Falco naumanni isolate bFalNau1 chromosome 25, bFalNau1.pat, whole genome shotgun sequence.
type: Entry
definition: Falco naumanni isolate bFalNau1 chromosome 25, bFalNau1.pat, whole genome shotgun sequence.
sequence version: NC_054078.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_054078.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA719130
dblink: SAMN16870685
keyword: WGS
keyword: RefSeq
source: Falco naumanni (lesser kestrel)
organism: Falco naumanni
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030169.1.\nAssembly name: bFalNau1.pat\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGFVS000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; pbgcpp\n v. 1.9.0; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-14; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bFalNau1.pat\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 104.34x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Falco naumanni Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 298424
topology: linear
so has quality: SO_0000987
location: 1..298424
location: region:1-298424:1
RO_0002162: 148594

NC_054078
type: RefSeq
SIO_000068: refseq

PRJNA719130
type: BioProject
SIO_000068: bioproject

SAMN16870685
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298424:1
position: 298424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-298424:1:source
so part of: sequence
organism: Falco naumanni
mol type: genomic DNA
isolate: bFalNau1
specimen voucher: P51P2 - H187058 (nest 2016-P51)
chromosome: 25
sex: female
tissue type: blood
dev stage: juvenile
country: Italy: Matera
lat lon: 40.67 N 16.60 E
collection date: 2016-06-25
collected by: Diego Rubolini

148594
type: Taxonomy
SIO_000068: taxonomy

LOC121080325
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121080325
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 177383..186100
location: region:177383-186100:1
so has part: feature:177383-186100:1:exon
subclass of: SO_0000011

121080325
type: Gene
SIO_000068: ncbigene

position:177383:1
position: 177383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186100:1
position: 186100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177383-186100:1:exon

LOC121080325
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121080325
product: uncharacterized LOC121080325, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005825323.1
SIO_010081: LOC121080325
subclass of: SO_0000673
so part of: LOC121080325
location: join(177383..178203,178580..178693,182569..182623,185196..186100)
location: region:177383-186100:1
so has part: feature:177383-178203:1:exon
so has part: feature:178580-178693:1:exon
so has part: feature:182569-182623:1:exon
so has part: feature:185196-186100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177383-178203:1:exon

position:178203:1
position: 178203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178580-178693:1:exon

position:178580:1
position: 178580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178693:1
position: 178693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182569-182623:1:exon

position:182569:1
position: 182569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182623:1
position: 182623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185196-186100:1:exon

position:185196:1
position: 185196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121080325
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121080325
product: uncharacterized LOC121080325, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005825324.1
SIO_010081: LOC121080325
subclass of: SO_0000673
so part of: LOC121080325
location: join(177383..177622,178025..178203,178580..178693,182569..182623,185196..186100)
location: region:177383-186100:1
so has part: feature:177383-177622:1:exon
so has part: feature:178025-178203:1:exon
so has part: feature:178580-178693:1:exon
so has part: feature:182569-182623:1:exon
so has part: feature:185196-186100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177383-177622:1:exon

position:177622:1
position: 177622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178025-178203:1:exon

position:178025:1
position: 178025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178580-178693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182569-182623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185196-186100:1:exon

PRX
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 191380..196575
location: region:191380-196575:1
so has part: feature:191380-196575:1:exon
subclass of: SO_0000010

121080330
type: Gene
SIO_000068: ncbigene

position:191380:1
position: 191380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196575:1
position: 196575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191380-196575:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PRX
product: periaxin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040578256.1
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(191380..191459,191873..191981,192088..192211,192303..192490,193893..196575)
location: region:191380-196575:1
so has part: feature:191380-191459:1:exon
so has part: feature:191873-191981:1:exon
so has part: feature:192088-192211:1:exon
so has part: feature:192303-192490:1:exon
so has part: feature:193893-196575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191380-191459:1:exon

position:191459:1
position: 191459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191873-191981:1:exon

position:191873:1
position: 191873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191981:1
position: 191981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192088-192211:1:exon

position:192088:1
position: 192088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192211:1
position: 192211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192303-192490:1:exon

position:192303:1
position: 192303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192490:1
position: 192490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:193893-196575:1:exon

position:193893:1
position: 193893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periaxin
translation: MTSPGGGNPPIPPMEEETELVELETAPEAGVRGITVARDRRGLYIAKAPRSLRTYQGDRLVSARIFFEGAPPEDVAQVLEGARSCKVSLCLQHRLPGTPSPLGGTRTSGEGHQGKVARLSIPILTPSKKPPLAPSTVSPAPASPVAVEFALPKLSKLVKSWIAAEPASTAASTPVLPAAEPKRPRATPSRLTVKEAAAGKTPVMELPPVKPEVSGTAVEVLAGPSTRLPAMEVAAPKVTVGLSLAGAMPPAAPQAKEPALRLPQLEVAVPALPLPAAILEPGTTITQPQISLGEEETPSNSRKGRGSPVLKTKLPSFGTATVEDKEGDAGTRGGFAGIRVPSITIAIPSAAVELVPELSVPKPELAIAGEQPRLEVKLPARRSESPPAAPARLTFLETAVPSIDIAVPRVGVGLALPAGASMAAAPAEGDATAMPDVAARFAKGLRKLSLELEPTAALPEVEIASPAQLTGDMLVTGIKPKAPKFTLPRFGLSLTKLKTSSDGDRHPLVAHDTAVPTPPSVAVTSPAVALDLALGMVGATGASAKLKVPKLSLAPFGVKDEGVGGEAHPQDAGAVMKLPRFGIGRSWGDDGRSAELGSPGTPQLRVPQVGIALPAPGSRRVPSLPKLPTGSELGRGLKLPKFGGSSPDIRTGGDSKIMRRGGSAESLSIGTAGRKMLESPGTIWLKLKTKGGMGDGGVQPVTPRFTIPTVGFTVPVKQPEHPASQKIPKPTSMPALKVPVLELAPPGMEEVEETARKDMTPGRWSRVKLPKFGAGFAGSGLEGEGRMRMGSVKKAMLVLVKPKEKGEDNQMVDTHRHINGEAEGKGRRWRWVPRVGFSPREPLTEPPVTQPKGGKMWLPNVELSSRDAKFNQ
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(191937..191981,192088..192211,192303..192490,193893..196154)
location: region:191937-196154:1
so has part: feature:191937-191981:1:exon
so has part: feature:192088-192211:1:exon
so has part: feature:192303-192490:1:exon
so has part: feature:193893-196154:1:exon

XP_040434190.1
type: Protein
SIO_000068: ncbiprotein

position:191937:1
position: 191937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196154:1
position: 196154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191937-191981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192088-192211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192303-192490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193893-196154:1:exon

HIPK4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: HIPK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196620..198590
location: region:196620-198590:1
so has part: feature:196620-198590:1:exon
subclass of: SO_0000010

121080331
type: Gene
SIO_000068: ncbigene

position:196620:1
position: 196620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198590:1
position: 198590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196620-198590:1:exon

HIPK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: HIPK4
product: homeodomain interacting protein kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040578257.1
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 196620..198590
location: region:196620-198590:1
so has part: feature:196620-198590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196620-198590:1:exon

HIPK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: HIPK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 4
translation: MATLVVGAKCYDVVTMVGKGTFGAVAQAWQRSTGEMVAIKMVKNEGHHGRVVKNELRLLQALREVDTEKSHIVRFLESFSDGAYTYLLFESLEQSLFEFQKQNNFLPLPVRHIRTITAQVLAALVKLRELSIIHTDLKPENIMLVDHASYPFRVKLIDFGSASILNEVRHIKTPYIQSRFYRSPEILLGLPFCEKVDMWSLGCVVAELHLGWPLFPGINEYDQVRYICSTLGLPDHELLCAAQKTQSFFQQVPHPTGSWQLKPPGKEMVKPTERRKYAFSSLDQLAAVNTCPVSYPRQEMLARHCDLHGMVELLKRMLTWDSHKRIGPSAALKHPFISLQLMKSKFEATQYYKLCQEDPRASHKDTSTAEIFPGMEKGAFTPRDRRGITQMDGLSLAEPAGDRGDKSQQDIRPIPTHYSTRRPQRHQHPQVGPTAGKSIVLGGRRGRKQRSHGEGGVVVGSMAEQNLPGRPHTSSRAKVWL
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 196950..198395
location: region:196950-198395:1
so has part: feature:196950-198395:1:exon

