Falco naumanni isolate bFalNau1 chromosome 18, bFalNau1.pat, whole genome shotgun sequence.
type: Entry
definition: Falco naumanni isolate bFalNau1 chromosome 18, bFalNau1.pat, whole genome shotgun sequence.
sequence version: NC_054071.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_054071.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA719130
dblink: SAMN16870685
keyword: WGS
keyword: RefSeq
source: Falco naumanni (lesser kestrel)
organism: Falco naumanni
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030162.1.\nAssembly name: bFalNau1.pat\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGFVS000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; pbgcpp\n v. 1.9.0; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-14; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bFalNau1.pat\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 104.34x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Falco naumanni Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6763153
topology: linear
so has quality: SO_0000987
location: 1..6763153
location: region:1-6763153:1
RO_0002162: 148594

NC_054071
type: RefSeq
SIO_000068: refseq

PRJNA719130
type: BioProject
SIO_000068: bioproject

SAMN16870685
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6763153:1
position: 6763153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6763153:1:source
so part of: sequence
organism: Falco naumanni
mol type: genomic DNA
isolate: bFalNau1
specimen voucher: P51P2 - H187058 (nest 2016-P51)
chromosome: 18
sex: female
tissue type: blood
dev stage: juvenile
country: Italy: Matera
lat lon: 40.67 N 16.60 E
collection date: 2016-06-25
collected by: Diego Rubolini

148594
type: Taxonomy
SIO_000068: taxonomy

LOC121099031
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28120..32371
location: region:28120-32371:1
so has part: feature:28120-32371:1:exon
subclass of: SO_0000011

121099031
type: Gene
SIO_000068: ncbigene

position:28120:1
position: 28120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32371:1
position: 32371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28120-32371:1:exon

LOC121099031
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121099031
product: uncharacterized LOC121099031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005831397.1
SIO_010081: LOC121099031
subclass of: SO_0000673
so part of: LOC121099031
location: join(28120..28193,28288..28345,32268..32371)
location: region:28120-32371:1
so has part: feature:28120-28193:1:exon
so has part: feature:28288-28345:1:exon
so has part: feature:32268-32371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28120-28193:1:exon

position:28193:1
position: 28193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28288-28345:1:exon

position:28288:1
position: 28288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28345:1
position: 28345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32268-32371:1:exon

position:32268:1
position: 32268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121099191
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099191
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(49842..49926)
location: region:49842-49926:-1
so has part: feature:49842-49926:-1:exon
subclass of: SO_0000578

121099191
type: Gene
SIO_000068: ncbigene

position:49842:-1
position: 49842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49926:-1
position: 49926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49842-49926:-1:exon

LOC121099191
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: snoRNA
gene: LOC121099191
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005831428.1
SIO_010081: LOC121099191
subclass of: SO_0000673
so part of: LOC121099191
location: complement(49842..49926)
location: region:49842-49926:-1
so has part: feature:49842-49926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49842-49926:-1:exon

LOC121098867
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90722..93775)
location: region:90722-93775:-1
so has part: feature:90722-93775:-1:exon
subclass of: SO_0000010

121098867
type: Gene
SIO_000068: ncbigene

position:90722:-1
position: 90722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93775:-1
position: 93775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90722-93775:-1:exon

LOC121098867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098867
product: T-cell activation Rho GTPase-activating protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617341.1
SIO_010081: LOC121098867
subclass of: SO_0000673
so part of: LOC121098867
location: complement(join(90722..90811,91984..92129,92288..92405,92631..92826,93035..93144,93229..93390,93616..93775))
location: region:90722-93775:-1
so has part: feature:93616-93775:-1:exon
so has part: feature:93229-93390:-1:exon
so has part: feature:93035-93144:-1:exon
so has part: feature:92631-92826:-1:exon
so has part: feature:92288-92405:-1:exon
so has part: feature:91984-92129:-1:exon
so has part: feature:90722-90811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93616-93775:-1:exon

position:93616:-1
position: 93616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93229-93390:-1:exon

position:93229:-1
position: 93229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93390:-1
position: 93390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93035-93144:-1:exon

position:93035:-1
position: 93035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93144:-1
position: 93144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92631-92826:-1:exon

position:92631:-1
position: 92631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92826:-1
position: 92826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92288-92405:-1:exon

position:92288:-1
position: 92288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92405:-1
position: 92405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91984-92129:-1:exon

position:91984:-1
position: 91984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92129:-1
position: 92129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90722-90811:-1:exon

position:90811:-1
position: 90811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell activation Rho GTPase-activating protein-like
translation: MGLPWPFALRRTPAAAQAPGQAGSGCSRALFGQPLAALCGEDNTLPRPIQELLAVLHQEGPTTEGIFRRAAGGTELRQLREALDRGTEVDVGSQPALLLAVILKEFLRSIPTKLLVIDLYEDWMAAMERASKQAKVEELKAVADKLPVANLLLLKRLMALLQHIGNNAATSRMSCSNLAICVGPNLLSPPNEDLLPLQAMLAVTEKVNVLVEFLIENCGDILGGEVAGLSPPSAEEVPAPMDRRTELQCEEQSGPAGTAETQRPAKAFLDADASLLDIERGAGGDTGAGPKAAEVLTDFHRLNRCDSWALAAGVDNKRIFSLS
SIO_010081: LOC121098867
subclass of: SO_0000673
so part of: LOC121098867
location: complement(join(90722..90811,91984..92129,92288..92405,92631..92826,93035..93144,93229..93390,93616..93765))
location: region:90722-93765:-1
so has part: feature:93616-93765:-1:exon
so has part: feature:93229-93390:-1:exon
so has part: feature:93035-93144:-1:exon
so has part: feature:92631-92826:-1:exon
so has part: feature:92288-92405:-1:exon
so has part: feature:91984-92129:-1:exon
so has part: feature:90722-90811:-1:exon

XP_040473275.1
type: Protein
SIO_000068: ncbiprotein

position:93765:-1
position: 93765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93616-93765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93229-93390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93035-93144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92631-92826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92288-92405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91984-92129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90722-90811:-1:exon

LOC121099189
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108556..108930)
location: region:108556-108930:-1
so has part: feature:108556-108930:-1:exon
subclass of: SO_0000011

121099189
type: Gene
SIO_000068: ncbigene

position:108556:-1
position: 108556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108930:-1
position: 108930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108556-108930:-1:exon

LOC121099189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121099189
product: uncharacterized LOC121099189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005831427.1
SIO_010081: LOC121099189
subclass of: SO_0000673
so part of: LOC121099189
location: complement(join(108556..108756,108810..108930))
location: region:108556-108930:-1
so has part: feature:108810-108930:-1:exon
so has part: feature:108556-108756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108810-108930:-1:exon

position:108810:-1
position: 108810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108556-108756:-1:exon

position:108756:-1
position: 108756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121099100
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109199..110031
location: region:109199-110031:1
so has part: feature:109199-110031:1:exon
subclass of: SO_0000010

121099100
type: Gene
SIO_000068: ncbigene

position:109199:1
position: 109199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110031:1
position: 110031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109199-110031:1:exon

LOC121099100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121099100
product: MAD2L1-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617748.1
SIO_010081: LOC121099100
subclass of: SO_0000673
so part of: LOC121099100
location: join(109199..109207,109457..110031)
location: region:109199-110031:1
so has part: feature:109199-109207:1:exon
so has part: feature:109457-110031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109199-109207:1:exon

position:109207:1
position: 109207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109457-110031:1:exon

position:109457:1
position: 109457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121099100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121099100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAD2L1-binding protein-like
translation: MEFDGDVIKKPPSMDLASKKCQQVLTELEEMFQHLEIMFSLTLVPRVLILLGGNVMSPKELYELSLEGICEGGAEESLKTASCVRKLFHSLFVADVFSELKALPVMGTVVMLQGHRDCGVDWFRPKLNYKVPTRGRKLAVNLSCDGDINRSASAPQHVTSTWEDYVWFQAPAALKGFHE
SIO_010081: LOC121099100
subclass of: SO_0000673
so part of: LOC121099100
location: join(109199..109207,109457..109987)
location: region:109199-109987:1
so has part: feature:109199-109207:1:exon
so has part: feature:109457-109987:1:exon

XP_040473682.1
type: Protein
SIO_000068: ncbiprotein

position:109987:1
position: 109987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109199-109207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109457-109987:1:exon

LOC121099101
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 116556..121977
location: region:116556-121977:1
so has part: feature:116556-121977:1:exon

121099101
type: Gene
SIO_000068: ncbigene

position:116556:1
position: 116556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121977:1
position: 121977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116556-121977:1:exon

LOC121099101
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: LOC121099101
product: NADH-ubiquinone oxidoreductase chain 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_005831416.1
SIO_010081: LOC121099101
so part of: LOC121099101
location: join(116556..116733,118182..121977)
location: region:116556-121977:1
so has part: feature:116556-116733:1:exon
so has part: feature:118182-121977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116556-116733:1:exon

position:116733:1
position: 116733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118182-121977:1:exon

position:118182:1
position: 118182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139381..174264)
location: region:139381-174264:-1
so has part: feature:139381-174264:-1:exon
subclass of: SO_0000010

121099185
type: Gene
SIO_000068: ncbigene

position:139381:-1
position: 139381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174264:-1
position: 174264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139381-174264:-1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF652
product: zinc finger protein 652, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040617819.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139381..140303,140767..140911,142197..142312,142613..142760,146117..147264,170077..170229,171165..174264))
location: region:139381-174264:-1
so has part: feature:171165-174264:-1:exon
so has part: feature:170077-170229:-1:exon
so has part: feature:146117-147264:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139381-140303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171165-174264:-1:exon

position:171165:-1
position: 171165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170077-170229:-1:exon

position:170077:-1
position: 170077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170229:-1
position: 170229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146117-147264:-1:exon

position:146117:-1
position: 146117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147264:-1
position: 147264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142613-142760:-1:exon

position:142613:-1
position: 142613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142760:-1
position: 142760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142197-142312:-1:exon

position:142197:-1
position: 142197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142312:-1
position: 142312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140767-140911:-1:exon

position:140767:-1
position: 140767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140911:-1
position: 140911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:139381-140303:-1:exon

position:140303:-1
position: 140303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF652
product: zinc finger protein 652, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040617817.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139381..140303,140767..140911,142197..142312,142613..142760,146117..147264,163045..163324))
location: region:139381-163324:-1
so has part: feature:163045-163324:-1:exon
so has part: feature:146117-147264:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139381-140303:-1:exon

position:163324:-1
position: 163324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163045-163324:-1:exon

position:163045:-1
position: 163045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146117-147264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139381-140303:-1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF652
product: zinc finger protein 652, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040617818.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139381..140303,140767..140911,142197..142312,142613..142760,146117..147264,162401..162571,163045..163324))
location: region:139381-163324:-1
so has part: feature:163045-163324:-1:exon
so has part: feature:162401-162571:-1:exon
so has part: feature:146117-147264:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139381-140303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163045-163324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162401-162571:-1:exon

position:162401:-1
position: 162401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162571:-1
position: 162571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146117-147264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139381-140303:-1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF652
product: zinc finger protein 652, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040617820.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139381..140303,140767..140911,142197..142312,142613..142760,146117..147264,160334..160356))
location: region:139381-160356:-1
so has part: feature:160334-160356:-1:exon
so has part: feature:146117-147264:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139381-140303:-1:exon

position:160356:-1
position: 160356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160334-160356:-1:exon

position:160334:-1
position: 160334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146117-147264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139381-140303:-1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTANSCQQLVENCAAHVAGMAQEDSRRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEDSNDDEENERQKKKEKSVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSLEPPKRKKKTAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSTAVQIPLSTTSPATTVPAVVNTPTTPAPPINLNPVSTLPPRPIPHPYSHLHLHPHPHHAHHLPVPPVPHLPPPPALFKSEPLNHRGQGEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139789..140303,140767..140911,142197..142312,142613..142760,146117..147025))
location: region:139789-147025:-1
so has part: feature:146117-147025:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139789-140303:-1:exon

XP_040473751.1
type: Protein
SIO_000068: ncbiprotein

position:139789:-1
position: 139789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147025:-1
position: 147025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146117-147025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139789-140303:-1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTANSCQQLVENCAAHVAGMAQEDSRRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEDSNDDEENERQKKKEKSVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSLEPPKRKKKTAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSTAVQIPLSTTSPATTVPAVVNTPTTPAPPINLNPVSTLPPRPIPHPYSHLHLHPHPHHAHHLPVPPVPHLPPPPALFKSEPLNHRGQGEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139789..140303,140767..140911,142197..142312,142613..142760,146117..147025))
location: region:139789-147025:-1
so has part: feature:146117-147025:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139789-140303:-1:exon

XP_040473752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146117-147025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139789-140303:-1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTANSCQQLVENCAAHVAGMAQEDSRRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEDSNDDEENERQKKKEKSVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSLEPPKRKKKTAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSTAVQIPLSTTSPATTVPAVVNTPTTPAPPINLNPVSTLPPRPIPHPYSHLHLHPHPHHAHHLPVPPVPHLPPPPALFKSEPLNHRGQGEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139789..140303,140767..140911,142197..142312,142613..142760,146117..147025))
location: region:139789-147025:-1
so has part: feature:146117-147025:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139789-140303:-1:exon

XP_040473753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146117-147025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139789-140303:-1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTANSCQQLVENCAAHVAGMAQEDSRRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEDSNDDEENERQKKKEKSVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSLEPPKRKKKTAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSTAVQIPLSTTSPATTVPAVVNTPTTPAPPINLNPVSTLPPRPIPHPYSHLHLHPHPHHAHHLPVPPVPHLPPPPALFKSEPLNHRGQGEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: complement(join(139789..140303,140767..140911,142197..142312,142613..142760,146117..147025))
location: region:139789-147025:-1
so has part: feature:146117-147025:-1:exon
so has part: feature:142613-142760:-1:exon
so has part: feature:142197-142312:-1:exon
so has part: feature:140767-140911:-1:exon
so has part: feature:139789-140303:-1:exon

XP_040473754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146117-147025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142613-142760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142197-142312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140767-140911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139789-140303:-1:exon

LOC121099188
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 163556..165747
location: region:163556-165747:1
so has part: feature:163556-165747:1:exon
subclass of: SO_0000011

121099188
type: Gene
SIO_000068: ncbigene

position:163556:1
position: 163556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165747:1
position: 165747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163556-165747:1:exon

LOC121099188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121099188
product: uncharacterized LOC121099188
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005831426.1
SIO_010081: LOC121099188
subclass of: SO_0000673
so part of: LOC121099188
location: join(163556..163886,165293..165747)
location: region:163556-165747:1
so has part: feature:163556-163886:1:exon
so has part: feature:165293-165747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163556-163886:1:exon

position:163886:1
position: 163886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165293-165747:1:exon

position:165293:1
position: 165293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHB
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(175173..180430)
location: region:175173-180430:-1
so has part: feature:175173-180430:-1:exon
subclass of: SO_0000010

121099187
type: Gene
SIO_000068: ncbigene

position:175173:-1
position: 175173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180430:-1
position: 180430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175173-180430:-1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHB
product: prohibitin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 58 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617821.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: complement(join(175173..175547,176515..176610,177741..177857,178479..178621,179058..179219,179632..179757,180306..180430))
location: region:175173-180430:-1
so has part: feature:180306-180430:-1:exon
so has part: feature:179632-179757:-1:exon
so has part: feature:179058-179219:-1:exon
so has part: feature:178479-178621:-1:exon
so has part: feature:177741-177857:-1:exon
so has part: feature:176515-176610:-1:exon
so has part: feature:175173-175547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180306-180430:-1:exon

position:180306:-1
position: 180306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179632-179757:-1:exon

position:179632:-1
position: 179632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179757:-1
position: 179757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179058-179219:-1:exon

position:179058:-1
position: 179058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179219:-1
position: 179219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178479-178621:-1:exon

position:178479:-1
position: 178479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178621:-1
position: 178621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177741-177857:-1:exon

position:177741:-1
position: 177741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177857:-1
position: 177857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:176515-176610:-1:exon

position:176515:-1
position: 176515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176610:-1
position: 176610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175173-175547:-1:exon

position:175547:-1
position: 175547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHB
product: prohibitin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617822.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: complement(join(175173..175547,176515..176610,177741..177857,178479..178621,179058..179219,179632..179757,180256..180331))
location: region:175173-180331:-1
so has part: feature:180256-180331:-1:exon
so has part: feature:179632-179757:-1:exon
so has part: feature:179058-179219:-1:exon
so has part: feature:178479-178621:-1:exon
so has part: feature:177741-177857:-1:exon
so has part: feature:176515-176610:-1:exon
so has part: feature:175173-175547:-1:exon

position:180331:-1
position: 180331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180256-180331:-1:exon

position:180256:-1
position: 180256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179632-179757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179058-179219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178479-178621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177741-177857:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176515-176610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175173-175547:-1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: complement(join(175335..175547,176515..176610,177741..177857,178479..178621,179058..179219,179632..179719))
location: region:175335-179719:-1
so has part: feature:179632-179719:-1:exon
so has part: feature:179058-179219:-1:exon
so has part: feature:178479-178621:-1:exon
so has part: feature:177741-177857:-1:exon
so has part: feature:176515-176610:-1:exon
so has part: feature:175335-175547:-1:exon

XP_040473755.1
type: Protein
SIO_000068: ncbiprotein

position:175335:-1
position: 175335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179719:-1
position: 179719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179632-179719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179058-179219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178479-178621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177741-177857:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176515-176610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175335-175547:-1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: complement(join(175335..175547,176515..176610,177741..177857,178479..178621,179058..179219,179632..179719))
location: region:175335-179719:-1
so has part: feature:179632-179719:-1:exon
so has part: feature:179058-179219:-1:exon
so has part: feature:178479-178621:-1:exon
so has part: feature:177741-177857:-1:exon
so has part: feature:176515-176610:-1:exon
so has part: feature:175335-175547:-1:exon

XP_040473756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179632-179719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179058-179219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178479-178621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177741-177857:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176515-176610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175335-175547:-1:exon

NGFR
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NGFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204136..218699
location: region:204136-218699:1
so has part: feature:204136-218699:1:exon
subclass of: SO_0000010

121099068
type: Gene
SIO_000068: ncbigene

position:204136:1
position: 204136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218699:1
position: 218699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204136-218699:1:exon

NGFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NGFR
product: nerve growth factor receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040617702.1
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: join(204136..204251,207974..208115,212591..212950,214676..214919,215612..215772,215848..218699)
location: region:204136-218699:1
so has part: feature:204136-204251:1:exon
so has part: feature:207974-208115:1:exon
so has part: feature:212591-212950:1:exon
so has part: feature:214676-214919:1:exon
so has part: feature:215612-215772:1:exon
so has part: feature:215848-218699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204136-204251:1:exon

position:204251:1
position: 204251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207974-208115:1:exon

position:207974:1
position: 207974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208115:1
position: 208115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212591-212950:1:exon

position:212591:1
position: 212591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212950:1
position: 212950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214676-214919:1:exon

position:214676:1
position: 214676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214919:1
position: 214919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215612-215772:1:exon

position:215612:1
position: 215612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215772:1
position: 215772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215848-218699:1:exon

position:215848:1
position: 215848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NGFR
product: nerve growth factor receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617703.1
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: join(204136..204251,207974..208115,212591..212610,212800..212950,214676..214919,215612..215772,215848..218699)
location: region:204136-218699:1
so has part: feature:204136-204251:1:exon
so has part: feature:207974-208115:1:exon
so has part: feature:212591-212610:1:exon
so has part: feature:212800-212950:1:exon
so has part: feature:214676-214919:1:exon
so has part: feature:215612-215772:1:exon
so has part: feature:215848-218699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204136-204251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207974-208115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212591-212610:1:exon

position:212610:1
position: 212610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:212800-212950:1:exon

position:212800:1
position: 212800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214676-214919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215612-215772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215848-218699:1:exon

NGFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NGFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 16 isoform X1
translation: MAGLLPLLLLLAGSAWGSKDKCFTKMYTTSGECCKACNLGEGVVQPCGVNQTICEPCLDSVTYSDTVSATEPCKPCTQCVGLQSMSAPCVESDDAVCRCAYGYYQDEQSGSCKECRVCEVGFGLMFPCQDSQDTVCEECPEGTFSSEANFVDPCLPCTTCEENEVMVKECTATSDAECRDLHPRWTTHTPSLVGSESPEAITRDHFNTEVMPSTPADTATTIIGSSQPVVSRGTADNLIPVYCSILAAVVVGLVAYIAFKRWNNCKQNKQGANNRPVNQTPSPEGEKLHSDSGISVDSQSLHDQQPPSQSTQGPAPKGDGNLYTNLPPSKQEEVEKLLGSSTEETWRRLAGELGYKEDLIDSFTREESPAQALLADWSSKETATLDALLAALRKIQRGDIAESLYSESTATSPV
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: join(204216..204251,207974..208115,212591..212950,214676..214919,215612..215772,215848..216149)
location: region:204216-216149:1
so has part: feature:204216-204251:1:exon
so has part: feature:207974-208115:1:exon
so has part: feature:212591-212950:1:exon
so has part: feature:214676-214919:1:exon
so has part: feature:215612-215772:1:exon
so has part: feature:215848-216149:1:exon

XP_040473636.1
type: Protein
SIO_000068: ncbiprotein

position:204216:1
position: 204216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216149:1
position: 216149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204216-204251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207974-208115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212591-212950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214676-214919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215612-215772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215848-216149:1:exon

NGFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NGFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 16 isoform X2
translation: MAGLLPLLLLLAGSAWGSKDKCFTKMYTTSGECCKACNLGEGVVQPCGVNQTICEPCLDSVTYSDTDSQDTVCEECPEGTFSSEANFVDPCLPCTTCEENEVMVKECTATSDAECRDLHPRWTTHTPSLVGSESPEAITRDHFNTEVMPSTPADTATTIIGSSQPVVSRGTADNLIPVYCSILAAVVVGLVAYIAFKRWNNCKQNKQGANNRPVNQTPSPEGEKLHSDSGISVDSQSLHDQQPPSQSTQGPAPKGDGNLYTNLPPSKQEEVEKLLGSSTEETWRRLAGELGYKEDLIDSFTREESPAQALLADWSSKETATLDALLAALRKIQRGDIAESLYSESTATSPV
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: join(204216..204251,207974..208115,212591..212610,212800..212950,214676..214919,215612..215772,215848..216149)
location: region:204216-216149:1
so has part: feature:204216-204251:1:exon
so has part: feature:207974-208115:1:exon
so has part: feature:212591-212610:1:exon
so has part: feature:212800-212950:1:exon
so has part: feature:214676-214919:1:exon
so has part: feature:215612-215772:1:exon
so has part: feature:215848-216149:1:exon

XP_040473637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204216-204251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207974-208115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212591-212610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212800-212950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214676-214919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215612-215772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215848-216149:1:exon

NXPH3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255445..257572
location: region:255445-257572:1
so has part: feature:255445-257572:1:exon
subclass of: SO_0000010

121099026
type: Gene
SIO_000068: ncbigene

position:255445:1
position: 255445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257572:1
position: 257572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255445-257572:1:exon

