Falco naumanni isolate bFalNau1 chromosome 17, bFalNau1.pat, whole genome shotgun sequence.
type: Entry
definition: Falco naumanni isolate bFalNau1 chromosome 17, bFalNau1.pat, whole genome shotgun sequence.
sequence version: NC_054070.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_054070.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA719130
dblink: SAMN16870685
keyword: WGS
keyword: RefSeq
source: Falco naumanni (lesser kestrel)
organism: Falco naumanni
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030161.1.\nAssembly name: bFalNau1.pat\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGFVS000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; pbgcpp\n v. 1.9.0; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-14; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bFalNau1.pat\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 104.34x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Falco naumanni Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7799962
topology: linear
so has quality: SO_0000987
location: 1..7799962
location: region:1-7799962:1
RO_0002162: 148594

NC_054070
type: RefSeq
SIO_000068: refseq

PRJNA719130
type: BioProject
SIO_000068: bioproject

SAMN16870685
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7799962:1
position: 7799962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7799962:1:source
so part of: sequence
organism: Falco naumanni
mol type: genomic DNA
isolate: bFalNau1
specimen voucher: P51P2 - H187058 (nest 2016-P51)
chromosome: 17
sex: female
tissue type: blood
dev stage: juvenile
country: Italy: Matera
lat lon: 40.67 N 16.60 E
collection date: 2016-06-25
collected by: Diego Rubolini

148594
type: Taxonomy
SIO_000068: taxonomy

LOC121098472
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2233..6253
location: region:2233-6253:1
so has part: feature:2233-6253:1:exon
subclass of: SO_0000010

121098472
type: Gene
SIO_000068: ncbigene

position:2233:1
position: 2233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6253:1
position: 6253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2233-6253:1:exon

LOC121098472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098472
product: translin-associated factor X-interacting protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040616469.1
SIO_010081: LOC121098472
subclass of: SO_0000673
so part of: LOC121098472
location: join(2233..2741,4102..4208,6037..6253)
location: region:2233-6253:1
so has part: feature:2233-2741:1:exon
so has part: feature:4102-4208:1:exon
so has part: feature:6037-6253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2233-2741:1:exon

position:2741:1
position: 2741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4102-4208:1:exon

position:4102:1
position: 4102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208:1
position: 4208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6037-6253:1:exon

position:6037:1
position: 6037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated factor X-interacting protein 1-like
translation: MCGHILLAAQCLFAVAEVIPGGADQWGSLAEGKTSSQLVDVLLEEIATGALRERNGFPAREEEGSAEAFVAKPRSQDVREKQEYLSQLKNKLGDLLEGKADDLKTAFCAIDPSIDDQTLDTYIGLPDQEDVPVETALERLLAGYARQVGPSPREGSTTGFGGEEGDF
SIO_010081: LOC121098472
subclass of: SO_0000673
so part of: LOC121098472
location: join(2562..2741,4102..4208,6037..6253)
location: region:2562-6253:1
so has part: feature:2562-2741:1:exon
so has part: feature:4102-4208:1:exon
so has part: feature:6037-6253:1:exon

XP_040472403.1
type: Protein
SIO_000068: ncbiprotein

position:2562:1
position: 2562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2562-2741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4102-4208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6037-6253:1:exon

LOC121098461
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9066..23547
location: region:9066-23547:1
so has part: feature:9066-23547:1:exon
subclass of: SO_0000010

121098461
type: Gene
SIO_000068: ncbigene

position:9066:1
position: 9066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23547:1
position: 23547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9066-23547:1:exon

LOC121098461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098461
product: uncharacterized LOC121098461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616451.1
SIO_010081: LOC121098461
subclass of: SO_0000673
so part of: LOC121098461
location: join(9066..9108,10475..10605,11967..12073,18009..18130,20125..20202,20337..20633,22105..22404,22741..22842,23252..23547)
location: region:9066-23547:1
so has part: feature:9066-9108:1:exon
so has part: feature:10475-10605:1:exon
so has part: feature:11967-12073:1:exon
so has part: feature:18009-18130:1:exon
so has part: feature:20125-20202:1:exon
so has part: feature:20337-20633:1:exon
so has part: feature:22105-22404:1:exon
so has part: feature:22741-22842:1:exon
so has part: feature:23252-23547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9066-9108:1:exon

position:9108:1
position: 9108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10475-10605:1:exon

position:10475:1
position: 10475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10605:1
position: 10605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11967-12073:1:exon

position:11967:1
position: 11967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12073:1
position: 12073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18009-18130:1:exon

position:18009:1
position: 18009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18130:1
position: 18130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20125-20202:1:exon

position:20125:1
position: 20125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20202:1
position: 20202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20337-20633:1:exon

position:20337:1
position: 20337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20633:1
position: 20633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22105-22404:1:exon

position:22105:1
position: 22105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22404:1
position: 22404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22741-22842:1:exon

position:22741:1
position: 22741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22842:1
position: 22842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:23252-23547:1:exon

position:23252:1
position: 23252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121098461
translation: MTVHLLVILLTSPLLSFQWPSLTALLHLLPLAVSSADLLPVPTLSTDPSYHFYYEGEHLAIICLAATQRKIGGFRFFNQSGEQIDLRAPYPLPFAWLQLKATTASAGTYTCMYFVEDSGQEIPSNRSLPLSIKVQTAPVAPTLSLDPQQQVYVSGNSVKLLCSIPSSPDNVREVQYYADFGFAVSIPVSNVKNYSYDLKITGEDVSGSYSCAYFVMKSMRPVRSERSRWINVNVKSYKIGWIREIIVGGSFFTINGLIFFFSHCLMKRTGVQH
SIO_010081: LOC121098461
subclass of: SO_0000673
so part of: LOC121098461
location: join(18100..18130,20125..20202,20337..20633,22105..22404,22741..22842,23252..23265)
location: region:18100-23265:1
so has part: feature:18100-18130:1:exon
so has part: feature:20125-20202:1:exon
so has part: feature:20337-20633:1:exon
so has part: feature:22105-22404:1:exon
so has part: feature:22741-22842:1:exon
so has part: feature:23252-23265:1:exon

XP_040472385.1
type: Protein
SIO_000068: ncbiprotein

position:18100:1
position: 18100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23265:1
position: 23265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18100-18130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20125-20202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20337-20633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22105-22404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22741-22842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23252-23265:1:exon

NGF
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78514..112498
location: region:78514-112498:1
so has part: feature:78514-112498:1:exon
subclass of: SO_0000010

121098460
type: Gene
SIO_000068: ncbigene

position:78514:1
position: 78514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112498:1
position: 112498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78514-112498:1:exon

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NGF
product: nerve growth factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040616448.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(78514..79198,108201..108341,111621..112498)
location: region:78514-112498:1
so has part: feature:78514-79198:1:exon
so has part: feature:108201-108341:1:exon
so has part: feature:111621-112498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78514-79198:1:exon

position:79198:1
position: 79198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108201-108341:1:exon

position:108201:1
position: 108201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108341:1
position: 108341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111621-112498:1:exon

position:111621:1
position: 111621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NGF
product: nerve growth factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040616449.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(99281..108341,111621..112498)
location: region:99281-112498:1
so has part: feature:99281-108341:1:exon
so has part: feature:111621-112498:1:exon

position:99281:1
position: 99281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99281-108341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111621-112498:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor
translation: MSMLYYTLIIAFLIGTQAAPKTEGNAPLEYPAEHSLLNTHRSNRHHIPQAAPQTSHSHSTWTIGRKEAINITMDPKLFKKRRFHSPRVLFSTQRPPVSGQGQNLGFLSSAGSLNRTARTKRTTHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNVFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 111633..112352
location: region:111633-112352:1
so has part: feature:111633-112352:1:exon

XP_040472382.1
type: Protein
SIO_000068: ncbiprotein

position:111633:1
position: 111633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112352:1
position: 112352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111633-112352:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor
translation: MSMLYYTLIIAFLIGTQAAPKTEGNAPLEYPAEHSLLNTHRSNRHHIPQAAPQTSHSHSTWTIGRKEAINITMDPKLFKKRRFHSPRVLFSTQRPPVSGQGQNLGFLSSAGSLNRTARTKRTTHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNVFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 111633..112352
location: region:111633-112352:1
so has part: feature:111633-112352:1:exon

XP_040472383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111633-112352:1:exon

TSPAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151915..176760
location: region:151915-176760:1
so has part: feature:151915-176760:1:exon
subclass of: SO_0000010

121098459
type: Gene
SIO_000068: ncbigene

position:151915:1
position: 151915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176760:1
position: 176760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151915-176760:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSPAN2
product: tetraspanin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040616443.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(151915..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,173005..176760)
location: region:151915-176760:1
so has part: feature:151915-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:173005-176760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151915-152087:1:exon

position:152087:1
position: 152087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

position:154588:1
position: 154588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154690:1
position: 154690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

position:166931:1
position: 166931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167028:1
position: 167028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

position:167479:1
position: 167479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167553:1
position: 167553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

position:168087:1
position: 168087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168188:1
position: 168188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

position:169389:1
position: 169389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169463:1
position: 169463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

position:170199:1
position: 170199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170282:1
position: 170282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:173005-176760:1:exon

position:173005:1
position: 173005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSPAN2
product: tetraspanin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616446.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(151915..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,176480..176760)
location: region:151915-176760:1
so has part: feature:151915-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:176480-176760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151915-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176480-176760:1:exon

position:176480:1
position: 176480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSPAN2
product: tetraspanin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040616447.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(151915..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,176536..176760)
location: region:151915-176760:1
so has part: feature:151915-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:176536-176760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151915-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176536-176760:1:exon

position:176536:1
position: 176536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSPAN2
product: tetraspanin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040616442.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(151915..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,170918..173116)
location: region:151915-173116:1
so has part: feature:151915-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:170918-173116:1:exon

position:173116:1
position: 173116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151915-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170918-173116:1:exon

position:170918:1
position: 170918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSPAN2
product: tetraspanin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616444.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(151915..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,172216..173116)
location: region:151915-173116:1
so has part: feature:151915-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:172216-173116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151915-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172216-173116:1:exon

position:172216:1
position: 172216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X5
translation: MGTGRGGMRCIKILLCIFNLTFWLAGLAVIAFGLWLRFGGVMADFASEKKSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEAQKIYEDIYDDYMKNPGGEVNRTIFRYHLALQCCGKDNMEQQMGLPCPENIQMPKNCLIEIQNVIDANLHLIGIVGIAIAGITHKF
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(152019..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,176536..176547)
location: region:152019-176547:1
so has part: feature:152019-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:176536-176547:1:exon

XP_040472381.1
type: Protein
SIO_000068: ncbiprotein

position:152019:1
position: 152019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176547:1
position: 176547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152019-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176536-176547:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X4
translation: MGTGRGGMRCIKILLCIFNLTFWLAGLAVIAFGLWLRFGGVMADFASEKKSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEAQKIYEDIYDDYMKNPGGEVNRTIFRYHLALQCCGKDNMEQQMGLPCPENIQMPKNCLIEIQNVIDANLHLIGIVGIAIAGITPLGSPQHKPLPM
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(152019..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,176480..176518)
location: region:152019-176518:1
so has part: feature:152019-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:176480-176518:1:exon

XP_040472380.1
type: Protein
SIO_000068: ncbiprotein

position:176518:1
position: 176518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152019-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176480-176518:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X2
translation: MGTGRGGMRCIKILLCIFNLTFWLAGLAVIAFGLWLRFGGVMADFASEKKSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEAQKIYEDIYDDYMKNPGGEVNRTIFRYHLALQCCGKDNMEQQMGLPCPENIQMPKNCLIEIQNVIDANLHLIGIVGIAIAGITDWTLHANTESSGGGNMSNEIQAKGREGKRWEAGKIMQSFGSNCSAKCA
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(152019..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,173005..173151)
location: region:152019-173151:1
so has part: feature:152019-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:173005-173151:1:exon

XP_040472377.1
type: Protein
SIO_000068: ncbiprotein

position:173151:1
position: 173151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152019-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:173005-173151:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X3
translation: MGTGRGGMRCIKILLCIFNLTFWLAGLAVIAFGLWLRFGGVMADFASEKKSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEAQKIYEDIYDDYMKNPGGEVNRTIFRYHLALQCCGKDNMEQQMGLPCPENIQMPKNCLIEIQNVIDANLHLIGIVGIAIAGITIFGMIFSMVLCCVIRNTRDMI
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(152019..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,172216..172281)
location: region:152019-172281:1
so has part: feature:152019-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:172216-172281:1:exon

XP_040472378.1
type: Protein
SIO_000068: ncbiprotein

position:172281:1
position: 172281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152019-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172216-172281:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X1
translation: MGTGRGGMRCIKILLCIFNLTFWLAGLAVIAFGLWLRFGGVMADFASEKKSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEAQKIYEDIYDDYMKNPGGEVNRTIFRYHLALQCCGKDNMEQQMGLPCPENIQMPKNCLIEIQNVIDANLHLIGIVGIAIAGITPTFSLKCVWYSRGLLLHDRAVTNRCHPAARMCRNGQSVSSAGSTSQQASTTTSFRLRNQQQSEAA
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(152019..152087,154588..154690,166931..167028,167479..167553,168087..168188,169389..169463,170199..170282,170918..171115)
location: region:152019-171115:1
so has part: feature:152019-152087:1:exon
so has part: feature:154588-154690:1:exon
so has part: feature:166931-167028:1:exon
so has part: feature:167479-167553:1:exon
so has part: feature:168087-168188:1:exon
so has part: feature:169389-169463:1:exon
so has part: feature:170199-170282:1:exon
so has part: feature:170918-171115:1:exon

XP_040472376.1
type: Protein
SIO_000068: ncbiprotein

position:171115:1
position: 171115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152019-152087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154588-154690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166931-167028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167479-167553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168087-168188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169389-169463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170199-170282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170918-171115:1:exon

TSHB
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182718..191022)
location: region:182718-191022:-1
so has part: feature:182718-191022:-1:exon
subclass of: SO_0000010

121098464
type: Gene
SIO_000068: ncbigene

position:182718:-1
position: 182718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191022:-1
position: 191022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182718-191022:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TSHB
product: thyroid stimulating hormone subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616456.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(182718..182995,183725..191022))
location: region:182718-191022:-1
so has part: feature:183725-191022:-1:exon
so has part: feature:182718-182995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183725-191022:-1:exon

position:183725:-1
position: 183725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182718-182995:-1:exon

position:182995:-1
position: 182995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta
translation: MSPFFVMSLLFGLTVGQTASLCAPSEYIIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAVSCKCGKCNTDYSDCVHEKVRTNYCTKPQKLRNM
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(182753..182995,183725..183886))
location: region:182753-183886:-1
so has part: feature:183725-183886:-1:exon
so has part: feature:182753-182995:-1:exon

XP_040472390.1
type: Protein
SIO_000068: ncbiprotein

position:182753:-1
position: 182753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183886:-1
position: 183886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182753-182995:-1:exon

SYCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(191107..216050)
location: region:191107-216050:-1
so has part: feature:191107-216050:-1:exon
subclass of: SO_0000010

121098463
type: Gene
SIO_000068: ncbigene

position:191107:-1
position: 191107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216050:-1
position: 216050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191107-216050:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SYCP1
product: synaptonemal complex protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616455.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(191107..191906,191992..192078,192439..192582,193594..193770,193913..193972,194588..194662,195580..195672,196348..196458,197077..197193,198329..198391,199080..199142,199490..199552,200011..200092,200761..200831,201076..201193,201682..201785,202750..202854,203985..204046,205187..205254,206154..206338,206476..206570,207766..207874,208812..208885,209493..209562,210713..210771,212055..212128,212317..212384,213228..213392,214638..214684,214849..214933,215943..216050))
location: region:191107-216050:-1
so has part: feature:215943-216050:-1:exon
so has part: feature:214849-214933:-1:exon
so has part: feature:214638-214684:-1:exon
so has part: feature:213228-213392:-1:exon
so has part: feature:212317-212384:-1:exon
so has part: feature:212055-212128:-1:exon
so has part: feature:210713-210771:-1:exon
so has part: feature:209493-209562:-1:exon
so has part: feature:208812-208885:-1:exon
so has part: feature:207766-207874:-1:exon
so has part: feature:206476-206570:-1:exon
so has part: feature:206154-206338:-1:exon
so has part: feature:205187-205254:-1:exon
so has part: feature:203985-204046:-1:exon
so has part: feature:202750-202854:-1:exon
so has part: feature:201682-201785:-1:exon
so has part: feature:201076-201193:-1:exon
so has part: feature:200761-200831:-1:exon
so has part: feature:200011-200092:-1:exon
so has part: feature:199490-199552:-1:exon
so has part: feature:199080-199142:-1:exon
so has part: feature:198329-198391:-1:exon
so has part: feature:197077-197193:-1:exon
so has part: feature:196348-196458:-1:exon
so has part: feature:195580-195672:-1:exon
so has part: feature:194588-194662:-1:exon
so has part: feature:193913-193972:-1:exon
so has part: feature:193594-193770:-1:exon
so has part: feature:192439-192582:-1:exon
so has part: feature:191992-192078:-1:exon
so has part: feature:191107-191906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215943-216050:-1:exon

position:215943:-1
position: 215943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214849-214933:-1:exon

position:214849:-1
position: 214849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214933:-1
position: 214933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214638-214684:-1:exon

position:214638:-1
position: 214638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214684:-1
position: 214684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213228-213392:-1:exon

position:213228:-1
position: 213228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213392:-1
position: 213392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212317-212384:-1:exon

position:212317:-1
position: 212317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212384:-1
position: 212384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212055-212128:-1:exon

position:212055:-1
position: 212055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212128:-1
position: 212128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:210713-210771:-1:exon

position:210713:-1
position: 210713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210771:-1
position: 210771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209493-209562:-1:exon

position:209493:-1
position: 209493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209562:-1
position: 209562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208812-208885:-1:exon

position:208812:-1
position: 208812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208885:-1
position: 208885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:207766-207874:-1:exon

position:207766:-1
position: 207766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207874:-1
position: 207874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206476-206570:-1:exon

position:206476:-1
position: 206476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206570:-1
position: 206570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:206154-206338:-1:exon

position:206154:-1
position: 206154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206338:-1
position: 206338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:205187-205254:-1:exon

position:205187:-1
position: 205187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205254:-1
position: 205254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:203985-204046:-1:exon

position:203985:-1
position: 203985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204046:-1
position: 204046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:202750-202854:-1:exon

position:202750:-1
position: 202750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202854:-1
position: 202854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:201682-201785:-1:exon

position:201682:-1
position: 201682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201785:-1
position: 201785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:201076-201193:-1:exon

position:201076:-1
position: 201076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201193:-1
position: 201193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:200761-200831:-1:exon

position:200761:-1
position: 200761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200831:-1
position: 200831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:200011-200092:-1:exon

position:200011:-1
position: 200011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200092:-1
position: 200092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:199490-199552:-1:exon

position:199490:-1
position: 199490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199552:-1
position: 199552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:199080-199142:-1:exon

position:199080:-1
position: 199080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199142:-1
position: 199142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:198329-198391:-1:exon

position:198329:-1
position: 198329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198391:-1
position: 198391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:197077-197193:-1:exon

