES: similar to AA sequence:RefSeq:WP_000628816.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421144.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158382.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421149.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524371.1
COORDINATES: similar to AA sequence:RefSeq:WP_003427723.1
COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262831.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262832.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524376.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791566.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158373.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454422.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262838.1
COORDINATES: similar to AA sequence:RefSeq:WP_001127258.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791586.1
COORDINATES: similar to AA sequence:RefSeq:NP_387996.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063218.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413447.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909521.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012063215.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063214.1
COORDINATES: similar to AA sequence:RefSeq:WP_009887863.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421177.1
COORDINATES: similar to AA sequence:RefSeq:WP_001137493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158364.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158362.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_009526279.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_002842856.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590906.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003421188.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158357.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253988.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_014262849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004402360.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282454.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
RNA polymerase sporulation sigma factor SigH
COORDINATES: similar to AA sequence:RefSeq:WP_003425496.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263059.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_009525843.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007062672.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011971804.1
COORDINATES: similar to AA sequence:RefSeq:WP_005540171.1
COORDINATES: similar to AA sequence:RefSeq:WP_008372506.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362442.1
D-proline reductase (dithiol) protein PrdB
COORDINATES: similar to AA sequence:RefSeq:WP_008372499.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362444.1
GO:0050002 - D-proline reductase (dithiol) activity [Evidence IEA]
D-proline reductase (dithiol) proprotein PrdA
COORDINATES: similar to AA sequence:RefSeq:WP_013362445.1
proline reductase-associated electron transfer protein PrdC
COORDINATES: similar to AA sequence:RefSeq:WP_011971796.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380473.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524410.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014262033.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262034.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006572967.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003899275.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009528352.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530919.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590464.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008907992.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004459290.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454342.1
COORDINATES: similar to AA sequence:RefSeq:WP_003482273.1
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: similar to AA sequence:RefSeq:WP_016208226.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013238391.1
COORDINATES: similar to AA sequence:RefSeq:WP_009526397.1
COORDINATES: similar to AA sequence:RefSeq:WP_001990088.1
COORDINATES: similar to AA sequence:RefSeq:WP_015756003.1
COORDINATES: similar to AA sequence:RefSeq:WP_015756002.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617149.1
COORDINATES: similar to AA sequence:RefSeq:WP_018592394.1
COORDINATES: similar to AA sequence:RefSeq:WP_003404347.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988219.1
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035875.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059727.1
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016208228.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617571.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009623447.1
COORDINATES: similar to AA sequence:RefSeq:WP_003365952.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060420.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525956.1
COORDINATES: similar to AA sequence:RefSeq:WP_020074525.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018590989.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590990.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_003454253.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_002845767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160306.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_009887996.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_004167125.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_014262985.1
COORDINATES: similar to AA sequence:RefSeq:WP_009887990.1
COORDINATES: protein motif:HMM:NF014604.2
COORDINATES: similar to AA sequence:RefSeq:WP_003228021.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014255004.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062060.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966558.1
COORDINATES: similar to AA sequence:RefSeq:WP_147568592.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014262978.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009524393.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_010166986.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263143.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263144.1
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009527348.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263147.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263148.1
COORDINATES: protein motif:HMM:NF014094.2
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012062009.1
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: similar to AA sequence:RefSeq:WP_009525982.1
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: similar to AA sequence:RefSeq:WP_009643478.1
COORDINATES: similar to AA sequence:RefSeq:WP_009290632.1
COORDINATES: similar to AA sequence:RefSeq:WP_004070327.1
COORDINATES: similar to AA sequence:RefSeq:WP_003502451.1
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116434.1
COORDINATES: similar to AA sequence:RefSeq:WP_012060865.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392062.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392061.1
COORDINATES: similar to AA sequence:RefSeq:WP_003367280.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009528346.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02492.1
COORDINATES: protein motif:HMM:TIGR03824.1
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_009524746.1
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009526535.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528568.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: similar to AA sequence:RefSeq:WP_009525950.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525951.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262215.1
COORDINATES: similar to AA sequence:RefSeq:WP_005366524.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011988015.1
COORDINATES: similar to AA sequence:RefSeq:WP_003412169.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01856.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: protein motif:HMM:NF015284.2