NXPH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NXPH3
product: neurexophilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617641.1
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: join(255445..255647,256844..257572)
location: region:255445-257572:1
so has part: feature:255445-255647:1:exon
so has part: feature:256844-257572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255445-255647:1:exon

position:255647:1
position: 255647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256844-257572:1:exon

position:256844:1
position: 256844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NXPH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-3
translation: MHLPQSCIVLFIQGSISLLVIRGQEPGKGAEQHESNTQESAQVQKARGLLSSKSLLTPTLLQNMTLLELVSSSRELWDILDNLSERNHAPHPRGQRDLGPASGKLKKIFGWGDFYSNIKTVKLNLLITGKVVDHGNGTVNVFFRHNSTGQGNISVSLVPPTKAVEFDLEQQIFIEAKESKIFNCRVEYEKVDRAKKTTLCTYDPSKTCYHEHTQSHVSWVCSKPFKVICIYITFYSIDYRLVQKVCPDYNYHSDVPYYPSG
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: join(255591..255647,256844..257572)
location: region:255591-257572:1
so has part: feature:255591-255647:1:exon
so has part: feature:256844-257572:1:exon

XP_040473575.1
type: Protein
SIO_000068: ncbiprotein

position:255591:1
position: 255591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255591-255647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256844-257572:1:exon

LOC121098837
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(273713..302247)
location: region:273713-302247:-1
so has part: feature:273713-302247:-1:exon
subclass of: SO_0000010

121098837
type: Gene
SIO_000068: ncbigene

position:273713:-1
position: 273713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302247:-1
position: 302247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273713-302247:-1:exon

LOC121098837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098837
product: speckle type BTB/POZ protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040617259.1
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(273713..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286776,298695..298766,301247..301441,302135..302247))
location: region:273713-302247:-1
so has part: feature:302135-302247:-1:exon
so has part: feature:301247-301441:-1:exon
so has part: feature:298695-298766:-1:exon
so has part: feature:286638-286776:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:273713-274948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302135-302247:-1:exon

position:302135:-1
position: 302135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301247-301441:-1:exon

position:301247:-1
position: 301247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301441:-1
position: 301441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298695-298766:-1:exon

position:298695:-1
position: 298695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298766:-1
position: 298766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286638-286776:-1:exon

position:286638:-1
position: 286638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286776:-1
position: 286776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:286146-286267:-1:exon

position:286146:-1
position: 286146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286267:-1
position: 286267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284342-284493:-1:exon

position:284342:-1
position: 284342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284493:-1
position: 284493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284098-284225:-1:exon

position:284098:-1
position: 284098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284225:-1
position: 284225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280281-280458:-1:exon

position:280281:-1
position: 280281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280458:-1
position: 280458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:279649-279704:-1:exon

position:279649:-1
position: 279649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279704:-1
position: 279704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:279070-279192:-1:exon

position:279070:-1
position: 279070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279192:-1
position: 279192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:275332-275474:-1:exon

position:275332:-1
position: 275332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275474:-1
position: 275474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:273713-274948:-1:exon

position:274948:-1
position: 274948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098837
product: speckle type BTB/POZ protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_040617260.1
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(273713..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286776,302135..302155))
location: region:273713-302155:-1
so has part: feature:302135-302155:-1:exon
so has part: feature:286638-286776:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:273713-274948:-1:exon

position:302155:-1
position: 302155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302135-302155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286638-286776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273713-274948:-1:exon

LOC121098837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098837
product: speckle type BTB/POZ protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040617257.1
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(273713..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286776,301247..301578))
location: region:273713-301578:-1
so has part: feature:301247-301578:-1:exon
so has part: feature:286638-286776:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:273713-274948:-1:exon

position:301578:-1
position: 301578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301247-301578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286638-286776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273713-274948:-1:exon

LOC121098837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098837
product: speckle type BTB/POZ protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040617256.1
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(273713..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286776,298695..298766,301247..301578))
location: region:273713-301578:-1
so has part: feature:301247-301578:-1:exon
so has part: feature:298695-298766:-1:exon
so has part: feature:286638-286776:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:273713-274948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301247-301578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298695-298766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286638-286776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273713-274948:-1:exon

LOC121098837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098837
product: speckle type BTB/POZ protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040617258.1
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(273713..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286776,295368..295452,298695..298766,301247..301578))
location: region:273713-301578:-1
so has part: feature:301247-301578:-1:exon
so has part: feature:298695-298766:-1:exon
so has part: feature:295368-295452:-1:exon
so has part: feature:286638-286776:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:273713-274948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301247-301578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298695-298766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295368-295452:-1:exon

position:295368:-1
position: 295368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295452:-1
position: 295452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286638-286776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273713-274948:-1:exon

LOC121098837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(274804..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286715))
location: region:274804-286715:-1
so has part: feature:286638-286715:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:274804-274948:-1:exon

XP_040473190.1
type: Protein
SIO_000068: ncbiprotein

position:274804:-1
position: 274804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286715:-1
position: 286715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286638-286715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274804-274948:-1:exon

LOC121098837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(274804..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286715))
location: region:274804-286715:-1
so has part: feature:286638-286715:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:274804-274948:-1:exon

XP_040473191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286638-286715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274804-274948:-1:exon

LOC121098837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(274804..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286715))
location: region:274804-286715:-1
so has part: feature:286638-286715:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:274804-274948:-1:exon

XP_040473192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286638-286715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274804-274948:-1:exon

LOC121098837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(274804..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286715))
location: region:274804-286715:-1
so has part: feature:286638-286715:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:274804-274948:-1:exon

XP_040473193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286638-286715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274804-274948:-1:exon

LOC121098837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC121098837
subclass of: SO_0000673
so part of: LOC121098837
location: complement(join(274804..274948,275332..275474,279070..279192,279649..279704,280281..280458,284098..284225,284342..284493,286146..286267,286638..286715))
location: region:274804-286715:-1
so has part: feature:286638-286715:-1:exon
so has part: feature:286146-286267:-1:exon
so has part: feature:284342-284493:-1:exon
so has part: feature:284098-284225:-1:exon
so has part: feature:280281-280458:-1:exon
so has part: feature:279649-279704:-1:exon
so has part: feature:279070-279192:-1:exon
so has part: feature:275332-275474:-1:exon
so has part: feature:274804-274948:-1:exon

XP_040473194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286638-286715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286146-286267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284342-284493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284098-284225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280281-280458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279649-279704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279070-279192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275332-275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274804-274948:-1:exon

LOC121098892
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(308350..313867)
location: region:308350-313867:-1
so has part: feature:308350-313867:-1:exon
subclass of: SO_0000011

121098892
type: Gene
SIO_000068: ncbigene

position:308350:-1
position: 308350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313867:-1
position: 313867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308350-313867:-1:exon

LOC121098892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098892
product: uncharacterized LOC121098892
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005831366.1
SIO_010081: LOC121098892
subclass of: SO_0000673
so part of: LOC121098892
location: complement(join(308350..313391,313525..313867))
location: region:308350-313867:-1
so has part: feature:313525-313867:-1:exon
so has part: feature:308350-313391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313525-313867:-1:exon

position:313525:-1
position: 313525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308350-313391:-1:exon

position:313391:-1
position: 313391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35B1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314492..318946)
location: region:314492-318946:-1
so has part: feature:314492-318946:-1:exon
subclass of: SO_0000010

121098891
type: Gene
SIO_000068: ncbigene

position:314492:-1
position: 314492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318946:-1
position: 318946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314492-318946:-1:exon

SLC35B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC35B1
product: solute carrier family 35 member B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_040617385.1
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: complement(join(314492..314997,315355..315508,315788..315894,316635..316761,317101..317258,317469..317499,318050..318180,318423..318526,318731..318946))
location: region:314492-318946:-1
so has part: feature:318731-318946:-1:exon
so has part: feature:318423-318526:-1:exon
so has part: feature:318050-318180:-1:exon
so has part: feature:317469-317499:-1:exon
so has part: feature:317101-317258:-1:exon
so has part: feature:316635-316761:-1:exon
so has part: feature:315788-315894:-1:exon
so has part: feature:315355-315508:-1:exon
so has part: feature:314492-314997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318731-318946:-1:exon

position:318731:-1
position: 318731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318423-318526:-1:exon

position:318423:-1
position: 318423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318526:-1
position: 318526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318050-318180:-1:exon

position:318050:-1
position: 318050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318180:-1
position: 318180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317469-317499:-1:exon

position:317469:-1
position: 317469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317499:-1
position: 317499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317101-317258:-1:exon

position:317101:-1
position: 317101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317258:-1
position: 317258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316635-316761:-1:exon

position:316635:-1
position: 316635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316761:-1
position: 316761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315788-315894:-1:exon

position:315788:-1
position: 315788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315894:-1
position: 315894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:315355-315508:-1:exon

position:315355:-1
position: 315355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315508:-1
position: 315508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314492-314997:-1:exon

position:314997:-1
position: 314997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member B1
translation: MRQPAPPPAALRDVVLDVAPVLSGRAAAMGASANGTALPERLRLPVCFLGVFACYFYYGILQESITRGRYGEGAKQEKFKYALTLVFIQCVINAAFAKLLIRFFDAVKADRTRSWLYATCSLSYLGAMVSSNSALQFVSYPTQVLGKSCKPIPVMLLGVTLLRKKYPPAKYLCVLLIVAGVALFMYKPKKGAGSDDHVFGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLFLGAGILFTGELWEFLSFTERYPSIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVVLFANPISTMQWVGTVLVFLGLGLDAKFGKGVKKTSH
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: complement(join(314945..314997,315355..315508,315788..315894,316635..316761,317101..317258,317469..317499,318050..318180,318423..318526,318731..318924))
location: region:314945-318924:-1
so has part: feature:318731-318924:-1:exon
so has part: feature:318423-318526:-1:exon
so has part: feature:318050-318180:-1:exon
so has part: feature:317469-317499:-1:exon
so has part: feature:317101-317258:-1:exon
so has part: feature:316635-316761:-1:exon
so has part: feature:315788-315894:-1:exon
so has part: feature:315355-315508:-1:exon
so has part: feature:314945-314997:-1:exon

XP_040473319.1
type: Protein
SIO_000068: ncbiprotein

position:314945:-1
position: 314945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318924:-1
position: 318924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318731-318924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318423-318526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318050-318180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317469-317499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317101-317258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316635-316761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315788-315894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315355-315508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314945-314997:-1:exon

FAM117A
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(319699..351903)
location: region:319699-351903:-1
so has part: feature:319699-351903:-1:exon
subclass of: SO_0000010

121099004
type: Gene
SIO_000068: ncbigene

position:319699:-1
position: 319699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351903:-1
position: 351903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319699-351903:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040617590.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,348271..348425,350959..351066,351793..351903))
location: region:319699-351903:-1
so has part: feature:351793-351903:-1:exon
so has part: feature:350959-351066:-1:exon
so has part: feature:348271-348425:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351793-351903:-1:exon

position:351793:-1
position: 351793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350959-351066:-1:exon

position:350959:-1
position: 350959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351066:-1
position: 351066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348271-348425:-1:exon

position:348271:-1
position: 348271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348425:-1
position: 348425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328200-328366:-1:exon

position:328200:-1
position: 328200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328366:-1
position: 328366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324605-324721:-1:exon

position:324605:-1
position: 324605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324721:-1
position: 324721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323960-324073:-1:exon

position:323960:-1
position: 323960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324073:-1
position: 324073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:323483-323617:-1:exon

position:323483:-1
position: 323483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323617:-1
position: 323617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:322741-322963:-1:exon

position:322741:-1
position: 322741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322963:-1
position: 322963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:322244-322364:-1:exon

position:322244:-1
position: 322244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322364:-1
position: 322364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:319699-321286:-1:exon

position:321286:-1
position: 321286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040617589.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,344744..344837,348271..348425,350959..351066,351793..351903))
location: region:319699-351903:-1
so has part: feature:351793-351903:-1:exon
so has part: feature:350959-351066:-1:exon
so has part: feature:348271-348425:-1:exon
so has part: feature:344744-344837:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351793-351903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350959-351066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348271-348425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344744-344837:-1:exon

position:344744:-1
position: 344744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344837:-1
position: 344837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040617588.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,344744..344840,348271..348425,350959..351066,351793..351903))
location: region:319699-351903:-1
so has part: feature:351793-351903:-1:exon
so has part: feature:350959-351066:-1:exon
so has part: feature:348271-348425:-1:exon
so has part: feature:344744-344840:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351793-351903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350959-351066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348271-348425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344744-344840:-1:exon

position:344840:-1
position: 344840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040617587.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,332240..332368,344744..344840,348271..348425,350959..351066,351793..351903))
location: region:319699-351903:-1
so has part: feature:351793-351903:-1:exon
so has part: feature:350959-351066:-1:exon
so has part: feature:348271-348425:-1:exon
so has part: feature:344744-344840:-1:exon
so has part: feature:332240-332368:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351793-351903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350959-351066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348271-348425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344744-344840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332240-332368:-1:exon

position:332240:-1
position: 332240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332368:-1
position: 332368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040617585.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324700,328200..328366,340533..340663))
location: region:319699-340663:-1
so has part: feature:340533-340663:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324700:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

position:340663:-1
position: 340663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340533-340663:-1:exon

position:340533:-1
position: 340533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324605-324700:-1:exon

position:324700:-1
position: 324700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040617591.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,332240..332368,340533..340636))
location: region:319699-340636:-1
so has part: feature:340533-340636:-1:exon
so has part: feature:332240-332368:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

position:340636:-1
position: 340636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340533-340636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332240-332368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: FAM117A
product: family with sequence similarity 117 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617586.1
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(319699..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,329942..330191))
location: region:319699-330191:-1
so has part: feature:329942-330191:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:319699-321286:-1:exon

position:330191:-1
position: 330191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329942-330191:-1:exon

position:329942:-1
position: 329942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319699-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X1
translation: MAGAPYCRGGVGGLQPLRATVPFQLQQRRGDGGRAASVPCAAAVEKTCRPRQPRVRRTSSLDTIVGSYLLGQWPRDTEGASTLCMNDKATQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324700,328200..328366,340533..340638))
location: region:320947-340638:-1
so has part: feature:340533-340638:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324700:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473519.1
type: Protein
SIO_000068: ncbiprotein

position:320947:-1
position: 320947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340638:-1
position: 340638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340533-340638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324605-324700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X2
translation: MSTEEEAATSVPCAAAVEKTCRPRQPRVRRTSSLDTIVGSYLLGQWPRDTEGASTLCMNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328366,329942..329966))
location: region:320947-329966:-1
so has part: feature:329942-329966:-1:exon
so has part: feature:328200-328366:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473520.1
type: Protein
SIO_000068: ncbiprotein

position:329966:-1
position: 329966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329942-329966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328200-328366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X3
translation: MNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328220))
location: region:320947-328220:-1
so has part: feature:328200-328220:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473521.1
type: Protein
SIO_000068: ncbiprotein

position:328220:-1
position: 328220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328200-328220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X3
translation: MNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328220))
location: region:320947-328220:-1
so has part: feature:328200-328220:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328200-328220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X3
translation: MNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328220))
location: region:320947-328220:-1
so has part: feature:328200-328220:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328200-328220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X3
translation: MNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328220))
location: region:320947-328220:-1
so has part: feature:328200-328220:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328200-328220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320947-321286:-1:exon

FAM117A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: FAM117A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM117A isoform X3
translation: MNDKATQPCFSSLQTPVSWHDAEVGKASCSAHKRSASWGSADHRREIAKLKQQLQRTKLNGRSGKEKEKSSPLQGDHAVFGSLRDTPSGFLSSCPILRFSPCLHRSLEGLNQELEEAFVKEQGDEELLRILDVPDGHRAPAPAQRGSQDASLTLEPGSDSCSSLSLSPSPSVPLRLSPHTPVRLAVGELSSAADEVQPDPKEKEEGSPSPVLAFAASPRPNHSYMFKREPPEGCEKVRAFEEASSPSPDQPFQPSCPDKNKVHFNPTGSAFCPVSLVKPLFPNVGFLFRGFPASSSPGTGTFTSCQATAPTPFLGVRKDAAVEGFSEVSQPPSLNYDHWKHGQAEESVVFHSSLVV
SIO_010081: FAM117A
subclass of: SO_0000673
so part of: FAM117A
location: complement(join(320947..321286,322244..322364,322741..322963,323483..323617,323960..324073,324605..324721,328200..328220))
location: region:320947-328220:-1
so has part: feature:328200-328220:-1:exon
so has part: feature:324605-324721:-1:exon
so has part: feature:323960-324073:-1:exon
so has part: feature:323483-323617:-1:exon
so has part: feature:322741-322963:-1:exon
so has part: feature:322244-322364:-1:exon
so has part: feature:320947-321286:-1:exon

XP_040473525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328200-328220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324605-324721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323960-324073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323483-323617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322741-322963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322244-322364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320947-321286:-1:exon

KAT7
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 352120..365826
location: region:352120-365826:1
so has part: feature:352120-365826:1:exon
subclass of: SO_0000010

121099003
type: Gene
SIO_000068: ncbigene

position:352120:1
position: 352120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365826:1
position: 365826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352120-365826:1:exon

KAT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KAT7
product: lysine acetyltransferase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040617584.1
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(352120..352336,353836..353983,355270..355446,355638..355877,356447..356529,356771..356860,357575..357673,357843..357953,358812..359003,359206..359295,360214..360354,362103..362196,362371..362517,363224..363330,364009..365826)
location: region:352120-365826:1
so has part: feature:352120-352336:1:exon
so has part: feature:353836-353983:1:exon
so has part: feature:355270-355446:1:exon
so has part: feature:355638-355877:1:exon
so has part: feature:356447-356529:1:exon
so has part: feature:356771-356860:1:exon
so has part: feature:357575-357673:1:exon
so has part: feature:357843-357953:1:exon
so has part: feature:358812-359003:1:exon
so has part: feature:359206-359295:1:exon
so has part: feature:360214-360354:1:exon
so has part: feature:362103-362196:1:exon
so has part: feature:362371-362517:1:exon
so has part: feature:363224-363330:1:exon
so has part: feature:364009-365826:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352120-352336:1:exon

position:352336:1
position: 352336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353836-353983:1:exon

position:353836:1
position: 353836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353983:1
position: 353983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355270-355446:1:exon

position:355270:1
position: 355270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355446:1
position: 355446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355638-355877:1:exon

position:355638:1
position: 355638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355877:1
position: 355877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356447-356529:1:exon

position:356447:1
position: 356447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356529:1
position: 356529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:356771-356860:1:exon

position:356771:1
position: 356771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356860:1
position: 356860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357575-357673:1:exon

position:357575:1
position: 357575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357673:1
position: 357673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357843-357953:1:exon

position:357843:1
position: 357843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357953:1
position: 357953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:358812-359003:1:exon

position:358812:1
position: 358812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359003:1
position: 359003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:359206-359295:1:exon

position:359206:1
position: 359206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359295:1
position: 359295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:360214-360354:1:exon

position:360214:1
position: 360214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360354:1
position: 360354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:362103-362196:1:exon

position:362103:1
position: 362103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362196:1
position: 362196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:362371-362517:1:exon

position:362371:1
position: 362371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362517:1
position: 362517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:363224-363330:1:exon

position:363224:1
position: 363224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363330:1
position: 363330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:364009-365826:1:exon

position:364009:1
position: 364009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT7 isoform X2
translation: MPRRKRNAGSSSDGTEDSDFSTDPEHTDSSESDGTSRRSARVTRSSARLSQSSQDSSPVRNPPSFGAEEPVYSTRRVTRSQQQPTPVTPKKYPLRQTRSSGSETEQVVDFSDRDTKNAADHDESPPRTPTGNAPSSESDIDISSPNVSHDESIAKDMSMKDSGSDLSHRPKRRRFHESYNFNMKCPTPGCNSLGHLTGKHERHFSISGCPLYHNLSADECKVRAQSRDKQIEERMLAHRQDDNNRHATRHQAPTERQLRYKEKVAELRKKRNSGLSKEQKEKYMEHRQTYGNTREPLLENLTSEYDLELFRRAQARASEDLEKLRLQGQITEGSNMIKTIAFGRYELDTWYHSPYPEEYARLGRLYMCEFCLKYMKSQTILRRHMAKCVWKHPPGDEIYRKGSISVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTEADNTGCHLIGYFSKEKNSFLNYNVSCILTMPQYMRQGYGKMLIDFSYLLSKVEEKVGSPERPLSDLGLISYRSYWKEVLLRYLHNFQGKEISIKEISQETAVNPVDIVSTLQALQMLKYWKGKHLVLKRQDLIDEWIAKEAKRSNSNKIMDPSCLKWTPPKGT
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(352322..352336,353836..353983,355270..355446,355638..355877,356447..356529,356771..356860,357575..357673,357843..357953,358812..359003,359206..359295,360214..360354,362103..362196,362371..362517,363224..363330,364009..364110)
location: region:352322-364110:1
so has part: feature:352322-352336:1:exon
so has part: feature:353836-353983:1:exon
so has part: feature:355270-355446:1:exon
so has part: feature:355638-355877:1:exon
so has part: feature:356447-356529:1:exon
so has part: feature:356771-356860:1:exon
so has part: feature:357575-357673:1:exon
so has part: feature:357843-357953:1:exon
so has part: feature:358812-359003:1:exon
so has part: feature:359206-359295:1:exon
so has part: feature:360214-360354:1:exon
so has part: feature:362103-362196:1:exon
so has part: feature:362371-362517:1:exon
so has part: feature:363224-363330:1:exon
so has part: feature:364009-364110:1:exon

XP_040473518.1
type: Protein
SIO_000068: ncbiprotein

position:352322:1
position: 352322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364110:1
position: 364110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352322-352336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353836-353983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355270-355446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355638-355877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356447-356529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356771-356860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357575-357673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357843-357953:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358812-359003:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359206-359295:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360214-360354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362103-362196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362371-362517:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:363224-363330:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:364009-364110:1:exon

KAT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KAT7
product: lysine acetyltransferase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_040617583.1
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(353797..353983,355270..355446,355638..355877,356447..356529,356771..356860,357575..357673,357843..357953,358812..359003,359206..359295,360214..360354,362103..362196,362371..362517,363224..363330,364009..365826)
location: region:353797-365826:1
so has part: feature:353797-353983:1:exon
so has part: feature:355270-355446:1:exon
so has part: feature:355638-355877:1:exon
so has part: feature:356447-356529:1:exon
so has part: feature:356771-356860:1:exon
so has part: feature:357575-357673:1:exon
so has part: feature:357843-357953:1:exon
so has part: feature:358812-359003:1:exon
so has part: feature:359206-359295:1:exon
so has part: feature:360214-360354:1:exon
so has part: feature:362103-362196:1:exon
so has part: feature:362371-362517:1:exon
so has part: feature:363224-363330:1:exon
so has part: feature:364009-365826:1:exon

position:353797:1
position: 353797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353797-353983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355270-355446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355638-355877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356447-356529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356771-356860:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357575-357673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357843-357953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358812-359003:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359206-359295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360214-360354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362103-362196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362371-362517:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:363224-363330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:364009-365826:1:exon