position:197077:-1
position: 197077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197193:-1
position: 197193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:196348-196458:-1:exon

position:196348:-1
position: 196348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196458:-1
position: 196458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:195580-195672:-1:exon

position:195580:-1
position: 195580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195672:-1
position: 195672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:194588-194662:-1:exon

position:194588:-1
position: 194588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194662:-1
position: 194662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:193913-193972:-1:exon

position:193913:-1
position: 193913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193972:-1
position: 193972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:193594-193770:-1:exon

position:193594:-1
position: 193594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193770:-1
position: 193770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:192439-192582:-1:exon

position:192439:-1
position: 192439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192582:-1
position: 192582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:191992-192078:-1:exon

position:191992:-1
position: 191992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192078:-1
position: 192078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:191107-191906:-1:exon

position:191906:-1
position: 191906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1
translation: MEKEKPFKLFVPPRPSGGQVSAVKPQTSIRATGLCQGFNKCPDDDFNLPFVTTSIPNRGEITNSDAISQQVKLCSEADEENIATMNELYSKLYKEAEKIKQWKQTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEINENKDLLKENNASRHLCNLLKETCTHFTEKSTKYEHEREETRQVYVELNNNIERMIMAFEELRVQAENTRLEMCFKLKEEAEKVDKFEKECKLEVSMKEKQISALTIQSDEKDDIIRDIKTQLQEAKNKIADFVEAKRHEGELLRETQMNQEHLRAELEEAKVSLQKTEVTQKSLEIELQTAVNALIQVTGEKEAQVEECKKAKALHASLIEEYETSISNMKSFLQKEQNRLEKYEDESKLLTLELRNKSAELEEMTKLKCDKEMKLEELSETLGKVEGLLVKKKDLEATVENLQEKEKEMENTLQIREKEIHDLKVQLTSTAEKEQNYLKQLMTLNTDLEQEAQKNDQLTVYINKLLLEKEQLAQEKSGMATEIKKLGENHEDSRKKEENTKQLLENLEEANGQLRNELESLKEKMAKKGEEFKSKLDEREENAKSIENDISRKEKQLKILENKLNNLKKQVENKTKCIEELQQENKVLKKKITAESKKTSIYEGKVNKLQLEVENMNKQHKEAVDIYQKDIETKKVNENKLLEEVEKMRLLADEATITQRETDIKCQHKITEMMALMEKHKHEYDKMVEEKDTELKLYKIKEQEQLSSKRSLESELSCLRNELSSLKEQLKAAIEEKENLAKEHPQNMVPENEKKYKKVQTHFSETPKPHFDLDYESINLKNKKSPNDIPVKVNMMEEKKLPSVSAKSPLDSPSLKTYMIKTPPIHKLQSERTNLPSEQCMRKKQKVLLQLDVQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPATSNGKTPGSILKLTTMRKMREAGWTAVSKMDRKRKIKDAERLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(191763..191906,191992..192078,192439..192582,193594..193770,193913..193972,194588..194662,195580..195672,196348..196458,197077..197193,198329..198391,199080..199142,199490..199552,200011..200092,200761..200831,201076..201193,201682..201785,202750..202854,203985..204046,205187..205254,206154..206338,206476..206570,207766..207874,208812..208885,209493..209562,210713..210771,212055..212128,212317..212384,213228..213392,214638..214684,214849..214933,215943..216050))
location: region:191763-216050:-1
so has part: feature:215943-216050:-1:exon
so has part: feature:214849-214933:-1:exon
so has part: feature:214638-214684:-1:exon
so has part: feature:213228-213392:-1:exon
so has part: feature:212317-212384:-1:exon
so has part: feature:212055-212128:-1:exon
so has part: feature:210713-210771:-1:exon
so has part: feature:209493-209562:-1:exon
so has part: feature:208812-208885:-1:exon
so has part: feature:207766-207874:-1:exon
so has part: feature:206476-206570:-1:exon
so has part: feature:206154-206338:-1:exon
so has part: feature:205187-205254:-1:exon
so has part: feature:203985-204046:-1:exon
so has part: feature:202750-202854:-1:exon
so has part: feature:201682-201785:-1:exon
so has part: feature:201076-201193:-1:exon
so has part: feature:200761-200831:-1:exon
so has part: feature:200011-200092:-1:exon
so has part: feature:199490-199552:-1:exon
so has part: feature:199080-199142:-1:exon
so has part: feature:198329-198391:-1:exon
so has part: feature:197077-197193:-1:exon
so has part: feature:196348-196458:-1:exon
so has part: feature:195580-195672:-1:exon
so has part: feature:194588-194662:-1:exon
so has part: feature:193913-193972:-1:exon
so has part: feature:193594-193770:-1:exon
so has part: feature:192439-192582:-1:exon
so has part: feature:191992-192078:-1:exon
so has part: feature:191763-191906:-1:exon

XP_040472389.1
type: Protein
SIO_000068: ncbiprotein

position:191763:-1
position: 191763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215943-216050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214849-214933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214638-214684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213228-213392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212317-212384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212055-212128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210713-210771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209493-209562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208812-208885:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207766-207874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206476-206570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206154-206338:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205187-205254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203985-204046:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202750-202854:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201682-201785:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201076-201193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200761-200831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:200011-200092:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:199490-199552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199080-199142:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:198329-198391:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:197077-197193:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:196348-196458:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:195580-195672:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:194588-194662:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:193913-193972:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:193594-193770:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:192439-192582:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:191992-192078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:191763-191906:-1:exon

LOC121098462
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215250..227270)
location: region:215250-227270:-1
so has part: feature:215250-227270:-1:exon
subclass of: SO_0000010

121098462
type: Gene
SIO_000068: ncbigene

position:215250:-1
position: 215250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227270:-1
position: 227270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215250-227270:-1:exon

LOC121098462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098462
product: bile acid receptor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040616452.1
SIO_010081: LOC121098462
subclass of: SO_0000673
so part of: LOC121098462
location: complement(join(215250..216508,216628..216741,217124..217240,217704..217832,218970..219069,219167..219271,219361..219500,220116..220256,220865..221230,222416..222542,225398..225502,227020..227270))
location: region:215250-227270:-1
so has part: feature:227020-227270:-1:exon
so has part: feature:225398-225502:-1:exon
so has part: feature:222416-222542:-1:exon
so has part: feature:220865-221230:-1:exon
so has part: feature:220116-220256:-1:exon
so has part: feature:219361-219500:-1:exon
so has part: feature:219167-219271:-1:exon
so has part: feature:218970-219069:-1:exon
so has part: feature:217704-217832:-1:exon
so has part: feature:217124-217240:-1:exon
so has part: feature:216628-216741:-1:exon
so has part: feature:215250-216508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227020-227270:-1:exon

position:227020:-1
position: 227020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225398-225502:-1:exon

position:225398:-1
position: 225398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225502:-1
position: 225502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222416-222542:-1:exon

position:222416:-1
position: 222416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222542:-1
position: 222542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:220865-221230:-1:exon

position:220865:-1
position: 220865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221230:-1
position: 221230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:220116-220256:-1:exon

position:220116:-1
position: 220116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220256:-1
position: 220256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219361-219500:-1:exon

position:219361:-1
position: 219361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219500:-1
position: 219500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219167-219271:-1:exon

position:219167:-1
position: 219167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219271:-1
position: 219271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:218970-219069:-1:exon

position:218970:-1
position: 218970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219069:-1
position: 219069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217704-217832:-1:exon

position:217704:-1
position: 217704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217832:-1
position: 217832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:217124-217240:-1:exon

position:217124:-1
position: 217124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217240:-1
position: 217240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:216628-216741:-1:exon

position:216628:-1
position: 216628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216741:-1
position: 216741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:215250-216508:-1:exon

position:216508:-1
position: 216508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098462
product: bile acid receptor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_040616453.1
SIO_010081: LOC121098462
subclass of: SO_0000673
so part of: LOC121098462
location: complement(join(215250..216508,216628..216741,217124..217240,217704..217832,218970..219069,219167..219271,219361..219500,220116..220256,220865..221230,222416..222542,227020..227269))
location: region:215250-227269:-1
so has part: feature:227020-227269:-1:exon
so has part: feature:222416-222542:-1:exon
so has part: feature:220865-221230:-1:exon
so has part: feature:220116-220256:-1:exon
so has part: feature:219361-219500:-1:exon
so has part: feature:219167-219271:-1:exon
so has part: feature:218970-219069:-1:exon
so has part: feature:217704-217832:-1:exon
so has part: feature:217124-217240:-1:exon
so has part: feature:216628-216741:-1:exon
so has part: feature:215250-216508:-1:exon

position:227269:-1
position: 227269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227020-227269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222416-222542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220865-221230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220116-220256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219361-219500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219167-219271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218970-219069:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217704-217832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217124-217240:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216628-216741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215250-216508:-1:exon

LOC121098462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like isoform X1
translation: MCLCADDIFFQVAFLKVCHRANCMKRCNWEQNMANTFVTVPDGYCLPEPIQYYDVLPEHINYQLQDTDYQTAPYCQYSAAQIPPPVLQPQPSQPQYGTYGLDSPYSDGQCTTSSCELSKPSFVAPHNDDGGYQGLRRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCDIKLEDEGLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYTIPLEEAKKFLQETVSPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLHSAQIYNQRISECQPSTSESHVRLSDHRTCCHVQNLDKNIYSMEMSHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEMWDLH
SIO_010081: LOC121098462
subclass of: SO_0000673
so part of: LOC121098462
location: complement(join(216270..216508,216628..216741,217124..217240,217704..217832,218970..219069,219167..219271,219361..219500,220116..220256,220865..221230,222416..222542,225398..225430))
location: region:216270-225430:-1
so has part: feature:225398-225430:-1:exon
so has part: feature:222416-222542:-1:exon
so has part: feature:220865-221230:-1:exon
so has part: feature:220116-220256:-1:exon
so has part: feature:219361-219500:-1:exon
so has part: feature:219167-219271:-1:exon
so has part: feature:218970-219069:-1:exon
so has part: feature:217704-217832:-1:exon
so has part: feature:217124-217240:-1:exon
so has part: feature:216628-216741:-1:exon
so has part: feature:216270-216508:-1:exon

XP_040472386.1
type: Protein
SIO_000068: ncbiprotein

position:216270:-1
position: 216270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225430:-1
position: 225430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225398-225430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222416-222542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220865-221230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220116-220256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219361-219500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219167-219271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218970-219069:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217704-217832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217124-217240:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216628-216741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216270-216508:-1:exon

LOC121098462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like isoform X2
translation: MKRCNWEQNMANTFVTVPDGYCLPEPIQYYDVLPEHINYQLQDTDYQTAPYCQYSAAQIPPPVLQPQPSQPQYGTYGLDSPYSDGQCTTSSCELSKPSFVAPHNDDGGYQGLRRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCDIKLEDEGLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYTIPLEEAKKFLQETVSPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLHSAQIYNQRISECQPSTSESHVRLSDHRTCCHVQNLDKNIYSMEMSHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEMWDLH
SIO_010081: LOC121098462
subclass of: SO_0000673
so part of: LOC121098462
location: complement(join(216270..216508,216628..216741,217124..217240,217704..217832,218970..219069,219167..219271,219361..219500,220116..220256,220865..221230,222416..222506))
location: region:216270-222506:-1
so has part: feature:222416-222506:-1:exon
so has part: feature:220865-221230:-1:exon
so has part: feature:220116-220256:-1:exon
so has part: feature:219361-219500:-1:exon
so has part: feature:219167-219271:-1:exon
so has part: feature:218970-219069:-1:exon
so has part: feature:217704-217832:-1:exon
so has part: feature:217124-217240:-1:exon
so has part: feature:216628-216741:-1:exon
so has part: feature:216270-216508:-1:exon

XP_040472387.1
type: Protein
SIO_000068: ncbiprotein

position:222506:-1
position: 222506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222416-222506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220865-221230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220116-220256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219361-219500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219167-219271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218970-219069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217704-217832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217124-217240:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216628-216741:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216270-216508:-1:exon

LOC121098462
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: LOC121098462
product: bile acid receptor-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005831279.1
SIO_010081: LOC121098462
so part of: LOC121098462
location: complement(join(216423..216508,216628..216698,217124..217240,217704..217832,218970..219069,219167..219271,219361..219500,220116..220256,220865..221230,222416..222542,225398..225502,227020..227270))
location: region:216423-227270:-1
so has part: feature:227020-227270:-1:exon
so has part: feature:225398-225502:-1:exon
so has part: feature:222416-222542:-1:exon
so has part: feature:220865-221230:-1:exon
so has part: feature:220116-220256:-1:exon
so has part: feature:219361-219500:-1:exon
so has part: feature:219167-219271:-1:exon
so has part: feature:218970-219069:-1:exon
so has part: feature:217704-217832:-1:exon
so has part: feature:217124-217240:-1:exon
so has part: feature:216628-216698:-1:exon
so has part: feature:216423-216508:-1:exon

position:216423:-1
position: 216423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227020-227270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225398-225502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222416-222542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220865-221230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220116-220256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219361-219500:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219167-219271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218970-219069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217704-217832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217124-217240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216628-216698:-1:exon

position:216698:-1
position: 216698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:216423-216508:-1:exon

SIKE1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 235825..240607
location: region:235825-240607:1
so has part: feature:235825-240607:1:exon
subclass of: SO_0000010

121098548
type: Gene
SIO_000068: ncbigene

position:235825:1
position: 235825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240607:1
position: 240607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235825-240607:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_040616658.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235825..236281,236560..236702,238702..238815,238995..240607)
location: region:235825-240607:1
so has part: feature:235825-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:238995-240607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235825-236281:1:exon

position:236281:1
position: 236281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

position:236560:1
position: 236560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236702:1
position: 236702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

position:238702:1
position: 238702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238815:1
position: 238815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238995-240607:1:exon

position:238995:1
position: 238995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616661.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235826..236281,236560..236702,238702..238815,239170..240607)
location: region:235826-240607:1
so has part: feature:235826-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239170-240607:1:exon

position:235826:1
position: 235826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235826-236281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239170-240607:1:exon

position:239170:1
position: 239170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616659.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235826..236281,236560..236702,238702..238815,239190..240607)
location: region:235826-240607:1
so has part: feature:235826-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239190-240607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235826-236281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239190-240607:1:exon

position:239190:1
position: 239190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040616660.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235826..236079,236176..236281,236560..236702,238702..238815,238995..240607)
location: region:235826-240607:1
so has part: feature:235826-236079:1:exon
so has part: feature:236176-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:238995-240607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235826-236079:1:exon

position:236079:1
position: 236079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236176-236281:1:exon

position:236176:1
position: 236176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238995-240607:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040616662.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235827..236079,236176..236281,236560..236702,238702..238815,239190..240607)
location: region:235827-240607:1
so has part: feature:235827-236079:1:exon
so has part: feature:236176-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239190-240607:1:exon

position:235827:1
position: 235827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235827-236079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236176-236281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239190-240607:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X2
translation: MSCTIEKILTDAKTLLERLKEHDTAADSLIDQSAVLHQRVAAMREAGAAWAEKVGAGGGQRDPQPCLGRARAGGGAAGPTAVSRQVPGGAAERPDPARLRPHVLLSQENTQIRDLQQENRELWVSLEEHQDALELIMSKYRKQMLQLLQGRKGEGAEPVLKVHRSNSLEIESQIDRIREMGEVMRKAIQVDDDQFFKVQEKLAQLELENKELRELLSISKESFEVGREDLPDCEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235921..236281,236560..236702,238702..238815,239190..239279)
location: region:235921-239279:1
so has part: feature:235921-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239190-239279:1:exon

XP_040472593.1
type: Protein
SIO_000068: ncbiprotein

position:235921:1
position: 235921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239279:1
position: 239279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235921-236281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239190-239279:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X5
translation: MSCTIEKILTDAKTLLERLKEHDTAADSLIDQSAVLHQRVAAMREAGAAWAEKVPGGAAERPDPARLRPHVLLSQENTQIRDLQQENRELWVSLEEHQDALELIMSKYRKQMLQLLQGRKGEGAEPVLKVHRSNSLEIESQIDRIREMGEVMRKAIQVDDDQFFKVQEKLAQLELENKELRELLSISKESFEVGREDLPDCEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235921..236079,236176..236281,236560..236702,238702..238815,239190..239279)
location: region:235921-239279:1
so has part: feature:235921-236079:1:exon
so has part: feature:236176-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239190-239279:1:exon

XP_040472596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235921-236079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236176-236281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239190-239279:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X4
translation: MSCTIEKILTDAKTLLERLKEHDTAADSLIDQSAVLHQRVAAMREAGAAWAEKVGAGGGQRDPQPCLGRARAGGGAAGPTAVSRQVPGGAAERPDPARLRPHVLLSQENTQIRDLQQENRELWVSLEEHQDALELIMSKYRKQMLQLLQGRKGEGAEPVLKVHRSNSLEIESQIDRIREMGEVMRKAIQVDDDQFFKVQEKLAQLEQKY
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235921..236281,236560..236702,238702..238815,239170..239181)
location: region:235921-239181:1
so has part: feature:235921-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:239170-239181:1:exon

XP_040472595.1
type: Protein
SIO_000068: ncbiprotein

position:239181:1
position: 239181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235921-236281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239170-239181:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X1
translation: MSCTIEKILTDAKTLLERLKEHDTAADSLIDQSAVLHQRVAAMREAGAAWAEKVGAGGGQRDPQPCLGRARAGGGAAGPTAVSRQVPGGAAERPDPARLRPHVLLSQENTQIRDLQQENRELWVSLEEHQDALELIMSKYRKQMLQLLQGRKGEGAEPVLKVHRSNSLEIESQIDRIREMGEVMRKAIQVDDDQFFKVQEKLAQLEIYMYTRSQKQKISFKGCGSPLASTVLMLMLQNQCFI
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235921..236281,236560..236702,238702..238815,238995..239105)
location: region:235921-239105:1
so has part: feature:235921-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:238995-239105:1:exon

XP_040472592.1
type: Protein
SIO_000068: ncbiprotein

position:239105:1
position: 239105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235921-236281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238995-239105:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X3
translation: MSCTIEKILTDAKTLLERLKEHDTAADSLIDQSAVLHQRVAAMREAGAAWAEKVPGGAAERPDPARLRPHVLLSQENTQIRDLQQENRELWVSLEEHQDALELIMSKYRKQMLQLLQGRKGEGAEPVLKVHRSNSLEIESQIDRIREMGEVMRKAIQVDDDQFFKVQEKLAQLEIYMYTRSQKQKISFKGCGSPLASTVLMLMLQNQCFI
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(235921..236079,236176..236281,236560..236702,238702..238815,238995..239105)
location: region:235921-239105:1
so has part: feature:235921-236079:1:exon
so has part: feature:236176-236281:1:exon
so has part: feature:236560-236702:1:exon
so has part: feature:238702-238815:1:exon
so has part: feature:238995-239105:1:exon

XP_040472594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235921-236079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236176-236281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236560-236702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238702-238815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238995-239105:1:exon

CSDE1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 241337..263230
location: region:241337-263230:1
so has part: feature:241337-263230:1:exon
subclass of: SO_0000010