XP_040434191.1
type: Protein
SIO_000068: ncbiprotein

position:196950:1
position: 196950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198395:1
position: 198395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196950-198395:1:exon

PLD3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199528..204234)
location: region:199528-204234:-1
so has part: feature:199528-204234:-1:exon
subclass of: SO_0000010

121080323
type: Gene
SIO_000068: ncbigene

position:199528:-1
position: 199528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204234:-1
position: 204234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199528-204234:-1:exon

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PLD3
product: phospholipase D family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_040578237.1
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(199528..200020,200123..200222,200298..200463,200532..200674,200759..200959,201118..201245,201337..201457,201591..201774,201856..201995,202149..202199,202551..202618,204094..204234))
location: region:199528-204234:-1
so has part: feature:204094-204234:-1:exon
so has part: feature:202551-202618:-1:exon
so has part: feature:202149-202199:-1:exon
so has part: feature:201856-201995:-1:exon
so has part: feature:201591-201774:-1:exon
so has part: feature:201337-201457:-1:exon
so has part: feature:201118-201245:-1:exon
so has part: feature:200759-200959:-1:exon
so has part: feature:200532-200674:-1:exon
so has part: feature:200298-200463:-1:exon
so has part: feature:200123-200222:-1:exon
so has part: feature:199528-200020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204094-204234:-1:exon

position:204094:-1
position: 204094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202551-202618:-1:exon

position:202551:-1
position: 202551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202618:-1
position: 202618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202149-202199:-1:exon

position:202149:-1
position: 202149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202199:-1
position: 202199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201856-201995:-1:exon

position:201856:-1
position: 201856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201995:-1
position: 201995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201591-201774:-1:exon

position:201591:-1
position: 201591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201774:-1
position: 201774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201337-201457:-1:exon

position:201337:-1
position: 201337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201457:-1
position: 201457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201118-201245:-1:exon

position:201118:-1
position: 201118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201245:-1
position: 201245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:200759-200959:-1:exon

position:200759:-1
position: 200759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200959:-1
position: 200959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:200532-200674:-1:exon

position:200532:-1
position: 200532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200674:-1
position: 200674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200298-200463:-1:exon

position:200298:-1
position: 200298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200463:-1
position: 200463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:200123-200222:-1:exon

position:200123:-1
position: 200123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200222:-1
position: 200222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:199528-200020:-1:exon

position:200020:-1
position: 200020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PLD3
product: phospholipase D family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_040578238.1
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(199528..200020,200123..200222,200298..200463,200532..200671,200759..200959,201118..201245,201337..201457,201591..201774,201856..201995,202149..202199,202551..202618,204094..204233))
location: region:199528-204233:-1
so has part: feature:204094-204233:-1:exon
so has part: feature:202551-202618:-1:exon
so has part: feature:202149-202199:-1:exon
so has part: feature:201856-201995:-1:exon
so has part: feature:201591-201774:-1:exon
so has part: feature:201337-201457:-1:exon
so has part: feature:201118-201245:-1:exon
so has part: feature:200759-200959:-1:exon
so has part: feature:200532-200671:-1:exon
so has part: feature:200298-200463:-1:exon
so has part: feature:200123-200222:-1:exon
so has part: feature:199528-200020:-1:exon

position:204233:-1
position: 204233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204094-204233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202551-202618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202149-202199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201856-201995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201591-201774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201337-201457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201118-201245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200759-200959:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200532-200671:-1:exon

position:200671:-1
position: 200671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200298-200463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200123-200222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199528-200020:-1:exon

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3 isoform X2
translation: MLGEIRFAVFHAGMKPDSTYKQLESLEDPAEQPTHFPPKCSHGVLLLAILLTLFILIFFLFFNLRLSSALGSGADGDARSCGDACRIVLVESIPEGMTFSEGSVLNPSTFSTWMNLLGTVTHSLDIASFYWTMTNEDTRTHELSAAQGEQILEELLQLSQRGVAVRIAVSHPSAKSPLNDLQALERSGAMVRTIDMPRLTGGVLHTKFWLVDGTHLYIGSANMDWRSLTQVKELGTAVYNCSCLAKDLGKIFEAYWALGVPDASIPVPWPANYSTTYNMETPLELKLNDTDAAVYFSSSPPALCAAGRTQDLGALLNVIDTAEDFVDVAVMSYLPTTEFSHPQRFWPAIDNRLRKAIFERRVKVRLLAGCWQHSQVTMFPFLKSLAAVADNRTRYSVEVRLFMVPTSAAQARIPYARVNHNKYMVTEKAAYIGTSNWSGDYFARTAGSALVVNQVVKQTGAGTAAGTSTIREELQAVFERDWNSQYSVDISDAEQWENFCGFR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(199806..200020,200123..200222,200298..200463,200532..200671,200759..200959,201118..201245,201337..201457,201591..201774,201856..201995,202149..202199,202551..202616))
location: region:199806-202616:-1
so has part: feature:202551-202616:-1:exon
so has part: feature:202149-202199:-1:exon
so has part: feature:201856-201995:-1:exon
so has part: feature:201591-201774:-1:exon
so has part: feature:201337-201457:-1:exon
so has part: feature:201118-201245:-1:exon
so has part: feature:200759-200959:-1:exon
so has part: feature:200532-200671:-1:exon
so has part: feature:200298-200463:-1:exon
so has part: feature:200123-200222:-1:exon
so has part: feature:199806-200020:-1:exon

XP_040434172.1
type: Protein
SIO_000068: ncbiprotein

position:199806:-1
position: 199806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202616:-1
position: 202616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202551-202616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202149-202199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201856-201995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201591-201774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201337-201457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201118-201245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200759-200959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200532-200671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200298-200463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200123-200222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199806-200020:-1:exon

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3 isoform X1
translation: MLGEIRFAVFHAGMKPDSTYKQLESLEDPAEQPTHFPPKCSHGVLLLAILLTLFILIFFLFFNLRLSSALGSGADGDARSCGDACRIVLVESIPEGMTFSEGSVLNPSTFSTWMNLLGTVTHSLDIASFYWTMTNEDTRTHELSAAQGEQILEELLQLSQRGVAVRIAVSHPSAKSPLNDLQALERSGAMVRTIDMPRLTGGVLHTKFWLVDGTHLYIGSANMDWRSLTQVKELGTAVYNCSCLAKDLGKIFEAYWALGVPDASIPVPWPANYSTTYNMETPLELKLNDTDAAVYFSQSSPPALCAAGRTQDLGALLNVIDTAEDFVDVAVMSYLPTTEFSHPQRFWPAIDNRLRKAIFERRVKVRLLAGCWQHSQVTMFPFLKSLAAVADNRTRYSVEVRLFMVPTSAAQARIPYARVNHNKYMVTEKAAYIGTSNWSGDYFARTAGSALVVNQVVKQTGAGTAAGTSTIREELQAVFERDWNSQYSVDISDAEQWENFCGFR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(199806..200020,200123..200222,200298..200463,200532..200674,200759..200959,201118..201245,201337..201457,201591..201774,201856..201995,202149..202199,202551..202616))
location: region:199806-202616:-1
so has part: feature:202551-202616:-1:exon
so has part: feature:202149-202199:-1:exon
so has part: feature:201856-201995:-1:exon
so has part: feature:201591-201774:-1:exon
so has part: feature:201337-201457:-1:exon
so has part: feature:201118-201245:-1:exon
so has part: feature:200759-200959:-1:exon
so has part: feature:200532-200674:-1:exon
so has part: feature:200298-200463:-1:exon
so has part: feature:200123-200222:-1:exon
so has part: feature:199806-200020:-1:exon