KAT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT7 isoform X1
translation: MSGSVVSQRNAGSSSDGTEDSDFSTDPEHTDSSESDGTSRRSARVTRSSARLSQSSQDSSPVRNPPSFGAEEPVYSTRRVTRSQQQPTPVTPKKYPLRQTRSSGSETEQVVDFSDRDTKNAADHDESPPRTPTGNAPSSESDIDISSPNVSHDESIAKDMSMKDSGSDLSHRPKRRRFHESYNFNMKCPTPGCNSLGHLTGKHERHFSISGCPLYHNLSADECKVRAQSRDKQIEERMLAHRQDDNNRHATRHQAPTERQLRYKEKVAELRKKRNSGLSKEQKEKYMEHRQTYGNTREPLLENLTSEYDLELFRRAQARASEDLEKLRLQGQITEGSNMIKTIAFGRYELDTWYHSPYPEEYARLGRLYMCEFCLKYMKSQTILRRHMAKCVWKHPPGDEIYRKGSISVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTEADNTGCHLIGYFSKEKNSFLNYNVSCILTMPQYMRQGYGKMLIDFSYLLSKVEEKVGSPERPLSDLGLISYRSYWKEVLLRYLHNFQGKEISIKEISQETAVNPVDIVSTLQALQMLKYWKGKHLVLKRQDLIDEWIAKEAKRSNSNKIMDPSCLKWTPPKGT
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: join(353812..353983,355270..355446,355638..355877,356447..356529,356771..356860,357575..357673,357843..357953,358812..359003,359206..359295,360214..360354,362103..362196,362371..362517,363224..363330,364009..364110)
location: region:353812-364110:1
so has part: feature:353812-353983:1:exon
so has part: feature:355270-355446:1:exon
so has part: feature:355638-355877:1:exon
so has part: feature:356447-356529:1:exon
so has part: feature:356771-356860:1:exon
so has part: feature:357575-357673:1:exon
so has part: feature:357843-357953:1:exon
so has part: feature:358812-359003:1:exon
so has part: feature:359206-359295:1:exon
so has part: feature:360214-360354:1:exon
so has part: feature:362103-362196:1:exon
so has part: feature:362371-362517:1:exon
so has part: feature:363224-363330:1:exon
so has part: feature:364009-364110:1:exon

XP_040473517.1
type: Protein
SIO_000068: ncbiprotein

position:353812:1
position: 353812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353812-353983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355270-355446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355638-355877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356447-356529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356771-356860:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357575-357673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357843-357953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358812-359003:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359206-359295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360214-360354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362103-362196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362371-362517:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:363224-363330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:364009-364110:1:exon

DLX4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: DLX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 476754..479784
location: region:476754-479784:1
so has part: feature:476754-479784:1:exon
subclass of: SO_0000010

121098766
type: Gene
SIO_000068: ncbigene

position:476754:1
position: 476754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479784:1
position: 479784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476754-479784:1:exon

DLX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DLX4
product: distal-less homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins
transcript id: XM_040617083.1
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: join(476754..477045,478428..478621,479491..479784)
location: region:476754-479784:1
so has part: feature:476754-477045:1:exon
so has part: feature:478428-478621:1:exon
so has part: feature:479491-479784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476754-477045:1:exon

position:477045:1
position: 477045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478428-478621:1:exon

position:478428:1
position: 478428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478621:1
position: 478621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479491-479784:1:exon

position:479491:1
position: 479491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DLX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-4
translation: MTMSSVAESLLGPDPSKAAFLELSHPSPPHYPLHGLHPASHPQHDPPPFASYGRPGPYPYTSGAPPPPHGGPYLPYPPPGAQHPPAGLAHGARLQDAEHEKPLAIANGELRINSKGKKLRKPRTIYSSLQLQALNQRFQQTQYLALPERAELAAQLGLTQTQVKIWFQNKRSKYKKIMKQGSSVPDGEHLHTATSLSPRSPSIPPLWDIPVPGKGPPLASSSYINSFGAWYQPHPQDAIPRAPMM
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: join(476754..477045,478428..478621,479491..479742)
location: region:476754-479742:1
so has part: feature:476754-477045:1:exon
so has part: feature:478428-478621:1:exon
so has part: feature:479491-479742:1:exon

XP_040473017.1
type: Protein
SIO_000068: ncbiprotein

position:479742:1
position: 479742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476754-477045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478428-478621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479491-479742:1:exon

DLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: DLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(485412..489437)
location: region:485412-489437:-1
so has part: feature:485412-489437:-1:exon
subclass of: SO_0000010

121098951
type: Gene
SIO_000068: ncbigene

position:485412:-1
position: 485412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489437:-1
position: 489437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485412-489437:-1:exon

DLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DLX3
product: distal-less homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617486.1
SIO_010081: DLX3
subclass of: SO_0000673
so part of: DLX3
location: complement(join(485412..486919,488474..488664,489038..489437))
location: region:485412-489437:-1
so has part: feature:489038-489437:-1:exon
so has part: feature:488474-488664:-1:exon
so has part: feature:485412-486919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489038-489437:-1:exon

position:489038:-1
position: 489038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488474-488664:-1:exon

position:488474:-1
position: 488474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488664:-1
position: 488664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485412-486919:-1:exon

position:486919:-1
position: 486919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein DLX-3
translation: MSGSFDKKLSSILTDLSGSLSCHAASKDSPTLPESSVTDLGYYTSQHDYYPGQSYSQPVSHYPYHQFNLNGIGAAGTYSPKSDYSYSPSYRQYSHYRDQQLPAQEAVSVKEEPEPEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPAVWDSNSHGSTPGRTPLPQPLPYSSSPGFLEEHNPWYHPQTLSGPHGPHQPPPATTMHHTSPGPPPSTGAVY
SIO_010081: DLX3
subclass of: SO_0000673
so part of: DLX3
location: complement(join(486578..486919,488474..488664,489038..489356))
location: region:486578-489356:-1
so has part: feature:489038-489356:-1:exon
so has part: feature:488474-488664:-1:exon
so has part: feature:486578-486919:-1:exon

XP_040473420.1
type: Protein
SIO_000068: ncbiprotein

position:486578:-1
position: 486578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489356:-1
position: 489356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489038-489356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488474-488664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486578-486919:-1:exon

ITGA3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ITGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 493416..509464
location: region:493416-509464:1
so has part: feature:493416-509464:1:exon
subclass of: SO_0000010

121099043
type: Gene
SIO_000068: ncbigene

position:493416:1
position: 493416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509464:1
position: 509464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493416-509464:1:exon

ITGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ITGA3
product: integrin subunit alpha 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617664.1
SIO_010081: ITGA3
subclass of: SO_0000673
so part of: ITGA3
location: join(493416..493722,499882..500003,500108..500190,500642..500891,501941..502024,502301..502508,502764..502957,503203..503291,503444..503580,503778..503864,503948..504015,504252..504388,504715..504861,504960..505057,505232..505397,505490..505558,505646..505725,505971..506048,506238..506340,506411..506581,506698..506811,506952..507065,507260..507358,507445..507570,508522..509464)
location: region:493416-509464:1
so has part: feature:493416-493722:1:exon
so has part: feature:499882-500003:1:exon
so has part: feature:500108-500190:1:exon
so has part: feature:500642-500891:1:exon
so has part: feature:501941-502024:1:exon
so has part: feature:502301-502508:1:exon
so has part: feature:502764-502957:1:exon
so has part: feature:503203-503291:1:exon
so has part: feature:503444-503580:1:exon
so has part: feature:503778-503864:1:exon
so has part: feature:503948-504015:1:exon
so has part: feature:504252-504388:1:exon
so has part: feature:504715-504861:1:exon
so has part: feature:504960-505057:1:exon
so has part: feature:505232-505397:1:exon
so has part: feature:505490-505558:1:exon
so has part: feature:505646-505725:1:exon
so has part: feature:505971-506048:1:exon
so has part: feature:506238-506340:1:exon
so has part: feature:506411-506581:1:exon
so has part: feature:506698-506811:1:exon
so has part: feature:506952-507065:1:exon
so has part: feature:507260-507358:1:exon
so has part: feature:507445-507570:1:exon
so has part: feature:508522-509464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493416-493722:1:exon

position:493722:1
position: 493722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499882-500003:1:exon

position:499882:1
position: 499882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500003:1
position: 500003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500108-500190:1:exon

position:500108:1
position: 500108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500190:1
position: 500190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500642-500891:1:exon

position:500642:1
position: 500642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500891:1
position: 500891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501941-502024:1:exon

position:501941:1
position: 501941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502024:1
position: 502024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502301-502508:1:exon

position:502301:1
position: 502301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502508:1
position: 502508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502764-502957:1:exon

position:502764:1
position: 502764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502957:1
position: 502957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503203-503291:1:exon

position:503203:1
position: 503203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503291:1
position: 503291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503444-503580:1:exon

position:503444:1
position: 503444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503580:1
position: 503580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:503778-503864:1:exon

position:503778:1
position: 503778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503864:1
position: 503864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:503948-504015:1:exon

position:503948:1
position: 503948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504015:1
position: 504015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504252-504388:1:exon

position:504252:1
position: 504252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504388:1
position: 504388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:504715-504861:1:exon

position:504715:1
position: 504715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504861:1
position: 504861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:504960-505057:1:exon

position:504960:1
position: 504960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505057:1
position: 505057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:505232-505397:1:exon

position:505232:1
position: 505232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505397:1
position: 505397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:505490-505558:1:exon

position:505490:1
position: 505490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505558:1
position: 505558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:505646-505725:1:exon

position:505646:1
position: 505646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505725:1
position: 505725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:505971-506048:1:exon

position:505971:1
position: 505971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506048:1
position: 506048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:506238-506340:1:exon

position:506238:1
position: 506238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506340:1
position: 506340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:506411-506581:1:exon

position:506411:1
position: 506411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506581:1
position: 506581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:506698-506811:1:exon

position:506698:1
position: 506698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506811:1
position: 506811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:506952-507065:1:exon

position:506952:1
position: 506952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507065:1
position: 507065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:507260-507358:1:exon

position:507260:1
position: 507260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507358:1
position: 507358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:507445-507570:1:exon

position:507445:1
position: 507445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507570:1
position: 507570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:508522-509464:1:exon

position:508522:1
position: 508522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: ITGA3
product: integrin subunit alpha 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005831402.1
SIO_010081: ITGA3
so part of: ITGA3
location: join(493417..493722,499882..500003,500108..500190,500642..500891,501941..502024,502301..502508,502764..502957,503203..503291,503444..503580,503778..503864,503948..504015,504252..504388,504715..504861,504960..505057,505232..505397,505490..505558,505646..505725,505971..506048,506238..506340,506411..506581,506698..506811,506952..507065,507260..507358,507445..507570,508117..508277,508522..508639)
location: region:493417-508639:1
so has part: feature:493417-493722:1:exon
so has part: feature:499882-500003:1:exon
so has part: feature:500108-500190:1:exon
so has part: feature:500642-500891:1:exon
so has part: feature:501941-502024:1:exon
so has part: feature:502301-502508:1:exon
so has part: feature:502764-502957:1:exon
so has part: feature:503203-503291:1:exon
so has part: feature:503444-503580:1:exon
so has part: feature:503778-503864:1:exon
so has part: feature:503948-504015:1:exon
so has part: feature:504252-504388:1:exon
so has part: feature:504715-504861:1:exon
so has part: feature:504960-505057:1:exon
so has part: feature:505232-505397:1:exon
so has part: feature:505490-505558:1:exon
so has part: feature:505646-505725:1:exon
so has part: feature:505971-506048:1:exon
so has part: feature:506238-506340:1:exon
so has part: feature:506411-506581:1:exon
so has part: feature:506698-506811:1:exon
so has part: feature:506952-507065:1:exon
so has part: feature:507260-507358:1:exon
so has part: feature:507445-507570:1:exon
so has part: feature:508117-508277:1:exon
so has part: feature:508522-508639:1:exon

position:493417:1
position: 493417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508639:1
position: 508639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493417-493722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499882-500003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500108-500190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500642-500891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501941-502024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502301-502508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502764-502957:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503203-503291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503444-503580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503778-503864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503948-504015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504252-504388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504715-504861:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504960-505057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505232-505397:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505490-505558:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:505646-505725:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:505971-506048:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:506238-506340:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506411-506581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506698-506811:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:506952-507065:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:507260-507358:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507445-507570:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508117-508277:1:exon

position:508117:1
position: 508117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508277:1
position: 508277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:508522-508639:1:exon

ITGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ITGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-3
translation: MAGRPGLLPLLGALLGAAAAFNLDRVFPVLKEGATPGGFFGFSVALHRQTERRERCLLLVGAPQDVEPTNTTRTGAVYACPLTASTSDCQRLDIELKSEPDKAIIDDMWLGVTVASQRQPAGRVLACAHRYTKVLWSGSEDQRRMVGKCYVRGNDLRLNISDEWQTYHNEMCNSNTDTDETGMCQMGTSAGFTANIIYFGAPGAYNWQGTNYMLQREMWELHEFSYPNKRNGNTYIGYTTEVGRAVLQKDAVTVVTGAPRYKHRGAVYLLSRSPQQTLQRSLLLPGHQVGSYFGSAVALADLNNDGWQDLVVGAPYYFQRKQEVGGAVYVYMNEVGDFQTHPSLVLTGPSNSAFGFAVASIGDINQDGFQDIAVGAPFEGHGKVYIYHSSAEGLLDKPRQVISGSDLDPDHMWTFGYSLSGGLDVDGNSYPDLLVGSLAERIVLLRSRPVINILNKTFTVSPSKVDPARCTPDSCITVTICFSYNQSAGDPNYKEKITLEYILEADKDRHPPRVRFLGTHSATYHGIFPMPETRCESKELLLLDNIRDKLHPIVLSMNYSLVEKPRTFQLGPHSLDAFPVLNQDQSHENETKIEFQKECGSDNKCYSNLQLQSSFVTDQNQPLHRLNGTQVLQYSRDVRKLYLSINITNVPTTPSNGEDAHEALLNVTVPASLLPSSVRPSGACTFAETVLCELGNPFKRNQRAELIITFEAIGIMLDTREILVWLDLSTQSTQEDLQPVLAKLLVDYSIQSSLTIASSHAQSHFSGTVVGESAMQREQDVGSPLSFDFQVTTKGESLGTLGTILLGFEWPYEIPNGKWLLYPTEILVNSNETCQPPGGVINPLNLTLLEDQASARQRRELEPPEPAEPPVTLATTKKARSEVVLSCSKGTARCIWFECALLHTQHPTTFSIRARVWNSTFIEEYSDFDRVKVDGTATLFLRTHVPTINMRNHTVRFSVDVDSELIEEQPAEIALWLVLVAVAAGLLLLGLIILLLWKCDFFQRTRYYRIMPKYHAVRIRQEQRYQPGGLLPRRCKKHWVTKWQEPEKYY
SIO_010081: ITGA3
subclass of: SO_0000673
so part of: ITGA3
location: join(493553..493722,499882..500003,500108..500190,500642..500891,501941..502024,502301..502508,502764..502957,503203..503291,503444..503580,503778..503864,503948..504015,504252..504388,504715..504861,504960..505057,505232..505397,505490..505558,505646..505725,505971..506048,506238..506340,506411..506581,506698..506811,506952..507065,507260..507358,507445..507570,508522..508680)
location: region:493553-508680:1
so has part: feature:493553-493722:1:exon
so has part: feature:499882-500003:1:exon
so has part: feature:500108-500190:1:exon
so has part: feature:500642-500891:1:exon
so has part: feature:501941-502024:1:exon
so has part: feature:502301-502508:1:exon
so has part: feature:502764-502957:1:exon
so has part: feature:503203-503291:1:exon
so has part: feature:503444-503580:1:exon
so has part: feature:503778-503864:1:exon
so has part: feature:503948-504015:1:exon
so has part: feature:504252-504388:1:exon
so has part: feature:504715-504861:1:exon
so has part: feature:504960-505057:1:exon
so has part: feature:505232-505397:1:exon
so has part: feature:505490-505558:1:exon
so has part: feature:505646-505725:1:exon
so has part: feature:505971-506048:1:exon
so has part: feature:506238-506340:1:exon
so has part: feature:506411-506581:1:exon
so has part: feature:506698-506811:1:exon
so has part: feature:506952-507065:1:exon
so has part: feature:507260-507358:1:exon
so has part: feature:507445-507570:1:exon
so has part: feature:508522-508680:1:exon

XP_040473598.1
type: Protein
SIO_000068: ncbiprotein

position:493553:1
position: 493553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508680:1
position: 508680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493553-493722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499882-500003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500108-500190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500642-500891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501941-502024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502301-502508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502764-502957:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503203-503291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503444-503580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503778-503864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503948-504015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504252-504388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504715-504861:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504960-505057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505232-505397:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505490-505558:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:505646-505725:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:505971-506048:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:506238-506340:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506411-506581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506698-506811:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:506952-507065:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:507260-507358:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507445-507570:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508522-508680:1:exon

PDK2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509835..516233
location: region:509835-516233:1
so has part: feature:509835-516233:1:exon
subclass of: SO_0000010

121099050
type: Gene
SIO_000068: ncbigene

position:509835:1
position: 509835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516233:1
position: 516233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509835-516233:1:exon

PDK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PDK2
product: pyruvate dehydrogenase kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040617670.1
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(509835..510025,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514693..514800,515279..515392,515478..516233)
location: region:509835-516233:1
so has part: feature:509835-510025:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-516233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509835-510025:1:exon

position:510025:1
position: 510025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

position:511497:1
position: 511497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511638:1
position: 511638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

position:512748:1
position: 512748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512819:1
position: 512819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

position:513108:1
position: 513108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513292:1
position: 513292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

position:513760:1
position: 513760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513849:1
position: 513849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

position:514145:1
position: 514145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514222:1
position: 514222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

position:514325:1
position: 514325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514401:1
position: 514401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:514693-514800:1:exon

position:514693:1
position: 514693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514800:1
position: 514800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:515279-515392:1:exon

position:515279:1
position: 515279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515392:1
position: 515392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:515478-516233:1:exon

position:515478:1
position: 515478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PDK2
product: pyruvate dehydrogenase kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040617668.1
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(509837..510025,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..516233)
location: region:509837-516233:1
so has part: feature:509837-510025:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-516233:1:exon

position:509837:1
position: 509837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509837-510025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514481-514579:1:exon

position:514481:1
position: 514481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514579:1
position: 514579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:515478-516233:1:exon

PDK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 2 isoform X1
translation: MRLLRWLGKRAALAGVPTYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFAFLRQELPVRLSNIMKEINLLPDRVLRTPSVQLVQSWYVQSLLDIMAFLDRDPEDQATLGQFTDALVTIRNRHNDVVPTMAQGVIEYKEAYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLLFDGSTNPAHPKHIGSIDPHCSVANVVRDAYNMAKLLCDKYYMSSPDLEIEEVNASNAQQPINIVYVPSHLYHMLFELFKNAMRATVESHENSPRLPAIKVMVALGQEDLSIKMSDRGMGVPLRKIERLFSYMYSTAPTPQPGTGGAPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQASQEAGDWCVPSTEPKNTSTYRVP
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(509908..510025,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..515618)
location: region:509908-515618:1
so has part: feature:509908-510025:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-515618:1:exon

XP_040473602.1
type: Protein
SIO_000068: ncbiprotein

position:509908:1
position: 509908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515618:1
position: 515618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509908-510025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514481-514579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:515478-515618:1:exon

PDK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 2 isoform X2
translation: MRLLRWLGKRAALAGVPTYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFAFLRQELPVRLSNIMKEINLLPDRVLRTPSVQLVQSWYVQSLLDIMAFLDRDPEDQATLGQFTDALVTIRNRHNDVVPTMAQGVIEYKEAYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLLFDGSTNPAHPKHIGSIDPHCSVANVVRDAYNMAKLLCDKYYMSSPDLEIEEVNASNAQQPINIVYVPSHLYHMLFELFKMSDRGMGVPLRKIERLFSYMYSTAPTPQPGTGGAPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQASQEAGDWCVPSTEPKNTSTYRVP
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(509908..510025,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514693..514800,515279..515392,515478..515618)
location: region:509908-515618:1
so has part: feature:509908-510025:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-515618:1:exon

XP_040473604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509908-510025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515478-515618:1:exon

PDK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PDK2
product: pyruvate dehydrogenase kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617671.1
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(509909..510025,510291..510347,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..516233)
location: region:509909-516233:1
so has part: feature:509909-510025:1:exon
so has part: feature:510291-510347:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-516233:1:exon

position:509909:1
position: 509909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509909-510025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510291-510347:1:exon

position:510291:1
position: 510291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510347:1
position: 510347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514481-514579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:515478-516233:1:exon

PDK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PDK2
product: pyruvate dehydrogenase kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040617672.1
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(510291..510400,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..516233)
location: region:510291-516233:1
so has part: feature:510291-510400:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-516233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510291-510400:1:exon

position:510400:1
position: 510400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514481-514579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:515478-516233:1:exon

PDK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 2 isoform X3
translation: MPPSPGSSNACEKTSFAFLRQELPVRLSNIMKEINLLPDRVLRTPSVQLVQSWYVQSLLDIMAFLDRDPEDQATLGQFTDALVTIRNRHNDVVPTMAQGVIEYKEAYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLLFDGSTNPAHPKHIGSIDPHCSVANVVRDAYNMAKLLCDKYYMSSPDLEIEEVNASNAQQPINIVYVPSHLYHMLFELFKNAMRATVESHENSPRLPAIKVMVALGQEDLSIKMSDRGMGVPLRKIERLFSYMYSTAPTPQPGTGGAPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQASQEAGDWCVPSTEPKNTSTYRVP
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(510332..510347,511497..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..515618)
location: region:510332-515618:1
so has part: feature:510332-510347:1:exon
so has part: feature:511497-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-515618:1:exon

XP_040473605.1
type: Protein
SIO_000068: ncbiprotein

position:510332:1
position: 510332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510332-510347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511497-511638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514481-514579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:515478-515618:1:exon

PDK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PDK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase kinase, isozyme 2 isoform X4
translation: MKEINLLPDRVLRTPSVQLVQSWYVQSLLDIMAFLDRDPEDQATLGQFTDALVTIRNRHNDVVPTMAQGVIEYKEAYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLLFDGSTNPAHPKHIGSIDPHCSVANVVRDAYNMAKLLCDKYYMSSPDLEIEEVNASNAQQPINIVYVPSHLYHMLFELFKNAMRATVESHENSPRLPAIKVMVALGQEDLSIKMSDRGMGVPLRKIERLFSYMYSTAPTPQPGTGGAPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQASQEAGDWCVPSTEPKNTSTYRVP
SIO_010081: PDK2
subclass of: SO_0000673
so part of: PDK2
location: join(511571..511638,512748..512819,513108..513292,513760..513849,514145..514222,514325..514401,514481..514579,514693..514800,515279..515392,515478..515618)
location: region:511571-515618:1
so has part: feature:511571-511638:1:exon
so has part: feature:512748-512819:1:exon
so has part: feature:513108-513292:1:exon
so has part: feature:513760-513849:1:exon
so has part: feature:514145-514222:1:exon
so has part: feature:514325-514401:1:exon
so has part: feature:514481-514579:1:exon
so has part: feature:514693-514800:1:exon
so has part: feature:515279-515392:1:exon
so has part: feature:515478-515618:1:exon