121098574
type: Gene
SIO_000068: ncbigene

position:241337:1
position: 241337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263230:1
position: 263230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241337-263230:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CSDE1
product: cold shock domain containing E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 61 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616734.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(241337..241442,245213..245653,250480..250678,251413..251522,251882..251974,252494..252591,252751..252832,253185..253313,253480..253605,254457..254669,256518..256658,256748..256906,257401..257508,258322..258497,258889..259001,259702..259821,260038..260216,261186..261349,262323..262455,263030..263230)
location: region:241337-263230:1
so has part: feature:241337-241442:1:exon
so has part: feature:245213-245653:1:exon
so has part: feature:250480-250678:1:exon
so has part: feature:251413-251522:1:exon
so has part: feature:251882-251974:1:exon
so has part: feature:252494-252591:1:exon
so has part: feature:252751-252832:1:exon
so has part: feature:253185-253313:1:exon
so has part: feature:253480-253605:1:exon
so has part: feature:254457-254669:1:exon
so has part: feature:256518-256658:1:exon
so has part: feature:256748-256906:1:exon
so has part: feature:257401-257508:1:exon
so has part: feature:258322-258497:1:exon
so has part: feature:258889-259001:1:exon
so has part: feature:259702-259821:1:exon
so has part: feature:260038-260216:1:exon
so has part: feature:261186-261349:1:exon
so has part: feature:262323-262455:1:exon
so has part: feature:263030-263230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241337-241442:1:exon

position:241442:1
position: 241442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245213-245653:1:exon

position:245213:1
position: 245213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245653:1
position: 245653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250480-250678:1:exon

position:250480:1
position: 250480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250678:1
position: 250678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251413-251522:1:exon

position:251413:1
position: 251413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251522:1
position: 251522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251882-251974:1:exon

position:251882:1
position: 251882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251974:1
position: 251974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252494-252591:1:exon

position:252494:1
position: 252494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252591:1
position: 252591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:252751-252832:1:exon

position:252751:1
position: 252751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252832:1
position: 252832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:253185-253313:1:exon

position:253185:1
position: 253185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253313:1
position: 253313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:253480-253605:1:exon

position:253480:1
position: 253480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253605:1
position: 253605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:254457-254669:1:exon

position:254457:1
position: 254457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254669:1
position: 254669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:256518-256658:1:exon

position:256518:1
position: 256518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256658:1
position: 256658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:256748-256906:1:exon

position:256748:1
position: 256748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256906:1
position: 256906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:257401-257508:1:exon

position:257401:1
position: 257401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257508:1
position: 257508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:258322-258497:1:exon

position:258322:1
position: 258322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258497:1
position: 258497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258889-259001:1:exon

position:258889:1
position: 258889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259001:1
position: 259001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:259702-259821:1:exon

position:259702:1
position: 259702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259821:1
position: 259821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:260038-260216:1:exon

position:260038:1
position: 260038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260216:1
position: 260216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:261186-261349:1:exon

position:261186:1
position: 261186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261349:1
position: 261349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:262323-262455:1:exon

position:262323:1
position: 262323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262455:1
position: 262455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:263030-263230:1:exon

position:263030:1
position: 263030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQSDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSTQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFCVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPAVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEVYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDASAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(250480..250678,251413..251522,251882..251974,252494..252591,252751..252832,253185..253313,253480..253605,254457..254669,256518..256658,256748..256906,257401..257508,258322..258497,258889..259001,259702..259821,260038..260216,261186..261349,262323..262455,263030..263077)
location: region:250480-263077:1
so has part: feature:250480-250678:1:exon
so has part: feature:251413-251522:1:exon
so has part: feature:251882-251974:1:exon
so has part: feature:252494-252591:1:exon
so has part: feature:252751-252832:1:exon
so has part: feature:253185-253313:1:exon
so has part: feature:253480-253605:1:exon
so has part: feature:254457-254669:1:exon
so has part: feature:256518-256658:1:exon
so has part: feature:256748-256906:1:exon
so has part: feature:257401-257508:1:exon
so has part: feature:258322-258497:1:exon
so has part: feature:258889-259001:1:exon
so has part: feature:259702-259821:1:exon
so has part: feature:260038-260216:1:exon
so has part: feature:261186-261349:1:exon
so has part: feature:262323-262455:1:exon
so has part: feature:263030-263077:1:exon

XP_040472668.1
type: Protein
SIO_000068: ncbiprotein

position:263077:1
position: 263077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250480-250678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251413-251522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251882-251974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252494-252591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252751-252832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253185-253313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253480-253605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254457-254669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256518-256658:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256748-256906:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257401-257508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258322-258497:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258889-259001:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259702-259821:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:260038-260216:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261186-261349:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262323-262455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:263030-263077:1:exon

NRAS
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 264500..270941
location: region:264500-270941:1
so has part: feature:264500-270941:1:exon
subclass of: SO_0000010

121098575
type: Gene
SIO_000068: ncbigene

position:264500:1
position: 264500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270941:1
position: 270941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264500-270941:1:exon

NRAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NRAS
product: NRAS proto-oncogene, GTPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 88 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616735.1
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(264500..264654,265041..265219,265680..265839,266660..266783,267334..270941)
location: region:264500-270941:1
so has part: feature:264500-264654:1:exon
so has part: feature:265041-265219:1:exon
so has part: feature:265680-265839:1:exon
so has part: feature:266660-266783:1:exon
so has part: feature:267334-270941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264500-264654:1:exon

position:264654:1
position: 264654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265041-265219:1:exon

position:265041:1
position: 265041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265219:1
position: 265219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265680-265839:1:exon

position:265680:1
position: 265680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265839:1
position: 265839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266660-266783:1:exon

position:266660:1
position: 266660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266783:1
position: 266783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:267334-270941:1:exon

position:267334:1
position: 267334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase NRas
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSNEDGNQGCMGLSCIVM
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(264544..264654,265041..265219,265680..265839,266660..266779)
location: region:264544-266779:1
so has part: feature:264544-264654:1:exon
so has part: feature:265041-265219:1:exon
so has part: feature:265680-265839:1:exon
so has part: feature:266660-266779:1:exon

XP_040472669.1
type: Protein
SIO_000068: ncbiprotein

position:264544:1
position: 264544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266779:1
position: 266779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264544-264654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265041-265219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265680-265839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266660-266779:1:exon

AMPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277549..284582
location: region:277549-284582:1
so has part: feature:277549-284582:1:exon
subclass of: SO_0000010

121098576
type: Gene
SIO_000068: ncbigene

position:277549:1
position: 277549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284582:1
position: 284582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277549-284582:1:exon

AMPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AMPD1
product: adenosine monophosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616736.1
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(277549..277721,278214..278379,279500..279662,279892..280111,280537..280666,280951..281145,281414..281545,281639..281802,281936..282062,282515..282678,283069..283189,283642..283815,283980..284090,284278..284582)
location: region:277549-284582:1
so has part: feature:277549-277721:1:exon
so has part: feature:278214-278379:1:exon
so has part: feature:279500-279662:1:exon
so has part: feature:279892-280111:1:exon
so has part: feature:280537-280666:1:exon
so has part: feature:280951-281145:1:exon
so has part: feature:281414-281545:1:exon
so has part: feature:281639-281802:1:exon
so has part: feature:281936-282062:1:exon
so has part: feature:282515-282678:1:exon
so has part: feature:283069-283189:1:exon
so has part: feature:283642-283815:1:exon
so has part: feature:283980-284090:1:exon
so has part: feature:284278-284582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277549-277721:1:exon

position:277721:1
position: 277721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278214-278379:1:exon

position:278214:1
position: 278214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278379:1
position: 278379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279500-279662:1:exon

position:279500:1
position: 279500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279662:1
position: 279662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279892-280111:1:exon

position:279892:1
position: 279892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280111:1
position: 280111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:280537-280666:1:exon

position:280537:1
position: 280537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280666:1
position: 280666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280951-281145:1:exon

position:280951:1
position: 280951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281145:1
position: 281145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:281414-281545:1:exon

position:281414:1
position: 281414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281545:1
position: 281545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:281639-281802:1:exon

position:281639:1
position: 281639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281802:1
position: 281802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:281936-282062:1:exon

position:281936:1
position: 281936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282062:1
position: 282062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:282515-282678:1:exon

position:282515:1
position: 282515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282678:1
position: 282678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283069-283189:1:exon

position:283069:1
position: 283069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283189:1
position: 283189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:283642-283815:1:exon

position:283642:1
position: 283642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283815:1
position: 283815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:283980-284090:1:exon

position:283980:1
position: 283980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284090:1
position: 284090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:284278-284582:1:exon

position:284278:1
position: 284278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 1
translation: MNEAMRSFAEKVFASEVKDEEIRQEISPFDVEEVCPISREEMRAHMMLQESSATTEKRRKRLLRLKTIALAVPVAQKSITSLSALDEVISTSPVYQTVPDFQRVQITGDYASGVTVEDFEIVCKGLYRALCIREKYMQQSLQRFPRTPSQYLRAIEGEVWRASNTGPVFTPPVKDGEDPFETGNLAEDLGYHVQMKDGVAYIYGDKAAAGRNEPKDLPYPSLEDFVDDMNFLLALIAQGPVKTYTHRRLKFLSSKFQVHQMLNEMEEMKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYRVDADRVVYDAKGKQLTLKQLFQQLNLHPYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTENPINGEYFATIIKEVGSDLEDAKYQHAEPRLSIYGRSAEEWHKLANWFNKHRVYSPNMKWMIQVPRIYDVFRSKNFLPHFGKMLENIFVPVFEATINPRAHKELSVFLRHITGFDSVDDESKHSGHMFCTKSPKPEQWTSEKNPSYTYYIYYMYANILVLNNLRRQRGMNTFLFRPHCGEAGAITHLLTAFMTADNISHGLNLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYAKNPLPDFHQKGLMVSLSTDDPMQFHFTKEPLMEEYAIAAQVFKLNTCDMCEIARNSVLQCGLSHEEKAKFLGENYQEEGLQGNDIRKTNVAQIRVAYRYETWCYELNLIAEGVKAD
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(277549..277721,278214..278379,279500..279662,279892..280111,280537..280666,280951..281145,281414..281545,281639..281802,281936..282062,282515..282678,283069..283189,283642..283815,283980..284090,284278..284433)
location: region:277549-284433:1
so has part: feature:277549-277721:1:exon
so has part: feature:278214-278379:1:exon
so has part: feature:279500-279662:1:exon
so has part: feature:279892-280111:1:exon
so has part: feature:280537-280666:1:exon
so has part: feature:280951-281145:1:exon
so has part: feature:281414-281545:1:exon
so has part: feature:281639-281802:1:exon
so has part: feature:281936-282062:1:exon
so has part: feature:282515-282678:1:exon
so has part: feature:283069-283189:1:exon
so has part: feature:283642-283815:1:exon
so has part: feature:283980-284090:1:exon
so has part: feature:284278-284433:1:exon

XP_040472670.1
type: Protein
SIO_000068: ncbiprotein

position:284433:1
position: 284433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277549-277721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278214-278379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279500-279662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279892-280111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280537-280666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280951-281145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281414-281545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281639-281802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281936-282062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282515-282678:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283069-283189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283642-283815:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283980-284090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:284278-284433:1:exon

DENND2C
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284572..310591
location: region:284572-310591:1
so has part: feature:284572-310591:1:exon
subclass of: SO_0000010

121098573
type: Gene
SIO_000068: ncbigene

position:284572:1
position: 284572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310591:1
position: 310591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284572-310591:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DENND2C
product: DENN domain containing 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040616729.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(284572..284642,292444..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300120,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310591)
location: region:284572-310591:1
so has part: feature:284572-284642:1:exon
so has part: feature:292444-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300120:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284572-284642:1:exon

position:284642:1
position: 284642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292444-293408:1:exon

position:292444:1
position: 292444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293408:1
position: 293408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295118-295266:1:exon

position:295118:1
position: 295118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295266:1
position: 295266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295814-295926:1:exon

position:295814:1
position: 295814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295926:1
position: 295926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296293-296460:1:exon

position:296293:1
position: 296293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296460:1
position: 296460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299236-299332:1:exon

position:299236:1
position: 299236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299332:1
position: 299332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:300076-300120:1:exon

position:300076:1
position: 300076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300120:1
position: 300120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301627-301808:1:exon

position:301627:1
position: 301627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301808:1
position: 301808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304040-304149:1:exon

position:304040:1
position: 304040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304149:1
position: 304149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304606-304675:1:exon

position:304606:1
position: 304606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304675:1
position: 304675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305055-305132:1:exon

position:305055:1
position: 305055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305132:1
position: 305132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:305950-306090:1:exon

position:305950:1
position: 305950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306090:1
position: 306090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:306388-306536:1:exon

position:306388:1
position: 306388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306536:1
position: 306536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:306929-307106:1:exon

position:306929:1
position: 306929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307106:1
position: 307106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:307494-307535:1:exon

position:307494:1
position: 307494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307535:1
position: 307535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:308485-308590:1:exon

position:308485:1
position: 308485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308590:1
position: 308590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:309416-309655:1:exon

position:309416:1
position: 309416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309655:1
position: 309655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:309993-310079:1:exon

position:309993:1
position: 309993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310079:1
position: 310079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:310407-310591:1:exon

position:310407:1
position: 310407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DENND2C
product: DENN domain containing 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040616730.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(284572..284642,292444..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300108,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310591)
location: region:284572-310591:1
so has part: feature:284572-284642:1:exon
so has part: feature:292444-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300108:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284572-284642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292444-293408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300076-300108:1:exon

position:300108:1
position: 300108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:309416-309655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:309993-310079:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:310407-310591:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DENND2C
product: DENN domain containing 2C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040616731.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(284572..284642,292444..293408,295118..295266,295814..295926,296293..296460,299236..299332,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310591)
location: region:284572-310591:1
so has part: feature:284572-284642:1:exon
so has part: feature:292444-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284572-284642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292444-293408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:309416-309655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:309993-310079:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:310407-310591:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DENND2C
product: DENN domain containing 2C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616733.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(284572..284642,292444..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300120,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308103..308119,308485..308590,309416..309614)
location: region:284572-309614:1
so has part: feature:284572-284642:1:exon
so has part: feature:292444-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300120:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308103-308119:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309614:1:exon

position:309614:1
position: 309614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284572-284642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292444-293408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300076-300120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:308103-308119:1:exon

position:308103:1
position: 308103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308119:1
position: 308119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:309416-309614:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X1
translation: MHPTGSEDSSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSNKEKQQLKDFGVKYDPSYNALPKVKPEHAEKGTKTGSKDPKSLGLDFREYAQSCLQTGVSGDLKPCVCSPASQANQKGEWQGGFLDLGATLPPGNFYTSQALWRRVDPLLPGKAPSFPLDFQRRQGVCGSTERELEIKGMDSLCRAERSLKNIYSEAEEQEKELAAVPPPKPRRTFRYFAEKGASSCSDANATRELFLQKQRGGDLVSSSGSPEKKTASRRIRGRTQRKSFEFEDIQGFCNQRATTNSHRLQEETNGTTRSRLVYTQSEDNIYEDIICPAKENPYEGIRALPLPLWKVPSVWKLPPPWSTSKAPKPLPKPPFLSGKALELKPSQTSFQGKMVKDITLPVTPTEWNLFRAVEAASKRKNLPWLVLKIQKIFDSKRGKKRLKLLSPAGREVPPVKGETSGNESDTEGQPKSQHRCLLQSASKRNPRYQTLERDLIELQEQRLFELFVVVSLHKKSPEMTYTPQIIQQFPSKPEHPFRQSKDTEERLKVIPKFCFPDPKDWFPTSDLKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTIAVRSFLPGAGNEVMELCRPLDSRLEHVDFECLFKCLSVSHTIRVFASLLLERRVIFVADNLSTLSKCGHAAVAMLYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPIEEVLIVDLCADKFLQEASDEDAILPDKLQAALVQILEERSEILSHVQSDTQGDIPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRERFRKSHVSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEYLESISETEPTGMNKILRNLGSKMKFLQKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(292600..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300120,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310438)
location: region:292600-310438:1
so has part: feature:292600-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300120:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310438:1:exon

XP_040472663.1
type: Protein
SIO_000068: ncbiprotein

position:292600:1
position: 292600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310438:1
position: 310438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292600-293408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300076-300120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:309416-309655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:309993-310079:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:310407-310438:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X2
translation: MHPTGSEDSSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSNKEKQQLKDFGVKYDPSYNALPKVKPEHAEKGTKTGSKDPKSLGLDFREYAQSCLQTGVSGDLKPCVCSPASQANQKGEWQGGFLDLGATLPPGNFYTSQALWRRVDPLLPGKAPSFPLDFQRRQGVCGSTERELEIKGMDSLCRAERSLKNIYSEAEEQEKELAAVPPPKPRRTFRYFAEKGASSCSDANATRELFLQKQRGGDLVSSSGSPEKKTASRRIRGRTQRKSFEFEDIQGFCNQRATTNSHRLQEETNGTTRSRLVYTQSEDNIYEDIICPAKENPYEGIRALPLPLWKVPSVWKLPPPWSTSKAPKPLPKPPFLSGKALELKPSQTSFQGKMVKDITLPVTPTEWNLFRAVEAASKRKNLPWLVLKIQKIFDSKRGKKRLKLLSPAGREVPPVKGETSGNESDTEGQHRCLLQSASKRNPRYQTLERDLIELQEQRLFELFVVVSLHKKSPEMTYTPQIIQQFPSKPEHPFRQSKDTEERLKVIPKFCFPDPKDWFPTSDLKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTIAVRSFLPGAGNEVMELCRPLDSRLEHVDFECLFKCLSVSHTIRVFASLLLERRVIFVADNLSTLSKCGHAAVAMLYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPIEEVLIVDLCADKFLQEASDEDAILPDKLQAALVQILEERSEILSHVQSDTQGDIPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRERFRKSHVSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEYLESISETEPTGMNKILRNLGSKMKFLQKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(292600..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300108,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310438)
location: region:292600-310438:1
so has part: feature:292600-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300108:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310438:1:exon

XP_040472664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292600-293408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300076-300108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:309416-309655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:309993-310079:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:310407-310438:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X3
translation: MHPTGSEDSSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSNKEKQQLKDFGVKYDPSYNALPKVKPEHAEKGTKTGSKDPKSLGLDFREYAQSCLQTGVSGDLKPCVCSPASQANQKGEWQGGFLDLGATLPPGNFYTSQALWRRVDPLLPGKAPSFPLDFQRRQGVCGSTERELEIKGMDSLCRAERSLKNIYSEAEEQEKELAAVPPPKPRRTFRYFAEKGASSCSDANATRELFLQKQRGGDLVSSSGSPEKKTASRRIRGRTQRKSFEFEDIQGFCNQRATTNSHRLQEETNGTTRSRLVYTQSEDNIYEDIICPAKENPYEGIRALPLPLWKVPSVWKLPPPWSTSKAPKPLPKPPFLSGKALELKPSQTSFQGKMVKDITLPVTPTEWNLFRAVEAASKRKNLPWLVLKIQKIFDSKRGKKRLKLLSPAGREVPPVKGQHRCLLQSASKRNPRYQTLERDLIELQEQRLFELFVVVSLHKKSPEMTYTPQIIQQFPSKPEHPFRQSKDTEERLKVIPKFCFPDPKDWFPTSDLKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTIAVRSFLPGAGNEVMELCRPLDSRLEHVDFECLFKCLSVSHTIRVFASLLLERRVIFVADNLSTLSKCGHAAVAMLYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPIEEVLIVDLCADKFLQEASDEDAILPDKLQAALVQILEERSEILSHVQSDTQGDIPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRERFRKSHVSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEYLESISETEPTGMNKILRNLGSKMKFLQKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(292600..293408,295118..295266,295814..295926,296293..296460,299236..299332,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308485..308590,309416..309655,309993..310079,310407..310438)
location: region:292600-310438:1
so has part: feature:292600-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309655:1:exon
so has part: feature:309993-310079:1:exon
so has part: feature:310407-310438:1:exon