XP_040434171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202551-202616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202149-202199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201856-201995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201591-201774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201337-201457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201118-201245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200759-200959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200532-200674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200298-200463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200123-200222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199806-200020:-1:exon

C25H19orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204257..209819
location: region:204257-209819:1
so has part: feature:204257-209819:1:exon
subclass of: SO_0000010

121080324
type: Gene
SIO_000068: ncbigene

position:204257:1
position: 204257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209819:1
position: 209819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204257-209819:1:exon

C25H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: C25H19orf47
product: chromosome 25 C19orf47 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_040578242.1
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204257..204325,204613..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..209819)
location: region:204257-209819:1
so has part: feature:204257-204325:1:exon
so has part: feature:204613-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-209819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204257-204325:1:exon

position:204325:1
position: 204325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204613-204681:1:exon

position:204613:1
position: 204613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204681:1
position: 204681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204966-205053:1:exon

position:204966:1
position: 204966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205053:1
position: 205053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205324-205438:1:exon

position:205324:1
position: 205324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205438:1
position: 205438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205552-205633:1:exon

position:205552:1
position: 205552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205633:1
position: 205633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205823-205948:1:exon

position:205823:1
position: 205823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205948:1
position: 205948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206910-207056:1:exon

position:206910:1
position: 206910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207056:1
position: 207056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207409-207479:1:exon

position:207409:1
position: 207409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207479:1
position: 207479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208205-209819:1:exon

position:208205:1
position: 208205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C25H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: C25H19orf47
product: chromosome 25 C19orf47 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040578241.1
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204289..204325,204610..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..209819)
location: region:204289-209819:1
so has part: feature:204289-204325:1:exon
so has part: feature:204610-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-209819:1:exon

position:204289:1
position: 204289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204289-204325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204610-204681:1:exon

position:204610:1
position: 204610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208205-209819:1:exon

C25H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: C25H19orf47
product: chromosome 25 C19orf47 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040578240.1
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204514..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208295..209819)
location: region:204514-209819:1
so has part: feature:204514-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208295-209819:1:exon

position:204514:1
position: 204514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204514-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208295-209819:1:exon

position:208295:1
position: 208295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C25H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: C25H19orf47
product: chromosome 25 C19orf47 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040578239.1
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204516..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..209819)
location: region:204516-209819:1
so has part: feature:204516-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-209819:1:exon

position:204516:1
position: 204516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204516-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208205-209819:1:exon

C25H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: C25H19orf47
product: chromosome 25 C19orf47 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040578244.1
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204516..204681,204966..205053,205489..205633,205823..205948,206910..207056,207409..207479,208205..209819)
location: region:204516-209819:1
so has part: feature:204516-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205489-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-209819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204516-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205489-205633:1:exon

position:205489:1
position: 205489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208205-209819:1:exon

C25H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X1
translation: MGLQPPCPGVLSPALSAGCSGCCRLTHPASSRSAMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDPPPAAPLRQRPHTSKISVTVSNKLAATKAGLGDMADGNPTIPAKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTTATQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204561..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..208684)
location: region:204561-208684:1
so has part: feature:204561-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-208684:1:exon

XP_040434173.1
type: Protein
SIO_000068: ncbiprotein

position:204561:1
position: 204561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208684:1
position: 208684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204561-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208205-208684:1:exon

C25H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X2
translation: MGLQPPCPGVLSPALSAGCSGCCRLTHPASSRSAMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDPPPAAPLRQRPHTSKISVTVSNKLAATKAGLGDMADGNPTIPAKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTTATQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204561..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208295..208684)
location: region:204561-208684:1
so has part: feature:204561-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208295-208684:1:exon

XP_040434174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204561-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208295-208684:1:exon

C25H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X3
translation: MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDPPPAAPLRQRPHTSKISVTVSNKLAATKAGLGDMADGNPTIPAKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTTATQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204663..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..208684)
location: region:204663-208684:1
so has part: feature:204663-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-208684:1:exon

XP_040434175.1
type: Protein
SIO_000068: ncbiprotein

position:204663:1
position: 204663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204663-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208205-208684:1:exon

C25H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X3
translation: MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDPPPAAPLRQRPHTSKISVTVSNKLAATKAGLGDMADGNPTIPAKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTTATQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(204663..204681,204966..205053,205324..205438,205552..205633,205823..205948,206910..207056,207409..207479,208205..208684)
location: region:204663-208684:1
so has part: feature:204663-204681:1:exon
so has part: feature:204966-205053:1:exon
so has part: feature:205324-205438:1:exon
so has part: feature:205552-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-208684:1:exon

XP_040434176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204663-204681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204966-205053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205324-205438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205552-205633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208205-208684:1:exon

C25H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: C25H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X4
translation: MCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDPPPAAPLRQRPHTSKISVTVSNKLAATKAGLGDMADGNPTIPAKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTTATQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C25H19orf47
subclass of: SO_0000673
so part of: C25H19orf47
location: join(205555..205633,205823..205948,206910..207056,207409..207479,208205..208684)
location: region:205555-208684:1
so has part: feature:205555-205633:1:exon
so has part: feature:205823-205948:1:exon
so has part: feature:206910-207056:1:exon
so has part: feature:207409-207479:1:exon
so has part: feature:208205-208684:1:exon

XP_040434178.1
type: Protein
SIO_000068: ncbiprotein

position:205555:1
position: 205555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205555-205633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205823-205948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206910-207056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207409-207479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208205-208684:1:exon

AKT2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210189..219495
location: region:210189-219495:1
so has part: feature:210189-219495:1:exon
subclass of: SO_0000010

121080322
type: Gene
SIO_000068: ncbigene

position:210189:1
position: 210189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219495:1
position: 219495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210189-219495:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040578232.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(210189..210434,213187..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..219495)
location: region:210189-219495:1
so has part: feature:210189-210434:1:exon
so has part: feature:213187-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-219495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210189-210434:1:exon

position:210434:1
position: 210434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213187-213333:1:exon

position:213187:1
position: 213187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213333:1
position: 213333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214341-214469:1:exon

position:214341:1
position: 214341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214469:1
position: 214469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214659-214770:1:exon

position:214659:1
position: 214659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214770:1
position: 214770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214952-215105:1:exon

position:214952:1
position: 214952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215105:1
position: 215105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215280-215411:1:exon

position:215280:1
position: 215280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215411:1
position: 215411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215894-215959:1:exon

position:215894:1
position: 215894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215959:1
position: 215959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216091-216159:1:exon

position:216091:1
position: 216091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216159:1
position: 216159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:216675-216797:1:exon

position:216675:1
position: 216675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216797:1
position: 216797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:217005-217133:1:exon

position:217005:1
position: 217005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217133:1
position: 217133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:217366-217580:1:exon

position:217366:1
position: 217366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217580:1
position: 217580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217651-217738:1:exon

position:217651:1
position: 217651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217738:1
position: 217738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:217832-217934:1:exon

position:217832:1
position: 217832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217934:1
position: 217934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:218203-219495:1:exon

position:218203:1
position: 218203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040578236.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(211360..211450,213187..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..219495)
location: region:211360-219495:1
so has part: feature:211360-211450:1:exon
so has part: feature:213187-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-219495:1:exon

position:211360:1
position: 211360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211360-211450:1:exon

position:211450:1
position: 211450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213187-213333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218203-219495:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040578234.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(211958..212222,213187..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..219495)
location: region:211958-219495:1
so has part: feature:211958-212222:1:exon
so has part: feature:213187-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-219495:1:exon

position:211958:1
position: 211958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211958-212222:1:exon

position:212222:1
position: 212222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213187-213333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218203-219495:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040578235.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(212265..212447,213187..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..219495)
location: region:212265-219495:1
so has part: feature:212265-212447:1:exon
so has part: feature:213187-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-219495:1:exon

position:212265:1
position: 212265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212265-212447:1:exon

position:212447:1
position: 212447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213187-213333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218203-219495:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNLGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(213288..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..218282)
location: region:213288-218282:1
so has part: feature:213288-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-218282:1:exon