XP_040473606.1
type: Protein
SIO_000068: ncbiprotein

position:511571:1
position: 511571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511571-511638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512748-512819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513108-513292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513760-513849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514145-514222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514325-514401:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514481-514579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514693-514800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515279-515392:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515478-515618:1:exon

SAMD14
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SAMD14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516531..522072)
location: region:516531-522072:-1
so has part: feature:516531-522072:-1:exon
subclass of: SO_0000010

121098987
type: Gene
SIO_000068: ncbigene

position:516531:-1
position: 516531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522072:-1
position: 522072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516531-522072:-1:exon

SAMD14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SAMD14
product: sterile alpha motif domain containing 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617563.1
SIO_010081: SAMD14
subclass of: SO_0000673
so part of: SAMD14
location: complement(join(516531..517159,517603..517758,517846..517959,518403..518559,518635..518709,519004..519091,519187..519286,519560..519696,520911..520962,521921..522072))
location: region:516531-522072:-1
so has part: feature:521921-522072:-1:exon
so has part: feature:520911-520962:-1:exon
so has part: feature:519560-519696:-1:exon
so has part: feature:519187-519286:-1:exon
so has part: feature:519004-519091:-1:exon
so has part: feature:518635-518709:-1:exon
so has part: feature:518403-518559:-1:exon
so has part: feature:517846-517959:-1:exon
so has part: feature:517603-517758:-1:exon
so has part: feature:516531-517159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521921-522072:-1:exon

position:521921:-1
position: 521921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520911-520962:-1:exon

position:520911:-1
position: 520911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520962:-1
position: 520962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:519560-519696:-1:exon

position:519560:-1
position: 519560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519696:-1
position: 519696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519187-519286:-1:exon

position:519187:-1
position: 519187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519286:-1
position: 519286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519004-519091:-1:exon

position:519004:-1
position: 519004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519091:-1
position: 519091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:518635-518709:-1:exon

position:518635:-1
position: 518635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518709:-1
position: 518709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:518403-518559:-1:exon

position:518403:-1
position: 518403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518559:-1
position: 518559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:517846-517959:-1:exon

position:517846:-1
position: 517846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517959:-1
position: 517959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:517603-517758:-1:exon

position:517603:-1
position: 517603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517758:-1
position: 517758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:516531-517159:-1:exon

position:517159:-1
position: 517159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMD14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SAMD14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 14
translation: MSVSKLQDVDEVFETPRLDSSLQKARARLLAKGRRHRPSRSRLRDSASSTEGDEGPEAAEGLAGTPLPQPCHSSDSSPGFARRDARPQRHSEDDSRDMSPPEPASPTVGLDKKTRRKFLDLGVTLRRASSSKSRKEKGSNRLSMGSREVVEGPSRPSGSPFLPFSWFSDSARGSASPGSASPTGSPRHEGLSPAKSASQDSTLSEDSPPPSASPRLPGPPPTKCSYPYHTLSQSSDEFLDEPPGAAAGWTCQQVGQWLESLNLEQYVEEFSAHGVDGPRLLHLDGAKLKALGVGSSQDRAVLKRKLKELSLAVEKERKAQEKAEKQREKQKKRDQEQRRS
SIO_010081: SAMD14
subclass of: SO_0000673
so part of: SAMD14
location: complement(join(517004..517159,517603..517758,517846..517959,518403..518559,518635..518709,519004..519091,519187..519286,519560..519696,520911..520950))
location: region:517004-520950:-1
so has part: feature:520911-520950:-1:exon
so has part: feature:519560-519696:-1:exon
so has part: feature:519187-519286:-1:exon
so has part: feature:519004-519091:-1:exon
so has part: feature:518635-518709:-1:exon
so has part: feature:518403-518559:-1:exon
so has part: feature:517846-517959:-1:exon
so has part: feature:517603-517758:-1:exon
so has part: feature:517004-517159:-1:exon

XP_040473497.1
type: Protein
SIO_000068: ncbiprotein

position:517004:-1
position: 517004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520950:-1
position: 520950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520911-520950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519560-519696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519187-519286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519004-519091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518635-518709:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518403-518559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:517846-517959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517603-517758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517004-517159:-1:exon

PPP1R9B
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PPP1R9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(523448..533567)
location: region:523448-533567:-1
so has part: feature:523448-533567:-1:exon
subclass of: SO_0000010

121098985
type: Gene
SIO_000068: ncbigene

position:523448:-1
position: 523448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533567:-1
position: 533567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523448-533567:-1:exon

PPP1R9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PPP1R9B
product: protein phosphatase 1 regulatory subunit 9B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_040617558.1
SIO_010081: PPP1R9B
subclass of: SO_0000673
so part of: PPP1R9B
location: complement(join(523448..524578,525889..525985,526494..526723,527373..527426,527517..527669,527818..527953,528382..528486,528667..528787,528912..529044,532264..533567))
location: region:523448-533567:-1
so has part: feature:532264-533567:-1:exon
so has part: feature:528912-529044:-1:exon
so has part: feature:528667-528787:-1:exon
so has part: feature:528382-528486:-1:exon
so has part: feature:527818-527953:-1:exon
so has part: feature:527517-527669:-1:exon
so has part: feature:527373-527426:-1:exon
so has part: feature:526494-526723:-1:exon
so has part: feature:525889-525985:-1:exon
so has part: feature:523448-524578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532264-533567:-1:exon

position:532264:-1
position: 532264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528912-529044:-1:exon

position:528912:-1
position: 528912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529044:-1
position: 529044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528667-528787:-1:exon

position:528667:-1
position: 528667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528787:-1
position: 528787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528382-528486:-1:exon

position:528382:-1
position: 528382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528486:-1
position: 528486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:527818-527953:-1:exon

position:527818:-1
position: 527818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527953:-1
position: 527953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:527517-527669:-1:exon

position:527517:-1
position: 527517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527669:-1
position: 527669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:527373-527426:-1:exon

position:527373:-1
position: 527373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527426:-1
position: 527426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:526494-526723:-1:exon

position:526494:-1
position: 526494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526723:-1
position: 526723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525889-525985:-1:exon

position:525889:-1
position: 525889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525985:-1
position: 525985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:523448-524578:-1:exon

position:524578:-1
position: 524578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PPP1R9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurabin-2
translation: MLRTEAGGGAAAGGGAPSGGAAGGGGLRSASPHRNAYEATIQALAPTKEADGEDGKKSRGKKYGSNVHRIKNMFLQMGTAPGPEGACDLAKAKEKPVRLSLPRAGSLSESMDQGSLLKLGTSVSERVSRFDSKPDKPFSKLQETRKIFERSPQEKATTTKLLLRKERAGFQDRKLDVVVRFNGSTESLDKLDTEAVSPTVSQLSAVFEKADLRNNLHKAPGRAGGPLNAKVVGKRPRVFLPSPEAGRLGDGHAALARSRPPEEEKAVGKSGRPAEKETAAPRVQEVCKIKPVEVEESGEAEEEEEEATVAGEPVPAPQPAKGAEGQVPTAPRLEGGLGAAAGEEGVKGERAEEGDTYEEAKKEDFSEADLVDISAYSGLGEDSGGSGLEEEEEAEGLYEPESGCVEIPGLSEEEEPVPNRKIQFSTAPIQVFSTYSNEDYDRRNEDVDPMAASAEYELEKRVERLDLFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLIVEVDGTSLVGVTQSFAASVLRNTKGRVRFLIGREKPGEQSEVAQLIQQTLEQERWQREMIEQRYTQYTEDDEETGEYATDEEEEMSPMFPSGEMAIEVFELAENEDTLSPVEMDPEKLVHKFKELQIKHAVTEAEIQQLKRKLHCLEQEKARWRAEKAQLEQSVEENKERMEKLEGYWMEAQNLCQAVDEHLKETQAQYQTLERKYSKAKRLIKEYQQKEIEFLKKETAQRRVLEESELAHKEEMEKLQEKISELEAKLQTLKNSNPT
SIO_010081: PPP1R9B
subclass of: SO_0000673
so part of: PPP1R9B
location: complement(join(524525..524578,525889..525985,526494..526723,527373..527426,527517..527669,527818..527953,528382..528486,528667..528787,528912..529044,532264..533553))
location: region:524525-533553:-1
so has part: feature:532264-533553:-1:exon
so has part: feature:528912-529044:-1:exon
so has part: feature:528667-528787:-1:exon
so has part: feature:528382-528486:-1:exon
so has part: feature:527818-527953:-1:exon
so has part: feature:527517-527669:-1:exon
so has part: feature:527373-527426:-1:exon
so has part: feature:526494-526723:-1:exon
so has part: feature:525889-525985:-1:exon
so has part: feature:524525-524578:-1:exon

XP_040473492.1
type: Protein
SIO_000068: ncbiprotein

position:524525:-1
position: 524525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533553:-1
position: 533553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532264-533553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528912-529044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528667-528787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528382-528486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527818-527953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527517-527669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527373-527426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526494-526723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525889-525985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524525-524578:-1:exon

SGCA
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SGCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 535684..540441
location: region:535684-540441:1
so has part: feature:535684-540441:1:exon
subclass of: SO_0000010

121098986
type: Gene
SIO_000068: ncbigene

position:535684:1
position: 535684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540441:1
position: 540441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535684-540441:1:exon

SGCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SGCA
product: sarcoglycan alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040617560.1
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(535684..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..540441)
location: region:535684-540441:1
so has part: feature:535684-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-540441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535684-536084:1:exon

position:536084:1
position: 536084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

position:536571:1
position: 536571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536723:1
position: 536723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

position:537857:1
position: 537857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537999:1
position: 537999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

position:538087:1
position: 538087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538159:1
position: 538159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

position:538243:1
position: 538243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538441:1
position: 538441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

position:538549:1
position: 538549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538711:1
position: 538711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

position:538796:1
position: 538796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539001:1
position: 539001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

position:539175:1
position: 539175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539201:1
position: 539201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:539697-540441:1:exon

position:539697:1
position: 539697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SGCA
product: sarcoglycan alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040617561.1
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(535684..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..539889,540323..540441)
location: region:535684-540441:1
so has part: feature:535684-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-539889:1:exon
so has part: feature:540323-540441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535684-536084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539697-539889:1:exon

position:539889:1
position: 539889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:540323-540441:1:exon

position:540323:1
position: 540323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SGCA
product: sarcoglycan alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040617562.1
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(535684..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..539876,540323..540441)
location: region:535684-540441:1
so has part: feature:535684-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-539876:1:exon
so has part: feature:540323-540441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535684-536084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539697-539876:1:exon

position:539876:1
position: 539876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:540323-540441:1:exon

SGCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SGCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-sarcoglycan isoform X2
translation: MEAPKLLRAWVLAVMALGESQPTLPNHHVLPNHRVSSETGAIFVHELERELFQDAFLTGHEDDGAAPITFQAHLQDHPDLPRWLRYIQRDPHQPGYLYGCPMATEVGTHTIEVLAYNRHTYETAAQHLVITIFPAPGGEPPYQGEFLVGNRNVEELLPAAMRDIFLQATAGVWERDDLHVINVTSTLDRGGRVPLPIEGRKEGVYVKVGSRGAFSSCLAAATSPQSRFRCSLGQQPLASCYDTFAPHFTIRWCNLTLLQVWPSPTALGPVWGSGVLEEGGDFQPPTEVPPQDLLPGYLVTLLVPLAVAALLCLLLGHLMCCRREGVQKRDLETSDIQLVHHTTIHSDTEELRHMARSRDVPRPLSTLPMFNIRTGQRINPMPGPPDGACVPLLPQ
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(536045..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..539876,540323..540326)
location: region:536045-540326:1
so has part: feature:536045-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-539876:1:exon
so has part: feature:540323-540326:1:exon

XP_040473496.1
type: Protein
SIO_000068: ncbiprotein

position:536045:1
position: 536045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540326:1
position: 540326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536045-536084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539697-539876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:540323-540326:1:exon

SGCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SGCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-sarcoglycan isoform X1
translation: MEAPKLLRAWVLAVMALGESQPTLPNHHVLPNHRVSSETGAIFVHELERELFQDAFLTGHEDDGAAPITFQAHLQDHPDLPRWLRYIQRDPHQPGYLYGCPMATEVGTHTIEVLAYNRHTYETAAQHLVITIFPAPGGEPPYQGEFLVGNRNVEELLPAAMRDIFLQATAGVWERDDLHVINVTSTLDRGGRVPLPIEGRKEGVYVKVGSRGAFSSCLAAATSPQSRFRCSLGQQPLASCYDTFAPHFTIRWCNLTLLQVWPSPTALGPVWGSGVLEEGGDFQPPTEVPPQDLLPGYLVTLLVPLAVAALLCLLLGHLMCCRREGVQKRDLETSDIQLVHHTTIHSDTEELRHMARSRDVPRPLSTLPMFNIRTGQRINPMPGPPDGACVPLLPQ
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(536045..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..539880)
location: region:536045-539880:1
so has part: feature:536045-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-539880:1:exon

XP_040473494.1
type: Protein
SIO_000068: ncbiprotein

position:539880:1
position: 539880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536045-536084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539697-539880:1:exon

SGCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SGCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-sarcoglycan isoform X1
translation: MEAPKLLRAWVLAVMALGESQPTLPNHHVLPNHRVSSETGAIFVHELERELFQDAFLTGHEDDGAAPITFQAHLQDHPDLPRWLRYIQRDPHQPGYLYGCPMATEVGTHTIEVLAYNRHTYETAAQHLVITIFPAPGGEPPYQGEFLVGNRNVEELLPAAMRDIFLQATAGVWERDDLHVINVTSTLDRGGRVPLPIEGRKEGVYVKVGSRGAFSSCLAAATSPQSRFRCSLGQQPLASCYDTFAPHFTIRWCNLTLLQVWPSPTALGPVWGSGVLEEGGDFQPPTEVPPQDLLPGYLVTLLVPLAVAALLCLLLGHLMCCRREGVQKRDLETSDIQLVHHTTIHSDTEELRHMARSRDVPRPLSTLPMFNIRTGQRINPMPGPPDGACVPLLPQ
SIO_010081: SGCA
subclass of: SO_0000673
so part of: SGCA
location: join(536045..536084,536571..536723,537857..537999,538087..538159,538243..538441,538549..538711,538796..539001,539175..539201,539697..539880)
location: region:536045-539880:1
so has part: feature:536045-536084:1:exon
so has part: feature:536571-536723:1:exon
so has part: feature:537857-537999:1:exon
so has part: feature:538087-538159:1:exon
so has part: feature:538243-538441:1:exon
so has part: feature:538549-538711:1:exon
so has part: feature:538796-539001:1:exon
so has part: feature:539175-539201:1:exon
so has part: feature:539697-539880:1:exon

XP_040473495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536045-536084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536571-536723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537857-537999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538087-538159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538243-538441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538549-538711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538796-539001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539175-539201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539697-539880:1:exon

LOC121098978
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541941..542735
location: region:541941-542735:1
so has part: feature:541941-542735:1:exon
subclass of: SO_0000011

121098978
type: Gene
SIO_000068: ncbigene

position:541941:1
position: 541941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542735:1
position: 542735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541941-542735:1:exon

LOC121098978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098978
product: uncharacterized LOC121098978
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005831386.1
SIO_010081: LOC121098978
subclass of: SO_0000673
so part of: LOC121098978
location: join(541941..542090,542196..542735)
location: region:541941-542735:1
so has part: feature:541941-542090:1:exon
so has part: feature:542196-542735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541941-542090:1:exon

position:542090:1
position: 542090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542196-542735:1:exon

position:542196:1
position: 542196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL1A1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: COL1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(543547..558769)
location: region:543547-558769:-1
so has part: feature:543547-558769:-1:exon
subclass of: SO_0000010

121098975
type: Gene
SIO_000068: ncbigene

position:543547:-1
position: 543547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558769:-1
position: 558769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543547-558769:-1:exon

COL1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: COL1A1
product: collagen type I alpha 1 chain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040617538.1
SIO_010081: COL1A1
subclass of: SO_0000673
so part of: COL1A1
location: complement(join(543547..543780,543860..544102,544179..544369,544935..545217,545304..545411,545575..545628,545725..545832,545945..545998,546261..546368,546467..546520,546738..546845,546974..547081,547227..547388,547596..547649,548054..548107,548200..548307,548411..548464,548573..548626,548743..548850,549203..549310,549524..549622,549723..549767,550041..550094,550219..550272,550377..550431,550794..550847,551129..551227,551312..551365,551583..551681,551894..551947,552249..552356,552449..552502,552765..552863,552943..552987,553072..553170,553502..553555,553756..553800,553914..553967,554251..554295,554397..554450,554553..554606,554790..554843,554971..555024,555236..555289,555572..555616,556078..556146,556232..556324,556409..556444,556540..556574,556759..556953,558580..558769))
location: region:543547-558769:-1
so has part: feature:558580-558769:-1:exon
so has part: feature:556759-556953:-1:exon
so has part: feature:556540-556574:-1:exon
so has part: feature:556409-556444:-1:exon
so has part: feature:556232-556324:-1:exon
so has part: feature:556078-556146:-1:exon
so has part: feature:555572-555616:-1:exon
so has part: feature:555236-555289:-1:exon
so has part: feature:554971-555024:-1:exon
so has part: feature:554790-554843:-1:exon
so has part: feature:554553-554606:-1:exon
so has part: feature:554397-554450:-1:exon
so has part: feature:554251-554295:-1:exon
so has part: feature:553914-553967:-1:exon
so has part: feature:553756-553800:-1:exon
so has part: feature:553502-553555:-1:exon
so has part: feature:553072-553170:-1:exon
so has part: feature:552943-552987:-1:exon
so has part: feature:552765-552863:-1:exon
so has part: feature:552449-552502:-1:exon
so has part: feature:552249-552356:-1:exon
so has part: feature:551894-551947:-1:exon
so has part: feature:551583-551681:-1:exon
so has part: feature:551312-551365:-1:exon
so has part: feature:551129-551227:-1:exon
so has part: feature:550794-550847:-1:exon
so has part: feature:550377-550431:-1:exon
so has part: feature:550219-550272:-1:exon
so has part: feature:550041-550094:-1:exon
so has part: feature:549723-549767:-1:exon
so has part: feature:549524-549622:-1:exon
so has part: feature:549203-549310:-1:exon
so has part: feature:548743-548850:-1:exon
so has part: feature:548573-548626:-1:exon
so has part: feature:548411-548464:-1:exon
so has part: feature:548200-548307:-1:exon
so has part: feature:548054-548107:-1:exon
so has part: feature:547596-547649:-1:exon
so has part: feature:547227-547388:-1:exon
so has part: feature:546974-547081:-1:exon
so has part: feature:546738-546845:-1:exon
so has part: feature:546467-546520:-1:exon
so has part: feature:546261-546368:-1:exon
so has part: feature:545945-545998:-1:exon
so has part: feature:545725-545832:-1:exon
so has part: feature:545575-545628:-1:exon
so has part: feature:545304-545411:-1:exon
so has part: feature:544935-545217:-1:exon
so has part: feature:544179-544369:-1:exon
so has part: feature:543860-544102:-1:exon
so has part: feature:543547-543780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558580-558769:-1:exon

position:558580:-1
position: 558580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556759-556953:-1:exon

position:556759:-1
position: 556759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556953:-1
position: 556953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556540-556574:-1:exon

position:556540:-1
position: 556540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556574:-1
position: 556574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:556409-556444:-1:exon

position:556409:-1
position: 556409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556444:-1
position: 556444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556232-556324:-1:exon

position:556232:-1
position: 556232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556324:-1
position: 556324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556078-556146:-1:exon

position:556078:-1
position: 556078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556146:-1
position: 556146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555572-555616:-1:exon

position:555572:-1
position: 555572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555616:-1
position: 555616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:555236-555289:-1:exon

position:555236:-1
position: 555236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555289:-1
position: 555289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554971-555024:-1:exon

position:554971:-1
position: 554971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555024:-1
position: 555024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554790-554843:-1:exon

position:554790:-1
position: 554790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554843:-1
position: 554843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:554553-554606:-1:exon

position:554553:-1
position: 554553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554606:-1
position: 554606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:554397-554450:-1:exon

position:554397:-1
position: 554397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554450:-1
position: 554450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:554251-554295:-1:exon

position:554251:-1
position: 554251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554295:-1
position: 554295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:553914-553967:-1:exon

position:553914:-1
position: 553914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553967:-1
position: 553967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:553756-553800:-1:exon

position:553756:-1
position: 553756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553800:-1
position: 553800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:553502-553555:-1:exon

position:553502:-1
position: 553502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553555:-1
position: 553555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:553072-553170:-1:exon

position:553072:-1
position: 553072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553170:-1
position: 553170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:552943-552987:-1:exon

position:552943:-1
position: 552943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552987:-1
position: 552987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:552765-552863:-1:exon

position:552765:-1
position: 552765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552863:-1
position: 552863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:552449-552502:-1:exon

position:552449:-1
position: 552449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552502:-1
position: 552502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:552249-552356:-1:exon

position:552249:-1
position: 552249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552356:-1
position: 552356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:551894-551947:-1:exon

position:551894:-1
position: 551894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551947:-1
position: 551947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:551583-551681:-1:exon

position:551583:-1
position: 551583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551681:-1
position: 551681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:551312-551365:-1:exon

position:551312:-1
position: 551312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551365:-1
position: 551365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:551129-551227:-1:exon

position:551129:-1
position: 551129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551227:-1
position: 551227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:550794-550847:-1:exon

position:550794:-1
position: 550794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550847:-1
position: 550847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:550377-550431:-1:exon

position:550377:-1
position: 550377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550431:-1
position: 550431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:550219-550272:-1:exon

position:550219:-1
position: 550219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550272:-1
position: 550272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:550041-550094:-1:exon

position:550041:-1
position: 550041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550094:-1
position: 550094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:549723-549767:-1:exon

position:549723:-1
position: 549723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549767:-1
position: 549767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:549524-549622:-1:exon

position:549524:-1
position: 549524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549622:-1
position: 549622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:549203-549310:-1:exon

position:549203:-1
position: 549203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549310:-1
position: 549310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:548743-548850:-1:exon

position:548743:-1
position: 548743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548850:-1
position: 548850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:548573-548626:-1:exon

position:548573:-1
position: 548573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548626:-1
position: 548626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:548411-548464:-1:exon

position:548411:-1
position: 548411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548464:-1
position: 548464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:548200-548307:-1:exon

position:548200:-1
position: 548200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548307:-1
position: 548307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:548054-548107:-1:exon

position:548054:-1
position: 548054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548107:-1
position: 548107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:547596-547649:-1:exon

position:547596:-1
position: 547596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547649:-1
position: 547649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:547227-547388:-1:exon

position:547227:-1
position: 547227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547388:-1
position: 547388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:546974-547081:-1:exon

position:546974:-1
position: 546974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547081:-1
position: 547081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:546738-546845:-1:exon

position:546738:-1
position: 546738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546845:-1
position: 546845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:546467-546520:-1:exon