XP_040472665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292600-293408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:309416-309655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:309993-310079:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310407-310438:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X4
translation: MHPTGSEDSSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSNKEKQQLKDFGVKYDPSYNALPKVKPEHAEKGTKTGSKDPKSLGLDFREYAQSCLQTGVSGDLKPCVCSPASQANQKGEWQGGFLDLGATLPPGNFYTSQALWRRVDPLLPGKAPSFPLDFQRRQGVCGSTERELEIKGMDSLCRAERSLKNIYSEAEEQEKELAAVPPPKPRRTFRYFAEKGASSCSDANATRELFLQKQRGGDLVSSSGSPEKKTASRRIRGRTQRKSFEFEDIQGFCNQRATTNSHRLQEETNGTTRSRLVYTQSEDNIYEDIICPAKENPYEGIRALPLPLWKVPSVWKLPPPWSTSKAPKPLPKPPFLSGKALELKPSQTSFQGKMVKDITLPVTPTEWNLFRAVEAASKRKNLPWLVLKIQKIFDSKRGKKRLKLLSPAGREVPPVKGETSGNESDTEGQPKSQHRCLLQSASKRNPRYQTLERDLIELQEQRLFELFVVVSLHKKSPEMTYTPQIIQQFPSKPEHPFRQSKDTEERLKVIPKFCFPDPKDWFPTSDLKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTIAVRSFLPGAGNEVMELCRPLDSRLEHVDFECLFKCLSVSHTIRVFASLLLERRVIFVADNLSTLSKCGHAAVAMLYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPIEEVLIVDLCADKFLQESAIGERHQMKMQSCLINSRLHLCKSWKNEVKSCHMCRVIHKVTYLLTPWFLKLLCSSLWRLLDTTPCT
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(292600..293408,295118..295266,295814..295926,296293..296460,299236..299332,300076..300120,301627..301808,304040..304149,304606..304675,305055..305132,305950..306090,306388..306536,306929..307106,307494..307535,308103..308119,308485..308590,309416..309499)
location: region:292600-309499:1
so has part: feature:292600-293408:1:exon
so has part: feature:295118-295266:1:exon
so has part: feature:295814-295926:1:exon
so has part: feature:296293-296460:1:exon
so has part: feature:299236-299332:1:exon
so has part: feature:300076-300120:1:exon
so has part: feature:301627-301808:1:exon
so has part: feature:304040-304149:1:exon
so has part: feature:304606-304675:1:exon
so has part: feature:305055-305132:1:exon
so has part: feature:305950-306090:1:exon
so has part: feature:306388-306536:1:exon
so has part: feature:306929-307106:1:exon
so has part: feature:307494-307535:1:exon
so has part: feature:308103-308119:1:exon
so has part: feature:308485-308590:1:exon
so has part: feature:309416-309499:1:exon

XP_040472667.1
type: Protein
SIO_000068: ncbiprotein

position:309499:1
position: 309499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292600-293408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295118-295266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295814-295926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296293-296460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299236-299332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300076-300120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301627-301808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304040-304149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304606-304675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305055-305132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305950-306090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306388-306536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306929-307106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:307494-307535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:308103-308119:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:308485-308590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:309416-309499:1:exon

BCAS2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 310861..315644
location: region:310861-315644:1
so has part: feature:310861-315644:1:exon
subclass of: SO_0000010

121098597
type: Gene
SIO_000068: ncbigene

position:310861:1
position: 310861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315644:1
position: 315644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310861-315644:1:exon

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: BCAS2
product: BCAS2 pre-mRNA processing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616788.1
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(310861..310996,311084..311176,311311..311381,311477..311638,312664..312714,313813..313893,315192..315644)
location: region:310861-315644:1
so has part: feature:310861-310996:1:exon
so has part: feature:311084-311176:1:exon
so has part: feature:311311-311381:1:exon
so has part: feature:311477-311638:1:exon
so has part: feature:312664-312714:1:exon
so has part: feature:313813-313893:1:exon
so has part: feature:315192-315644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310861-310996:1:exon

position:310996:1
position: 310996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311084-311176:1:exon

position:311084:1
position: 311084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311176:1
position: 311176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311381:1:exon

position:311311:1
position: 311311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311381:1
position: 311381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311477-311638:1:exon

position:311477:1
position: 311477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311638:1
position: 311638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312664-312714:1:exon

position:312664:1
position: 312664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312714:1
position: 312714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313813-313893:1:exon

position:313813:1
position: 313813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313893:1
position: 313893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315192-315644:1:exon

position:315192:1
position: 315192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSAFETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDFQ
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(310904..310996,311084..311176,311311..311381,311477..311638,312664..312714,313813..313893,315192..315321)
location: region:310904-315321:1
so has part: feature:310904-310996:1:exon
so has part: feature:311084-311176:1:exon
so has part: feature:311311-311381:1:exon
so has part: feature:311477-311638:1:exon
so has part: feature:312664-312714:1:exon
so has part: feature:313813-313893:1:exon
so has part: feature:315192-315321:1:exon

XP_040472722.1
type: Protein
SIO_000068: ncbiprotein

position:310904:1
position: 310904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315321:1
position: 315321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310904-310996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311084-311176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311477-311638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312664-312714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313813-313893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315192-315321:1:exon

TRIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317386..357632
location: region:317386-357632:1
so has part: feature:317386-357632:1:exon
subclass of: SO_0000010

121098458
type: Gene
SIO_000068: ncbigene

position:317386:1
position: 317386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357632:1
position: 357632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317386-357632:1:exon

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TRIM33
product: tripartite motif containing 33, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616438.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317386..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352301..352351,352434..357632)
location: region:317386-357632:1
so has part: feature:317386-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352301-352351:1:exon
so has part: feature:352434-357632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317386-317850:1:exon

position:317850:1
position: 317850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

position:328370:1
position: 328370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328488:1
position: 328488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

position:328593:1
position: 328593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328740:1
position: 328740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

position:331028:1
position: 331028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331160:1
position: 331160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

position:334151:1
position: 334151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334267:1
position: 334267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

position:336899:1
position: 336899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337013:1
position: 337013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

position:338872:1
position: 338872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339018:1
position: 339018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

position:339544:1
position: 339544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339661:1
position: 339661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

position:341447:1
position: 341447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341691:1
position: 341691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

position:341938:1
position: 341938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342102:1
position: 342102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

position:342935:1
position: 342935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343135:1
position: 343135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

position:345121:1
position: 345121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345253:1
position: 345253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

position:346185:1
position: 346185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346248:1
position: 346248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

position:346553:1
position: 346553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346712:1
position: 346712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

position:347778:1
position: 347778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348124:1
position: 348124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

position:348573:1
position: 348573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348696:1
position: 348696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

position:349720:1
position: 349720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349794:1
position: 349794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

position:350355:1
position: 350355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350507:1
position: 350507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:352301-352351:1:exon

position:352301:1
position: 352301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352351:1
position: 352351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:352434-357632:1:exon

position:352434:1
position: 352434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TRIM33
product: tripartite motif containing 33, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040616440.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317393..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,351624..352327)
location: region:317393-352327:1
so has part: feature:317393-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:351624-352327:1:exon

position:317393:1
position: 317393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352327:1
position: 352327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317393-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:351624-352327:1:exon

position:351624:1
position: 351624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TRIM33
product: tripartite motif containing 33, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040616439.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317394..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352434..357632)
location: region:317394-357632:1
so has part: feature:317394-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352434-357632:1:exon

position:317394:1
position: 317394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317394-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352434-357632:1:exon

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TRIM33
product: tripartite motif containing 33, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616441.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317394..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352301..352351,352434..357632)
location: region:317394-357632:1
so has part: feature:317394-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352301-352351:1:exon
so has part: feature:352434-357632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317394-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:352301-352351:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352434-357632:1:exon

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33 isoform X1
translation: MAENKGGGGGGEGAAEAGPGGGGGLEPAAASPSAAAPPEERESPGPVAAERGLGEAEAEAAAAGPGVVLGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHINKAPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPAGSVPRQTSPQVLQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSNLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTGINFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPADLSESCKQSGHSLVNGKSPVRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317421..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352301..352351,352434..352646)
location: region:317421-352646:1
so has part: feature:317421-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352301-352351:1:exon
so has part: feature:352434-352646:1:exon

XP_040472372.1
type: Protein
SIO_000068: ncbiprotein

position:317421:1
position: 317421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352646:1
position: 352646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317421-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352301-352351:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:352434-352646:1:exon

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33 isoform X2
translation: MAENKGGGGGGEGAAEAGPGGGGGLEPAAASPSAAAPPEERESPGPVAAERGLGEAEAEAAAAGPGVVLGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHINKAPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPAGSVPRQTSPQVLQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSNLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTGINFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPADLSESCKQSGHSLVNGKSPVRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317421..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352434..352646)
location: region:317421-352646:1
so has part: feature:317421-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352434-352646:1:exon

XP_040472373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317421-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352434-352646:1:exon

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33 isoform X4
translation: MAENKGGGGGGEGAAEAGPGGGGGLEPAAASPSAAAPPEERESPGPVAAERGLGEAEAEAAAAGPGVVLGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHINKAPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPAGSVPRQTSPQVLQQQHSNPGHAGPFPVVSVHNTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSNLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTGINFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPADLSESCKQSGHSLVNGKSPVRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317421..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,352301..352351,352434..352646)
location: region:317421-352646:1
so has part: feature:317421-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:352301-352351:1:exon
so has part: feature:352434-352646:1:exon

XP_040472375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317421-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:352301-352351:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352434-352646:1:exon

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33 isoform X3
translation: MAENKGGGGGGEGAAEAGPGGGGGLEPAAASPSAAAPPEERESPGPVAAERGLGEAEAEAAAAGPGVVLGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHINKAPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPAGSVPRQTSPQVLQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSNLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTGINFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPADLSESCKQSGHSLVNGKSPVRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEVEVNEHCGRRCNYVNFSIKGINEASTIEENMLQLLGTSKTREQ
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(317421..317850,328370..328488,328593..328740,331028..331160,334151..334267,336899..337013,338872..339018,339544..339661,341447..341691,341938..342102,342935..343135,345121..345253,346185..346248,346553..346712,347778..348124,348573..348696,349720..349794,350355..350507,351624..351755)
location: region:317421-351755:1
so has part: feature:317421-317850:1:exon
so has part: feature:328370-328488:1:exon
so has part: feature:328593-328740:1:exon
so has part: feature:331028-331160:1:exon
so has part: feature:334151-334267:1:exon
so has part: feature:336899-337013:1:exon
so has part: feature:338872-339018:1:exon
so has part: feature:339544-339661:1:exon
so has part: feature:341447-341691:1:exon
so has part: feature:341938-342102:1:exon
so has part: feature:342935-343135:1:exon
so has part: feature:345121-345253:1:exon
so has part: feature:346185-346248:1:exon
so has part: feature:346553-346712:1:exon
so has part: feature:347778-348124:1:exon
so has part: feature:348573-348696:1:exon
so has part: feature:349720-349794:1:exon
so has part: feature:350355-350507:1:exon
so has part: feature:351624-351755:1:exon

XP_040472374.1
type: Protein
SIO_000068: ncbiprotein

position:351755:1
position: 351755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317421-317850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328370-328488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328593-328740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331028-331160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334151-334267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336899-337013:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338872-339018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339544-339661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341447-341691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341938-342102:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342935-343135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345121-345253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346185-346248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:346553-346712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:347778-348124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:348573-348696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349720-349794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:350355-350507:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:351624-351755:1:exon

SYT6
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 373827..412727
location: region:373827-412727:1
so has part: feature:373827-412727:1:exon
subclass of: SO_0000010

121098731
type: Gene
SIO_000068: ncbigene

position:373827:1
position: 373827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412727:1
position: 412727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373827-412727:1:exon

SYT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SYT6
product: synaptotagmin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617027.1
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(373827..374229,394293..394629,396553..397111,402705..402825,404352..404523,405178..405328,411111..412727)
location: region:373827-412727:1
so has part: feature:373827-374229:1:exon
so has part: feature:394293-394629:1:exon
so has part: feature:396553-397111:1:exon
so has part: feature:402705-402825:1:exon
so has part: feature:404352-404523:1:exon
so has part: feature:405178-405328:1:exon
so has part: feature:411111-412727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373827-374229:1:exon

position:374229:1
position: 374229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394293-394629:1:exon

position:394293:1
position: 394293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394629:1
position: 394629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396553-397111:1:exon

position:396553:1
position: 396553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397111:1
position: 397111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402705-402825:1:exon

position:402705:1
position: 402705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402825:1
position: 402825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404352-404523:1:exon

position:404352:1
position: 404352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404523:1
position: 404523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405178-405328:1:exon

position:405178:1
position: 405178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405328:1
position: 405328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:411111-412727:1:exon

position:411111:1
position: 411111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-6
translation: MSGTKDDSRCQKAVRIVTELCQKKSLPSLDLDTCREFLLLPSDQSLIISEPELSVSLLAVIVIVCGLALVALFLFLFWKLCWVPWRNKAIPSNLAVLQSEAGCNKENMADKLKDTGALSFLEAAVKISHTSPDIPAEVQTSMKDHIMRRTRIQRQTTEPASSTRHISFKRHLPRQMHVSSMDYGMDPPAVAEQPTSIGRIKPELYKQKSFDSEDPKKEVAKTCGKINFTLKYDYENETLTVRILRAFDLPAKDFCGSSDPYVKIYLLPDRKRKFQTRVHRKTLNPTFDESFHFPVPHEELASRKLHLSVFDFDRFSRHDMIGEVILENLFEASDLSRETSIWKDIQYATTESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPTYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGVSAEGLGRDHWNEMLAYPRKPIAHWHPLVEVKKSFKEWQGRAASFDSQGSCPSPKPPPTP
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(374076..374229,394293..394629,396553..397111,402705..402825,404352..404523,405178..405328,411111..411182)
location: region:374076-411182:1
so has part: feature:374076-374229:1:exon
so has part: feature:394293-394629:1:exon
so has part: feature:396553-397111:1:exon
so has part: feature:402705-402825:1:exon
so has part: feature:404352-404523:1:exon
so has part: feature:405178-405328:1:exon
so has part: feature:411111-411182:1:exon

XP_040472961.1
type: Protein
SIO_000068: ncbiprotein

position:374076:1
position: 374076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411182:1
position: 411182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374076-374229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394293-394629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396553-397111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402705-402825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404352-404523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405178-405328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411111-411182:1:exon

OLFML3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427908..430762)
location: region:427908-430762:-1
so has part: feature:427908-430762:-1:exon
subclass of: SO_0000010

121098492
type: Gene
SIO_000068: ncbigene

position:427908:-1
position: 427908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430762:-1
position: 430762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427908-430762:-1:exon

OLFML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: OLFML3
product: olfactomedin like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_040616514.1
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(427908..428969,429401..429686,430055..430762))
location: region:427908-430762:-1
so has part: feature:430055-430762:-1:exon
so has part: feature:429401-429686:-1:exon
so has part: feature:427908-428969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430055-430762:-1:exon

position:430055:-1
position: 430055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429401-429686:-1:exon

position:429401:-1
position: 429401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429686:-1
position: 429686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427908-428969:-1:exon

position:428969:-1
position: 428969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 3
translation: MGPWRCLLLLPLLAGALRAQQQQFMEYVERRLSLLEERISQWHDQSSRYSAELRDFKNQVLGMLETAEKERETMRSEAESAAVRVDRLEREVDYLETQNPAPPCVEVDETLMEKQVATAKQRKNEKYTKLTDCSDTIASVRAMKILKRFGSTSGLWTKDAAGNSEKIYVFDGTANDTVYVFPRMREFTLFSATRKAARIKLPYPWVGTGHLVYDGHLYYIRQQGPFQVIKFNLANKTVVDSSVFPAEEQIPVFGLSPFTYIEVAADEEGLWAIYATKEDEKNICLAKLDPTSLDIEQMWDTPCPRENAEGAFVVCGALHVVYNTRLPSRSRVQCVFDVSGTLSPEDASLVYFPKRYGSHSSMKYSPRERQIYAWDDGYQIIYRMEMKKKLEV
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(428185..428969,429401..429686,430055..430162))
location: region:428185-430162:-1
so has part: feature:430055-430162:-1:exon
so has part: feature:429401-429686:-1:exon
so has part: feature:428185-428969:-1:exon

XP_040472448.1
type: Protein
SIO_000068: ncbiprotein

position:428185:-1
position: 428185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430162:-1
position: 430162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430055-430162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429401-429686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428185-428969:-1:exon

LOC121098493
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433605..438109)
location: region:433605-438109:-1
so has part: feature:433605-438109:-1:exon
subclass of: SO_0000011

121098493
type: Gene
SIO_000068: ncbigene

position:433605:-1
position: 433605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438109:-1
position: 438109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433605-438109:-1:exon

LOC121098493
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098493
product: uncharacterized LOC121098493
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_005831283.1
SIO_010081: LOC121098493
subclass of: SO_0000673
so part of: LOC121098493
location: complement(join(433605..436926,437935..438109))
location: region:433605-438109:-1
so has part: feature:437935-438109:-1:exon
so has part: feature:433605-436926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437935-438109:-1:exon

position:437935:-1
position: 437935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433605-436926:-1:exon

position:436926:-1
position: 436926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098494
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442050..446658)
location: region:442050-446658:-1
so has part: feature:442050-446658:-1:exon
subclass of: SO_0000010

121098494
type: Gene
SIO_000068: ncbigene

position:442050:-1
position: 442050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446658:-1
position: 446658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442050-446658:-1:exon

LOC121098494
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098494
product: cyclin-dependent kinase inhibitor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040616515.1
SIO_010081: LOC121098494
subclass of: SO_0000673
so part of: LOC121098494
location: complement(join(442050..443473,443999..444409,446637..446658))
location: region:442050-446658:-1
so has part: feature:446637-446658:-1:exon
so has part: feature:443999-444409:-1:exon
so has part: feature:442050-443473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446637-446658:-1:exon

position:446637:-1
position: 446637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443999-444409:-1:exon

position:443999:-1
position: 443999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444409:-1
position: 444409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442050-443473:-1:exon

position:443473:-1
position: 443473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098494
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 1-like
translation: MPLSQSKAGQMQCSTKACRNLFGPVDHHQLKNDFEDLMRQHLEEVQERWNFNFETETPLEGQFKWERVFLAEQQSREVHSLVTGISSESRSSLVHKVPPKDHLGRICPEASQQSSEVYRAGSPRGLKRRQTTMKDFYSSKRRMVPDKPKP
SIO_010081: LOC121098494
subclass of: SO_0000673
so part of: LOC121098494
location: complement(join(443424..443473,443999..444401))
location: region:443424-444401:-1
so has part: feature:443999-444401:-1:exon
so has part: feature:443424-443473:-1:exon