XP_040434166.1
type: Protein
SIO_000068: ncbiprotein

position:213288:1
position: 213288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218282:1
position: 218282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213288-213333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218203-218282:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNLGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(213288..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..218282)
location: region:213288-218282:1
so has part: feature:213288-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-218282:1:exon

XP_040434168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213288-213333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218203-218282:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNLGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(213288..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..218282)
location: region:213288-218282:1
so has part: feature:213288-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-218282:1:exon

XP_040434169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213288-213333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218203-218282:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNLGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(213288..213333,214341..214469,214659..214770,214952..215105,215280..215411,215894..215959,216091..216159,216675..216797,217005..217133,217366..217580,217651..217738,217832..217934,218203..218282)
location: region:213288-218282:1
so has part: feature:213288-213333:1:exon
so has part: feature:214341-214469:1:exon
so has part: feature:214659-214770:1:exon
so has part: feature:214952-215105:1:exon
so has part: feature:215280-215411:1:exon
so has part: feature:215894-215959:1:exon
so has part: feature:216091-216159:1:exon
so has part: feature:216675-216797:1:exon
so has part: feature:217005-217133:1:exon
so has part: feature:217366-217580:1:exon
so has part: feature:217651-217738:1:exon
so has part: feature:217832-217934:1:exon
so has part: feature:218203-218282:1:exon

XP_040434170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213288-213333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214341-214469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214659-214770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214952-215105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215280-215411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215894-215959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216091-216159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216675-216797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217005-217133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217366-217580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217651-217738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217832-217934:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218203-218282:1:exon

QPCTL
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: QPCTL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(219655..224575)
location: region:219655-224575:-1
so has part: feature:219655-224575:-1:exon
subclass of: SO_0000010

121080316
type: Gene
SIO_000068: ncbigene

position:219655:-1
position: 219655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224575:-1
position: 224575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219655-224575:-1:exon

QPCTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: QPCTL
product: glutaminyl-peptide cyclotransferase like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040578218.1
SIO_010081: QPCTL
subclass of: SO_0000673
so part of: QPCTL
location: complement(join(219655..219874,220000..220116,220305..220404,220617..220769,221222..221509,221599..221736,224128..224575))
location: region:219655-224575:-1
so has part: feature:224128-224575:-1:exon
so has part: feature:221599-221736:-1:exon
so has part: feature:221222-221509:-1:exon
so has part: feature:220617-220769:-1:exon
so has part: feature:220305-220404:-1:exon
so has part: feature:220000-220116:-1:exon
so has part: feature:219655-219874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224128-224575:-1:exon

position:224128:-1
position: 224128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221599-221736:-1:exon

position:221599:-1
position: 221599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221736:-1
position: 221736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221222-221509:-1:exon

position:221222:-1
position: 221222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221509:-1
position: 221509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:220617-220769:-1:exon

position:220617:-1
position: 220617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220769:-1
position: 220769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:220305-220404:-1:exon

position:220305:-1
position: 220305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220404:-1
position: 220404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:220000-220116:-1:exon

position:220000:-1
position: 220000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220116:-1
position: 220116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219655-219874:-1:exon

position:219874:-1
position: 219874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QPCTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: QPCTL
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glutaminyl-peptide cyclotransferase-like protein
translation: MTSRRHAPGPSAARAPSRALAVVSPARSARGGRGLAPKPRPSPNQRRPRRPVATPPSTRTSYWLRPPQAPPRAMRKGAGGSRRSRVAGSGPGAGPVLVPGPGPGPGRSFCPRSRRCPRPLLPLLPLLALAAAAAIFYSAWSGGERDTGPPLPVPSEQGLRALLGQLDPTRLWVTFLRPLLRERVPGGPGSHAARQHIVGRLVALGATWHLELDAFEAVTPRGPVTFTNVVATAATAAPRRLVLACHYDTKVLPPGLGQQVFLGATDSAVPCAILLELAAALDQPLRRAKDRGAEVTLQLLFLDGEEAFGDWSATDSLYGARHLAAQMATTRHGPHGTQLTAMSLLVLLDLLGARHPAIHSHFTRTHHWFLRLVAIEQRLRRLGLLHAAPQDQPFFRLSPAPGPVEDDHVPFLQRGVPILHLIPTPFPRVWHTLEDTEDNLHPPTVEDLCKILVTFVAEFLQL
SIO_010081: QPCTL
subclass of: SO_0000673
so part of: QPCTL
location: complement(join(219729..219874,220000..220116,220305..220404,220617..220769,221222..221509,221599..221736,224128..224575))
location: region:219729-224575:-1
so has part: feature:224128-224575:-1:exon
so has part: feature:221599-221736:-1:exon
so has part: feature:221222-221509:-1:exon
so has part: feature:220617-220769:-1:exon
so has part: feature:220305-220404:-1:exon
so has part: feature:220000-220116:-1:exon
so has part: feature:219729-219874:-1:exon

XP_040434152.1
type: Protein
SIO_000068: ncbiprotein

position:219729:-1
position: 219729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224128-224575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221599-221736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221222-221509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220617-220769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220305-220404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:220000-220116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219729-219874:-1:exon

FBXO46
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: FBXO46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(225534..229005)
location: region:225534-229005:-1
so has part: feature:225534-229005:-1:exon
subclass of: SO_0000010

121080326
type: Gene
SIO_000068: ncbigene

position:225534:-1
position: 225534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229005:-1
position: 229005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225534-229005:-1:exon

FBXO46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FBXO46
product: F-box protein 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040578245.1
SIO_010081: FBXO46
subclass of: SO_0000673
so part of: FBXO46
location: complement(join(225534..227532,228786..229005))
location: region:225534-229005:-1
so has part: feature:228786-229005:-1:exon
so has part: feature:225534-227532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228786-229005:-1:exon

position:228786:-1
position: 228786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225534-227532:-1:exon

position:227532:-1
position: 227532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FBXO46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 46
translation: MEPNAFPQLQLWCPRPFGTYSQNKPCPGPSSTKKPFSCRTPEEPAGARAPSENTPPAPADAAPVPPASAEEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGTGGTGGAGGRASTMKVKGNWGSDSSKAKRRRRCHDPTKGKPSPAWAASGRDPTRPLPGEPATTGGTSEAADLLSVAEMVALVEQRTALALQSFPRPCGAPTTPVVFVETAGSETKTPSGSDCSRVAEAVAHFESRQREHGGARPNGLCRPGAECATAASAAAAAAPGEVRIAFRISSGREPRASAGAAAEAGAVGRPNCVFMSCGTASGGNAGGRAKDKITCDLYQLISPSRDTLPNNVEFLLAAASPRGDSDGPDMAMGCGEGSATITKAEPGEGTGEGPLASARDCTSGFHVDVVVTGVVDQCVFFGKDSAKKMKEETVRLPAAAQEDPPPGQLFLLPVPEEPPAPDDAETGEELPTVPDPSLCRLYRHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVMVKIFSYLPTQALAALKCSCHYFKSIIETFGVQATDSRWNRDPLYRDDPCKQCKKHYEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRPDKEAPGCRVGLHDNNWVHPAPRRDDGR
SIO_010081: FBXO46
subclass of: SO_0000673
so part of: FBXO46
location: complement(225578..227434)
location: region:225578-227434:-1
so has part: feature:225578-227434:-1:exon

XP_040434179.1
type: Protein
SIO_000068: ncbiprotein

position:225578:-1
position: 225578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227434:-1
position: 227434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225578-227434:-1:exon

GIPR
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230021..239490)
location: region:230021-239490:-1
so has part: feature:230021-239490:-1:exon
subclass of: SO_0000010