position:546467:-1
position: 546467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546520:-1
position: 546520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:546261-546368:-1:exon

position:546261:-1
position: 546261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546368:-1
position: 546368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:545945-545998:-1:exon

position:545945:-1
position: 545945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545998:-1
position: 545998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:545725-545832:-1:exon

position:545725:-1
position: 545725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545832:-1
position: 545832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:545575-545628:-1:exon

position:545575:-1
position: 545575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545628:-1
position: 545628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:545304-545411:-1:exon

position:545304:-1
position: 545304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545411:-1
position: 545411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:544935-545217:-1:exon

position:544935:-1
position: 544935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545217:-1
position: 545217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:544179-544369:-1:exon

position:544179:-1
position: 544179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544369:-1
position: 544369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:543860-544102:-1:exon

position:543860:-1
position: 543860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544102:-1
position: 544102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:543547-543780:-1:exon

position:543780:-1
position: 543780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: COL1A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(I) chain
translation: MFSFVDSRLLLLIAATVLLTRGQGEEDIQTGSCIQDGLTYNDKDVWKPEPCQICVCDSGNILCDEVICEDTSDCPNAEIPFGECCPICPDTDASPVYPESAGVEGPKGDTGPKGDRGLPGPPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQMSYGYDEKAGGMAVPGPMGPAGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGEPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGARGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGPAGPKGSPGEAGRPGEPGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGAPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPGERGAAGLPGAKGDRGDPGPKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGETGDAGAKGDAGPPGPAGPTGAPGPAGAVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGGKGPRGETGPAGRPGEPGPAGPPGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSPGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPQGPAGPPGPAGARGPAGPQGPRGDKGETGEQGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGDVGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTRKNPARTCRDLKMCHGDWKSGEYWIDPNQGCNLDAIKVYCNMETGETCVYPTQATIAQKNWYLSKNPKEKKHIWFGETMSDGFQFEYGGEGSNPADVAIQLTFLRLMSTEATQNITYHCKNSVAYMDHDTGNLKKALLLQGANEIEIRAEGNSRFTYGVTEDGCTSHTGAWGKTVIEYKTTKTSRLPIIDLAPMDVGAPDQEFGIDIGPVCFL
SIO_010081: COL1A1
subclass of: SO_0000673
so part of: COL1A1
location: complement(join(543634..543780,543860..544102,544179..544369,544935..545217,545304..545411,545575..545628,545725..545832,545945..545998,546261..546368,546467..546520,546738..546845,546974..547081,547227..547388,547596..547649,548054..548107,548200..548307,548411..548464,548573..548626,548743..548850,549203..549310,549524..549622,549723..549767,550041..550094,550219..550272,550377..550431,550794..550847,551129..551227,551312..551365,551583..551681,551894..551947,552249..552356,552449..552502,552765..552863,552943..552987,553072..553170,553502..553555,553756..553800,553914..553967,554251..554295,554397..554450,554553..554606,554790..554843,554971..555024,555236..555289,555572..555616,556078..556146,556232..556324,556409..556444,556540..556574,556759..556953,558580..558661))
location: region:543634-558661:-1
so has part: feature:558580-558661:-1:exon
so has part: feature:556759-556953:-1:exon
so has part: feature:556540-556574:-1:exon
so has part: feature:556409-556444:-1:exon
so has part: feature:556232-556324:-1:exon
so has part: feature:556078-556146:-1:exon
so has part: feature:555572-555616:-1:exon
so has part: feature:555236-555289:-1:exon
so has part: feature:554971-555024:-1:exon
so has part: feature:554790-554843:-1:exon
so has part: feature:554553-554606:-1:exon
so has part: feature:554397-554450:-1:exon
so has part: feature:554251-554295:-1:exon
so has part: feature:553914-553967:-1:exon
so has part: feature:553756-553800:-1:exon
so has part: feature:553502-553555:-1:exon
so has part: feature:553072-553170:-1:exon
so has part: feature:552943-552987:-1:exon
so has part: feature:552765-552863:-1:exon
so has part: feature:552449-552502:-1:exon
so has part: feature:552249-552356:-1:exon
so has part: feature:551894-551947:-1:exon
so has part: feature:551583-551681:-1:exon
so has part: feature:551312-551365:-1:exon
so has part: feature:551129-551227:-1:exon
so has part: feature:550794-550847:-1:exon
so has part: feature:550377-550431:-1:exon
so has part: feature:550219-550272:-1:exon
so has part: feature:550041-550094:-1:exon
so has part: feature:549723-549767:-1:exon
so has part: feature:549524-549622:-1:exon
so has part: feature:549203-549310:-1:exon
so has part: feature:548743-548850:-1:exon
so has part: feature:548573-548626:-1:exon
so has part: feature:548411-548464:-1:exon
so has part: feature:548200-548307:-1:exon
so has part: feature:548054-548107:-1:exon
so has part: feature:547596-547649:-1:exon
so has part: feature:547227-547388:-1:exon
so has part: feature:546974-547081:-1:exon
so has part: feature:546738-546845:-1:exon
so has part: feature:546467-546520:-1:exon
so has part: feature:546261-546368:-1:exon
so has part: feature:545945-545998:-1:exon
so has part: feature:545725-545832:-1:exon
so has part: feature:545575-545628:-1:exon
so has part: feature:545304-545411:-1:exon
so has part: feature:544935-545217:-1:exon
so has part: feature:544179-544369:-1:exon
so has part: feature:543860-544102:-1:exon
so has part: feature:543634-543780:-1:exon

XP_040473472.1
type: Protein
SIO_000068: ncbiprotein

position:543634:-1
position: 543634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558661:-1
position: 558661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558580-558661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556759-556953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556540-556574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556409-556444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556232-556324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556078-556146:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555572-555616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555236-555289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554971-555024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554790-554843:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:554553-554606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:554397-554450:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554251-554295:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553914-553967:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:553756-553800:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:553502-553555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:553072-553170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:552943-552987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:552765-552863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:552449-552502:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:552249-552356:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551894-551947:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551583-551681:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:551312-551365:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:551129-551227:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550794-550847:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:550377-550431:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:550219-550272:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:550041-550094:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:549723-549767:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:549524-549622:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:549203-549310:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:548743-548850:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:548573-548626:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:548411-548464:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:548200-548307:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:548054-548107:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:547596-547649:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:547227-547388:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:546974-547081:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:546738-546845:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:546467-546520:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:546261-546368:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:545945-545998:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:545725-545832:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:545575-545628:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:545304-545411:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:544935-545217:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:544179-544369:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:543860-544102:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:543634-543780:-1:exon

LOC121098977
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 546005..550224
location: region:546005-550224:1
so has part: feature:546005-550224:1:exon
subclass of: SO_0000011

121098977
type: Gene
SIO_000068: ncbigene

position:546005:1
position: 546005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550224:1
position: 550224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546005-550224:1:exon

LOC121098977
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098977
product: uncharacterized LOC121098977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005831385.1
SIO_010081: LOC121098977
subclass of: SO_0000673
so part of: LOC121098977
location: join(546005..546157,546293..546404,548056..548140,550052..550224)
location: region:546005-550224:1
so has part: feature:546005-546157:1:exon
so has part: feature:546293-546404:1:exon
so has part: feature:548056-548140:1:exon
so has part: feature:550052-550224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546005-546157:1:exon

position:546157:1
position: 546157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546293-546404:1:exon

position:546293:1
position: 546293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546404:1
position: 546404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548056-548140:1:exon

position:548056:1
position: 548056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548140:1
position: 548140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550052-550224:1:exon

position:550052:1
position: 550052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098976
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550410..553077
location: region:550410-553077:1
so has part: feature:550410-553077:1:exon
subclass of: SO_0000011

121098976
type: Gene
SIO_000068: ncbigene

position:550410:1
position: 550410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553077:1
position: 553077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550410-553077:1:exon

LOC121098976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098976
product: uncharacterized LOC121098976
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005831384.1
SIO_010081: LOC121098976
subclass of: SO_0000673
so part of: LOC121098976
location: join(550410..550527,550626..550881,551869..551967,552963..553077)
location: region:550410-553077:1
so has part: feature:550410-550527:1:exon
so has part: feature:550626-550881:1:exon
so has part: feature:551869-551967:1:exon
so has part: feature:552963-553077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550410-550527:1:exon

position:550527:1
position: 550527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550626-550881:1:exon

position:550626:1
position: 550626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550881:1
position: 550881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551869-551967:1:exon

position:551869:1
position: 551869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551967:1
position: 551967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552963-553077:1:exon

position:552963:1
position: 552963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121099182
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121099182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576802..583658)
location: region:576802-583658:-1
so has part: feature:576802-583658:-1:exon
subclass of: SO_0000010

121099182
type: Gene
SIO_000068: ncbigene

position:576802:-1
position: 576802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583658:-1
position: 583658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576802-583658:-1:exon

LOC121099182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121099182
product: all-trans-retinol 13,14-reductase-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617815.1
SIO_010081: LOC121099182
subclass of: SO_0000673
so part of: LOC121099182
location: complement(join(576802..577056,577261..577420,578058..578224,578344..578453,578553..578691,579145..579270,579374..579572,580057..580252,581589..581818,583124..583306,583420..583658))
location: region:576802-583658:-1
so has part: feature:583420-583658:-1:exon
so has part: feature:583124-583306:-1:exon
so has part: feature:581589-581818:-1:exon
so has part: feature:580057-580252:-1:exon
so has part: feature:579374-579572:-1:exon
so has part: feature:579145-579270:-1:exon
so has part: feature:578553-578691:-1:exon
so has part: feature:578344-578453:-1:exon
so has part: feature:578058-578224:-1:exon
so has part: feature:577261-577420:-1:exon
so has part: feature:576802-577056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583420-583658:-1:exon

position:583420:-1
position: 583420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583124-583306:-1:exon

position:583124:-1
position: 583124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583306:-1
position: 583306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581589-581818:-1:exon

position:581589:-1
position: 581589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581818:-1
position: 581818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580057-580252:-1:exon

position:580057:-1
position: 580057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580252:-1
position: 580252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579374-579572:-1:exon

position:579374:-1
position: 579374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579572:-1
position: 579572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579145-579270:-1:exon

position:579145:-1
position: 579145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579270:-1
position: 579270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578553-578691:-1:exon

position:578553:-1
position: 578553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578691:-1
position: 578691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578344-578453:-1:exon

position:578344:-1
position: 578344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578453:-1
position: 578453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:578058-578224:-1:exon

position:578058:-1
position: 578058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578224:-1
position: 578224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:577261-577420:-1:exon

position:577261:-1
position: 577261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577420:-1
position: 577420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:576802-577056:-1:exon

position:577056:-1
position: 577056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121099182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121099182
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: all-trans-retinol 13,14-reductase-like
translation: MVAAMWATLLLLLALGTLALGLVAHRLLAPAGNPFTWPPPGPPRPLVTEPRARDKVLKRGFSAHRVPPELDAVVIGSGIGGLAAAGTLAKVGKRVLVLEQHDQAGGCCHTFQEQGSEFDVGIHYVGQMHEGSMLRVALDQLTDGQLCWQRLPDPYDEVCLGPRRYQLRAGKAAFATALEEQFPAEKAAIREFMRLSKVASRHVALLAVLKMVPWWLAAFLVRTGLVYWISPVFRMAATSHSEAVARLTADRDLRALFSYLFYGTSPQDSSFLVNVLMVHHYQRGAWYPRGGASEIAFHAVPLIERAGGAVLVRAPVTRILVSPAGTAVGVVVQKGPSEEEVEIFAPLVISDAGIFNTFGKLLPPQLRGHPGVRSRLAMVRHGMGSFLVFVGLRGSAAELALPATNFWIYPHNDLDAMMTRYAALSRDDVPENLAMMFITFPAAKDPTYEQRHPGRSCMTILTMARYEWFEEWAGTRAKHRGPDYQQYKLAIAQRLLERALQRFPHLRDKVEFVEAASPLTNQHYLAAPRGEMYGTEHEVGRFSPAVVAAMRAKTPVKNLYLTGQDVFSCGLAGALHGGLLCASTVLGRLLYLDLLLLKKKIKRCRGQQAA
SIO_010081: LOC121099182
subclass of: SO_0000673
so part of: LOC121099182
location: complement(join(576911..577056,577261..577420,578058..578224,578344..578453,578553..578691,579145..579270,579374..579572,580057..580252,581589..581818,583124..583306,583420..583597))
location: region:576911-583597:-1
so has part: feature:583420-583597:-1:exon
so has part: feature:583124-583306:-1:exon
so has part: feature:581589-581818:-1:exon
so has part: feature:580057-580252:-1:exon
so has part: feature:579374-579572:-1:exon
so has part: feature:579145-579270:-1:exon
so has part: feature:578553-578691:-1:exon
so has part: feature:578344-578453:-1:exon
so has part: feature:578058-578224:-1:exon
so has part: feature:577261-577420:-1:exon
so has part: feature:576911-577056:-1:exon

XP_040473749.1
type: Protein
SIO_000068: ncbiprotein

position:576911:-1
position: 576911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583597:-1
position: 583597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583420-583597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583124-583306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581589-581818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580057-580252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579374-579572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579145-579270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578553-578691:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578344-578453:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578058-578224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577261-577420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576911-577056:-1:exon

MPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585499..593455)
location: region:585499-593455:-1
so has part: feature:585499-593455:-1:exon
subclass of: SO_0000010

121099166
type: Gene
SIO_000068: ncbigene

position:585499:-1
position: 585499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593455:-1
position: 593455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585499-593455:-1:exon

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MPP2
product: membrane palmitoylated protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617797.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585499..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591439..591539,593355..593455))
location: region:585499-593455:-1
so has part: feature:593355-593455:-1:exon
so has part: feature:591439-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585499-585819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593355-593455:-1:exon

position:593355:-1
position: 593355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591439-591539:-1:exon

position:591439:-1
position: 591439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591539:-1
position: 591539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

position:590361:-1
position: 590361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590513:-1
position: 590513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

position:590127:-1
position: 590127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590276:-1
position: 590276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

position:589178:-1
position: 589178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589405:-1
position: 589405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

position:587991:-1
position: 587991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588122:-1
position: 588122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

position:587541:-1
position: 587541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587646:-1
position: 587646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

position:587120:-1
position: 587120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587188:-1
position: 587188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

position:586796:-1
position: 586796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586957:-1
position: 586957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

position:586114:-1
position: 586114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586316:-1
position: 586316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

position:585898:-1
position: 585898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586026:-1
position: 586026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:585499-585819:-1:exon

position:585819:-1
position: 585819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MPP2
product: membrane palmitoylated protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617794.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585499..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591439..591539,592603..592711))
location: region:585499-592711:-1
so has part: feature:592603-592711:-1:exon
so has part: feature:591439-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585499-585819:-1:exon

position:592711:-1
position: 592711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592603-592711:-1:exon

position:592603:-1
position: 592603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591439-591539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585499-585819:-1:exon

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MPP2
product: membrane palmitoylated protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617795.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585500..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591539,593355..593455))
location: region:585500-593455:-1
so has part: feature:593355-593455:-1:exon
so has part: feature:591421-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585500-585819:-1:exon

position:585500:-1
position: 585500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593355-593455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591421-591539:-1:exon

position:591421:-1
position: 591421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585500-585819:-1:exon

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MPP2
product: membrane palmitoylated protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617796.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585500..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591539,593308..593418))
location: region:585500-593418:-1
so has part: feature:593308-593418:-1:exon
so has part: feature:591421-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585500-585819:-1:exon

position:593418:-1
position: 593418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593308-593418:-1:exon

position:593308:-1
position: 593308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591421-591539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585500-585819:-1:exon

MPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MPP2
product: membrane palmitoylated protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617793.1
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585500..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591539,592603..592711))
location: region:585500-592711:-1
so has part: feature:592603-592711:-1:exon
so has part: feature:591421-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585500-585819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592603-592711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591421-591539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585500-585819:-1:exon

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 2 isoform X2
translation: MSGPGRGAPPAPASAPLGPQAMQQVLDNLMGLPSTPGAADLDLIFLRGIMESPIAHERLEETKLEAVRDNNLELVQEILRDIGHLVRQDSAAAELACILREPHFQSLLETHDSVASKSYETPPPSPVLDPAFNNQPVPPDAVRMVGIRKTAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFTAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDVEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEMARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKENEKDGHGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTKIDSIRTVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPDPETLRAMNRAALESGVATKQLTEADAKRTVEESDRIQRGYGHYFDLSLTNDDLERTFGRLQEAMERLRTQPQWVPVSWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585643..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591439..591539,592603..592663))
location: region:585643-592663:-1
so has part: feature:592603-592663:-1:exon
so has part: feature:591439-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585643-585819:-1:exon

XP_040473728.1
type: Protein
SIO_000068: ncbiprotein

position:585643:-1
position: 585643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592663:-1
position: 592663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592603-592663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591439-591539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585643-585819:-1:exon

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 2 isoform X1
translation: MSGPGRGAPPAPASAPLGPQAMQQVLDNLMGLPSTPGAADLDLIFLRGIMESPIVRSLAKAHERLEETKLEAVRDNNLELVQEILRDIGHLVRQDSAAAELACILREPHFQSLLETHDSVASKSYETPPPSPVLDPAFNNQPVPPDAVRMVGIRKTAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFTAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDVEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEMARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKENEKDGHGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTKIDSIRTVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPDPETLRAMNRAALESGVATKQLTEADAKRTVEESDRIQRGYGHYFDLSLTNDDLERTFGRLQEAMERLRTQPQWVPVSWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585643..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591539,592603..592663))
location: region:585643-592663:-1
so has part: feature:592603-592663:-1:exon
so has part: feature:591421-591539:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585643-585819:-1:exon

XP_040473727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592603-592663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591421-591539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585643-585819:-1:exon

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 2 isoform X4
translation: MQQVLDNLMGLPSTPGAADLDLIFLRGIMESPIAHERLEETKLEAVRDNNLELVQEILRDIGHLVRQDSAAAELACILREPHFQSLLETHDSVASKSYETPPPSPVLDPAFNNQPVPPDAVRMVGIRKTAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFTAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDVEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEMARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKENEKDGHGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTKIDSIRTVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPDPETLRAMNRAALESGVATKQLTEADAKRTVEESDRIQRGYGHYFDLSLTNDDLERTFGRLQEAMERLRTQPQWVPVSWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585643..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591439..591537))
location: region:585643-591537:-1
so has part: feature:591439-591537:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585643-585819:-1:exon

XP_040473731.1
type: Protein
SIO_000068: ncbiprotein

position:591537:-1
position: 591537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591439-591537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585643-585819:-1:exon

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 2 isoform X3
translation: MQQVLDNLMGLPSTPGAADLDLIFLRGIMESPIVRSLAKAHERLEETKLEAVRDNNLELVQEILRDIGHLVRQDSAAAELACILREPHFQSLLETHDSVASKSYETPPPSPVLDPAFNNQPVPPDAVRMVGIRKTAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFTAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDVEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEMARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKENEKDGHGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTKIDSIRTVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPDPETLRAMNRAALESGVATKQLTEADAKRTVEESDRIQRGYGHYFDLSLTNDDLERTFGRLQEAMERLRTQPQWVPVSWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585643..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591537))
location: region:585643-591537:-1
so has part: feature:591421-591537:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585643-585819:-1:exon

XP_040473729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591421-591537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585643-585819:-1:exon

MPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 2 isoform X3
translation: MQQVLDNLMGLPSTPGAADLDLIFLRGIMESPIVRSLAKAHERLEETKLEAVRDNNLELVQEILRDIGHLVRQDSAAAELACILREPHFQSLLETHDSVASKSYETPPPSPVLDPAFNNQPVPPDAVRMVGIRKTAGENLGVTFRVERGELVIARILHGGMVAQQGLLHVGDVIREVNGREVGSDPRALQDSLRHASGSVVLKILPSYQEPHPPRQVFVKCHFDYDPATDSLIPCKEAGLKFTAGDLLQIVNQDDPNWWQACHVEGGSAGLVPSQLLEEKRKAFVKRDVEVAPTSGALCGSLSGKRKKRMMYLTTKNAEFDRHELLIYEEMARMPPFRRKTLVLIGAQGVGRRSLKNKLIMSDQARYGTTIPYTSRKPKENEKDGHGYRFVSRGEMEADIKAGRYLEHGEYEGNLYGTKIDSIRTVVEAGKMCILDVNPQAVKVLRTAEFVPYVVFIEAPDPETLRAMNRAALESGVATKQLTEADAKRTVEESDRIQRGYGHYFDLSLTNDDLERTFGRLQEAMERLRTQPQWVPVSWVY
SIO_010081: MPP2
subclass of: SO_0000673
so part of: MPP2
location: complement(join(585643..585819,585898..586026,586114..586316,586796..586957,587120..587188,587541..587646,587991..588122,589178..589405,590127..590276,590361..590513,591421..591537))
location: region:585643-591537:-1
so has part: feature:591421-591537:-1:exon
so has part: feature:590361-590513:-1:exon
so has part: feature:590127-590276:-1:exon
so has part: feature:589178-589405:-1:exon
so has part: feature:587991-588122:-1:exon
so has part: feature:587541-587646:-1:exon
so has part: feature:587120-587188:-1:exon
so has part: feature:586796-586957:-1:exon
so has part: feature:586114-586316:-1:exon
so has part: feature:585898-586026:-1:exon
so has part: feature:585643-585819:-1:exon

XP_040473730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591421-591537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590361-590513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590127-590276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589178-589405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587991-588122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587541-587646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587120-587188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586796-586957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586114-586316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585898-586026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585643-585819:-1:exon

LOC121098846
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(594856..595768)
location: region:594856-595768:-1
so has part: feature:594856-595768:-1:exon
subclass of: SO_0000010

121098846
type: Gene
SIO_000068: ncbigene

position:594856:-1
position: 594856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595768:-1
position: 595768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594856-595768:-1:exon

LOC121098846
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098846
product: pancreatic hormone-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_040617273.1
SIO_010081: LOC121098846
subclass of: SO_0000673
so part of: LOC121098846
location: complement(join(594856..594919,595590..595768))
location: region:594856-595768:-1
so has part: feature:595590-595768:-1:exon
so has part: feature:594856-594919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595590-595768:-1:exon

position:595590:-1
position: 595590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594856-594919:-1:exon

position:594919:-1
position: 594919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098846
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic hormone-like
translation: MAPRWPSLLLLACALVLLAGHPGSAGPTQPTYPGDDAPVEDLVRFYNDLQQYLNVVTRHRYGKRSDSLVLCEEPFGTTGC
SIO_010081: LOC121098846
subclass of: SO_0000673
so part of: LOC121098846
location: complement(join(594856..594919,595590..595768))
location: region:594856-595768:-1
so has part: feature:595590-595768:-1:exon
so has part: feature:594856-594919:-1:exon

XP_040473207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595590-595768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594856-594919:-1:exon

LOC121098905
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(597910..600037)
location: region:597910-600037:-1
so has part: feature:597910-600037:-1:exon
subclass of: SO_0000010

121098905
type: Gene
SIO_000068: ncbigene

position:597910:-1
position: 597910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600037:-1
position: 600037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597910-600037:-1:exon