XP_040472449.1
type: Protein
SIO_000068: ncbiprotein

position:443424:-1
position: 443424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444401:-1
position: 444401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443999-444401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443424-443473:-1:exon

SRSF3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SRSF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(458011..464082)
location: region:458011-464082:-1
so has part: feature:458011-464082:-1:exon
subclass of: SO_0000010

121098521
type: Gene
SIO_000068: ncbigene

position:458011:-1
position: 458011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464082:-1
position: 464082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458011-464082:-1:exon

SRSF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SRSF3
product: serine and arginine rich splicing factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616578.1
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(458011..458867,459151..459237,460042..460080,462288..462422,462970..463177,463959..464082))
location: region:458011-464082:-1
so has part: feature:463959-464082:-1:exon
so has part: feature:462970-463177:-1:exon
so has part: feature:462288-462422:-1:exon
so has part: feature:460042-460080:-1:exon
so has part: feature:459151-459237:-1:exon
so has part: feature:458011-458867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463959-464082:-1:exon

position:463959:-1
position: 463959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462970-463177:-1:exon

position:462970:-1
position: 462970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463177:-1
position: 463177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462288-462422:-1:exon

position:462288:-1
position: 462288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462422:-1
position: 462422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460042-460080:-1:exon

position:460042:-1
position: 460042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460080:-1
position: 460080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459151-459237:-1:exon

position:459151:-1
position: 459151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459237:-1
position: 459237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:458011-458867:-1:exon

position:458867:-1
position: 458867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRSF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SRSF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 3
translation: MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNERK
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(458840..458867,459151..459237,460042..460080,462288..462422,462970..463175))
location: region:458840-463175:-1
so has part: feature:462970-463175:-1:exon
so has part: feature:462288-462422:-1:exon
so has part: feature:460042-460080:-1:exon
so has part: feature:459151-459237:-1:exon
so has part: feature:458840-458867:-1:exon

XP_040472512.1
type: Protein
SIO_000068: ncbiprotein

position:458840:-1
position: 458840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463175:-1
position: 463175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462970-463175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460042-460080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459151-459237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458840-458867:-1:exon

LOC121098645
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469737..478513)
location: region:469737-478513:-1
so has part: feature:469737-478513:-1:exon
subclass of: SO_0000011

121098645
type: Gene
SIO_000068: ncbigene

position:469737:-1
position: 469737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478513:-1
position: 478513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469737-478513:-1:exon

LOC121098645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098645
product: uncharacterized LOC121098645, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005831316.1
SIO_010081: LOC121098645
subclass of: SO_0000673
so part of: LOC121098645
location: complement(join(469737..471296,471693..471769,475677..475770,477563..478513))
location: region:469737-478513:-1
so has part: feature:477563-478513:-1:exon
so has part: feature:475677-475770:-1:exon
so has part: feature:471693-471769:-1:exon
so has part: feature:469737-471296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477563-478513:-1:exon

position:477563:-1
position: 477563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475677-475770:-1:exon

position:475677:-1
position: 475677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475770:-1
position: 475770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:471693-471769:-1:exon

position:471693:-1
position: 471693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471769:-1
position: 471769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469737-471296:-1:exon

position:471296:-1
position: 471296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098645
product: uncharacterized LOC121098645, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005831315.1
SIO_010081: LOC121098645
subclass of: SO_0000673
so part of: LOC121098645
location: complement(join(469737..471769,475677..475770,477563..478507))
location: region:469737-478507:-1
so has part: feature:477563-478507:-1:exon
so has part: feature:475677-475770:-1:exon
so has part: feature:469737-471769:-1:exon

position:478507:-1
position: 478507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477563-478507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475677-475770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469737-471769:-1:exon

STK38
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 476877..493429
location: region:476877-493429:1
so has part: feature:476877-493429:1:exon
subclass of: SO_0000010

121098643
type: Gene
SIO_000068: ncbigene

position:476877:1
position: 476877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493429:1
position: 493429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476877-493429:1:exon

STK38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: STK38
product: serine/threonine kinase 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616873.1
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(476877..477067,478813..478945,481162..481213,481385..481507,482070..482153,484024..484147,485039..485193,486293..486395,487316..487377,487919..488036,488234..488357,489078..489173,489426..489520,490144..493429)
location: region:476877-493429:1
so has part: feature:476877-477067:1:exon
so has part: feature:478813-478945:1:exon
so has part: feature:481162-481213:1:exon
so has part: feature:481385-481507:1:exon
so has part: feature:482070-482153:1:exon
so has part: feature:484024-484147:1:exon
so has part: feature:485039-485193:1:exon
so has part: feature:486293-486395:1:exon
so has part: feature:487316-487377:1:exon
so has part: feature:487919-488036:1:exon
so has part: feature:488234-488357:1:exon
so has part: feature:489078-489173:1:exon
so has part: feature:489426-489520:1:exon
so has part: feature:490144-493429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476877-477067:1:exon

position:477067:1
position: 477067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478813-478945:1:exon

position:478813:1
position: 478813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478945:1
position: 478945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481162-481213:1:exon

position:481162:1
position: 481162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481213:1
position: 481213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481385-481507:1:exon

position:481385:1
position: 481385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481507:1
position: 481507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:482070-482153:1:exon

position:482070:1
position: 482070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482153:1
position: 482153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484024-484147:1:exon

position:484024:1
position: 484024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484147:1
position: 484147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485039-485193:1:exon

position:485039:1
position: 485039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485193:1
position: 485193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486293-486395:1:exon

position:486293:1
position: 486293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486395:1
position: 486395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:487316-487377:1:exon

position:487316:1
position: 487316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487377:1
position: 487377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:487919-488036:1:exon

position:487919:1
position: 487919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488036:1
position: 488036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:488234-488357:1:exon

position:488234:1
position: 488234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488357:1
position: 488357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:489078-489173:1:exon

position:489078:1
position: 489078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489173:1
position: 489173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:489426-489520:1:exon

position:489426:1
position: 489426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489520:1
position: 489520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:490144-493429:1:exon

position:490144:1
position: 490144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: STK38
product: serine/threonine kinase 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_040616875.1
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(476877..477067,478813..478945,481162..481213,481385..481507,482070..482153,484024..484147,485039..485193,486293..486395,487316..487377,487919..488036,488234..488357,489078..489173,490144..490277)
location: region:476877-490277:1
so has part: feature:476877-477067:1:exon
so has part: feature:478813-478945:1:exon
so has part: feature:481162-481213:1:exon
so has part: feature:481385-481507:1:exon
so has part: feature:482070-482153:1:exon
so has part: feature:484024-484147:1:exon
so has part: feature:485039-485193:1:exon
so has part: feature:486293-486395:1:exon
so has part: feature:487316-487377:1:exon
so has part: feature:487919-488036:1:exon
so has part: feature:488234-488357:1:exon
so has part: feature:489078-489173:1:exon
so has part: feature:490144-490277:1:exon

position:490277:1
position: 490277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476877-477067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478813-478945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481162-481213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481385-481507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482070-482153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484024-484147:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485039-485193:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486293-486395:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487316-487377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487919-488036:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:488234-488357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489078-489173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490144-490277:1:exon

STK38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 38 isoform X1
translation: MAMTGPTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEQMMEEEGLKDEEKRIRRSAHAQKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISDKAKDLILRFCCEWEHRVGASGVEEIKSNPFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTGATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIPSYMKAGK
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(478815..478945,481162..481213,481385..481507,482070..482153,484024..484147,485039..485193,486293..486395,487316..487377,487919..488036,488234..488357,489078..489173,489426..489520,490144..490274)
location: region:478815-490274:1
so has part: feature:478815-478945:1:exon
so has part: feature:481162-481213:1:exon
so has part: feature:481385-481507:1:exon
so has part: feature:482070-482153:1:exon
so has part: feature:484024-484147:1:exon
so has part: feature:485039-485193:1:exon
so has part: feature:486293-486395:1:exon
so has part: feature:487316-487377:1:exon
so has part: feature:487919-488036:1:exon
so has part: feature:488234-488357:1:exon
so has part: feature:489078-489173:1:exon
so has part: feature:489426-489520:1:exon
so has part: feature:490144-490274:1:exon

XP_040472807.1
type: Protein
SIO_000068: ncbiprotein

position:478815:1
position: 478815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490274:1
position: 490274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478815-478945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481162-481213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481385-481507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482070-482153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484024-484147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485039-485193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486293-486395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487316-487377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487919-488036:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488234-488357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489078-489173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489426-489520:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490144-490274:1:exon

STK38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 38 isoform X2
translation: MAMTGPTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEQMMEEEGLKDEEKRIRRSAHAQKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISDKAKDLILRFCCEWEHRVGASGVEEIKSNPFFEGVDWEHIRGNKQPSRD
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(478815..478945,481162..481213,481385..481507,482070..482153,484024..484147,485039..485193,486293..486395,487316..487377,487919..488036,488234..488357,489078..489173,490144..490171)
location: region:478815-490171:1
so has part: feature:478815-478945:1:exon
so has part: feature:481162-481213:1:exon
so has part: feature:481385-481507:1:exon
so has part: feature:482070-482153:1:exon
so has part: feature:484024-484147:1:exon
so has part: feature:485039-485193:1:exon
so has part: feature:486293-486395:1:exon
so has part: feature:487316-487377:1:exon
so has part: feature:487919-488036:1:exon
so has part: feature:488234-488357:1:exon
so has part: feature:489078-489173:1:exon
so has part: feature:490144-490171:1:exon

XP_040472809.1
type: Protein
SIO_000068: ncbiprotein

position:490171:1
position: 490171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478815-478945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481162-481213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481385-481507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482070-482153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484024-484147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485039-485193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486293-486395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487316-487377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487919-488036:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488234-488357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489078-489173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490144-490171:1:exon

KCTD20
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(494415..525310)
location: region:494415-525310:-1
so has part: feature:494415-525310:-1:exon
subclass of: SO_0000010

121098644
type: Gene
SIO_000068: ncbigene

position:494415:-1
position: 494415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525310:-1
position: 525310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494415-525310:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616880.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,525217..525310))
location: region:494415-525310:-1
so has part: feature:525217-525310:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525217-525310:-1:exon

position:525217:-1
position: 525217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

position:503408:-1
position: 503408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503607:-1
position: 503607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

position:502430:-1
position: 502430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502709:-1
position: 502709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

position:501458:-1
position: 501458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501560:-1
position: 501560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

position:500824:-1
position: 500824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500944:-1
position: 500944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

position:499701:-1
position: 499701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499898:-1
position: 499898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

position:499076:-1
position: 499076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499186:-1
position: 499186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

position:497644:-1
position: 497644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040616882.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503609,524879..525115))
location: region:494415-525115:-1
so has part: feature:524879-525115:-1:exon
so has part: feature:503408-503609:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:525115:-1
position: 525115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524879-525115:-1:exon

position:524879:-1
position: 524879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503609:-1:exon

position:503609:-1
position: 503609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040616878.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,521536..521746))
location: region:494415-521746:-1
so has part: feature:521536-521746:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:521746:-1
position: 521746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521536-521746:-1:exon

position:521536:-1
position: 521536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040616879.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,516280..516639))
location: region:494415-516639:-1
so has part: feature:516280-516639:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:516639:-1
position: 516639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516280-516639:-1:exon

position:516280:-1
position: 516280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040616876.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,513005..513133))
location: region:494415-513133:-1
so has part: feature:513005-513133:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:513133:-1
position: 513133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513005-513133:-1:exon

position:513005:-1
position: 513005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040616877.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,507081..507138,513005..513131))
location: region:494415-513131:-1
so has part: feature:513005-513131:-1:exon
so has part: feature:507081-507138:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:513131:-1
position: 513131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513005-513131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507081-507138:-1:exon

position:507081:-1
position: 507081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507138:-1
position: 507138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040616881.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(494415..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,505386..507020))
location: region:494415-507020:-1
so has part: feature:505386-507020:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:494415-497644:-1:exon

position:507020:-1
position: 507020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505386-507020:-1:exon

position:505386:-1
position: 505386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494415-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X1
translation: MSRHSSLRKRNQLLTSRRPSMNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503607,513005..513015))
location: region:497352-513015:-1
so has part: feature:513005-513015:-1:exon
so has part: feature:503408-503607:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472810.1
type: Protein
SIO_000068: ncbiprotein

position:497352:-1
position: 497352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513015:-1
position: 513015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513005-513015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503408-503607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472811.1
type: Protein
SIO_000068: ncbiprotein

position:503558:-1
position: 503558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MNVNSAGGTDWSRNLESSCSVENVTVAVHESEESNVVLGGHSPAAVPRTEGLDSECRHTACPVNPQINSMLSAPEDTHNCHFQDGNKRQSEYFNTQERHGCCTLSSTSNSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNDLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(497352..497644,499076..499186,499701..499898,500824..500944,501458..501560,502430..502709,503408..503558))
location: region:497352-503558:-1
so has part: feature:503408-503558:-1:exon
so has part: feature:502430-502709:-1:exon
so has part: feature:501458-501560:-1:exon
so has part: feature:500824-500944:-1:exon
so has part: feature:499701-499898:-1:exon
so has part: feature:499076-499186:-1:exon
so has part: feature:497352-497644:-1:exon

XP_040472816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503408-503558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502430-502709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501458-501560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500824-500944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499701-499898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499076-499186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497352-497644:-1:exon

ETV7
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ETV7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 525510..532743
location: region:525510-532743:1
so has part: feature:525510-532743:1:exon
subclass of: SO_0000010

121098671
type: Gene
SIO_000068: ncbigene

position:525510:1
position: 525510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532743:1
position: 532743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525510-532743:1:exon

ETV7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ETV7
product: ETS variant transcription factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_040616943.1
SIO_010081: ETV7
subclass of: SO_0000673
so part of: ETV7
location: join(525510..525981,527957..528074,528359..528523,528793..528900,530237..530419,530722..530864,531202..531302,531967..532743)
location: region:525510-532743:1
so has part: feature:525510-525981:1:exon
so has part: feature:527957-528074:1:exon
so has part: feature:528359-528523:1:exon
so has part: feature:528793-528900:1:exon
so has part: feature:530237-530419:1:exon
so has part: feature:530722-530864:1:exon
so has part: feature:531202-531302:1:exon
so has part: feature:531967-532743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525510-525981:1:exon

position:525981:1
position: 525981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527957-528074:1:exon

position:527957:1
position: 527957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528074:1
position: 528074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528359-528523:1:exon

position:528359:1
position: 528359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528523:1
position: 528523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528793-528900:1:exon

position:528793:1
position: 528793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528900:1
position: 528900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530237-530419:1:exon

position:530237:1
position: 530237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530419:1
position: 530419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530722-530864:1:exon

position:530722:1
position: 530722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530864:1
position: 530864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:531202-531302:1:exon

position:531202:1
position: 531202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531302:1
position: 531302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:531967-532743:1:exon

position:531967:1
position: 531967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETV7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ETV7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor ETV7
translation: MQGNMAVSSSRPIAAALLPSPSQASHTPTSEGEIFRLPGRLRIQPSLWSKDDVIHWLRWAEKEYSLRQTDESKFEMNGKALCILTKDDFRHRAPSSGDVLYEILQYIKTQRRALVRSPLLNSAFREARSTEEGPARSAEAGAGFSCLDRAEQPVSRRHAEPLNLSCHSSEGRCMADTICSSTTLSSPVDGKIADCRLLWDYMYQLLSDSRYEPYIKWADKEAKVFRVVNPNGLAQLWGNHKNRMNMTYEKMSRALRHYYKLNIIKKEPGQKLLFRFLKTPGEIIHEKSSKLEQLESEDQEDLQEDALELSP
SIO_010081: ETV7
subclass of: SO_0000673
so part of: ETV7
location: join(525976..525981,527957..528074,528359..528523,528793..528900,530237..530419,530722..530864,531202..531302,531967..532078)
location: region:525976-532078:1
so has part: feature:525976-525981:1:exon
so has part: feature:527957-528074:1:exon
so has part: feature:528359-528523:1:exon
so has part: feature:528793-528900:1:exon
so has part: feature:530237-530419:1:exon
so has part: feature:530722-530864:1:exon
so has part: feature:531202-531302:1:exon
so has part: feature:531967-532078:1:exon

XP_040472877.1
type: Protein
SIO_000068: ncbiprotein

position:525976:1
position: 525976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532078:1
position: 532078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525976-525981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527957-528074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528359-528523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528793-528900:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530237-530419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530722-530864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531202-531302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531967-532078:1:exon

LOC121098676
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534487..541224
location: region:534487-541224:1
so has part: feature:534487-541224:1:exon
subclass of: SO_0000010

121098676
type: Gene
SIO_000068: ncbigene

position:534487:1
position: 534487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541224:1
position: 541224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534487-541224:1:exon

LOC121098676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098676
product: uncharacterized LOC121098676
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616947.1
SIO_010081: LOC121098676
subclass of: SO_0000673
so part of: LOC121098676
location: join(534487..535092,537911..538632,539309..539446,539815..539876,540149..540412,540780..541224)
location: region:534487-541224:1
so has part: feature:534487-535092:1:exon
so has part: feature:537911-538632:1:exon
so has part: feature:539309-539446:1:exon
so has part: feature:539815-539876:1:exon
so has part: feature:540149-540412:1:exon
so has part: feature:540780-541224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534487-535092:1:exon

position:535092:1
position: 535092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537911-538632:1:exon

position:537911:1
position: 537911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538632:1
position: 538632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:539309-539446:1:exon

position:539309:1
position: 539309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539446:1
position: 539446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539815-539876:1:exon

position:539815:1
position: 539815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539876:1
position: 539876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540149-540412:1:exon

position:540149:1
position: 540149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540412:1
position: 540412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540780-541224:1:exon

position:540780:1
position: 540780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121098676
translation: MQALAGEKPWQDMGRQPSGKILSLDRQGAKKVLEIYVKRSLSCCENSLMAKKKFQERAGGRGRKAGGLQRSKSDFSKYSCAKHGPRKDQEEQPKAPDLDEALDENSKAPGEVPKEELEPKRKSTKNSSQGKTQRTWFKSFLNVIFKKSPEDQKESAGQKAKQKDAKAPHSSKTEGAKRSGGDWSTSPPLGRALKKRPSLKKVFSFKKHVEEERGEAAAGARAKRPSCLPLRHIQAPATAAEVEQPDGYYAQVSEEIGLIVQGSESQGSRVRGCEEPPRLASTDGVDEAIRRIVALLQSAGDELDRQVKEDARLRMFFRDMSYSSFKNLADAYVRKEMTASRPDINPQEIQFAFTVHLTAKVAGICNQAVNRIMGFGTRYLEDSFAPLSYSKILQNREKFSTDNCESPD
SIO_010081: LOC121098676
subclass of: SO_0000673
so part of: LOC121098676
location: join(537915..538632,539309..539446,539815..539876,540149..540412,540780..540824)
location: region:537915-540824:1
so has part: feature:537915-538632:1:exon
so has part: feature:539309-539446:1:exon
so has part: feature:539815-539876:1:exon
so has part: feature:540149-540412:1:exon
so has part: feature:540780-540824:1:exon