121080329
type: Gene
SIO_000068: ncbigene

position:230021:-1
position: 230021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239490:-1
position: 239490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230021-239490:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040578249.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238573,239376..239490))
location: region:230021-239490:-1
so has part: feature:239376-239490:-1:exon
so has part: feature:238479-238573:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239376-239490:-1:exon

position:239376:-1
position: 239376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238573:-1:exon

position:238479:-1
position: 238479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238573:-1
position: 238573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

position:237529:-1
position: 237529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237619:-1
position: 237619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

position:237340:-1
position: 237340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237447:-1
position: 237447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237266:-1:exon

position:237145:-1
position: 237145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237266:-1
position: 237266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

position:233928:-1
position: 233928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234031:-1
position: 234031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

position:233704:-1
position: 233704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233851:-1
position: 233851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

position:232032:-1
position: 232032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232191:-1
position: 232191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

position:231893:-1
position: 231893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231953:-1
position: 231953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

position:231695:-1
position: 231695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231764:-1
position: 231764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

position:231496:-1
position: 231496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231584:-1
position: 231584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

position:230972:-1
position: 230972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231110:-1
position: 231110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

position:230293:-1
position: 230293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230334:-1
position: 230334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

position:230211:-1
position: 230211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040578251.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238573,239400..239446))
location: region:230021-239446:-1
so has part: feature:239400-239446:-1:exon
so has part: feature:238479-238573:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

position:239446:-1
position: 239446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239400-239446:-1:exon

position:239400:-1
position: 239400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040578253.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238551,239400..239435))
location: region:230021-239435:-1
so has part: feature:239400-239435:-1:exon
so has part: feature:238479-238551:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

position:239435:-1
position: 239435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239400-239435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238551:-1:exon

position:238551:-1
position: 238551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040578252.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238551,239376..239431))
location: region:230021-239431:-1
so has part: feature:239376-239431:-1:exon
so has part: feature:238479-238551:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

position:239431:-1
position: 239431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239376-239431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040578254.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237261,237340..237447,237529..237619,238479..238551,239400..239423))
location: region:230021-239423:-1
so has part: feature:239400-239423:-1:exon
so has part: feature:238479-238551:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237261:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

position:239423:-1
position: 239423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239400-239423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237261:-1:exon

position:237261:-1
position: 237261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040578255.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230021..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237261,237340..237447,237529..237619,238479..238551,239376..239421))
location: region:230021-239421:-1
so has part: feature:239376-239421:-1:exon
so has part: feature:238479-238551:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237261:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230021-230211:-1:exon

position:239421:-1
position: 239421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239376-239421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238479-238551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237145-237261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230021-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPSLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238535))
location: region:230050-238535:-1
so has part: feature:238479-238535:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434183.1
type: Protein
SIO_000068: ncbiprotein

position:230050:-1
position: 230050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238535:-1
position: 238535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPSLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238535))
location: region:230050-238535:-1
so has part: feature:238479-238535:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPSLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238535))
location: region:230050-238535:-1
so has part: feature:238479-238535:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPSLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237266,237340..237447,237529..237619,238479..238535))
location: region:230050-238535:-1
so has part: feature:238479-238535:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237266:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X2
translation: MGQRRSAQLRQRWPLGTSTGTPANSACTSTPQHPDLFATAASTCTPAGGMRSPTPPSLSPAPGTCPGTTEGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237261,237340..237447,237529..237619,238479..238489))
location: region:230050-238489:-1
so has part: feature:238479-238489:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237261:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434188.1
type: Protein
SIO_000068: ncbiprotein

position:238489:-1
position: 238489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X2
translation: MGQRRSAQLRQRWPLGTSTGTPANSACTSTPQHPDLFATAASTCTPAGGMRSPTPPSLSPAPGTCPGTTEGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLAFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLLGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGQGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(230050..230211,230293..230334,230972..231110,231496..231584,231695..231764,231893..231953,232032..232191,233704..233851,233928..234031,237145..237261,237340..237447,237529..237619,238479..238489))
location: region:230050-238489:-1
so has part: feature:238479-238489:-1:exon
so has part: feature:237529-237619:-1:exon
so has part: feature:237340-237447:-1:exon
so has part: feature:237145-237261:-1:exon
so has part: feature:233928-234031:-1:exon
so has part: feature:233704-233851:-1:exon
so has part: feature:232032-232191:-1:exon
so has part: feature:231893-231953:-1:exon
so has part: feature:231695-231764:-1:exon
so has part: feature:231496-231584:-1:exon
so has part: feature:230972-231110:-1:exon
so has part: feature:230293-230334:-1:exon
so has part: feature:230050-230211:-1:exon

XP_040434189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238479-238489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237529-237619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237340-237447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237145-237261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233928-234031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233704-233851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232032-232191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231893-231953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231695-231764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231496-231584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230972-231110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230293-230334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230050-230211:-1:exon

OPA3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240614..241497
location: region:240614-241497:1
so has part: feature:240614-241497:1:exon
subclass of: SO_0000010

121080318
type: Gene
SIO_000068: ncbigene

position:240614:1
position: 240614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241497:1
position: 241497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240614-241497:1:exon

OPA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: OPA3
product: outer mitochondrial membrane lipid metabolism regulator OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040578220.1
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(240614..240814,240942..241497)
location: region:240614-241497:1
so has part: feature:240614-240814:1:exon
so has part: feature:240942-241497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240614-240814:1:exon

position:240814:1
position: 240814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240942-241497:1:exon

position:240942:1
position: 240942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optic atrophy 3 protein
translation: MVAGAFPLAKLLTLGARQLSRPLAARIKAGARASPFFRTYICLPPAQLYHWVEMRAKMRLMGFRGAAVKPLNEEAAAELGAELLGEAIVFGVGGLCLYLEYARQAGQTRRREGEQAAALRELREGLEGLRAELEAMAARLPPGPGGLGHAPANLNHAHAGLNHAGANHAPAGANHAPVDANHAPAGANHAHDECSCAPAGASHAPAASSHAPVGTNHASTDPGY
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(240673..240814,240942..241474)
location: region:240673-241474:1
so has part: feature:240673-240814:1:exon
so has part: feature:240942-241474:1:exon

XP_040434154.1
type: Protein
SIO_000068: ncbiprotein

position:240673:1
position: 240673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241474:1
position: 241474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240673-240814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240942-241474:1:exon

LOC121080328
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121080328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243614..249516)
location: region:243614-249516:-1
so has part: feature:243614-249516:-1:exon
subclass of: SO_0000010

121080328
type: Gene
SIO_000068: ncbigene

position:243614:-1
position: 243614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249516:-1
position: 249516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243614-249516:-1:exon

LOC121080328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121080328
product: vasodilator stimulated phosphoprotein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040578248.1
SIO_010081: LOC121080328
subclass of: SO_0000673
so part of: LOC121080328
location: complement(join(243614..244055,244171..244228,244352..244430,244762..244807,244986..245028,245262..245322,245453..245563,245660..245881,246012..246052,246173..246236,246340..246508,249233..249516))
location: region:243614-249516:-1
so has part: feature:249233-249516:-1:exon
so has part: feature:246340-246508:-1:exon
so has part: feature:246173-246236:-1:exon
so has part: feature:246012-246052:-1:exon
so has part: feature:245660-245881:-1:exon
so has part: feature:245453-245563:-1:exon
so has part: feature:245262-245322:-1:exon
so has part: feature:244986-245028:-1:exon
so has part: feature:244762-244807:-1:exon
so has part: feature:244352-244430:-1:exon
so has part: feature:244171-244228:-1:exon
so has part: feature:243614-244055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249233-249516:-1:exon

position:249233:-1
position: 249233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246340-246508:-1:exon

position:246340:-1
position: 246340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246508:-1
position: 246508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246173-246236:-1:exon

position:246173:-1
position: 246173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246236:-1
position: 246236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246012-246052:-1:exon

position:246012:-1
position: 246012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246052:-1
position: 246052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245660-245881:-1:exon