LOC121098905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098905
product: peptide YY-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617408.1
SIO_010081: LOC121098905
subclass of: SO_0000673
so part of: LOC121098905
location: complement(join(597910..598196,598361..598432,598646..598833,599216..600037))
location: region:597910-600037:-1
so has part: feature:599216-600037:-1:exon
so has part: feature:598646-598833:-1:exon
so has part: feature:598361-598432:-1:exon
so has part: feature:597910-598196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599216-600037:-1:exon

position:599216:-1
position: 599216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598646-598833:-1:exon

position:598646:-1
position: 598646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598833:-1
position: 598833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598361-598432:-1:exon

position:598361:-1
position: 598361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598432:-1
position: 598432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:597910-598196:-1:exon

position:598196:-1
position: 598196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098905
product: peptide YY-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040617407.1
SIO_010081: LOC121098905
subclass of: SO_0000673
so part of: LOC121098905
location: complement(join(597910..598196,598361..598432,598646..598895))
location: region:597910-598895:-1
so has part: feature:598646-598895:-1:exon
so has part: feature:598361-598432:-1:exon
so has part: feature:597910-598196:-1:exon

position:598895:-1
position: 598895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598646-598895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598361-598432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597910-598196:-1:exon

LOC121098905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide YY-like isoform X1
translation: MGVIQTQRRLSPVPMQMVTSPRPWRMLVALALCALLCLGTLVAAYPPKPESPGDDASPEEMAKYFSALRHYINLVTRQRYGKRASPEAVVSELLLGASSDKSWYDDDSAW
SIO_010081: LOC121098905
subclass of: SO_0000673
so part of: LOC121098905
location: complement(join(598172..598196,598361..598432,598646..598881))
location: region:598172-598881:-1
so has part: feature:598646-598881:-1:exon
so has part: feature:598361-598432:-1:exon
so has part: feature:598172-598196:-1:exon

XP_040473341.1
type: Protein
SIO_000068: ncbiprotein

position:598172:-1
position: 598172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598881:-1
position: 598881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598646-598881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598361-598432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598172-598196:-1:exon

LOC121098905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide YY-like isoform X2
translation: MVTSPRPWRMLVALALCALLCLGTLVAAYPPKPESPGDDASPEEMAKYFSALRHYINLVTRQRYGKRASPEAVVSELLLGASSDKSWYDDDSAW
SIO_010081: LOC121098905
subclass of: SO_0000673
so part of: LOC121098905
location: complement(join(598172..598196,598361..598432,598646..598833))
location: region:598172-598833:-1
so has part: feature:598646-598833:-1:exon
so has part: feature:598361-598432:-1:exon
so has part: feature:598172-598196:-1:exon

XP_040473342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598646-598833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598361-598432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598172-598196:-1:exon

TMEM101
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(602298..604696)
location: region:602298-604696:-1
so has part: feature:602298-604696:-1:exon
subclass of: SO_0000010

121099098
type: Gene
SIO_000068: ncbigene

position:602298:-1
position: 602298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604696:-1
position: 604696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602298-604696:-1:exon

TMEM101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMEM101
product: transmembrane protein 101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040617745.1
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(602298..602895,603122..603268,603354..603534,604530..604696))
location: region:602298-604696:-1
so has part: feature:604530-604696:-1:exon
so has part: feature:603354-603534:-1:exon
so has part: feature:603122-603268:-1:exon
so has part: feature:602298-602895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604530-604696:-1:exon

position:604530:-1
position: 604530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603354-603534:-1:exon

position:603354:-1
position: 603354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603534:-1
position: 603534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603122-603268:-1:exon

position:603122:-1
position: 603122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603268:-1
position: 603268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602298-602895:-1:exon

position:602895:-1
position: 602895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMEM101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 101
translation: MAAGRGWRRRALRLLTAGGGVLLTRFPFWHCFSGLLLCAERAGGRRKPDIPVPYLYVDMGVAVLCASFMSFGVKRRWFALGAALQLAVATYAAHVGGHVHYSDWLKVRMYSRTIAIIGGFLILASGAGELYRQKPRSRSLQSTGQVFLGIYLICQAYSLQHSKEDRLAYLNHLLGGELALQLLFILYGLLALAFLSGYYVRAAAQVLAVLLPLAILLIDGNIGYWHDSRRVEFWNQMKLIGQNIGIFGAVVILATDG
SIO_010081: TMEM101
subclass of: SO_0000673
so part of: TMEM101
location: complement(join(602587..602895,603122..603268,603354..603534,604530..604666))
location: region:602587-604666:-1
so has part: feature:604530-604666:-1:exon
so has part: feature:603354-603534:-1:exon
so has part: feature:603122-603268:-1:exon
so has part: feature:602587-602895:-1:exon

XP_040473679.1
type: Protein
SIO_000068: ncbiprotein

position:602587:-1
position: 602587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604666:-1
position: 604666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604530-604666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603354-603534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603122-603268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602587-602895:-1:exon

LSM12
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LSM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605583..614656)
location: region:605583-614656:-1
so has part: feature:605583-614656:-1:exon
subclass of: SO_0000010

121098911
type: Gene
SIO_000068: ncbigene

position:605583:-1
position: 605583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614656:-1
position: 614656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605583-614656:-1:exon

LSM12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LSM12
product: LSM12 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617415.1
SIO_010081: LSM12
subclass of: SO_0000673
so part of: LSM12
location: complement(join(605583..605859,606071..606197,606645..606754,611685..611818,614458..614656))
location: region:605583-614656:-1
so has part: feature:614458-614656:-1:exon
so has part: feature:611685-611818:-1:exon
so has part: feature:606645-606754:-1:exon
so has part: feature:606071-606197:-1:exon
so has part: feature:605583-605859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614458-614656:-1:exon

position:614458:-1
position: 614458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611685-611818:-1:exon

position:611685:-1
position: 611685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611818:-1
position: 611818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606645-606754:-1:exon

position:606645:-1
position: 606645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606754:-1
position: 606754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606071-606197:-1:exon

position:606071:-1
position: 606071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606197:-1
position: 606197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605583-605859:-1:exon

position:605859:-1
position: 605859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LSM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM12 homolog
translation: MAAPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYPSKMLALKCPSSSGKPNHADILLVNLQYVSEVEIINDRTETPPPLASLNVSKLANKARTEKEEKMSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVIAPPYQVENCKGKEGSALSHVRKIVEKHFRDVESQKVMQRSQAQQTQKETSLSS
SIO_010081: LSM12
subclass of: SO_0000673
so part of: LSM12
location: complement(join(605767..605859,606071..606197,606645..606754,611685..611818,614458..614578))
location: region:605767-614578:-1
so has part: feature:614458-614578:-1:exon
so has part: feature:611685-611818:-1:exon
so has part: feature:606645-606754:-1:exon
so has part: feature:606071-606197:-1:exon
so has part: feature:605767-605859:-1:exon

XP_040473349.1
type: Protein
SIO_000068: ncbiprotein

position:605767:-1
position: 605767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614578:-1
position: 614578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614458-614578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611685-611818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606645-606754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606071-606197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605767-605859:-1:exon

G6PC3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 614682..620515
location: region:614682-620515:1
so has part: feature:614682-620515:1:exon
subclass of: SO_0000010

121098912
type: Gene
SIO_000068: ncbigene

position:614682:1
position: 614682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620515:1
position: 620515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614682-620515:1:exon

G6PC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: G6PC3
product: glucose-6-phosphatase catalytic subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040617418.1
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614682..614799,616293..616519,616859..616965,617579..617669,618061..618179,618287..618458,619600..620515)
location: region:614682-620515:1
so has part: feature:614682-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618287-618458:1:exon
so has part: feature:619600-620515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614682-614799:1:exon

position:614799:1
position: 614799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

position:616293:1
position: 616293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616519:1
position: 616519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

position:616859:1
position: 616859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616965:1
position: 616965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

position:617579:1
position: 617579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617669:1
position: 617669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

position:618061:1
position: 618061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618179:1
position: 618179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:618287-618458:1:exon

position:618287:1
position: 618287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618458:1
position: 618458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:619600-620515:1:exon

position:619600:1
position: 619600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

G6PC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: G6PC3
product: glucose-6-phosphatase catalytic subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040617416.1
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614682..614799,616293..616519,616859..616965,617579..617669,618061..618179,618287..618458,618562..619390)
location: region:614682-619390:1
so has part: feature:614682-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618287-618458:1:exon
so has part: feature:618562-619390:1:exon

position:619390:1
position: 619390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614682-614799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618287-618458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618562-619390:1:exon

position:618562:1
position: 618562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

G6PC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: G6PC3
product: glucose-6-phosphatase catalytic subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040617417.1
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614682..614799,616293..616519,616859..616965,617579..617669,618061..618179,618317..618458,618562..619390)
location: region:614682-619390:1
so has part: feature:614682-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618317-618458:1:exon
so has part: feature:618562-619390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614682-614799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618317-618458:1:exon

position:618317:1
position: 618317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618562-619390:1:exon

G6PC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase 3 isoform X3
translation: MPGGVGGSGPPGRMDALHTSGIHFAEALQSGPPWLEKFWISVTSLADPKCVFTICFPIAYFLDRKVGLSVLWIGLVSEWLNVVLKWFLFGERPFWWVHESGLTSKQLVTLRQFPVSCETGPGSPSGHCMITGAALWPLVTALTELASRQSRSLVVKLAPFGAYTLLLLAVGLSRVFILAHFPHQVVCGTLAEPQPACPHHPGAALGWGLQARTPATRTPGFFVAAALALLLSSLALHSLVIAAGIDIDWFRKGDTELQHSHLLPPGPPQNAAGRRRVLPETVLFIQGRTSVTSYKILN
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614770..614799,616293..616519,616859..616965,617579..617669,618061..618179,618287..618458,619600..619750)
location: region:614770-619750:1
so has part: feature:614770-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618287-618458:1:exon
so has part: feature:619600-619750:1:exon

XP_040473352.1
type: Protein
SIO_000068: ncbiprotein

position:614770:1
position: 614770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619750:1
position: 619750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614770-614799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618287-618458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619600-619750:1:exon

G6PC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase 3 isoform X1
translation: MPGGVGGSGPPGRMDALHTSGIHFAEALQSGPPWLEKFWISVTSLADPKCVFTICFPIAYFLDRKVGLSVLWIGLVSEWLNVVLKWFLFGERPFWWVHESGLTSKQLVTLRQFPVSCETGPGSPSGHCMITGAALWPLVTALTELASRQSRSLVVKLAPFGAYTLLLLAVGLSRVFILAHFPHQVVCGTLAEPQPACPHHPGAALGWGLQARTPATRTPGFFVAAALALLLSSLALHSLVIAAGIDIDWSIHLATKWCSNPTWLRLDTRPFASICRDTGSALGLGLAAGFPLQQGEQLDPWQRVASAMLALVAMQGLHQLLQPTDVTLWYSTSFLKYATGPWLVASLLPRLVLSLSRPQGSPHTD
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614770..614799,616293..616519,616859..616965,617579..617669,618061..618179,618287..618458,618562..618913)
location: region:614770-618913:1
so has part: feature:614770-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618287-618458:1:exon
so has part: feature:618562-618913:1:exon

XP_040473350.1
type: Protein
SIO_000068: ncbiprotein

position:618913:1
position: 618913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614770-614799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618287-618458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618562-618913:1:exon

G6PC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: G6PC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase 3 isoform X2
translation: MPGGVGGSGPPGRMDALHTSGIHFAEALQSGPPWLEKFWISVTSLADPKCVFTICFPIAYFLDRKVGLSVLWIGLVSEWLNVVLKWFLFGERPFWWVHESGLTSKQLVTLRQFPVSCETGPGSPSGHCMITGAALWPLVTALTELASRQSRSLVVKLAPFGAYTLLLLAVGLSRVFILAHFPHQVVCGTLAGAALGWGLQARTPATRTPGFFVAAALALLLSSLALHSLVIAAGIDIDWSIHLATKWCSNPTWLRLDTRPFASICRDTGSALGLGLAAGFPLQQGEQLDPWQRVASAMLALVAMQGLHQLLQPTDVTLWYSTSFLKYATGPWLVASLLPRLVLSLSRPQGSPHTD
SIO_010081: G6PC3
subclass of: SO_0000673
so part of: G6PC3
location: join(614770..614799,616293..616519,616859..616965,617579..617669,618061..618179,618317..618458,618562..618913)
location: region:614770-618913:1
so has part: feature:614770-614799:1:exon
so has part: feature:616293-616519:1:exon
so has part: feature:616859-616965:1:exon
so has part: feature:617579-617669:1:exon
so has part: feature:618061-618179:1:exon
so has part: feature:618317-618458:1:exon
so has part: feature:618562-618913:1:exon

XP_040473351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614770-614799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616293-616519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616859-616965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617579-617669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618061-618179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618317-618458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618562-618913:1:exon

HDAC5
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: HDAC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(621187..643288)
location: region:621187-643288:-1
so has part: feature:621187-643288:-1:exon
subclass of: SO_0000010

121098936
type: Gene
SIO_000068: ncbigene

position:621187:-1
position: 621187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643288:-1
position: 643288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621187-643288:-1:exon

HDAC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: HDAC5
product: histone deacetylase 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040617456.1
SIO_010081: HDAC5
subclass of: SO_0000673
so part of: HDAC5
location: complement(join(621187..621344,622010..622163,622796..622880,623103..623236,623324..623442,623837..623934,624047..624166,624263..624350,624469..624524,626139..626246,626329..626378,626497..626617,626688..626821,627272..627428,627984..628259,628694..628899,629012..629234,629910..630041,630420..630532,631227..631358,631473..631601,631703..631817,631931..632069,633341..633543,635987..636061,638447..638579,643204..643288))
location: region:621187-643288:-1
so has part: feature:643204-643288:-1:exon
so has part: feature:638447-638579:-1:exon
so has part: feature:635987-636061:-1:exon
so has part: feature:633341-633543:-1:exon
so has part: feature:631931-632069:-1:exon
so has part: feature:631703-631817:-1:exon
so has part: feature:631473-631601:-1:exon
so has part: feature:631227-631358:-1:exon
so has part: feature:630420-630532:-1:exon
so has part: feature:629910-630041:-1:exon
so has part: feature:629012-629234:-1:exon
so has part: feature:628694-628899:-1:exon
so has part: feature:627984-628259:-1:exon
so has part: feature:627272-627428:-1:exon
so has part: feature:626688-626821:-1:exon
so has part: feature:626497-626617:-1:exon
so has part: feature:626329-626378:-1:exon
so has part: feature:626139-626246:-1:exon
so has part: feature:624469-624524:-1:exon
so has part: feature:624263-624350:-1:exon
so has part: feature:624047-624166:-1:exon
so has part: feature:623837-623934:-1:exon
so has part: feature:623324-623442:-1:exon
so has part: feature:623103-623236:-1:exon
so has part: feature:622796-622880:-1:exon
so has part: feature:622010-622163:-1:exon
so has part: feature:621187-621344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643204-643288:-1:exon

position:643204:-1
position: 643204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638447-638579:-1:exon

position:638447:-1
position: 638447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638579:-1
position: 638579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635987-636061:-1:exon

position:635987:-1
position: 635987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636061:-1
position: 636061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633341-633543:-1:exon

position:633341:-1
position: 633341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633543:-1
position: 633543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631931-632069:-1:exon

position:631931:-1
position: 631931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632069:-1
position: 632069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:631703-631817:-1:exon

position:631703:-1
position: 631703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631817:-1
position: 631817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631473-631601:-1:exon

position:631473:-1
position: 631473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631601:-1
position: 631601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:631227-631358:-1:exon

position:631227:-1
position: 631227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631358:-1
position: 631358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:630420-630532:-1:exon

position:630420:-1
position: 630420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630532:-1
position: 630532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:629910-630041:-1:exon

position:629910:-1
position: 629910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630041:-1
position: 630041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:629012-629234:-1:exon

position:629012:-1
position: 629012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629234:-1
position: 629234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:628694-628899:-1:exon

position:628694:-1
position: 628694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628899:-1
position: 628899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:627984-628259:-1:exon

position:627984:-1
position: 627984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628259:-1
position: 628259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:627272-627428:-1:exon

position:627272:-1
position: 627272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627428:-1
position: 627428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:626688-626821:-1:exon

position:626688:-1
position: 626688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626821:-1
position: 626821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:626497-626617:-1:exon

position:626497:-1
position: 626497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626617:-1
position: 626617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:626329-626378:-1:exon

position:626329:-1
position: 626329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626378:-1
position: 626378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:626139-626246:-1:exon

position:626139:-1
position: 626139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626246:-1
position: 626246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:624469-624524:-1:exon

position:624469:-1
position: 624469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624524:-1
position: 624524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:624263-624350:-1:exon

position:624263:-1
position: 624263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624350:-1
position: 624350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:624047-624166:-1:exon

position:624047:-1
position: 624047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624166:-1
position: 624166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:623837-623934:-1:exon

position:623837:-1
position: 623837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623934:-1
position: 623934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:623324-623442:-1:exon

position:623324:-1
position: 623324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623442:-1
position: 623442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:623103-623236:-1:exon

position:623103:-1
position: 623103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623236:-1
position: 623236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:622796-622880:-1:exon

position:622796:-1
position: 622796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622880:-1
position: 622880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:622010-622163:-1:exon

position:622010:-1
position: 622010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622163:-1
position: 622163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:621187-621344:-1:exon

position:621344:-1
position: 621344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: HDAC5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone deacetylase 5
translation: MDPQSDTEGGSSREPSLELLSRAQLHAALPAPGVEGPAEACGECRGPGLDAAARERQLQRELLALKQQQQLQKQLLFAEFQKQHEHLTRQHEVQLQKHLKQQQEVLAARRQQELEQQRQRERQEALEQQQRLEQLHALRTKDKSRESAIASTEVKLKLQEFLLSKTKEPGTGPPNHSLPQHPKCWAHHTSLDQSSPPQSGSPGTPPSYKLPLLGTYEGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEITVSSVCSSAPGSGPSSPNSSHSAIAENGFTGSVPNIHAEQLLPQHRALTLDGTSQLSLYTSPSLPNISLGLQATVTVTNSHLNASPKLSPQQVEAERPAVATLRPGAALSGKFLSTSSIPGCLLGVALEGDPPAGPASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERAGSVRTVSKLPRHRPLSRTQSSPLPQSPQALPHGALPHGALQHHFLDKQQVQLGKLLPKPGELARQPPTHPEETEEELTEQQSPPPGDGVSPGAPLALISADAGDPPERLQDPEGCGVPCDEPGDSGDEAEVPGVPDVAELGVTYKQVFPEAQLQLYPAPSLGILALPHPALARTQSSPASAGIKPPAPDGPPKHLFTTGVVYDTFMLKHQCTCGNTNIHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKMYTVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGEIKNGFAVIRPPGHHAEESTAMGFCFFNSVAISAKLLQQKLSVGRILIVDWDIHHGNGTQQAFYSDPDVLYISLHRYDDGNFFPGSGAPEEVGSGMGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIANEFSPDMVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGHDLTAICDASEACVSALLGLELEPLDPSLLQQKPNVNAVATLEKVIEIQSKHWGSVKRFAAAVGCSLLEAQKGEAEEAETVTAMALLSVGAEQGGANPQPRPAEEPMEAEPAL
SIO_010081: HDAC5
subclass of: SO_0000673
so part of: HDAC5
location: complement(join(621305..621344,622010..622163,622796..622880,623103..623236,623324..623442,623837..623934,624047..624166,624263..624350,624469..624524,626139..626246,626329..626378,626497..626617,626688..626821,627272..627428,627984..628259,628694..628899,629012..629234,629910..630041,630420..630532,631227..631358,631473..631601,631703..631817,631931..632069,633341..633543,635987..636061,638447..638468))
location: region:621305-638468:-1
so has part: feature:638447-638468:-1:exon
so has part: feature:635987-636061:-1:exon
so has part: feature:633341-633543:-1:exon
so has part: feature:631931-632069:-1:exon
so has part: feature:631703-631817:-1:exon
so has part: feature:631473-631601:-1:exon
so has part: feature:631227-631358:-1:exon
so has part: feature:630420-630532:-1:exon
so has part: feature:629910-630041:-1:exon
so has part: feature:629012-629234:-1:exon
so has part: feature:628694-628899:-1:exon
so has part: feature:627984-628259:-1:exon
so has part: feature:627272-627428:-1:exon
so has part: feature:626688-626821:-1:exon
so has part: feature:626497-626617:-1:exon
so has part: feature:626329-626378:-1:exon
so has part: feature:626139-626246:-1:exon
so has part: feature:624469-624524:-1:exon
so has part: feature:624263-624350:-1:exon
so has part: feature:624047-624166:-1:exon
so has part: feature:623837-623934:-1:exon
so has part: feature:623324-623442:-1:exon
so has part: feature:623103-623236:-1:exon
so has part: feature:622796-622880:-1:exon
so has part: feature:622010-622163:-1:exon
so has part: feature:621305-621344:-1:exon

XP_040473390.1
type: Protein
SIO_000068: ncbiprotein

position:621305:-1
position: 621305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638468:-1
position: 638468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638447-638468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635987-636061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633341-633543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631931-632069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631703-631817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631473-631601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631227-631358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:630420-630532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629910-630041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629012-629234:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628694-628899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627984-628259:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627272-627428:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:626688-626821:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:626497-626617:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626329-626378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626139-626246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624469-624524:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624263-624350:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:624047-624166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:623837-623934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:623324-623442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:623103-623236:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:622796-622880:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:622010-622163:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:621305-621344:-1:exon

HROB
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: HROB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641039..644666
location: region:641039-644666:1
so has part: feature:641039-644666:1:exon
subclass of: SO_0000010

121098937
type: Gene
SIO_000068: ncbigene

position:641039:1
position: 641039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644666:1
position: 644666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641039-644666:1:exon