XP_040472881.1
type: Protein
SIO_000068: ncbiprotein

position:537915:1
position: 537915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540824:1
position: 540824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537915-538632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539309-539446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539815-539876:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540149-540412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540780-540824:1:exon

PNPLA1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PNPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 546054..556712
location: region:546054-556712:1
so has part: feature:546054-556712:1:exon
subclass of: SO_0000010

121098755
type: Gene
SIO_000068: ncbigene

position:546054:1
position: 546054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556712:1
position: 556712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546054-556712:1:exon

PNPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PNPLA1
product: patatin like phospholipase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617063.1
SIO_010081: PNPLA1
subclass of: SO_0000673
so part of: PNPLA1
location: join(546054..546701,549530..549762,550829..550894,552171..552383,552752..552812,552899..553039,553350..553449,553959..556712)
location: region:546054-556712:1
so has part: feature:546054-546701:1:exon
so has part: feature:549530-549762:1:exon
so has part: feature:550829-550894:1:exon
so has part: feature:552171-552383:1:exon
so has part: feature:552752-552812:1:exon
so has part: feature:552899-553039:1:exon
so has part: feature:553350-553449:1:exon
so has part: feature:553959-556712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546054-546701:1:exon

position:546701:1
position: 546701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549530-549762:1:exon

position:549530:1
position: 549530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549762:1
position: 549762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550829-550894:1:exon

position:550829:1
position: 550829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550894:1
position: 550894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552171-552383:1:exon

position:552171:1
position: 552171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552383:1
position: 552383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552752-552812:1:exon

position:552752:1
position: 552752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552812:1
position: 552812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:552899-553039:1:exon

position:552899:1
position: 552899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553039:1
position: 553039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553350-553449:1:exon

position:553350:1
position: 553350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553449:1
position: 553449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:553959-556712:1:exon

position:553959:1
position: 553959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PNPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: omega-hydroxyceramide transacylase
translation: MAEEGLRGSSTPFSLSFSGSGFLALYQVGVVQSLLELAPELLKSACKVYGSSAGSLIAAAVVCGIDIDDLKEFFFAMAKEARRTILGPLSPKCSLMANIKTVLERMLPEDSYQLASGRLHISLTRVADGQNVIASEFSSKEELIQALLCSCFLPIYCGFIPPSYRGVRYVDGGFTGLQPVSSLEEAVITVSPFTGELDICPRDCPAIFFCFQIFNGSIQISIENLCRISYALFPPSTMVLNDIFSQGYQDTALFLYRNNAFGFNYFNSNFCFASMCGKNDFAQSNRTRTGLRKRVLQYPLPCFLPGLALWKKEQITGLQDPLSKVLLQPYRLPAFFRKGLQKMWRLLGGISSMVNWFQKLLQTAVPGLPKRAMART
SIO_010081: PNPLA1
subclass of: SO_0000673
so part of: PNPLA1
location: join(546500..546701,549530..549762,550829..550894,552171..552383,552752..552812,552899..553039,553350..553449,553959..554073)
location: region:546500-554073:1
so has part: feature:546500-546701:1:exon
so has part: feature:549530-549762:1:exon
so has part: feature:550829-550894:1:exon
so has part: feature:552171-552383:1:exon
so has part: feature:552752-552812:1:exon
so has part: feature:552899-553039:1:exon
so has part: feature:553350-553449:1:exon
so has part: feature:553959-554073:1:exon

XP_040472997.1
type: Protein
SIO_000068: ncbiprotein

position:546500:1
position: 546500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554073:1
position: 554073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546500-546701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549530-549762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550829-550894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552171-552383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552752-552812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552899-553039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553350-553449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553959-554073:1:exon

LOC121098711
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(556843..565613)
location: region:556843-565613:-1
so has part: feature:556843-565613:-1:exon
subclass of: SO_0000010

121098711
type: Gene
SIO_000068: ncbigene

position:556843:-1
position: 556843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565613:-1
position: 565613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556843-565613:-1:exon

LOC121098711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098711
product: omega-hydroxyceramide transacylase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040616999.1
SIO_010081: LOC121098711
subclass of: SO_0000673
so part of: LOC121098711
location: complement(join(556843..557520,559466..559687,560192..560252,560339..560548,561059..561124,561524..561744,562385..563481,565487..565613))
location: region:556843-565613:-1
so has part: feature:565487-565613:-1:exon
so has part: feature:562385-563481:-1:exon
so has part: feature:561524-561744:-1:exon
so has part: feature:561059-561124:-1:exon
so has part: feature:560339-560548:-1:exon
so has part: feature:560192-560252:-1:exon
so has part: feature:559466-559687:-1:exon
so has part: feature:556843-557520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565487-565613:-1:exon

position:565487:-1
position: 565487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562385-563481:-1:exon

position:562385:-1
position: 562385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563481:-1
position: 563481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561524-561744:-1:exon

position:561524:-1
position: 561524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561744:-1
position: 561744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561059-561124:-1:exon

position:561059:-1
position: 561059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561124:-1
position: 561124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560339-560548:-1:exon

position:560339:-1
position: 560339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560548:-1
position: 560548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:560192-560252:-1:exon

position:560192:-1
position: 560192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560252:-1
position: 560252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559466-559687:-1:exon

position:559466:-1
position: 559466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559687:-1
position: 559687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:556843-557520:-1:exon

position:557520:-1
position: 557520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: omega-hydroxyceramide transacylase-like isoform X1
translation: MKINGNEGRPFSVLFRGCSFLIIYELGVSVALQNLSPDILKSASRIYGASSGSIIATLVLCDCDLEEIKLSFFNTVQFSSLGHFPGGKVLKILRDSLNKYLPTNAHELVSGKLHVILTRVHDWRSVTVSEFASKEDLIQAITCSCFIPLYFGFFPPTYHGVRYVDGELGMWRANFTSRTTITVSAFAGEYDICPKDSPAAFFNFQLSDCILQISKRNICRLQYIFQLPTYQVLDQFYIHGYQDTVSFLKRLSDFGVNYLDEDFMLSLGNESCQKGERTLHWKPETRLLCSRGTDLEDVTEENPGTIRAADEGGEEVPHHLLHRQKGPCQLQKNISDPAAPFDPSSFFKEKKSIWQPSLQTDTKLH
SIO_010081: LOC121098711
subclass of: SO_0000673
so part of: LOC121098711
location: complement(join(557399..557520,559466..559687,560192..560252,560339..560548,561059..561124,561524..561744,562385..562580))
location: region:557399-562580:-1
so has part: feature:562385-562580:-1:exon
so has part: feature:561524-561744:-1:exon
so has part: feature:561059-561124:-1:exon
so has part: feature:560339-560548:-1:exon
so has part: feature:560192-560252:-1:exon
so has part: feature:559466-559687:-1:exon
so has part: feature:557399-557520:-1:exon

XP_040472933.1
type: Protein
SIO_000068: ncbiprotein

position:557399:-1
position: 557399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562580:-1
position: 562580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562385-562580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561524-561744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561059-561124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560339-560548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560192-560252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559466-559687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557399-557520:-1:exon

LOC121098711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098711
product: omega-hydroxyceramide transacylase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040617001.1
SIO_010081: LOC121098711
subclass of: SO_0000673
so part of: LOC121098711
location: complement(join(558839..559364,559466..559687,560192..560252,560339..560548,561059..561124,561524..561744,562385..563481,565487..565613))
location: region:558839-565613:-1
so has part: feature:565487-565613:-1:exon
so has part: feature:562385-563481:-1:exon
so has part: feature:561524-561744:-1:exon
so has part: feature:561059-561124:-1:exon
so has part: feature:560339-560548:-1:exon
so has part: feature:560192-560252:-1:exon
so has part: feature:559466-559687:-1:exon
so has part: feature:558839-559364:-1:exon

position:558839:-1
position: 558839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565487-565613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562385-563481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561524-561744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561059-561124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560339-560548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560192-560252:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559466-559687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558839-559364:-1:exon

position:559364:-1
position: 559364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: omega-hydroxyceramide transacylase-like isoform X2
translation: MKINGNEGRPFSVLFRGCSFLIIYELGVSVALQNLSPDILKSASRIYGASSGSIIATLVLCDCDLEEIKLSFFNTVQFSSLGHFPGGKVLKILRDSLNKYLPTNAHELVSGKLHVILTRVHDWRSVTVSEFASKEDLIQAITCSCFIPLYFGFFPPTYHGVRYVDGELGMWRANFTSRTTITVSAFAGEYDICPKDSPAAFFNFQLSDCILQISKRNICRLQYIFQLPTYQVLDQFYIHGYQDTVSFLKRLSDFGVNYLDEDFMLSLGNESCQKGERTLHWKPETRLLCSRGTDLEDVTEENPGTIRAADEGGEEVPHHLLHRQKGSSRTSGLGESPLLGQWLLARPHAELVGEG
SIO_010081: LOC121098711
subclass of: SO_0000673
so part of: LOC121098711
location: complement(join(559273..559364,559466..559687,560192..560252,560339..560548,561059..561124,561524..561744,562385..562580))
location: region:559273-562580:-1
so has part: feature:562385-562580:-1:exon
so has part: feature:561524-561744:-1:exon
so has part: feature:561059-561124:-1:exon
so has part: feature:560339-560548:-1:exon
so has part: feature:560192-560252:-1:exon
so has part: feature:559466-559687:-1:exon
so has part: feature:559273-559364:-1:exon

XP_040472935.1
type: Protein
SIO_000068: ncbiprotein

position:559273:-1
position: 559273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562385-562580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561524-561744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561059-561124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560339-560548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560192-560252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559466-559687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559273-559364:-1:exon

LOC121098535
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 600449..618499
location: region:600449-618499:1
so has part: feature:600449-618499:1:exon
subclass of: SO_0000010

121098535
type: Gene
SIO_000068: ncbigene

position:600449:1
position: 600449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618499:1
position: 618499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600449-618499:1:exon

LOC121098535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098535
product: potassium voltage-gated channel subfamily A member 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040616622.1
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: join(600449..604005,612347..618499)
location: region:600449-618499:1
so has part: feature:600449-604005:1:exon
so has part: feature:612347-618499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600449-604005:1:exon

position:604005:1
position: 604005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612347-618499:1:exon

position:612347:1
position: 612347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098535
product: potassium voltage-gated channel subfamily A member 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040616620.1
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: join(600449..604005,612384..618499)
location: region:600449-618499:1
so has part: feature:600449-604005:1:exon
so has part: feature:612384-618499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600449-604005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612384-618499:1:exon

position:612384:1
position: 612384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098535
product: potassium voltage-gated channel subfamily A member 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040616621.1
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: join(600449..604005,612384..612506,613091..618499)
location: region:600449-618499:1
so has part: feature:600449-604005:1:exon
so has part: feature:612384-612506:1:exon
so has part: feature:613091-618499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600449-604005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612384-612506:1:exon

position:612506:1
position: 612506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:613091-618499:1:exon

position:613091:1
position: 613091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 3-like
translation: MDERRSLLYSPAASSASRHPRGGSTSHHNLGYTEQLPPAAPQPPPDQEEEEGEEGEEGSMTVVGGGGGDPLLEEPQHPHPLLGGDRYDHPPTPAAVPAGQPAGGGEHECCERVVINISGLRFETQLKTLAQFPETLLGDPRKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFIREEQRPLPDKEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDDHDYEGTGGTFGTGGGPLPPDVFTNSSSSANSMVSSFTDPFFVVETLCIIWFSFELLVRFFACPSKATFSKNIMNIIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPSSGFSSIPDAFWWAVVTMTTVGYGDMHPITIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYMHVGSCQHLSSSEEMRKARSNSTLSKSEYMVIEEGGINHSAFKQAAFKTGNCTTTNNPNCVNIKKIFTDV
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: 600616..602367
location: region:600616-602367:1
so has part: feature:600616-602367:1:exon

XP_040472554.1
type: Protein
SIO_000068: ncbiprotein

position:600616:1
position: 600616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602367:1
position: 602367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600616-602367:1:exon

LOC121098535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 3-like
translation: MDERRSLLYSPAASSASRHPRGGSTSHHNLGYTEQLPPAAPQPPPDQEEEEGEEGEEGSMTVVGGGGGDPLLEEPQHPHPLLGGDRYDHPPTPAAVPAGQPAGGGEHECCERVVINISGLRFETQLKTLAQFPETLLGDPRKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFIREEQRPLPDKEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDDHDYEGTGGTFGTGGGPLPPDVFTNSSSSANSMVSSFTDPFFVVETLCIIWFSFELLVRFFACPSKATFSKNIMNIIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPSSGFSSIPDAFWWAVVTMTTVGYGDMHPITIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYMHVGSCQHLSSSEEMRKARSNSTLSKSEYMVIEEGGINHSAFKQAAFKTGNCTTTNNPNCVNIKKIFTDV
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: 600616..602367
location: region:600616-602367:1
so has part: feature:600616-602367:1:exon

XP_040472555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600616-602367:1:exon

LOC121098535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 3-like
translation: MDERRSLLYSPAASSASRHPRGGSTSHHNLGYTEQLPPAAPQPPPDQEEEEGEEGEEGSMTVVGGGGGDPLLEEPQHPHPLLGGDRYDHPPTPAAVPAGQPAGGGEHECCERVVINISGLRFETQLKTLAQFPETLLGDPRKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFIREEQRPLPDKEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDDHDYEGTGGTFGTGGGPLPPDVFTNSSSSANSMVSSFTDPFFVVETLCIIWFSFELLVRFFACPSKATFSKNIMNIIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPSSGFSSIPDAFWWAVVTMTTVGYGDMHPITIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYMHVGSCQHLSSSEEMRKARSNSTLSKSEYMVIEEGGINHSAFKQAAFKTGNCTTTNNPNCVNIKKIFTDV
SIO_010081: LOC121098535
subclass of: SO_0000673
so part of: LOC121098535
location: 600616..602367
location: region:600616-602367:1
so has part: feature:600616-602367:1:exon

XP_040472556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600616-602367:1:exon

LOC121098720
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 630250..638293
location: region:630250-638293:1
so has part: feature:630250-638293:1:exon
subclass of: SO_0000010

121098720
type: Gene
SIO_000068: ncbigene

position:630250:1
position: 630250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638293:1
position: 638293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630250-638293:1:exon

LOC121098720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098720
product: potassium voltage-gated channel subfamily A member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617012.1
SIO_010081: LOC121098720
subclass of: SO_0000673
so part of: LOC121098720
location: 630250..638293
location: region:630250-638293:1
so has part: feature:630250-638293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630250-638293:1:exon

LOC121098720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 2
translation: MTVATGDPADEAAALPGHPQDTYNPETDHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGLSHPPYSNSSMGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADESESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
SIO_010081: LOC121098720
subclass of: SO_0000673
so part of: LOC121098720
location: 630697..632196
location: region:630697-632196:1
so has part: feature:630697-632196:1:exon

XP_040472946.1
type: Protein
SIO_000068: ncbiprotein

position:630697:1
position: 630697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632196:1
position: 632196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630697-632196:1:exon

KCNA10
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: KCNA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 670348..675797
location: region:670348-675797:1
so has part: feature:670348-675797:1:exon
subclass of: SO_0000010

121098507
type: Gene
SIO_000068: ncbigene

position:670348:1
position: 670348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675797:1
position: 675797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670348-675797:1:exon

KCNA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCNA10
product: potassium voltage-gated channel subfamily A member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040616560.1
SIO_010081: KCNA10
subclass of: SO_0000673
so part of: KCNA10
location: join(670348..670370,673971..675797)
location: region:670348-675797:1
so has part: feature:670348-670370:1:exon
so has part: feature:673971-675797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670348-670370:1:exon

position:670370:1
position: 670370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673971-675797:1:exon

position:673971:1
position: 673971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCNA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 10
translation: MMDVSSWKEMEVALVSFDNADQIVEDPCYSNDLSPTSQSRKGHPSCANLLSNLRILINSENANNETIFSRFSAEFSEHLVGERVGMDEGDQRVIINIAGLRFETWLKTLNQFPETLLGDPEKRMRYFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDVFADEITFYELGDEAMDQFREDEGFIKDPETLLPTNDFHRQFWLLFEYPESSSAARGVALVSVLVIVISIIIFCMETLPEFREEREFKSAQELSKNLTDTLLAHSTFTDPFFVIETACIIWFSFELFVRFIVCPSKTEFFRNIMNIIDIVSIIPYFVTLTTELIQQSELNGQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPQSHFSSIPDGFWWAVVTMTTVGYGDMCPTTLGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQILPGEVERILTSVVTGNGSMESLNKTNGGYPRDKAKK
SIO_010081: KCNA10
subclass of: SO_0000673
so part of: KCNA10
location: 674045..675595
location: region:674045-675595:1
so has part: feature:674045-675595:1:exon

XP_040472494.1
type: Protein
SIO_000068: ncbiprotein

position:674045:1
position: 674045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675595:1
position: 675595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674045-675595:1:exon

LOC121098508
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(680300..684359)
location: region:680300-684359:-1
so has part: feature:680300-684359:-1:exon
subclass of: SO_0000010

121098508
type: Gene
SIO_000068: ncbigene

position:680300:-1
position: 680300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684359:-1
position: 684359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680300-684359:-1:exon

LOC121098508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098508
product: embryonic pepsinogen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040616561.1
SIO_010081: LOC121098508
subclass of: SO_0000673
so part of: LOC121098508
location: complement(join(680300..680549,680746..680844,681105..681249,681745..681858,682440..682639,682762..682880,683366..683483,683793..683955,684296..684359))
location: region:680300-684359:-1
so has part: feature:684296-684359:-1:exon
so has part: feature:683793-683955:-1:exon
so has part: feature:683366-683483:-1:exon
so has part: feature:682762-682880:-1:exon
so has part: feature:682440-682639:-1:exon
so has part: feature:681745-681858:-1:exon
so has part: feature:681105-681249:-1:exon
so has part: feature:680746-680844:-1:exon
so has part: feature:680300-680549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684296-684359:-1:exon

position:684296:-1
position: 684296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683793-683955:-1:exon

position:683793:-1
position: 683793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683955:-1
position: 683955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:683366-683483:-1:exon

position:683366:-1
position: 683366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683483:-1
position: 683483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682762-682880:-1:exon

position:682762:-1
position: 682762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682880:-1
position: 682880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682440-682639:-1:exon

position:682440:-1
position: 682440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682639:-1
position: 682639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681745-681858:-1:exon

position:681745:-1
position: 681745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681858:-1
position: 681858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681105-681249:-1:exon

position:681105:-1
position: 681105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681249:-1
position: 681249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680746-680844:-1:exon

position:680746:-1
position: 680746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680844:-1
position: 680844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:680300-680549:-1:exon

position:680549:-1
position: 680549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic pepsinogen-like
translation: MRFLVLLCAASALSQGVTRLPLERGKKLREVLREKGLLHSFFQRHHYDIGTKFPHAFPNGTKVATEPLLNTLDVEYYGTISIGTPPQNFTVVFDTGSSNLWVPSISCTSLACQNHKMFNPLLSSTYKSTGQNLTIQYGTGKMEGIVGSDTVSVASLVDTDQLFGLSTTEPGQFFVHVAFDGILGLGYPNLAADEITPVFDNMVNERLLEENVFSVYLSRETTGSVVIFGGIDESYFTGSINWISVSYQGYWQISMDSIIVNSQEVACGGGCQAIVDTGTSLVAGPPSGISNIQRAVGARQDRDGEYNVNCSSIAAMPDVIFVIDGVQYPVSPLAYTEQNDQGPCISSFQNTSGDLWILGDVFIRVYYSIFDRDNNRVGLAKAI
SIO_010081: LOC121098508
subclass of: SO_0000673
so part of: LOC121098508
location: complement(join(680412..680549,680746..680844,681105..681249,681745..681858,682440..682639,682762..682880,683366..683483,683793..683955,684296..684351))
location: region:680412-684351:-1
so has part: feature:684296-684351:-1:exon
so has part: feature:683793-683955:-1:exon
so has part: feature:683366-683483:-1:exon
so has part: feature:682762-682880:-1:exon
so has part: feature:682440-682639:-1:exon
so has part: feature:681745-681858:-1:exon
so has part: feature:681105-681249:-1:exon
so has part: feature:680746-680844:-1:exon
so has part: feature:680412-680549:-1:exon