position:245660:-1
position: 245660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245881:-1
position: 245881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245453-245563:-1:exon

position:245453:-1
position: 245453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245563:-1
position: 245563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245262-245322:-1:exon

position:245262:-1
position: 245262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245322:-1
position: 245322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244986-245028:-1:exon

position:244986:-1
position: 244986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245028:-1
position: 245028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:244762-244807:-1:exon

position:244762:-1
position: 244762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244807:-1
position: 244807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244352-244430:-1:exon

position:244352:-1
position: 244352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244430:-1
position: 244430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244171-244228:-1:exon

position:244171:-1
position: 244171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244228:-1
position: 244228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243614-244055:-1:exon

position:244055:-1
position: 244055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121080328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121080328
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vasodilator-stimulated phosphoprotein
translation: MEVPMLGGGGQHPGGPTPQGLPPLLGASPPLPAPGSETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQVVLNCPLGRGLRYSQATPQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHALEDPERRVAPAGTQAMPTGGPPPPPGPPPTPGAPPPPPGPPPATGVPPAPPLPPAAAGGAAGGGSRGVSGFAAAIAGAKLRKVGKDEAPGGGAPPAPPKGDGARGGAGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: LOC121080328
subclass of: SO_0000673
so part of: LOC121080328
location: complement(join(244018..244055,244171..244228,244352..244430,244762..244807,244986..245028,245262..245322,245453..245563,245660..245881,246012..246052,246173..246236,246340..246508,249233..249512))
location: region:244018-249512:-1
so has part: feature:249233-249512:-1:exon
so has part: feature:246340-246508:-1:exon
so has part: feature:246173-246236:-1:exon
so has part: feature:246012-246052:-1:exon
so has part: feature:245660-245881:-1:exon
so has part: feature:245453-245563:-1:exon
so has part: feature:245262-245322:-1:exon
so has part: feature:244986-245028:-1:exon
so has part: feature:244762-244807:-1:exon
so has part: feature:244352-244430:-1:exon
so has part: feature:244171-244228:-1:exon
so has part: feature:244018-244055:-1:exon

XP_040434182.1
type: Protein
SIO_000068: ncbiprotein

position:244018:-1
position: 244018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249512:-1
position: 249512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249233-249512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246340-246508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246173-246236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246012-246052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245660-245881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245453-245563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245262-245322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244986-245028:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244762-244807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244352-244430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244171-244228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244018-244055:-1:exon

NFKBIB
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250454..251373
location: region:250454-251373:1
so has part: feature:250454-251373:1:exon
subclass of: SO_0000010

121080317
type: Gene
SIO_000068: ncbigene

position:250454:1
position: 250454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251373:1
position: 251373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250454-251373:1:exon

NFKBIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFKBIB
product: NFKB inhibitor beta
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040578219.1
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: join(250454..250474,250645..250800,250897..251143,251326..251373)
location: region:250454-251373:1
so has part: feature:250454-250474:1:exon
so has part: feature:250645-250800:1:exon
so has part: feature:250897-251143:1:exon
so has part: feature:251326-251373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250454-250474:1:exon

position:250474:1
position: 250474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250645-250800:1:exon

position:250645:1
position: 250645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250800:1
position: 250800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250897-251143:1:exon

position:250897:1
position: 250897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251143:1
position: 251143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251326-251373:1:exon

position:251326:1
position: 251326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFKBIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFKBIB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: NF-kappa-B inhibitor beta
translation: MGAGGPPGVVPHSPPPHLPPPPQPPPPPPGYTPLHVAVLRKDLEMVELLLSAGADLNKAEPSCGRSPLHLAVEAQSPEVAECLLRAGADPAARMYVGYTPLYSARHRPDPRLPQLLRRFGAQDPPGDSDDSPDEGEGDNSDEEYDDIVINSGRCVD
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: join(250454..250474,250645..250800,250897..251143,251326..251373)
location: region:250454-251373:1
so has part: feature:250454-250474:1:exon
so has part: feature:250645-250800:1:exon
so has part: feature:250897-251143:1:exon
so has part: feature:251326-251373:1:exon

XP_040434153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250454-250474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250645-250800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250897-251143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251326-251373:1:exon

SARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(251705..255952)
location: region:251705-255952:-1
so has part: feature:251705-255952:-1:exon
subclass of: SO_0000010

121080327
type: Gene
SIO_000068: ncbigene

position:251705:-1
position: 251705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255952:-1
position: 255952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251705-255952:-1:exon

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040578247.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(251705..252065,252160..252225,252375..252467,252736..252829,252930..253042,253130..253217,253378..253423,253524..253628,253734..253781,253890..253995,254105..254172,254478..254532,254621..254761,254870..254899,255084..255179,255704..255952))
location: region:251705-255952:-1
so has part: feature:255704-255952:-1:exon
so has part: feature:255084-255179:-1:exon
so has part: feature:254870-254899:-1:exon
so has part: feature:254621-254761:-1:exon
so has part: feature:254478-254532:-1:exon
so has part: feature:254105-254172:-1:exon
so has part: feature:253890-253995:-1:exon
so has part: feature:253734-253781:-1:exon
so has part: feature:253524-253628:-1:exon
so has part: feature:253378-253423:-1:exon
so has part: feature:253130-253217:-1:exon
so has part: feature:252930-253042:-1:exon
so has part: feature:252736-252829:-1:exon
so has part: feature:252375-252467:-1:exon
so has part: feature:252160-252225:-1:exon
so has part: feature:251705-252065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255704-255952:-1:exon

position:255704:-1
position: 255704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255084-255179:-1:exon

position:255084:-1
position: 255084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255179:-1
position: 255179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254870-254899:-1:exon

position:254870:-1
position: 254870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254899:-1
position: 254899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254621-254761:-1:exon

position:254621:-1
position: 254621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254761:-1
position: 254761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:254478-254532:-1:exon

position:254478:-1
position: 254478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254532:-1
position: 254532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254105-254172:-1:exon

position:254105:-1
position: 254105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254172:-1
position: 254172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253890-253995:-1:exon

position:253890:-1
position: 253890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253995:-1
position: 253995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:253734-253781:-1:exon

position:253734:-1
position: 253734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253781:-1
position: 253781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:253524-253628:-1:exon

position:253524:-1
position: 253524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253628:-1
position: 253628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253378-253423:-1:exon

position:253378:-1
position: 253378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253423:-1
position: 253423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:253130-253217:-1:exon

position:253130:-1
position: 253130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253217:-1
position: 253217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:252930-253042:-1:exon

position:252930:-1
position: 252930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253042:-1
position: 253042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:252736-252829:-1:exon

position:252736:-1
position: 252736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252829:-1
position: 252829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:252375-252467:-1:exon

position:252375:-1
position: 252375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252467:-1
position: 252467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:252160-252225:-1:exon

position:252160:-1
position: 252160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252225:-1
position: 252225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:251705-252065:-1:exon

position:252065:-1
position: 252065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040578246.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(251707..252065,252160..252225,252375..252467,252736..252829,252930..253042,253130..253217,253378..253423,253524..253632,253734..253781,253890..253995,254109..254172,254478..254532,254621..254761,254870..254899,255084..255179,255704..255952))
location: region:251707-255952:-1
so has part: feature:255704-255952:-1:exon
so has part: feature:255084-255179:-1:exon
so has part: feature:254870-254899:-1:exon
so has part: feature:254621-254761:-1:exon
so has part: feature:254478-254532:-1:exon
so has part: feature:254109-254172:-1:exon
so has part: feature:253890-253995:-1:exon
so has part: feature:253734-253781:-1:exon
so has part: feature:253524-253632:-1:exon
so has part: feature:253378-253423:-1:exon
so has part: feature:253130-253217:-1:exon
so has part: feature:252930-253042:-1:exon
so has part: feature:252736-252829:-1:exon
so has part: feature:252375-252467:-1:exon
so has part: feature:252160-252225:-1:exon
so has part: feature:251707-252065:-1:exon