HROB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: HROB
product: homologous recombination factor with OB-fold
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040617457.1
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(641039..641085,641309..641359,641559..642473,642554..642637,642818..642958,643139..643247,643330..643415,643630..643737,643919..644112,644308..644666)
location: region:641039-644666:1
so has part: feature:641039-641085:1:exon
so has part: feature:641309-641359:1:exon
so has part: feature:641559-642473:1:exon
so has part: feature:642554-642637:1:exon
so has part: feature:642818-642958:1:exon
so has part: feature:643139-643247:1:exon
so has part: feature:643330-643415:1:exon
so has part: feature:643630-643737:1:exon
so has part: feature:643919-644112:1:exon
so has part: feature:644308-644666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641039-641085:1:exon

position:641085:1
position: 641085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641309-641359:1:exon

position:641309:1
position: 641309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641359:1
position: 641359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641559-642473:1:exon

position:641559:1
position: 641559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642473:1
position: 642473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:642554-642637:1:exon

position:642554:1
position: 642554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642637:1
position: 642637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642818-642958:1:exon

position:642818:1
position: 642818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642958:1
position: 642958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643139-643247:1:exon

position:643139:1
position: 643139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643247:1
position: 643247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643330-643415:1:exon

position:643330:1
position: 643330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643415:1
position: 643415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:643630-643737:1:exon

position:643630:1
position: 643630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643737:1
position: 643737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:643919-644112:1:exon

position:643919:1
position: 643919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644112:1
position: 644112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:644308-644666:1:exon

position:644308:1
position: 644308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HROB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: HROB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homologous recombination OB-fold protein
translation: MRRFGAGRLQKLFGADGDLADEDFLSAVEDAENQFVVPGRLSPGHGPPPPCAQPLRPLGPQPGRRPGKAPGLRPLARQGEQPTGCGGPPARGAAPQDELDNDLFLAACMELEGPELLAGTGQWEKPPWVRTGQGSPQERVAPKKLRVGDELVPPGSGRAEDRQDPLPTPQAAPAPKLVLRPSAASACPPQPPTPLGSPGGSWGFIPAPRGPALRPFQVPLCQPTASSSSVGPWVSRPPTAQAPRQGCPPSWLPPRPPTNPPALVSSVEPPPRQLLGPAPASLQTPVVTNHLVQLVTAASKAPGAAPRLPLQGKTRRFPGPAGILPQQHAGKLLENILVSAPQTPAHGAVMKPRMEGLPSASPPTEEDFGKGPWLAMKTELGLDERDPGCFLRTYSVVMVLRKAALKQLPKNKVPSMAVMIKTLTRTNIDAGAVFRDPTGEMQGTVHRLLLEERQSELRPGSVLLLKQVGVFSPSHRNHYLNVTSNNLLKIFPPEPEGSFSQREVPAKAGLLLDHHAQPPQGVPGPGDGGQSGTGSHSTEQSPGGFSLHLQSPGPGREDLVGADACDMDDLDGLLGELPEDFFSAPAQADCC
SIO_010081: HROB
subclass of: SO_0000673
so part of: HROB
location: join(641071..641085,641309..641359,641559..642473,642554..642637,642818..642958,643139..643247,643330..643415,643630..643737,643919..644112,644308..644381)
location: region:641071-644381:1
so has part: feature:641071-641085:1:exon
so has part: feature:641309-641359:1:exon
so has part: feature:641559-642473:1:exon
so has part: feature:642554-642637:1:exon
so has part: feature:642818-642958:1:exon
so has part: feature:643139-643247:1:exon
so has part: feature:643330-643415:1:exon
so has part: feature:643630-643737:1:exon
so has part: feature:643919-644112:1:exon
so has part: feature:644308-644381:1:exon

XP_040473391.1
type: Protein
SIO_000068: ncbiprotein

position:641071:1
position: 641071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644381:1
position: 644381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641071-641085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641309-641359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641559-642473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642554-642637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642818-642958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643139-643247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643330-643415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643630-643737:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:643919-644112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644308-644381:1:exon

ASB16
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ASB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644874..647672
location: region:644874-647672:1
so has part: feature:644874-647672:1:exon
subclass of: SO_0000010

121098938
type: Gene
SIO_000068: ncbigene

position:644874:1
position: 644874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647672:1
position: 647672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644874-647672:1:exon

ASB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ASB16
product: ankyrin repeat and SOCS box containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617458.1
SIO_010081: ASB16
subclass of: SO_0000673
so part of: ASB16
location: join(644874..645385,645722..645989,646574..647066,647139..647252,647346..647672)
location: region:644874-647672:1
so has part: feature:644874-645385:1:exon
so has part: feature:645722-645989:1:exon
so has part: feature:646574-647066:1:exon
so has part: feature:647139-647252:1:exon
so has part: feature:647346-647672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644874-645385:1:exon

position:645385:1
position: 645385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645722-645989:1:exon

position:645722:1
position: 645722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645989:1
position: 645989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646574-647066:1:exon

position:646574:1
position: 646574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647066:1
position: 647066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647139-647252:1:exon

position:647139:1
position: 647139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647252:1
position: 647252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647346-647672:1:exon

position:647346:1
position: 647346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ASB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 16
translation: MAQETFAFTSSALRSLRLQRELLEQEDRRRALAREWATRRFLPASPRPPLPPARRPQYCRDPAVHNALYTGDLLRIQSIFKDEITTNLVMEMVSEELVWSPEQGLWVLSPRRQQTSALRIAAGRGFGDCARHLLLRGAEVDAVVGGRAPLHDSVAAPHPDCARLLLAFGADPNVLSAEGTAPLHLCAAPESLPCAELLLAHGARVNLGTRERQVTALHVAARQGLVAHTELYLHHGADPAHRTHQGETPLNAACAAAERPDDAERYYRVAELLLAAGADPGAAGRKDHTPLHNACANGQPRLARLLLHHGADATVPNCAGYTPMDCALHAVEEYRHQHPEETIALLLGHGAGPVHPKMLKFCCRYPPALELVLNAYDRIPPAEGWLGAVPPELWEEHPDFYASVVRMAGQPRRLQHLARCAVRRCLGTRCHAAIPKLALPPPLRCYLQLPLEGLIS
SIO_010081: ASB16
subclass of: SO_0000673
so part of: ASB16
location: join(645076..645385,645722..645989,646574..647066,647139..647252,647346..647531)
location: region:645076-647531:1
so has part: feature:645076-645385:1:exon
so has part: feature:645722-645989:1:exon
so has part: feature:646574-647066:1:exon
so has part: feature:647139-647252:1:exon
so has part: feature:647346-647531:1:exon

XP_040473392.1
type: Protein
SIO_000068: ncbiprotein

position:645076:1
position: 645076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647531:1
position: 647531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645076-645385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645722-645989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646574-647066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647139-647252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647346-647531:1:exon

TMUB2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TMUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 648064..650443
location: region:648064-650443:1
so has part: feature:648064-650443:1:exon
subclass of: SO_0000010

121099085
type: Gene
SIO_000068: ncbigene

position:648064:1
position: 648064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650443:1
position: 650443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648064-650443:1:exon

TMUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMUB2
product: transmembrane and ubiquitin like domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040617730.1
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(648064..648365,648508..649324,649698..650443)
location: region:648064-650443:1
so has part: feature:648064-648365:1:exon
so has part: feature:648508-649324:1:exon
so has part: feature:649698-650443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648064-648365:1:exon

position:648365:1
position: 648365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648508-649324:1:exon

position:648508:1
position: 648508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649324:1
position: 649324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649698-650443:1:exon

position:649698:1
position: 649698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMUB2
product: transmembrane and ubiquitin like domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617731.1
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(648069..648097,648508..649324,649698..650443)
location: region:648069-650443:1
so has part: feature:648069-648097:1:exon
so has part: feature:648508-649324:1:exon
so has part: feature:649698-650443:1:exon

position:648069:1
position: 648069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648069-648097:1:exon

position:648097:1
position: 648097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648508-649324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649698-650443:1:exon

TMUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and ubiquitin-like domain-containing protein 2
translation: MEPPATAFIQGLGDEVTVMASVVALVLALVLAWLSTYVADSSSQLLGTIVTAGDAAVIRLGHVERYVGTAGAAEAPEPPRVPENTEEKTEEEAGAASGLAAEQGGSGSPPDPGLEPLLDIRSSPQQTSAAEPSTLGSRGGPPTPGGSDLCSGFIKIRLKFLNDTEEVAVVRPEDTVGVLKSKYFPGQESQMKFIYRGQLLQDQGRTLRSLHITDNCVIHCHRSCSAATALPDPSTTAPDASSLPLGTGNLMVPTVMVVLAIIWYFRINYRQLFTAPATVSLIGVTVLFSFLVFGMYGQ
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(648783..649324,649698..650052)
location: region:648783-650052:1
so has part: feature:648783-649324:1:exon
so has part: feature:649698-650052:1:exon

XP_040473664.1
type: Protein
SIO_000068: ncbiprotein

position:648783:1
position: 648783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650052:1
position: 650052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648783-649324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649698-650052:1:exon

TMUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and ubiquitin-like domain-containing protein 2
translation: MEPPATAFIQGLGDEVTVMASVVALVLALVLAWLSTYVADSSSQLLGTIVTAGDAAVIRLGHVERYVGTAGAAEAPEPPRVPENTEEKTEEEAGAASGLAAEQGGSGSPPDPGLEPLLDIRSSPQQTSAAEPSTLGSRGGPPTPGGSDLCSGFIKIRLKFLNDTEEVAVVRPEDTVGVLKSKYFPGQESQMKFIYRGQLLQDQGRTLRSLHITDNCVIHCHRSCSAATALPDPSTTAPDASSLPLGTGNLMVPTVMVVLAIIWYFRINYRQLFTAPATVSLIGVTVLFSFLVFGMYGQ
SIO_010081: TMUB2
subclass of: SO_0000673
so part of: TMUB2
location: join(648783..649324,649698..650052)
location: region:648783-650052:1
so has part: feature:648783-649324:1:exon
so has part: feature:649698-650052:1:exon

XP_040473665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:648783-649324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649698-650052:1:exon

ATXN7L3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ATXN7L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(650684..658487)
location: region:650684-658487:-1
so has part: feature:650684-658487:-1:exon
subclass of: SO_0000010

121099029
type: Gene
SIO_000068: ncbigene

position:650684:-1
position: 650684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658487:-1
position: 658487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650684-658487:-1:exon

ATXN7L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ATXN7L3
product: ataxin 7 like 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040617645.1
SIO_010081: ATXN7L3
subclass of: SO_0000673
so part of: ATXN7L3
location: complement(join(650684..652752,653058..653191,653512..653583,653721..653764,654127..654195,654303..654334,654587..654632,654775..654797,655040..655137,655701..655872,656349..656482,656564..656676,658279..658487))
location: region:650684-658487:-1
so has part: feature:658279-658487:-1:exon
so has part: feature:656564-656676:-1:exon
so has part: feature:656349-656482:-1:exon
so has part: feature:655701-655872:-1:exon
so has part: feature:655040-655137:-1:exon
so has part: feature:654775-654797:-1:exon
so has part: feature:654587-654632:-1:exon
so has part: feature:654303-654334:-1:exon
so has part: feature:654127-654195:-1:exon
so has part: feature:653721-653764:-1:exon
so has part: feature:653512-653583:-1:exon
so has part: feature:653058-653191:-1:exon
so has part: feature:650684-652752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658279-658487:-1:exon

position:658279:-1
position: 658279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656564-656676:-1:exon

position:656564:-1
position: 656564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656676:-1
position: 656676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656349-656482:-1:exon

position:656349:-1
position: 656349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656482:-1
position: 656482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655701-655872:-1:exon

position:655701:-1
position: 655701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655872:-1
position: 655872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655040-655137:-1:exon

position:655040:-1
position: 655040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655137:-1
position: 655137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:654775-654797:-1:exon

position:654775:-1
position: 654775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654797:-1
position: 654797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654587-654632:-1:exon

position:654587:-1
position: 654587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654632:-1
position: 654632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:654303-654334:-1:exon

position:654303:-1
position: 654303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654334:-1
position: 654334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:654127-654195:-1:exon

position:654127:-1
position: 654127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654195:-1
position: 654195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653721-653764:-1:exon

position:653721:-1
position: 653721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653764:-1
position: 653764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:653512-653583:-1:exon

position:653512:-1
position: 653512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653583:-1
position: 653583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:653058-653191:-1:exon

position:653058:-1
position: 653058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653191:-1
position: 653191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:650684-652752:-1:exon

position:652752:-1
position: 652752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATXN7L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ATXN7L3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ataxin-7-like protein 3
translation: MKMEDMSLSGLDNSKLEAIAHEIYTDLVEDACLGLCFEVHRAVKCGYFFLDDTDPDSMKDFEIVDQPGVDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIASSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGEIGGNPDPFKYSNSAGINYETLGPEELRTLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRSVRVYLLGPSASLPEAEGSVENDSFEVAESQAIMSRLQWDGSSDISPSDSASSKASTNNSESRKTKKKKPHLGLVSGAPGLGSSKKKKPKPPAPHTPSIYDDIN
SIO_010081: ATXN7L3
subclass of: SO_0000673
so part of: ATXN7L3
location: complement(join(652604..652752,653058..653191,653512..653583,653721..653764,654127..654195,654303..654334,654587..654632,654775..654797,655040..655137,655701..655872,656349..656482,656564..656614))
location: region:652604-656614:-1
so has part: feature:656564-656614:-1:exon
so has part: feature:656349-656482:-1:exon
so has part: feature:655701-655872:-1:exon
so has part: feature:655040-655137:-1:exon
so has part: feature:654775-654797:-1:exon
so has part: feature:654587-654632:-1:exon
so has part: feature:654303-654334:-1:exon
so has part: feature:654127-654195:-1:exon
so has part: feature:653721-653764:-1:exon
so has part: feature:653512-653583:-1:exon
so has part: feature:653058-653191:-1:exon
so has part: feature:652604-652752:-1:exon

XP_040473579.1
type: Protein
SIO_000068: ncbiprotein

position:652604:-1
position: 652604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656614:-1
position: 656614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656564-656614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656349-656482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655701-655872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655040-655137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654775-654797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654587-654632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654303-654334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654127-654195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653721-653764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653512-653583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:653058-653191:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:652604-652752:-1:exon

UBTF
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(659666..679286)
location: region:659666-679286:-1
so has part: feature:659666-679286:-1:exon
subclass of: SO_0000010

121098980
type: Gene
SIO_000068: ncbigene

position:659666:-1
position: 659666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679286:-1
position: 679286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659666-679286:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617545.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,679140..679286))
location: region:659666-679286:-1
so has part: feature:679140-679286:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679140-679286:-1:exon

position:679140:-1
position: 679140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

position:675048:-1
position: 675048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675179:-1
position: 675179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

position:671876:-1
position: 671876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672051:-1
position: 672051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

position:671485:-1
position: 671485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671568:-1
position: 671568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

position:670633:-1
position: 670633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670788:-1
position: 670788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

position:669825:-1
position: 669825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669889:-1
position: 669889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

position:669059:-1
position: 669059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669188:-1
position: 669188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

position:668473:-1
position: 668473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668583:-1
position: 668583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

position:668035:-1
position: 668035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668168:-1
position: 668168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

position:667458:-1
position: 667458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667599:-1
position: 667599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

position:667070:-1
position: 667070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667111:-1
position: 667111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

position:666167:-1
position: 666167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666280:-1
position: 666280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

position:665815:-1
position: 665815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665970:-1
position: 665970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

position:665162:-1
position: 665162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665317:-1
position: 665317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

position:664818:-1
position: 664818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664928:-1
position: 664928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

position:664640:-1
position: 664640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664728:-1
position: 664728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

position:664244:-1
position: 664244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664433:-1
position: 664433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

position:663912:-1
position: 663912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663959:-1
position: 663959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

position:663623:-1
position: 663623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663691:-1
position: 663691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

position:663069:-1
position: 663069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663215:-1
position: 663215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

position:662580:-1
position: 662580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662699:-1
position: 662699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

position:662162:-1
position: 662162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040617546.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,678815..678839))
location: region:659666-678839:-1
so has part: feature:678815-678839:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

position:678839:-1
position: 678839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678815-678839:-1:exon

position:678815:-1
position: 678815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040617543.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,678408..678716))
location: region:659666-678716:-1
so has part: feature:678408-678716:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

position:678716:-1
position: 678716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678408-678716:-1:exon

position:678408:-1
position: 678408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040617542.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,678277..678391))
location: region:659666-678391:-1
so has part: feature:678277-678391:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

position:678391:-1
position: 678391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678277-678391:-1:exon

position:678277:-1
position: 678277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040617554.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:659666-662162:-1:exon

position:677936:-1
position: 677936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

position:677841:-1
position: 677841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669068-669188:-1:exon

position:669068:-1
position: 669068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040617550.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040617552.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040617547.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040617549.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040617551.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040617541.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:659666-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040617544.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(659666..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677090..677275))
location: region:659666-677275:-1
so has part: feature:677090-677275:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:659666-662162:-1:exon

position:677275:-1
position: 677275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677090-677275:-1:exon

position:677090:-1
position: 677090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:659666-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X8
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473488.1
type: Protein
SIO_000068: ncbiprotein

position:662049:-1
position: 662049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675105:-1
position: 675105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X4
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X6
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X2
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669068..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669068-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669068-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X3
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X5
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDENDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X1
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDDDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662049..662162,662580..662699,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662049-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662580-662699:-1:exon
so has part: feature:662049-662162:-1:exon

XP_040473480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662580-662699:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662049-662162:-1:exon

UBTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UBTF
product: upstream binding transcription factor, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040617553.1
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662618..662733,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675179,677841..677936))
location: region:662618-677936:-1
so has part: feature:677841-677936:-1:exon
so has part: feature:675048-675179:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662618-662733:-1:exon

position:662618:-1
position: 662618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677841-677936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675048-675179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:662618-662733:-1:exon

position:662733:-1
position: 662733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UBTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar transcription factor 1 isoform X7
translation: MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAFKDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHSSDKEERGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEVTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPCSTNSAKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQGQKDHYKKLAEEQQKQYRVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEESEDGDEILSLVSAPFAPV
SIO_010081: UBTF
subclass of: SO_0000673
so part of: UBTF
location: complement(join(662695..662733,663069..663215,663623..663691,663912..663959,664244..664433,664640..664728,664818..664928,665162..665317,665815..665970,666167..666280,667070..667111,667458..667599,668035..668168,668473..668583,669059..669188,669825..669889,670633..670788,671485..671568,671876..672051,675048..675105))
location: region:662695-675105:-1
so has part: feature:675048-675105:-1:exon
so has part: feature:671876-672051:-1:exon
so has part: feature:671485-671568:-1:exon
so has part: feature:670633-670788:-1:exon
so has part: feature:669825-669889:-1:exon
so has part: feature:669059-669188:-1:exon
so has part: feature:668473-668583:-1:exon
so has part: feature:668035-668168:-1:exon
so has part: feature:667458-667599:-1:exon
so has part: feature:667070-667111:-1:exon
so has part: feature:666167-666280:-1:exon
so has part: feature:665815-665970:-1:exon
so has part: feature:665162-665317:-1:exon
so has part: feature:664818-664928:-1:exon
so has part: feature:664640-664728:-1:exon
so has part: feature:664244-664433:-1:exon
so has part: feature:663912-663959:-1:exon
so has part: feature:663623-663691:-1:exon
so has part: feature:663069-663215:-1:exon
so has part: feature:662695-662733:-1:exon

XP_040473487.1
type: Protein
SIO_000068: ncbiprotein

position:662695:-1
position: 662695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675048-675105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671876-672051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671485-671568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670633-670788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669825-669889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669059-669188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668473-668583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668035-668168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667458-667599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667070-667111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666167-666280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665815-665970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:665162-665317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664818-664928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:664640-664728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:664244-664433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:663912-663959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663623-663691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:663069-663215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:662695-662733:-1:exon

SLC4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683456..697759)
location: region:683456-697759:-1
so has part: feature:683456-697759:-1:exon
subclass of: SO_0000010

121098825
type: Gene
SIO_000068: ncbigene

position:683456:-1
position: 683456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697759:-1
position: 697759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683456-697759:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040617219.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694459,697660..697759))
location: region:683456-697759:-1
so has part: feature:697660-697759:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697660-697759:-1:exon

position:697660:-1
position: 697660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

position:694363:-1
position: 694363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694459:-1
position: 694459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:691709-691782:-1:exon

position:691709:-1
position: 691709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691782:-1
position: 691782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:691340-691517:-1:exon

position:691340:-1
position: 691340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691517:-1
position: 691517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691128-691263:-1:exon

position:691128:-1
position: 691128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691263:-1
position: 691263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690767-690902:-1:exon

position:690767:-1
position: 690767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690902:-1
position: 690902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690073-690148:-1:exon

position:690073:-1
position: 690073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690148:-1
position: 690148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689312-689496:-1:exon

position:689312:-1
position: 689312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689496:-1
position: 689496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:688249-688771:-1:exon

position:688249:-1
position: 688249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688771:-1
position: 688771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:687880-688028:-1:exon

position:687880:-1
position: 687880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688028:-1
position: 688028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:687185-687379:-1:exon

position:687185:-1
position: 687185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687379:-1
position: 687379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686273-686440:-1:exon

position:686273:-1
position: 686273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686440:-1
position: 686440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:685955-686044:-1:exon

position:685955:-1
position: 685955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686044:-1
position: 686044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:685661-685827:-1:exon

position:685661:-1
position: 685661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685827:-1
position: 685827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:685304-685557:-1:exon

position:685304:-1
position: 685304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685557:-1
position: 685557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:685049-685218:-1:exon

position:685049:-1
position: 685049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685218:-1
position: 685218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:684671-684844:-1:exon

position:684671:-1
position: 684671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684844:-1
position: 684844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:683456-684521:-1:exon

position:684521:-1
position: 684521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040617216.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,692969..693069,693200..693269,694363..694459,694584..694675,697660..697759))
location: region:683456-697759:-1
so has part: feature:697660-697759:-1:exon
so has part: feature:694584-694675:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:693200-693269:-1:exon
so has part: feature:692969-693069:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697660-697759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694584-694675:-1:exon

position:694584:-1
position: 694584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694675:-1
position: 694675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693200-693269:-1:exon

position:693200:-1
position: 693200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693269:-1
position: 693269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:692969-693069:-1:exon

position:692969:-1
position: 692969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693069:-1
position: 693069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:683456-684521:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040617220.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688452,688561..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694459,694584..694675))
location: region:683456-694675:-1
so has part: feature:694584-694675:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688561-688771:-1:exon
so has part: feature:688249-688452:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688561-688771:-1:exon

position:688561:-1
position: 688561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:688249-688452:-1:exon

position:688452:-1
position: 688452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:683456-684521:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_040617218.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694459,694584..694675))
location: region:683456-694675:-1
so has part: feature:694584-694675:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:683456-684521:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040617217.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688452,688561..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,692969..693069,693200..693269,694363..694459,694584..694675))
location: region:683456-694675:-1
so has part: feature:694584-694675:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:693200-693269:-1:exon
so has part: feature:692969-693069:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688561-688771:-1:exon
so has part: feature:688249-688452:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693200-693269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692969-693069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688561-688771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688249-688452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:683456-684521:-1:exon