XP_040472495.1
type: Protein
SIO_000068: ncbiprotein

position:680412:-1
position: 680412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684351:-1
position: 684351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684296-684351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683793-683955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683366-683483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682762-682880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682440-682639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681745-681858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681105-681249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680746-680844:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:680412-680549:-1:exon

PROK1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PROK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(688552..696044)
location: region:688552-696044:-1
so has part: feature:688552-696044:-1:exon
subclass of: SO_0000010

121098745
type: Gene
SIO_000068: ncbigene

position:688552:-1
position: 688552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696044:-1
position: 696044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688552-696044:-1:exon

PROK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PROK1
product: prokineticin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040617042.1
SIO_010081: PROK1
subclass of: SO_0000673
so part of: PROK1
location: complement(join(688552..690268,691342..691467,693489..694426,695593..696044))
location: region:688552-696044:-1
so has part: feature:695593-696044:-1:exon
so has part: feature:693489-694426:-1:exon
so has part: feature:691342-691467:-1:exon
so has part: feature:688552-690268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695593-696044:-1:exon

position:695593:-1
position: 695593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693489-694426:-1:exon

position:693489:-1
position: 693489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694426:-1
position: 694426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:691342-691467:-1:exon

position:691342:-1
position: 691342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691467:-1
position: 691467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688552-690268:-1:exon

position:690268:-1
position: 690268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PROK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PROK1
product: prokineticin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040617043.1
SIO_010081: PROK1
subclass of: SO_0000673
so part of: PROK1
location: complement(join(688552..689794,690148..690268,691342..691467,693489..695275))
location: region:688552-695275:-1
so has part: feature:693489-695275:-1:exon
so has part: feature:691342-691467:-1:exon
so has part: feature:690148-690268:-1:exon
so has part: feature:688552-689794:-1:exon

position:695275:-1
position: 695275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693489-695275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691342-691467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690148-690268:-1:exon

position:690148:-1
position: 690148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688552-689794:-1:exon

position:689794:-1
position: 689794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PROK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PROK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prokineticin-1
translation: MGWLLHTLCLLLLLTSCPCAIITGACERDPQCGSGTCCAVSLWLRGLRMCTPLGQEGDECHPFSHKVPFFGKRQHHTCPCLPNFICARFLDSRYRCSADFKNIDF
SIO_010081: PROK1
subclass of: SO_0000673
so part of: PROK1
location: complement(join(690149..690268,691342..691467,693489..693560))
location: region:690149-693560:-1
so has part: feature:693489-693560:-1:exon
so has part: feature:691342-691467:-1:exon
so has part: feature:690149-690268:-1:exon

XP_040472976.1
type: Protein
SIO_000068: ncbiprotein

position:690149:-1
position: 690149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693560:-1
position: 693560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693489-693560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691342-691467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690149-690268:-1:exon

PROK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PROK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prokineticin-1
translation: MGWLLHTLCLLLLLTSCPCAIITGACERDPQCGSGTCCAVSLWLRGLRMCTPLGQEGDECHPFSHKVPFFGKRQHHTCPCLPNFICARFLDSRYRCSADFKNIDF
SIO_010081: PROK1
subclass of: SO_0000673
so part of: PROK1
location: complement(join(690149..690268,691342..691467,693489..693560))
location: region:690149-693560:-1
so has part: feature:693489-693560:-1:exon
so has part: feature:691342-691467:-1:exon
so has part: feature:690149-690268:-1:exon

XP_040472977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693489-693560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691342-691467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690149-690268:-1:exon

LAMTOR5
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LAMTOR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 697084..699132
location: region:697084-699132:1
so has part: feature:697084-699132:1:exon
subclass of: SO_0000010

121098713
type: Gene
SIO_000068: ncbigene

position:697084:1
position: 697084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699132:1
position: 699132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697084-699132:1:exon

LAMTOR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LAMTOR5
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617004.1
SIO_010081: LAMTOR5
subclass of: SO_0000673
so part of: LAMTOR5
location: join(697084..697213,697383..697444,698122..698239,698765..699132)
location: region:697084-699132:1
so has part: feature:697084-697213:1:exon
so has part: feature:697383-697444:1:exon
so has part: feature:698122-698239:1:exon
so has part: feature:698765-699132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697084-697213:1:exon

position:697213:1
position: 697213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697383-697444:1:exon

position:697383:1
position: 697383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697444:1
position: 697444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:698122-698239:1:exon

position:698122:1
position: 698122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698239:1
position: 698239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:698765-699132:1:exon

position:698765:1
position: 698765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMTOR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LAMTOR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR5
translation: MEGTLEQHLEDTMKSPAVVGVLCTDSQGLNLGCRGTLSDEHAGIISVLAQQAAKLTSDPTDTPVVCLESDSGNIMIQKHDSITVAVHKLAS
SIO_010081: LAMTOR5
subclass of: SO_0000673
so part of: LAMTOR5
location: join(697179..697213,697383..697444,698122..698239,698765..698825)
location: region:697179-698825:1
so has part: feature:697179-697213:1:exon
so has part: feature:697383-697444:1:exon
so has part: feature:698122-698239:1:exon
so has part: feature:698765-698825:1:exon

XP_040472938.1
type: Protein
SIO_000068: ncbiprotein

position:697179:1
position: 697179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698825:1
position: 698825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697179-697213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697383-697444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698122-698239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698765-698825:1:exon

SLC16A4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699912..712023
location: region:699912-712023:1
so has part: feature:699912-712023:1:exon
subclass of: SO_0000010

121098484
type: Gene
SIO_000068: ncbigene

position:699912:1
position: 699912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712023:1
position: 712023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699912-712023:1:exon

SLC16A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC16A4
product: solute carrier family 16 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040616489.1
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(699912..700851,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706637,707407..707500,711669..712023)
location: region:699912-712023:1
so has part: feature:699912-700851:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706637:1:exon
so has part: feature:707407-707500:1:exon
so has part: feature:711669-712023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699912-700851:1:exon

position:700851:1
position: 700851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

position:701468:1
position: 701468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701568:1
position: 701568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

position:702441:1
position: 702441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702573:1
position: 702573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

position:703270:1
position: 703270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703413:1
position: 703413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

position:703893:1
position: 703893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704054:1
position: 704054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

position:704572:1
position: 704572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705120:1
position: 705120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706637:1:exon

position:706426:1
position: 706426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706637:1
position: 706637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707407-707500:1:exon

position:707407:1
position: 707407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707500:1
position: 707500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:711669-712023:1:exon

position:711669:1
position: 711669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC16A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC16A4
product: solute carrier family 16 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040616488.1
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(699914..700851,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..707521)
location: region:699914-707521:1
so has part: feature:699914-700851:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-707521:1:exon

position:699914:1
position: 699914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707521:1
position: 707521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699914-700851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-707521:1:exon

SLC16A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC16A4
product: solute carrier family 16 member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040616493.1
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700761..700952,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706637,707407..707500,711669..712023)
location: region:700761-712023:1
so has part: feature:700761-700952:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706637:1:exon
so has part: feature:707407-707500:1:exon
so has part: feature:711669-712023:1:exon

position:700761:1
position: 700761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700761-700952:1:exon

position:700952:1
position: 700952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707407-707500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711669-712023:1:exon

SLC16A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC16A4
product: solute carrier family 16 member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040616492.1
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700761..700952,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..707521)
location: region:700761-707521:1
so has part: feature:700761-700952:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-707521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700761-700952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-707521:1:exon

SLC16A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 5 isoform X2
translation: MCRFGAPWEGQTPLASPARSEGPDFGLPGERREEEPEALAAGRSPGAADGGWAWGVVLHFFLVNVLVIGMLKTFGIFFVAFQEEVGGSSEQVSWIGSIMSSLRFLGAPLVAVVCRRLGERPTSIIGAGLVGGGCLLSTLATSVPFLCVSMGLLLGVGFACLYQAAAVMTAKRCRTRLAFSNAIARSGMGLTFLIAPFTQLLIDFYGWQGTLLIFGGIMLNLVPSSMLLRPVSTQPPQRCSANDQDGGFLMAKKDSDTLGGCLDETTRAETRLCSARDLSATEGLMTSHGRDVSGPGNTSALGRLEKSPKDSCSPEIATEAKRSHPSLPATEKKNSQPLLDFSPLKDPIFCIFTWSFLFSHLAYFVPIFHLVARAKTLGISSMDASYLISVAGITETVSQLLSGWVADQNWTKKYHYHVAYLVLGGITNLLCPLATTFPLLMTYAVAFAIFCGGFMALILPVLVDLVGVQKLHSYLGFAAFFAGIAAVGGPPLAGWLYDYTQTYVCSFLFAGACALVSPISFFFEPSAQKWKLKKANLSNGPRLG
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700767..700851,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706637,707407..707500,711669..711823)
location: region:700767-711823:1
so has part: feature:700767-700851:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706637:1:exon
so has part: feature:707407-707500:1:exon
so has part: feature:711669-711823:1:exon

XP_040472423.1
type: Protein
SIO_000068: ncbiprotein

position:700767:1
position: 700767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711823:1
position: 711823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700767-700851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707407-707500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711669-711823:1:exon

SLC16A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 5 isoform X1
translation: MCRFGAPWEGQTPLASPARSEGPDFGLPGERREEEPEALAAGRSPGAADGGWAWGVVLHFFLVNVLVIGMLKTFGIFFVAFQEEVGGSSEQVSWIGSIMSSLRFLGAPLVAVVCRRLGERPTSIIGAGLVGGGCLLSTLATSVPFLCVSMGLLLGVGFACLYQAAAVMTAKRCRTRLAFSNAIARSGMGLTFLIAPFTQLLIDFYGWQGTLLIFGGIMLNLVPSSMLLRPVSTQPPQRCSANDQDGGFLMAKKDSDTLGGCLDETTRAETRLCSARDLSATEGLMTSHGRDVSGPGNTSALGRLEKSPKDSCSPEIATEAKRSHPSLPATEKKNSQPLLDFSPLKDPIFCIFTWSFLFSHLAYFVPIFHLVARAKTLGISSMDASYLISVAGITETVSQLLSGWVADQNWTKKYHYHVAYLVLGGITNLLCPLATTFPLLMTYAVAFAIFCGGFMALILPVLVSRRFHSKKKKKKKDTVGGISHSIPKLSQPPFMKANYPGAAADLHDRALPPSLPTLSPTSLPTGIHGPDATEALGARCRFLTTWLC
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700767..700851,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706898)
location: region:700767-706898:1
so has part: feature:700767-700851:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706898:1:exon

XP_040472422.1
type: Protein
SIO_000068: ncbiprotein

position:706898:1
position: 706898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700767-700851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706898:1:exon

SLC16A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 5 isoform X5
translation: MQQQGGERREEEPEALAAGRSPGAADGGWAWGVVLHFFLVNVLVIGMLKTFGIFFVAFQEEVGGSSEQVSWIGSIMSSLRFLGAPLVAVVCRRLGERPTSIIGAGLVGGGCLLSTLATSVPFLCVSMGLLLGVGFACLYQAAAVMTAKRCRTRLAFSNAIARSGMGLTFLIAPFTQLLIDFYGWQGTLLIFGGIMLNLVPSSMLLRPVSTQPPQRCSANDQDGGFLMAKKDSDTLGGCLDETTRAETRLCSARDLSATEGLMTSHGRDVSGPGNTSALGRLEKSPKDSCSPEIATEAKRSHPSLPATEKKNSQPLLDFSPLKDPIFCIFTWSFLFSHLAYFVPIFHLVARAKTLGISSMDASYLISVAGITETVSQLLSGWVADQNWTKKYHYHVAYLVLGGITNLLCPLATTFPLLMTYAVAFAIFCGGFMALILPVLVDLVGVQKLHSYLGFAAFFAGIAAVGGPPLAGWLYDYTQTYVCSFLFAGACALVSPISFFFEPSAQKWKLKKANLSNGPRLG
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700937..700952,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706637,707407..707500,711669..711823)
location: region:700937-711823:1
so has part: feature:700937-700952:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706637:1:exon
so has part: feature:707407-707500:1:exon
so has part: feature:711669-711823:1:exon

XP_040472427.1
type: Protein
SIO_000068: ncbiprotein

position:700937:1
position: 700937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700937-700952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707407-707500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711669-711823:1:exon

SLC16A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 5 isoform X4
translation: MQQQGGERREEEPEALAAGRSPGAADGGWAWGVVLHFFLVNVLVIGMLKTFGIFFVAFQEEVGGSSEQVSWIGSIMSSLRFLGAPLVAVVCRRLGERPTSIIGAGLVGGGCLLSTLATSVPFLCVSMGLLLGVGFACLYQAAAVMTAKRCRTRLAFSNAIARSGMGLTFLIAPFTQLLIDFYGWQGTLLIFGGIMLNLVPSSMLLRPVSTQPPQRCSANDQDGGFLMAKKDSDTLGGCLDETTRAETRLCSARDLSATEGLMTSHGRDVSGPGNTSALGRLEKSPKDSCSPEIATEAKRSHPSLPATEKKNSQPLLDFSPLKDPIFCIFTWSFLFSHLAYFVPIFHLVARAKTLGISSMDASYLISVAGITETVSQLLSGWVADQNWTKKYHYHVAYLVLGGITNLLCPLATTFPLLMTYAVAFAIFCGGFMALILPVLVSRRFHSKKKKKKKDTVGGISHSIPKLSQPPFMKANYPGAAADLHDRALPPSLPTLSPTSLPTGIHGPDATEALGARCRFLTTWLC
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(700937..700952,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706898)
location: region:700937-706898:1
so has part: feature:700937-700952:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706898:1:exon

XP_040472426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:700937-700952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706898:1:exon

SLC16A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC16A4
product: solute carrier family 16 member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040616490.1
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(701055..701170,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..707521)
location: region:701055-707521:1
so has part: feature:701055-701170:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-707521:1:exon

position:701055:1
position: 701055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701055-701170:1:exon

position:701170:1
position: 701170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-707521:1:exon

SLC16A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC16A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 5 isoform X3
translation: MLERQEGERREEEPEALAAGRSPGAADGGWAWGVVLHFFLVNVLVIGMLKTFGIFFVAFQEEVGGSSEQVSWIGSIMSSLRFLGAPLVAVVCRRLGERPTSIIGAGLVGGGCLLSTLATSVPFLCVSMGLLLGVGFACLYQAAAVMTAKRCRTRLAFSNAIARSGMGLTFLIAPFTQLLIDFYGWQGTLLIFGGIMLNLVPSSMLLRPVSTQPPQRCSANDQDGGFLMAKKDSDTLGGCLDETTRAETRLCSARDLSATEGLMTSHGRDVSGPGNTSALGRLEKSPKDSCSPEIATEAKRSHPSLPATEKKNSQPLLDFSPLKDPIFCIFTWSFLFSHLAYFVPIFHLVARAKTLGISSMDASYLISVAGITETVSQLLSGWVADQNWTKKYHYHVAYLVLGGITNLLCPLATTFPLLMTYAVAFAIFCGGFMALILPVLVSRRFHSKKKKKKKDTVGGISHSIPKLSQPPFMKANYPGAAADLHDRALPPSLPTLSPTSLPTGIHGPDATEALGARCRFLTTWLC
SIO_010081: SLC16A4
subclass of: SO_0000673
so part of: SLC16A4
location: join(701152..701170,701468..701568,702441..702573,703270..703413,703893..704054,704572..705120,706426..706898)
location: region:701152-706898:1
so has part: feature:701152-701170:1:exon
so has part: feature:701468-701568:1:exon
so has part: feature:702441-702573:1:exon
so has part: feature:703270-703413:1:exon
so has part: feature:703893-704054:1:exon
so has part: feature:704572-705120:1:exon
so has part: feature:706426-706898:1:exon

XP_040472424.1
type: Protein
SIO_000068: ncbiprotein

position:701152:1
position: 701152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701152-701170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701468-701568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702441-702573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703270-703413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703893-704054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704572-705120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706426-706898:1:exon

LOC121098485
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(705720..716902)
location: region:705720-716902:-1
so has part: feature:705720-716902:-1:exon
subclass of: SO_0000011

121098485
type: Gene
SIO_000068: ncbigene

position:705720:-1
position: 705720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716902:-1
position: 716902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705720-716902:-1:exon

LOC121098485
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098485
product: uncharacterized LOC121098485
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005831282.1
SIO_010081: LOC121098485
subclass of: SO_0000673
so part of: LOC121098485
location: complement(join(705720..706634,707534..710477,712220..712469,714200..714386,716331..716902))
location: region:705720-716902:-1
so has part: feature:716331-716902:-1:exon
so has part: feature:714200-714386:-1:exon
so has part: feature:712220-712469:-1:exon
so has part: feature:707534-710477:-1:exon
so has part: feature:705720-706634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716331-716902:-1:exon

position:716331:-1
position: 716331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714200-714386:-1:exon

position:714200:-1
position: 714200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714386:-1
position: 714386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712220-712469:-1:exon

position:712220:-1
position: 712220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712469:-1
position: 712469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707534-710477:-1:exon

position:707534:-1
position: 707534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710477:-1
position: 710477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:705720-706634:-1:exon

position:706634:-1
position: 706634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM15
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: RBM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721681..729793)
location: region:721681-729793:-1
so has part: feature:721681-729793:-1:exon
subclass of: SO_0000010

121098483
type: Gene
SIO_000068: ncbigene

position:721681:-1
position: 721681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729793:-1
position: 729793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721681-729793:-1:exon

RBM15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: RBM15
product: RNA binding motif protein 15
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616487.1
SIO_010081: RBM15
subclass of: SO_0000673
so part of: RBM15
location: complement(721681..729793)
location: region:721681-729793:-1
so has part: feature:721681-729793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721681-729793:-1:exon