position:251707:-1
position: 251707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255704-255952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255084-255179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254870-254899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254621-254761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254478-254532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254109-254172:-1:exon

position:254109:-1
position: 254109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253890-253995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253734-253781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253524-253632:-1:exon

position:253632:-1
position: 253632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253378-253423:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253130-253217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252930-253042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:252736-252829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:252375-252467:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:252160-252225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:251707-252065:-1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X1
translation: MAARRAVGAAVRGWRRAASGGAGAGGGAPGGGGAARSRLYEHVREGRSARPQLDVAALSEREVERRRGALRGSDLGGIVRSWARLGEVRASIARLQAEKDQVAQGVRALLAAHDKETAEALPAYLSLRAQGRQIRLELQQLLAEEAALDEQFYIQALQLPNRTHPEAPVGDESQARVVEVVGEKPAFTFKPKGHLELGESLDIIRQRRLSHVSGHRSYYLCGAGALLQHALVRFAMTKLLSKGFLPMTVPDLLRGAVFEGCGMQPNATPSPIYTIDPSRFEDLCLAGTSEVGIAGYFMDHAVRLEDLPLRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEALLAEFVALQKEIFSELGLHYRVLDMPTEELGLPAYRKFDIEAWMPGRGKYGEISSASNCTDYQSRRLNIMYSDSARRLRHAHTVNGTACAVSRMLIALLECNQLPDGSVRVPPALQPLIGQTVLTRPPAPLLRYISPNQPGGGARGTLSPSPNRGEPPPAAPQPGGGGEGEP
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(251862..252065,252160..252225,252375..252467,252736..252829,252930..253042,253130..253217,253378..253423,253524..253632,253734..253781,253890..253995,254109..254172,254478..254532,254621..254761,254870..254899,255084..255179,255704..255937))
location: region:251862-255937:-1
so has part: feature:255704-255937:-1:exon
so has part: feature:255084-255179:-1:exon
so has part: feature:254870-254899:-1:exon
so has part: feature:254621-254761:-1:exon
so has part: feature:254478-254532:-1:exon
so has part: feature:254109-254172:-1:exon
so has part: feature:253890-253995:-1:exon
so has part: feature:253734-253781:-1:exon
so has part: feature:253524-253632:-1:exon
so has part: feature:253378-253423:-1:exon
so has part: feature:253130-253217:-1:exon
so has part: feature:252930-253042:-1:exon
so has part: feature:252736-252829:-1:exon
so has part: feature:252375-252467:-1:exon
so has part: feature:252160-252225:-1:exon
so has part: feature:251862-252065:-1:exon

XP_040434180.1
type: Protein
SIO_000068: ncbiprotein

position:251862:-1
position: 251862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255937:-1
position: 255937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255704-255937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255084-255179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254870-254899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254621-254761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254478-254532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254109-254172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253890-253995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253734-253781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253524-253632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253378-253423:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253130-253217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252930-253042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:252736-252829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:252375-252467:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:252160-252225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:251862-252065:-1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X2
translation: MAARRAVGAAVRGWRRAASGGAGAGGGAPGGGGAARSRLYEHVREGRSARPQLDVAALSEREVERRRGALRGSDLGGIVRSWARLGEVRASIARLQAEKDQVAQGVRALLAAHDKETAEALPAYLSLRAQGRQIRLELQQLLAEEAALDEQFYIQALQLPNRTHPEAPVGDESQARVVEVVGEKPAFTFKPKGHLELGESLDIIRQRWAPVACLGPSLLLPVRGRGAAAARARALRHDQAALQGFPTHDSPRPAARRRFCCGMQPNATPSPIYTIDPSRFEDLCLAGTSEVGIAGYFMDHAVRLEDLPLRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEALLAEFVALQKEIFSELGLHYRVLDMPTEELGLPAYRKFDIEAWMPGRGKYGEISSASNCTDYQSRRLNIMYSDSARRLRHAHTVNGTACAVSRMLIALLECNQLPDGSVRVPPALQPLIGQTVLTRPPAPLLRYISPNQPGGGARGTLSPSPNRGEPPPAAPQPGGGGEGEP
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(251862..252065,252160..252225,252375..252467,252736..252829,252930..253042,253130..253217,253378..253423,253524..253628,253734..253781,253890..253995,254105..254172,254478..254532,254621..254761,254870..254899,255084..255179,255704..255937))
location: region:251862-255937:-1
so has part: feature:255704-255937:-1:exon
so has part: feature:255084-255179:-1:exon
so has part: feature:254870-254899:-1:exon
so has part: feature:254621-254761:-1:exon
so has part: feature:254478-254532:-1:exon
so has part: feature:254105-254172:-1:exon
so has part: feature:253890-253995:-1:exon
so has part: feature:253734-253781:-1:exon
so has part: feature:253524-253628:-1:exon
so has part: feature:253378-253423:-1:exon
so has part: feature:253130-253217:-1:exon
so has part: feature:252930-253042:-1:exon
so has part: feature:252736-252829:-1:exon
so has part: feature:252375-252467:-1:exon
so has part: feature:252160-252225:-1:exon
so has part: feature:251862-252065:-1:exon

XP_040434181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255704-255937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255084-255179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254870-254899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254621-254761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254478-254532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254105-254172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253890-253995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253734-253781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253524-253628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253378-253423:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253130-253217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252930-253042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:252736-252829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:252375-252467:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:252160-252225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:251862-252065:-1:exon

MRPS12
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(256509..257366)
location: region:256509-257366:-1
so has part: feature:256509-257366:-1:exon
subclass of: SO_0000010

121080320
type: Gene
SIO_000068: ncbigene

position:256509:-1
position: 256509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257366:-1
position: 257366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256509-257366:-1:exon

MRPS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MRPS12
product: mitochondrial ribosomal protein S12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040578231.1
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: complement(join(256509..257052,257129..257186,257296..257366))
location: region:256509-257366:-1
so has part: feature:257296-257366:-1:exon
so has part: feature:257129-257186:-1:exon
so has part: feature:256509-257052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257296-257366:-1:exon

position:257296:-1
position: 257296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257129-257186:-1:exon

position:257129:-1
position: 257129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257186:-1
position: 257186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256509-257052:-1:exon

position:257052:-1
position: 257052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial
translation: MPLRALLKAAASLRGCATGALPPASLLGKQPVPLYPQQSAAMATLNQMHRQGRPKPPPPKLGATFGRPQIKGVVIKNLIRKPKKPNSANRKCARVRLSNGKEVVAFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLTIIRGKYDCAHVQKKK
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: complement(join(256646..257052,257129..257177))
location: region:256646-257177:-1
so has part: feature:257129-257177:-1:exon
so has part: feature:256646-257052:-1:exon

XP_040434165.1
type: Protein
SIO_000068: ncbiprotein

position:256646:-1
position: 256646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257177:-1
position: 257177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257129-257177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256646-257052:-1:exon

PAK4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 257453..281132
location: region:257453-281132:1
so has part: feature:257453-281132:1:exon
subclass of: SO_0000010

121080319
type: Gene
SIO_000068: ncbigene

position:257453:1
position: 257453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281132:1
position: 281132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257453-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040578223.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(257453..257626,258405..258469,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:257453-281132:1
so has part: feature:257453-257626:1:exon
so has part: feature:258405-258469:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257453-257626:1:exon

position:257626:1
position: 257626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258405-258469:1:exon

position:258405:1
position: 258405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258469:1
position: 258469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275883-276106:1:exon

position:275883:1
position: 275883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276106:1
position: 276106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277709-278398:1:exon

position:277709:1
position: 277709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278398:1
position: 278398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278825-279268:1:exon

position:278825:1
position: 278825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279268:1
position: 279268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279366-279499:1:exon

position:279366:1
position: 279366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279499:1
position: 279499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279594-279720:1:exon

position:279594:1
position: 279594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279720:1
position: 279720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279811-279936:1:exon

position:279811:1
position: 279811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279936:1
position: 279936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280037-280171:1:exon

position:280037:1
position: 280037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280171:1
position: 280171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:280264-281132:1:exon

position:280264:1
position: 280264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040578222.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(257453..257603,258405..258469,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:257453-281132:1
so has part: feature:257453-257603:1:exon
so has part: feature:258405-258469:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257453-257603:1:exon

position:257603:1
position: 257603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258405-258469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280264-281132:1:exon