COORDINATES: similar to AA sequence:RefSeq:WP_018213933.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519189.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013362585.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013726530.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447732.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011639784.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065576.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006440978.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527136.1
COORDINATES: similar to AA sequence:RefSeq:WP_003426064.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993408.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010241394.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_013085328.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021446.2
COORDINATES: protein motif:HMM:NF025703.2
COORDINATES: similar to AA sequence:RefSeq:WP_014902070.1
COORDINATES: similar to AA sequence:RefSeq:WP_003229415.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246426.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014520197.1
COORDINATES: similar to AA sequence:RefSeq:WP_000062149.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362614.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: similar to AA sequence:RefSeq:WP_009289161.1
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003542241.1
ribose ABC transporter substrate-binding protein RbsB
COORDINATES: similar to AA sequence:RefSeq:WP_007059853.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374559.1
COORDINATES: similar to AA sequence:RefSeq:WP_000716140.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018596173.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: similar to AA sequence:RefSeq:WP_003446318.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017210322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014903728.1
COORDINATES: similar to AA sequence:RefSeq:WP_003452951.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014903122.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_007063990.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF009455.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: protein motif:HMM:NF016312.2
COORDINATES: protein motif:HMM:NF006058.0
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062490.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011860947.1
COORDINATES: similar to AA sequence:RefSeq:WP_017352421.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073495.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658913.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160577.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362653.1
COORDINATES: similar to AA sequence:RefSeq:WP_010233560.1
COORDINATES: similar to AA sequence:RefSeq:WP_006774360.1
COORDINATES: similar to AA sequence:RefSeq:WP_002603231.1
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: similar to AA sequence:RefSeq:WP_014312375.1
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: similar to AA sequence:RefSeq:WP_004621159.1
COORDINATES: similar to AA sequence:RefSeq:WP_005215290.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_010240784.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_007061690.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014518872.1
COORDINATES: similar to AA sequence:RefSeq:WP_000159477.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964108.1
iron-hydroxamate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014519613.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208587.1
COORDINATES: similar to AA sequence:RefSeq:WP_009171160.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_017415469.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076432.1
COORDINATES: similar to AA sequence:RefSeq:WP_018368562.1
COORDINATES: similar to AA sequence:RefSeq:WP_000933358.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158725.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208139.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002843727.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_014793475.1
COORDINATES: similar to AA sequence:RefSeq:WP_008427777.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160561.1
COORDINATES: similar to AA sequence:RefSeq:WP_018368564.1
COORDINATES: similar to AA sequence:RefSeq:WP_006356290.1
COORDINATES: protein motif:HMM:NF025923.2
COORDINATES: similar to AA sequence:RefSeq:WP_013656566.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603189.1
COORDINATES: similar to AA sequence:RefSeq:WP_003361497.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061245.1
COORDINATES: similar to AA sequence:RefSeq:WP_018598090.1
COORDINATES: protein motif:HMM:NF016413.2
COORDINATES: similar to AA sequence:RefSeq:WP_009253946.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314814.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357589.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357590.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357591.1
COORDINATES: similar to AA sequence:RefSeq:WP_012157994.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059915.1
ClbS/DfsB family four-helix bundle protein
COORDINATES: protein motif:HMM:NF024136.2
COORDINATES: similar to AA sequence:RefSeq:WP_017416646.1
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: similar to AA sequence:RefSeq:WP_002581242.1
COORDINATES: protein motif:HMM:TIGR01389.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005814767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004631227.1
COORDINATES: protein motif:HMM:NF037740.2
COORDINATES: similar to AA sequence:RefSeq:WP_015044504.1
COORDINATES: protein motif:HMM:NF024420.2
COORDINATES: protein motif:HMM:TIGR04141.1
TIGR04141 family sporadically distributed protein
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF017826.2
COORDINATES: protein motif:HMM:NF017894.2
COORDINATES: protein motif:HMM:NF019416.2
COORDINATES: similar to AA sequence:RefSeq:WP_003427593.1
COORDINATES: protein motif:HMM:NF018339.2
BsuBI/PstI family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_013724306.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_012059666.1
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_014184707.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491185.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062631.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160563.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160564.1
COORDINATES: protein motif:HMM:NF014273.2
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_009528034.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074810.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_006439636.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014262481.1
COORDINATES: protein motif:HMM:NF021186.2
two-component system regulatory protein YycI
COORDINATES: similar to AA sequence:RefSeq:WP_009525508.1
COORDINATES: similar to AA sequence:RefSeq:WP_014263227.1
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: protein motif:HMM:NF005304.0
COORDINATES: similar to AA sequence:RefSeq:WP_004452112.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073792.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065716.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253514.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006440975.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262317.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_017210998.1
COORDINATES: similar to AA sequence:RefSeq:WP_003366864.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366548.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971182.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971180.1
COORDINATES: similar to AA sequence:RefSeq:WP_009906589.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF039834.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160702.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160706.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_006440954.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_004843042.1
COORDINATES: similar to AA sequence:RefSeq:WP_003373054.1
COORDINATES: similar to AA sequence:RefSeq:WP_009898860.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_012160709.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063315.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_009892330.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_009527824.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009526048.1