SLC4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC4A1
product: solute carrier family 4 member 1 (Diego blood group), transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040617222.1
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(683456..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,693200..693262))
location: region:683456-693262:-1
so has part: feature:693200-693262:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:683456-684521:-1:exon

position:693262:-1
position: 693262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693200-693262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:683456-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X5
translation: MEVPGQELYEERMRRSLEPEGYEDIGIKGYRLSLGEMSAPSVTDVDVEAAGSRTLLSQQDTHEVYVELHELVMDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPWAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688452,688561..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694459,694584..694601))
location: region:684441-694601:-1
so has part: feature:694584-694601:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688561-688771:-1:exon
so has part: feature:688249-688452:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473154.1
type: Protein
SIO_000068: ncbiprotein

position:684441:-1
position: 684441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694601:-1
position: 694601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688561-688771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688249-688452:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:684441-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X3
translation: MEVPGQELYEERMRRSLEPEGYEDIGIKGYRLSLGEMSAPSVTDVDVEAAGSRTLLSQQDTHEVYVELHELVMDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPCMAGTTPAPPGSPFTMVGGDPTLHTGSPHGHLLVSPGAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694459,694584..694601))
location: region:684441-694601:-1
so has part: feature:694584-694601:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:684441-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X2
translation: MEVPGQELYEERMRRSLEPEGYEDIGIKGYRLSLGEMSGASTGTASPLHAWRARAEELTPLCQYLPGRRGYYDVDGRRRAAGAPPGQASHRGRGQPPSVTDVDVEAAGSRTLLSQQDTHEVYVELHELVMDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPWAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688452,688561..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,692969..693069,693200..693269,694363..694459,694584..694601))
location: region:684441-694601:-1
so has part: feature:694584-694601:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:693200-693269:-1:exon
so has part: feature:692969-693069:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688561-688771:-1:exon
so has part: feature:688249-688452:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693200-693269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692969-693069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688561-688771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688249-688452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:684441-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X1
translation: MEVPGQELYEERMRRSLEPEGYEDIGIKGYRLSLGEMSGASTGTASPLHAWRARAEELTPLCQYLPGRRGYYDVDGRRRAAGAPPGQASHRGRGQPPSVTDVDVEAAGSRTLLSQQDTHEVYVELHELVMDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPCMAGTTPAPPGSPFTMVGGDPTLHTGSPHGHLLVSPGAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,692969..693069,693200..693269,694363..694459,694584..694601))
location: region:684441-694601:-1
so has part: feature:694584-694601:-1:exon
so has part: feature:694363-694459:-1:exon
so has part: feature:693200-693269:-1:exon
so has part: feature:692969-693069:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694584-694601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694363-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693200-693269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692969-693069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:684441-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X4
translation: MRRSLEPEGYEDIGIKGYRLSLGEMSAPSVTDVDVEAAGSRTLLSQQDTHEVYVELHELVMDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPCMAGTTPAPPGSPFTMVGGDPTLHTGSPHGHLLVSPGAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691517,691709..691782,694363..694441))
location: region:684441-694441:-1
so has part: feature:694363-694441:-1:exon
so has part: feature:691709-691782:-1:exon
so has part: feature:691340-691517:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473153.1
type: Protein
SIO_000068: ncbiprotein

position:694441:-1
position: 694441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694363-694441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691709-691782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691340-691517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:684441-684521:-1:exon

SLC4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 3 anion transport protein isoform X6
translation: MDSTKELCWMEASHWLQLEEDFKEAGHWGQPHLSFLTYHSLLEVRRALAKGAVLVDVAAKSLAAIAHVLIDQMIYEGQIKPQDQEAILRMMLLKHKHPDEVESVGTLLRAQLQRSGTGQAETEQPLLQQPLEMRRLPGAKQSPSGATKPQLPEKVPKDAEATLVLVGCAAFLEQPTLAFVRLKDAVMLDAVLDVPLPVRFLFVVLGPDSPHISYHEIGRAVATMMSERVFRRDAYLAEGRQDLLQGVEDFLEASIVLPPTETPNEQLLRSLVPLQQDLLRRRYQPRKKALPKDVPKGPCMAGTTPAPPGSPFTMVGGDPTLHTGSPHGHLLVSPGAEAPPAEDDDPLRRTGKPFGGLVRDICRRYPKYLSDIKDAFSPQCLAAIIFIYFAALSPAITFGGLLSEKTEGMMGVSELLISTCVQCVLFSFFSAQPLLVVGFSGPLLVFEEAFYSFCSNNGIEYIVGRVWIGFWMILLVLLVVACEGSFLVRYLSRYTQEIFSFLISLIFIYETFSKLVTIFQNHPLQRHYNVQATVQPHVPEPNTALLSLVLMAGTFFLAFFLRKFKNSSFLPGKVRRLIGDFGVPISIFVMALVDFFIKDTYTQKLKVPKGLEVTNASARSWFIHPLGNNSPFPIWMMFATVVPALLVFILIFLETQITTLIVSKPERKLVKGSGFHLDLLLIVVMGGLAALFGMPWLSATTVRTITHANALTVMSKTSAASEKAQILEVKEQRVSGFFVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPKEPYVTRVKTLRMHLFTVTQIIVLVLLWVVKSTPASLALPFVLILTVPLRRLLLPKIFHEVELKCLDADDAVVTFEEEEGTDVYDEVQMPS
SIO_010081: SLC4A1
subclass of: SO_0000673
so part of: SLC4A1
location: complement(join(684441..684521,684671..684844,685049..685218,685304..685557,685661..685827,685955..686044,686273..686440,687185..687379,687880..688028,688249..688771,689312..689496,690073..690148,690767..690902,691128..691263,691340..691490))
location: region:684441-691490:-1
so has part: feature:691340-691490:-1:exon
so has part: feature:691128-691263:-1:exon
so has part: feature:690767-690902:-1:exon
so has part: feature:690073-690148:-1:exon
so has part: feature:689312-689496:-1:exon
so has part: feature:688249-688771:-1:exon
so has part: feature:687880-688028:-1:exon
so has part: feature:687185-687379:-1:exon
so has part: feature:686273-686440:-1:exon
so has part: feature:685955-686044:-1:exon
so has part: feature:685661-685827:-1:exon
so has part: feature:685304-685557:-1:exon
so has part: feature:685049-685218:-1:exon
so has part: feature:684671-684844:-1:exon
so has part: feature:684441-684521:-1:exon

XP_040473156.1
type: Protein
SIO_000068: ncbiprotein

position:691490:-1
position: 691490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691340-691490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691128-691263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690767-690902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690073-690148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689312-689496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688249-688771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:687880-688028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:687185-687379:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686273-686440:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685955-686044:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685661-685827:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685304-685557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685049-685218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:684671-684844:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684441-684521:-1:exon

RUNDC3A
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699551..705406
location: region:699551-705406:1
so has part: feature:699551-705406:1:exon
subclass of: SO_0000010

121098826
type: Gene
SIO_000068: ncbigene

position:699551:1
position: 699551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705406:1
position: 705406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699551-705406:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617227.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,705086..705406)
location: region:699551-705406:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:705086-705406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

position:699680:1
position: 699680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

position:701981:1
position: 701981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702096:1
position: 702096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

position:702298:1
position: 702298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702431:1
position: 702431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

position:702949:1
position: 702949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703034:1
position: 703034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

position:703176:1
position: 703176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703268:1
position: 703268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

position:703362:1
position: 703362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703442:1
position: 703442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

position:703548:1
position: 703548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703713:1
position: 703713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

position:703916:1
position: 703916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704073:1
position: 704073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

position:704429:1
position: 704429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704566:1
position: 704566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:705086-705406:1:exon

position:705086:1
position: 705086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617223.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,704693..704844,705086..705346)
location: region:699551-705346:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704693-704844:1:exon
so has part: feature:705086-705346:1:exon

position:705346:1
position: 705346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704693-704844:1:exon

position:704693:1
position: 704693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704844:1
position: 704844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705346:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040617225.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,704738..704844,705086..705346)
location: region:699551-705346:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704738-704844:1:exon
so has part: feature:705086-705346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704738-704844:1:exon

position:704738:1
position: 704738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705346:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617224.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703265,703362..703442,703548..703713,703916..704073,704429..704566,704693..704844,705086..705346)
location: region:699551-705346:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703265:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704693-704844:1:exon
so has part: feature:705086-705346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703265:1:exon

position:703265:1
position: 703265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704693-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705346:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040617226.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703265,703362..703442,703548..703713,703916..704073,704429..704566,704738..704844,705086..705346)
location: region:699551-705346:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703265:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704738-704844:1:exon
so has part: feature:705086-705346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704738-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705346:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617229.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704566,705086..705193)
location: region:699551-705193:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704566:1:exon
so has part: feature:705086-705193:1:exon

position:705193:1
position: 705193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704566:1:exon

position:704377:1
position: 704377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:705086-705193:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617228.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704566,704738..704843)
location: region:699551-704843:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704566:1:exon
so has part: feature:704738-704843:1:exon

position:704843:1
position: 704843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704738-704843:1:exon

RUNDC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RUNDC3A
product: RUN domain containing 3A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617230.1
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699551..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704566,704693..704805)
location: region:699551-704805:1
so has part: feature:699551-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704566:1:exon
so has part: feature:704693-704805:1:exon

position:704805:1
position: 704805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699551-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704693-704805:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X5
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESSSDSKLYRREGPHALHAGALRLPGLPAQLQVPGQPQVQRVPGERQHRSQPDPQPQLRPPAPSPPPSLAARPSVVAED
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,705086..705293)
location: region:699604-705293:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:705086-705293:1:exon

XP_040473161.1
type: Protein
SIO_000068: ncbiprotein

position:699604:1
position: 699604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705293:1
position: 705293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705086-705293:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X1
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESSSDSKLYRSPGGCGAGGSAPSVRRHSFVSTDQLSAENSLSSDSQRLGEGKREGEPWGPLGKDPTPSMLGLCGSLASLPSCKSLASLKSNECLVSDSTEASPTRSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,704693..704844,705086..705228)
location: region:699604-705228:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704693-704844:1:exon
so has part: feature:705086-705228:1:exon

XP_040473157.1
type: Protein
SIO_000068: ncbiprotein

position:705228:1
position: 705228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704693-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705228:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X3
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESSSDSKLYRRHSFVSTDQLSAENSLSSDSQRLGEGKREGEPWGPLGKDPTPSMLGLCGSLASLPSCKSLASLKSNECLVSDSTEASPTRSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704429..704566,704738..704844,705086..705228)
location: region:699604-705228:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704738-704844:1:exon
so has part: feature:705086-705228:1:exon

XP_040473159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704738-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705228:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X2
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFSFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESSSDSKLYRSPGGCGAGGSAPSVRRHSFVSTDQLSAENSLSSDSQRLGEGKREGEPWGPLGKDPTPSMLGLCGSLASLPSCKSLASLKSNECLVSDSTEASPTRSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703265,703362..703442,703548..703713,703916..704073,704429..704566,704693..704844,705086..705228)
location: region:699604-705228:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703265:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704693-704844:1:exon
so has part: feature:705086-705228:1:exon

XP_040473158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704693-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705228:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X4
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFSFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLTGLIPCENPQLAQLSKEMVTPLVNQWPSLGTLNGNESSSDSKLYRRHSFVSTDQLSAENSLSSDSQRLGEGKREGEPWGPLGKDPTPSMLGLCGSLASLPSCKSLASLKSNECLVSDSTEASPTRSPS
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703265,703362..703442,703548..703713,703916..704073,704429..704566,704738..704844,705086..705228)
location: region:699604-705228:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703265:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704429-704566:1:exon
so has part: feature:704738-704844:1:exon
so has part: feature:705086-705228:1:exon

XP_040473160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704429-704566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704738-704844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705086-705228:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X6
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLSPALVAVPGAEHPPLPQDGADPLREPAAGPALQGDGDTLGEPVAIAGDPQRQ
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704536)
location: region:699604-704536:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704536:1:exon

XP_040473162.1
type: Protein
SIO_000068: ncbiprotein

position:704536:1
position: 704536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704536:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X6
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLSPALVAVPGAEHPPLPQDGADPLREPAAGPALQGDGDTLGEPVAIAGDPQRQ
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704536)
location: region:699604-704536:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704536:1:exon

XP_040473163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704536:1:exon

RUNDC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RUNDC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 3A isoform X6
translation: MALGLAKKGSSRNIAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTSRAKGRAWIRVALMEKRMSEYISTALRDTRTTRRFYDDGAIMLREESTVLTGMLIGLSAIDFRYFCLKGEVMDGKTPVVIDYTPYLKFTQSYDYLSEEEERGSVESSTSEDSSPEHPYLPLVTDEDSWYNKWRKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENKRLKLRLEEVMVQNQLEKRELEGVILELQEQLSPALVAVPGAEHPPLPQDGADPLREPAAGPALQGDGDTLGEPVAIAGDPQRQ
SIO_010081: RUNDC3A
subclass of: SO_0000673
so part of: RUNDC3A
location: join(699604..699680,701981..702096,702298..702431,702949..703034,703176..703268,703362..703442,703548..703713,703916..704073,704377..704536)
location: region:699604-704536:1
so has part: feature:699604-699680:1:exon
so has part: feature:701981-702096:1:exon
so has part: feature:702298-702431:1:exon
so has part: feature:702949-703034:1:exon
so has part: feature:703176-703268:1:exon
so has part: feature:703362-703442:1:exon
so has part: feature:703548-703713:1:exon
so has part: feature:703916-704073:1:exon
so has part: feature:704377-704536:1:exon

XP_040473164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701981-702096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702298-702431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:702949-703034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703176-703268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703362-703442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703548-703713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703916-704073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704377-704536:1:exon

SLC25A39
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(706263..712756)
location: region:706263-712756:-1
so has part: feature:706263-712756:-1:exon
subclass of: SO_0000010

121098827
type: Gene
SIO_000068: ncbigene

position:706263:-1
position: 706263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712756:-1
position: 712756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706263-712756:-1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617233.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(706263..707145,707230..707310,707404..707485,707648..707757,707903..708076,708248..708372,708504..708571,708690..708799,709521..709565,710238..710297,710373..710481,712617..712756))
location: region:706263-712756:-1
so has part: feature:712617-712756:-1:exon
so has part: feature:710373-710481:-1:exon
so has part: feature:710238-710297:-1:exon
so has part: feature:709521-709565:-1:exon
so has part: feature:708690-708799:-1:exon
so has part: feature:708504-708571:-1:exon
so has part: feature:708248-708372:-1:exon
so has part: feature:707903-708076:-1:exon
so has part: feature:707648-707757:-1:exon
so has part: feature:707404-707485:-1:exon
so has part: feature:707230-707310:-1:exon
so has part: feature:706263-707145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:712617-712756:-1:exon

position:712617:-1
position: 712617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710373-710481:-1:exon

position:710373:-1
position: 710373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710481:-1
position: 710481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710238-710297:-1:exon

position:710238:-1
position: 710238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710297:-1
position: 710297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709521-709565:-1:exon

position:709521:-1
position: 709521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709565:-1
position: 709565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:708690-708799:-1:exon

position:708690:-1
position: 708690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708799:-1
position: 708799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:708504-708571:-1:exon

position:708504:-1
position: 708504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708571:-1
position: 708571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:708248-708372:-1:exon

position:708248:-1
position: 708248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708372:-1
position: 708372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707903-708076:-1:exon

position:707903:-1
position: 707903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708076:-1
position: 708076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:707648-707757:-1:exon

position:707648:-1
position: 707648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707757:-1
position: 707757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:707404-707485:-1:exon

position:707404:-1
position: 707404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707485:-1
position: 707485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:707230-707310:-1:exon

position:707230:-1
position: 707230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707310:-1
position: 707310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706263-707145:-1:exon

position:707145:-1
position: 707145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617232.1
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(706263..707145,707230..707310,707404..707485,707648..707757,707903..708076,708248..708372,708504..708571,708690..708799,710238..710297,710373..710481,712617..712724))
location: region:706263-712724:-1
so has part: feature:712617-712724:-1:exon
so has part: feature:710373-710481:-1:exon
so has part: feature:710238-710297:-1:exon
so has part: feature:708690-708799:-1:exon
so has part: feature:708504-708571:-1:exon
so has part: feature:708248-708372:-1:exon
so has part: feature:707903-708076:-1:exon
so has part: feature:707648-707757:-1:exon
so has part: feature:707404-707485:-1:exon
so has part: feature:707230-707310:-1:exon
so has part: feature:706263-707145:-1:exon

position:712724:-1
position: 712724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712617-712724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710373-710481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710238-710297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708690-708799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708504-708571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708248-708372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707903-708076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707648-707757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707404-707485:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:707230-707310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706263-707145:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X1
translation: MAEKTSPSPCGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQRTPFAKGKCFLYCNGLMDHLYVCQNGNSCTAWYKTPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLHARTGSRGHHIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELGVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVKEWLCRQACLDEATFMISFASGAVSGTVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFFQKLNQERRLRTL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(707027..707145,707230..707310,707404..707485,707648..707757,707903..708076,708248..708372,708504..708571,708690..708799,710238..710297,710373..710469))
location: region:707027-710469:-1
so has part: feature:710373-710469:-1:exon
so has part: feature:710238-710297:-1:exon
so has part: feature:708690-708799:-1:exon
so has part: feature:708504-708571:-1:exon
so has part: feature:708248-708372:-1:exon
so has part: feature:707903-708076:-1:exon
so has part: feature:707648-707757:-1:exon
so has part: feature:707404-707485:-1:exon
so has part: feature:707230-707310:-1:exon
so has part: feature:707027-707145:-1:exon

XP_040473166.1
type: Protein
SIO_000068: ncbiprotein

position:707027:-1
position: 707027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710469:-1
position: 710469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710373-710469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710238-710297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708690-708799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708504-708571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708248-708372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707903-708076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707648-707757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707404-707485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707230-707310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:707027-707145:-1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X2
translation: MAEKTSPSPCGGITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQRTPFAKALPVRSVPWGTQQATWKCFLYCNGLMDHLYVCQNGNSCTAWYKTPTHFTGTLDAFVKITRYEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLHARTGSRGHHIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRELGVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVKEWLCRQACLDEATFMISFASGAVSGTVAAVLTLPFDVVKTQRQIELGDSEVHPVAASKPSSTWLLMQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFFQKLNQERRLRTL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: complement(join(707027..707145,707230..707310,707404..707485,707648..707757,707903..708076,708248..708372,708504..708571,708690..708799,709521..709565,710238..710297,710373..710469))
location: region:707027-710469:-1
so has part: feature:710373-710469:-1:exon
so has part: feature:710238-710297:-1:exon
so has part: feature:709521-709565:-1:exon
so has part: feature:708690-708799:-1:exon
so has part: feature:708504-708571:-1:exon
so has part: feature:708248-708372:-1:exon
so has part: feature:707903-708076:-1:exon
so has part: feature:707648-707757:-1:exon
so has part: feature:707404-707485:-1:exon
so has part: feature:707230-707310:-1:exon
so has part: feature:707027-707145:-1:exon

XP_040473167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710373-710469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710238-710297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709521-709565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708690-708799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708504-708571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708248-708372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707903-708076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707648-707757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707404-707485:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:707230-707310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707027-707145:-1:exon

MAPT
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: MAPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719918..772909
location: region:719918-772909:1
so has part: feature:719918-772909:1:exon
subclass of: SO_0000010

121099018
type: Gene
SIO_000068: ncbigene

position:719918:1
position: 719918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772909:1
position: 772909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719918-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617614.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

position:720022:1
position: 720022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

position:743552:1
position: 743552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743640:1
position: 743640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

position:744989:1
position: 744989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745075:1
position: 745075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

position:746462:1
position: 746462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746548:1
position: 746548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

position:748403:1
position: 748403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748468:1
position: 748468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

position:755057:1
position: 755057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755112:1
position: 755112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

position:756217:1
position: 756217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756396:1
position: 756396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

position:757409:1
position: 757409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757541:1
position: 757541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

position:758164:1
position: 758164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758214:1
position: 758214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

position:758666:1
position: 758666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758931:1
position: 758931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

position:762270:1
position: 762270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762362:1
position: 762362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

position:762510:1
position: 762510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762602:1
position: 762602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:766264-766345:1:exon

position:766264:1
position: 766264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766345:1
position: 766345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:766940-767052:1:exon

position:766940:1
position: 766940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767052:1
position: 767052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:769794-772909:1:exon

position:769794:1
position: 769794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617618.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617622.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617619.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758768..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758768-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758768-758931:1:exon

position:758768:1
position: 758768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617625.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758768..758931,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758768-758931:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758768-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617621.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617623.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,757409..757541,758164..758214,758666..758931,762270..762362,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617626.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,757409..757541,758164..758214,758666..758931,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617627.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,757409..757541,758164..758214,758768..758931,762270..762362,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758768-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758768-758931:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617620.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617629.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,748403..748468,755057..755112,757409..757541,758164..758214,758666..758931,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617630.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,748403..748468,755057..755112,757409..757541,758164..758214,758768..758931,762270..762362,766264..766345,766940..767052,769794..772909)
location: region:719918-772909:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758768-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758768-758931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_040617617.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769151..769298,769794..770043)
location: region:719918-770043:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769151-769298:1:exon
so has part: feature:769794-770043:1:exon

position:770043:1
position: 770043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769151-769298:1:exon

position:769151:1
position: 769151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769298:1
position: 769298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:769794-770043:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_040617628.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(719918..720022,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,765859..765897,766264..766345)
location: region:719918-766345:1
so has part: feature:719918-720022:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:765859-765897:1:exon
so has part: feature:766264-766345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719918-720022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:765859-765897:1:exon

position:765859:1
position: 765859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765897:1
position: 765897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:766264-766345:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617615.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(720109..720311,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:720109-772909:1
so has part: feature:720109-720311:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

position:720109:1
position: 720109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720109-720311:1:exon

position:720311:1
position: 720311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MAPT
product: microtubule associated protein tau, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040617616.1
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(736600..736728,743552..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..772909)
location: region:736600-772909:1
so has part: feature:736600-736728:1:exon
so has part: feature:743552-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-772909:1:exon

position:736600:1
position: 736600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736600-736728:1:exon

position:736728:1
position: 736728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743552-743640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744989-745075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746462-746548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748403-748468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755057-755112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756217-756396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758164-758214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758666-758931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:762270-762362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762510-762602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:766264-766345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766940-767052:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769794-772909:1:exon

MAPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MAPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau isoform X1
translation: MAEQRQDVTMMEDHAAGQEKHIPSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDHEDQGGVEQHGEIPEGTTAEEAGVGATPNLEDHAAGDAAQGRIDGKEKEGTEAEEKKPKKSSPSTAKPPGDRPSIPPQQHTSSSTIPSKTPSSPASTSKRVSSVTSRPAGTGMQETKVKGPEMRGGTKTATPRSAAGQAQRNSTNATRIPAKTPTAPKTPPSSGRKEQKKPPPAAAKSEKGEQPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKSRIQPSAAPMPDLKNVKSKIGSTENLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVNKKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINMVDSPQLATLADEVSASLAKQGL
SIO_010081: MAPT
subclass of: SO_0000673
so part of: MAPT
location: join(743568..743640,744989..745075,746462..746548,748403..748468,755057..755112,756217..756396,757409..757541,758164..758214,758666..758931,762270..762362,762510..762602,766264..766345,766940..767052,769794..770009)
location: region:743568-770009:1
so has part: feature:743568-743640:1:exon
so has part: feature:744989-745075:1:exon
so has part: feature:746462-746548:1:exon
so has part: feature:748403-748468:1:exon
so has part: feature:755057-755112:1:exon
so has part: feature:756217-756396:1:exon
so has part: feature:757409-757541:1:exon
so has part: feature:758164-758214:1:exon
so has part: feature:758666-758931:1:exon
so has part: feature:762270-762362:1:exon
so has part: feature:762510-762602:1:exon
so has part: feature:766264-766345:1:exon
so has part: feature:766940-767052:1:exon
so has part: feature:769794-770009:1:exon

XP_040473548.1
type: Protein
SIO_000068: ncbiprotein

position:743568:1
position: 743568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770009:1
position: 770009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743568-743640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744989-745075:1:exon