LOC121080321
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121080321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267908..269346)
location: region:267908-269346:-1
so has part: feature:267908-269346:-1:exon
subclass of: SO_0000011

121080321
type: Gene
SIO_000068: ncbigene

position:267908:-1
position: 267908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269346:-1
position: 269346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267908-269346:-1:exon

LOC121080321
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121080321
product: uncharacterized LOC121080321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005825322.1
SIO_010081: LOC121080321
subclass of: SO_0000673
so part of: LOC121080321
location: complement(join(267908..268031,268163..268374,269266..269346))
location: region:267908-269346:-1
so has part: feature:269266-269346:-1:exon
so has part: feature:268163-268374:-1:exon
so has part: feature:267908-268031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269266-269346:-1:exon

position:269266:-1
position: 269266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268163-268374:-1:exon

position:268163:-1
position: 268163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268374:-1
position: 268374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267908-268031:-1:exon

position:268031:-1
position: 268031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040578221.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(268371..269310,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:268371-281132:1
so has part: feature:268371-269310:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

position:268371:1
position: 268371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268371-269310:1:exon

position:269310:1
position: 269310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040578230.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(268371..269310,275883..276106,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:268371-281132:1
so has part: feature:268371-269310:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268371-269310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MLLPHWFPAQISSIPSCFSQASSLTPPSLAAAVSSPGSSCLRTLPTDYRPGSVGESSTLPGLENGLVAGLTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(269118..269310,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:269118-280419:1
so has part: feature:269118-269310:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434155.1
type: Protein
SIO_000068: ncbiprotein

position:269118:1
position: 269118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280419:1
position: 280419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269118-269310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MLLPHWFPAQISSIPSCFSQASSLTPPSLAAAVSSPGSSCLRTLPTDYRPGSVGESSTLPGLENGLVAGLTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(269118..269310,275883..276106,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:269118-280419:1
so has part: feature:269118-269310:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269118-269310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040578227.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(269984..270163,271633..273501,273619..275364,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:269984-281132:1
so has part: feature:269984-270163:1:exon
so has part: feature:271633-273501:1:exon
so has part: feature:273619-275364:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

position:269984:1
position: 269984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269984-270163:1:exon

position:270163:1
position: 270163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271633-273501:1:exon

position:271633:1
position: 271633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273501:1
position: 273501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273619-275364:1:exon

position:273619:1
position: 273619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275364:1
position: 275364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040578229.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(269984..270163,271986..273501,273619..275364,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:269984-281132:1
so has part: feature:269984-270163:1:exon
so has part: feature:271986-273501:1:exon
so has part: feature:273619-275364:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269984-270163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271986-273501:1:exon

position:271986:1
position: 271986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273619-275364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_040578225.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(269984..270163,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:269984-281132:1
so has part: feature:269984-270163:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269984-270163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040578228.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(270191..273501,273619..275360,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:270191-281132:1
so has part: feature:270191-273501:1:exon
so has part: feature:273619-275360:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

position:270191:1
position: 270191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270191-273501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273619-275360:1:exon

position:275360:1
position: 275360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040578226.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(270191..273501,275883..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..281132)
location: region:270191-281132:1
so has part: feature:270191-273501:1:exon
so has part: feature:275883-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-281132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270191-273501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275883-276106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280264-281132:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434156.1
type: Protein
SIO_000068: ncbiprotein

position:275903:1
position: 275903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHHQQPRGQEPGPKPAPPASGRPPPPEYPKPPAERDGWRDSPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPPGPPRSKNPEPPHPGLTPHASDPHLSRQPPSGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(275903..276106,277709..278398,278825..279268,279366..279499,279594..279720,279811..279936,280037..280171,280264..280419)
location: region:275903-280419:1
so has part: feature:275903-276106:1:exon
so has part: feature:277709-278398:1:exon
so has part: feature:278825-279268:1:exon
so has part: feature:279366-279499:1:exon
so has part: feature:279594-279720:1:exon
so has part: feature:279811-279936:1:exon
so has part: feature:280037-280171:1:exon
so has part: feature:280264-280419:1:exon

XP_040434163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275903-276106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277709-278398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278825-279268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279366-279499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279594-279720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279811-279936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280037-280171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280264-280419:1:exon

SYCN
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(282188..282800)
location: region:282188-282800:-1
so has part: feature:282188-282800:-1:exon
subclass of: SO_0000010

121080333
type: Gene
SIO_000068: ncbigene

position:282188:-1
position: 282188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282800:-1
position: 282800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282188-282800:-1:exon

SYCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SYCN
product: syncollin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040578260.1
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: complement(282188..282800)
location: region:282188-282800:-1
so has part: feature:282188-282800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282188-282800:-1:exon

SYCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncollin
translation: MAALVVAVLAAAVLGGAEAQCPSPSDLRTANGTRICAQLYADNSPYYDQCCAGPVLVVEPGADVPYMPRGWAARVSSLVVGTRCELTVWSRAGKKGKMRRFGAGAVPRLQEVRRGLFGDWDNAIRGYYCSCK
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: complement(282402..282800)
location: region:282402-282800:-1
so has part: feature:282402-282800:-1:exon

XP_040434194.1
type: Protein
SIO_000068: ncbiprotein

position:282402:-1
position: 282402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282402-282800:-1:exon

LRFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LRFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(288620..296187)
location: region:288620-296187:-1
so has part: feature:288620-296187:-1:exon
subclass of: SO_0000010

121080332
type: Gene
SIO_000068: ncbigene

position:288620:-1
position: 288620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296187:-1
position: 296187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288620-296187:-1:exon

LRFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LRFN1
product: leucine rich repeat and fibronectin type III domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040578258.1
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: complement(join(288620..289465,291416..292762,296129..296187))
location: region:288620-296187:-1
so has part: feature:296129-296187:-1:exon
so has part: feature:291416-292762:-1:exon
so has part: feature:288620-289465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296129-296187:-1:exon

position:296129:-1
position: 296129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291416-292762:-1:exon

position:291416:-1
position: 291416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292762:-1
position: 292762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288620-289465:-1:exon

position:289465:-1
position: 289465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LRFN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
translation: MAKLLVPLVMLGAVAGSHRCPPRCLCPAAAPNPTLLCARTGLLAVPPSLDRGAVELRLADNFIGAVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGAQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAGMASLATLTLDHNLLERVPAGAVARLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRRLAQPGRLESCASPPPLAGRLLWAVPEEELACRAPAIAGAAADPAAVLEGQPLRLGCAAAGDPPPALHWLGPDGRLVQNGSRRAVGPDGSLELRVATLGDHGAFTCVASNAAGEAAARVQVAVFPLPVAREDGDGDGETAAGPSDMARAGGNETWVPGERRVVAAELTATSARIRWLPQRHVPGIRMFQVTYNSSLDDSLVYRLLPPSSRSFVLRDLAAGRHYQLCVTALHAEGVPAAPTARGLGCVRFATPGGTPGCSALPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAAAARRPPAAVASVCSQTNGAHRSPEPPPPPPPPPPLPRHPWVLPAGGARGLFPSHSYPRRARTRRHGSLPRLDLPEGTPPLRPSFGSTHWMLESTV
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: complement(join(288892..289465,291416..292740))
location: region:288892-292740:-1
so has part: feature:291416-292740:-1:exon
so has part: feature:288892-289465:-1:exon

XP_040434192.1
type: Protein
SIO_000068: ncbiprotein

position:288892:-1
position: 288892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292740:-1
position: 292740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291416-292740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288892-289465:-1:exon