RBM15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: RBM15
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein 15
translation: MKGKERSPAKAKRSRGGGGGEDSASSSSSARGERSSKKPSGSGGSNGSGGKAAAAAASNESNSGSSRRGPHPDKAARAGSREYEAGAAAAGGGGSRHGYGGGKTAEASRSSSSRGGGGESRAAAAAPSSSSSSSEAGGGGEYKTLKISELGSALSDEAVEDGLFHEFKRFGDVSVKISRLPPGTGAADERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVGGGGGESRRRSSRSPALLDKESPYGTAAVGVAAAAAAAVRHPPAGATQRALSPAGSGGALGYRDYRLQQLALGRLPPPPPLPRELERERDYGGFYEARVRPAYGLERVAGVAAAGGFRGGGGGAGAAGEEEISPEDDQRANRTLFLGNLDITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLDMAHRAKLAMSGKVLLRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDFADTEHRYQQPYLQPLPLPPPAHYELVAEAAAFGAHRGAPPDPLRGARDRTPPLLYRDRDRDLYPDTEWVPPPPPVRDRSNRAVAYDPLESLERRRDGWSLERDRGERELGSSSRDQPRKRRLAEDGGRHLDRSPDSERSSSSRKRHCLATTSPPDRSPELLGGRERYSSDPERSSSRLLLLERPSPIRESRRGSLERGQNEKRDRKNSAERERKHRASVAAAAQECKSPAKKDERATEGGGGGSRLKPPPQKQQQDGASQAGGAPKLCLAWQGMLLLKNSNFPSNMHLLQGDLGVASSLLVEGATGGKVAQLKITQRLRLDQPKLDEVNRRIKVAGPNGYAILLAVPGASDNRSAAGASEAATTSTQRPLRNLVSYLKQKQAAGVISLPVGGNKDKENSGVLHAFPPCDFSQQFLDSTAKALAKSEDDYLVMIIVRGAS
SIO_010081: RBM15
subclass of: SO_0000673
so part of: RBM15
location: complement(726796..729676)
location: region:726796-729676:-1
so has part: feature:726796-729676:-1:exon

XP_040472421.1
type: Protein
SIO_000068: ncbiprotein

position:726796:-1
position: 726796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729676:-1
position: 729676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726796-729676:-1:exon

KCNC4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: KCNC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(755069..777485)
location: region:755069-777485:-1
so has part: feature:755069-777485:-1:exon
subclass of: SO_0000010

121098753
type: Gene
SIO_000068: ncbigene

position:755069:-1
position: 755069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777485:-1
position: 777485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755069-777485:-1:exon

KCNC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCNC4
product: potassium voltage-gated channel subfamily C member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617060.1
SIO_010081: KCNC4
subclass of: SO_0000673
so part of: KCNC4
location: complement(join(755069..756385,768580..768765,770319..771255,776076..777485))
location: region:755069-777485:-1
so has part: feature:776076-777485:-1:exon
so has part: feature:770319-771255:-1:exon
so has part: feature:768580-768765:-1:exon
so has part: feature:755069-756385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:776076-777485:-1:exon

position:776076:-1
position: 776076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770319-771255:-1:exon

position:770319:-1
position: 770319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771255:-1
position: 771255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768580-768765:-1:exon

position:768580:-1
position: 768580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768765:-1
position: 768765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755069-756385:-1:exon

position:756385:-1
position: 756385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCNC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily C member 4 isoform X2
translation: MISSVCVSSYRGRKSGNKPPSKTCLKEEMGKGEESDKITINVGGTRHETYKSTLRTLPGTRLAWLADPDAQSNFDFDGKSNEFFFDRHPGIFSYVLNYYRTGKLHCPADICGPLFEEELTYWGIDETDVEPCCWMTYRQHRDAEEALDIFESPEPGGGAGGEEPEEEGGREMALQRLGMDDRPPGAAGAAGGGGCCRNWQPRMWALFEDPYSSKAARVVAFASLFFILVSITTFCLETHEAFNIDVNVTETLVVGNTTTILLTHKVETEPILTYIEGVCVLWFTLEFLVRIICCPDKLLFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAKTSDPRGSDHTHFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMVVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPAPLDSPTYCKSEENSPRNSTQSDTCPLAVEEGAAERKGSDSKQNGEANVVLADEEQPLSPMDEEKRPMRRSSTREKNKKSSTCFLLATGDFSCAADGGIQKDTCQDVLSSSYPQGEVVTFS
SIO_010081: KCNC4
subclass of: SO_0000673
so part of: KCNC4
location: complement(join(756324..756385,768580..768765,770319..771255,776076..776726))
location: region:756324-776726:-1
so has part: feature:776076-776726:-1:exon
so has part: feature:770319-771255:-1:exon
so has part: feature:768580-768765:-1:exon
so has part: feature:756324-756385:-1:exon

XP_040472994.1
type: Protein
SIO_000068: ncbiprotein

position:756324:-1
position: 756324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776726:-1
position: 776726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776076-776726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770319-771255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768580-768765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756324-756385:-1:exon

KCNC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KCNC4
product: potassium voltage-gated channel subfamily C member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617058.1
SIO_010081: KCNC4
subclass of: SO_0000673
so part of: KCNC4
location: complement(join(762550..763000,768580..768765,770319..771255,776076..777485))
location: region:762550-777485:-1
so has part: feature:776076-777485:-1:exon
so has part: feature:770319-771255:-1:exon
so has part: feature:768580-768765:-1:exon
so has part: feature:762550-763000:-1:exon

position:762550:-1
position: 762550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776076-777485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770319-771255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768580-768765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762550-763000:-1:exon

position:763000:-1
position: 763000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KCNC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily C member 4 isoform X1
translation: MISSVCVSSYRGRKSGNKPPSKTCLKEEMGKGEESDKITINVGGTRHETYKSTLRTLPGTRLAWLADPDAQSNFDFDGKSNEFFFDRHPGIFSYVLNYYRTGKLHCPADICGPLFEEELTYWGIDETDVEPCCWMTYRQHRDAEEALDIFESPEPGGGAGGEEPEEEGGREMALQRLGMDDRPPGAAGAAGGGGCCRNWQPRMWALFEDPYSSKAARVVAFASLFFILVSITTFCLETHEAFNIDVNVTETLVVGNTTTILLTHKVETEPILTYIEGVCVLWFTLEFLVRIICCPDKLLFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAKTSDPRGSDHTHFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMVVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPAPLDSPTYCKSEENSPRNSTQSDTCPLAVEEGAAERKGSDSKQNGEANVVLADEEQPLSPMDEEKRPMRRSSTREKNKKSSTCFLLATGDFSCAADGGIQKGYGKSRSLSSIDGVAGSTVGLAPLTSRCSSPCPLRRPCSPVPSIL
SIO_010081: KCNC4
subclass of: SO_0000673
so part of: KCNC4
location: complement(join(762864..763000,768580..768765,770319..771255,776076..776726))
location: region:762864-776726:-1
so has part: feature:776076-776726:-1:exon
so has part: feature:770319-771255:-1:exon
so has part: feature:768580-768765:-1:exon
so has part: feature:762864-763000:-1:exon

XP_040472992.1
type: Protein
SIO_000068: ncbiprotein

position:762864:-1
position: 762864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776076-776726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770319-771255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768580-768765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762864-763000:-1:exon

SLC6A17
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SLC6A17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782316..805439)
location: region:782316-805439:-1
so has part: feature:782316-805439:-1:exon
subclass of: SO_0000010

121098725
type: Gene
SIO_000068: ncbigene

position:782316:-1
position: 782316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805439:-1
position: 805439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782316-805439:-1:exon

SLC6A17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SLC6A17
product: solute carrier family 6 member 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617019.1
SIO_010081: SLC6A17
subclass of: SO_0000673
so part of: SLC6A17
location: complement(join(782316..786730,787170..787332,787891..788050,788242..788434,788807..788999,789678..789919,790923..791033,792133..792314,793006..793132,793414..793571,797076..797483,805156..805439))
location: region:782316-805439:-1
so has part: feature:805156-805439:-1:exon
so has part: feature:797076-797483:-1:exon
so has part: feature:793414-793571:-1:exon
so has part: feature:793006-793132:-1:exon
so has part: feature:792133-792314:-1:exon
so has part: feature:790923-791033:-1:exon
so has part: feature:789678-789919:-1:exon
so has part: feature:788807-788999:-1:exon
so has part: feature:788242-788434:-1:exon
so has part: feature:787891-788050:-1:exon
so has part: feature:787170-787332:-1:exon
so has part: feature:782316-786730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805156-805439:-1:exon

position:805156:-1
position: 805156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:797076-797483:-1:exon

position:797076:-1
position: 797076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797483:-1
position: 797483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793414-793571:-1:exon

position:793414:-1
position: 793414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793571:-1
position: 793571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793006-793132:-1:exon

position:793006:-1
position: 793006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793132:-1
position: 793132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792133-792314:-1:exon

position:792133:-1
position: 792133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792314:-1
position: 792314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:790923-791033:-1:exon

position:790923:-1
position: 790923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791033:-1
position: 791033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789678-789919:-1:exon

position:789678:-1
position: 789678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789919:-1
position: 789919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:788807-788999:-1:exon

position:788807:-1
position: 788807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788999:-1
position: 788999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:788242-788434:-1:exon

position:788242:-1
position: 788242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788434:-1
position: 788434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787891-788050:-1:exon

position:787891:-1
position: 787891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788050:-1
position: 788050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:787170-787332:-1:exon

position:787170:-1
position: 787170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787332:-1
position: 787332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:782316-786730:-1:exon

position:786730:-1
position: 786730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SLC6A17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent neutral amino acid transporter SLC6A17
translation: MPKNSKVTQREHSSEHVTESVADLLAHEEPVDYKRSVLNVTGETWDKQKDGDEDLDAENRPAWNSKLQYILAQIGYSVGLGNVWRFPYLCQKNGGGAYLVPYLVLLIIIGLPLFFLELAVGQRIRRGSIGVWNYICPRLGGIGYASCLVCFFVGLYYNVIIGWSIFYFFKSFQYPLPWSECPIVKNGSVAVVETECERSSATTYFWYRETLDISNSISESGGLNWKMTLCLLVAWSLVGLAMIKGIQSSGKVMYFSSLFPYVVLVCFLVRGLLLRGAVDGIMHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDATLVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNTNVLSHDLIPPHVNFSHLTAKDYNEMYRVIMTVKEGHFKELGLDACLLEDELNKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMIGTMSGITTPIIDTFKVRKEVFTVGCCIFAFVVGLIFVQRSGNYFVTMFDDYSATLPLTVVVILENIAVAWIYGTKKFMQELTEMLGFRPYQFYYYTWKYVSPICMAVLMTASIIQLGVSPPGYSAWIREEAAEKFLFYPTWAMAILISLIILASLPLPLVFILRQFHLVSDGSNALSVTYKKGRMMKDISNLEDNDETRFILSKVPSETPSPMPTHRSYLGPGSNSPMEMSSAPNGRYGSGYLLASTPESEL
SIO_010081: SLC6A17
subclass of: SO_0000673
so part of: SLC6A17
location: complement(join(786362..786730,787170..787332,787891..788050,788242..788434,788807..788999,789678..789919,790923..791033,792133..792314,793006..793132,793414..793571,797076..797361))
location: region:786362-797361:-1
so has part: feature:797076-797361:-1:exon
so has part: feature:793414-793571:-1:exon
so has part: feature:793006-793132:-1:exon
so has part: feature:792133-792314:-1:exon
so has part: feature:790923-791033:-1:exon
so has part: feature:789678-789919:-1:exon
so has part: feature:788807-788999:-1:exon
so has part: feature:788242-788434:-1:exon
so has part: feature:787891-788050:-1:exon
so has part: feature:787170-787332:-1:exon
so has part: feature:786362-786730:-1:exon

XP_040472953.1
type: Protein
SIO_000068: ncbiprotein

position:786362:-1
position: 786362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797361:-1
position: 797361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797076-797361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793006-793132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792133-792314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790923-791033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789678-789919:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788807-788999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788242-788434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787891-788050:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:787170-787332:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:786362-786730:-1:exon

LOC121098691
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 817343..826693
location: region:817343-826693:1
so has part: feature:817343-826693:1:exon
subclass of: SO_0000011

121098691
type: Gene
SIO_000068: ncbigene

position:817343:1
position: 817343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826693:1
position: 826693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817343-826693:1:exon

LOC121098691
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098691
product: uncharacterized LOC121098691
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005831323.1
SIO_010081: LOC121098691
subclass of: SO_0000673
so part of: LOC121098691
location: join(817343..817472,820550..826693)
location: region:817343-826693:1
so has part: feature:817343-817472:1:exon
so has part: feature:820550-826693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817343-817472:1:exon

position:817472:1
position: 817472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820550-826693:1:exon

position:820550:1
position: 820550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALX3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ALX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 837484..839968
location: region:837484-839968:1
so has part: feature:837484-839968:1:exon
subclass of: SO_0000010

121098677
type: Gene
SIO_000068: ncbigene

position:837484:1
position: 837484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839968:1
position: 839968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837484-839968:1:exon

ALX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ALX3
product: ALX homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616949.1
SIO_010081: ALX3
subclass of: SO_0000673
so part of: ALX3
location: join(837484..837753,838927..839001,839591..839968)
location: region:837484-839968:1
so has part: feature:837484-837753:1:exon
so has part: feature:838927-839001:1:exon
so has part: feature:839591-839968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837484-837753:1:exon

position:837753:1
position: 837753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838927-839001:1:exon

position:838927:1
position: 838927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839001:1
position: 839001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839591-839968:1:exon

position:839591:1
position: 839591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ALX3
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:839612..839614,aa:OTHER)
product: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
translation: MPASCRAPVKAPGELGCPLAAPLGSLQEHGVPELPEPLGKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEVRDALASPHSTXGFPPPPPPHPFFQLQNNLWPSSGPGSPAGLLPPESIPSPCMSPYPHTHSNITGFMGIPASPGPHPGINSLYSLHSLPPAALGAHPFEPAPEDYKSPTLVPLRMKSKEATSSLLNWAT
SIO_010081: ALX3
subclass of: SO_0000673
so part of: ALX3
location: join(837484..837753,838927..839001,839591..839968)
location: region:837484-839968:1
so has part: feature:837484-837753:1:exon
so has part: feature:838927-839001:1:exon
so has part: feature:839591-839968:1:exon

XP_040472883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837484-837753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838927-839001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839591-839968:1:exon

STRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: STRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(843743..854245)
location: region:843743-854245:-1
so has part: feature:843743-854245:-1:exon
subclass of: SO_0000010

121098599
type: Gene
SIO_000068: ncbigene

position:843743:-1
position: 843743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854245:-1
position: 854245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843743-854245:-1:exon

STRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: STRIP1
product: striatin interacting protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040616791.1
SIO_010081: STRIP1
subclass of: SO_0000673
so part of: STRIP1
location: complement(join(843743..844623,844952..845156,845460..845564,845852..845918,846143..846243,846336..846462,846745..846842,847038..847112,847378..847449,847842..847905,848132..848197,848458..848675,848797..848979,849458..849585,850014..850120,850563..850631,851007..851127,851512..851646,852172..852246,852536..852605,853993..854245))
location: region:843743-854245:-1
so has part: feature:853993-854245:-1:exon
so has part: feature:852536-852605:-1:exon
so has part: feature:852172-852246:-1:exon
so has part: feature:851512-851646:-1:exon
so has part: feature:851007-851127:-1:exon
so has part: feature:850563-850631:-1:exon
so has part: feature:850014-850120:-1:exon
so has part: feature:849458-849585:-1:exon
so has part: feature:848797-848979:-1:exon
so has part: feature:848458-848675:-1:exon
so has part: feature:848132-848197:-1:exon
so has part: feature:847842-847905:-1:exon
so has part: feature:847378-847449:-1:exon
so has part: feature:847038-847112:-1:exon
so has part: feature:846745-846842:-1:exon
so has part: feature:846336-846462:-1:exon
so has part: feature:846143-846243:-1:exon
so has part: feature:845852-845918:-1:exon
so has part: feature:845460-845564:-1:exon
so has part: feature:844952-845156:-1:exon
so has part: feature:843743-844623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853993-854245:-1:exon

position:853993:-1
position: 853993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852536-852605:-1:exon

position:852536:-1
position: 852536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852605:-1
position: 852605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:852172-852246:-1:exon

position:852172:-1
position: 852172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852246:-1
position: 852246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:851512-851646:-1:exon

position:851512:-1
position: 851512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851646:-1
position: 851646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851007-851127:-1:exon

position:851007:-1
position: 851007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851127:-1
position: 851127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:850563-850631:-1:exon

position:850563:-1
position: 850563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850631:-1
position: 850631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:850014-850120:-1:exon

position:850014:-1
position: 850014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850120:-1
position: 850120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:849458-849585:-1:exon

position:849458:-1
position: 849458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849585:-1
position: 849585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:848797-848979:-1:exon

position:848797:-1
position: 848797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848979:-1
position: 848979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:848458-848675:-1:exon

position:848458:-1
position: 848458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848675:-1
position: 848675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:848132-848197:-1:exon

position:848132:-1
position: 848132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848197:-1
position: 848197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:847842-847905:-1:exon

position:847842:-1
position: 847842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847905:-1
position: 847905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:847378-847449:-1:exon

position:847378:-1
position: 847378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847449:-1
position: 847449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:847038-847112:-1:exon

position:847038:-1
position: 847038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847112:-1
position: 847112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:846745-846842:-1:exon

position:846745:-1
position: 846745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846842:-1
position: 846842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:846336-846462:-1:exon

position:846336:-1
position: 846336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846462:-1
position: 846462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:846143-846243:-1:exon

position:846143:-1
position: 846143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846243:-1
position: 846243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:845852-845918:-1:exon

position:845852:-1
position: 845852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845918:-1
position: 845918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:845460-845564:-1:exon

position:845460:-1
position: 845460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845564:-1
position: 845564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:844952-845156:-1:exon

position:844952:-1
position: 844952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845156:-1
position: 845156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:843743-844623:-1:exon

position:844623:-1
position: 844623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: STRIP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: striatin-interacting protein 1
translation: MAAALPRLSLPLPREGGGESSRELGAAEAADMEPGGGAGARGPLPGNNKARGGAAPPGKARDLGRPPRKDSEGYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLLNRKCFEEDFRIHMRDKKWTELDKNQHRTHAMRLLDGLEVTAREKRLRVARAILYVAQGTFGECGSEAEVQAWMRYNIFLLLEVGTFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVRQEAEGDKPEWKSMRQTFRAELGAPLYNNEPFSVMLFGMVTKFCSGHAPHFPMKKVLLLLWKAVLCTLGGFEELQSMKAEKREILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIKQDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPTQHPPSDRITCPKGLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIRTLKLHKYTSIAEVQVHMEDEYLRSPLSGGEEEVEQVPAEILYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPEEMPTTVLQSMKLGVDVNRHKEIIVKAISAVLLLLLKHFKLNHIYQFEYMAQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPYCVVHELPELTAESLEAGDNNQFCWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRASIERFNSRRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQVNYDLWLEREVFSRPISWEELLQ
SIO_010081: STRIP1
subclass of: SO_0000673
so part of: STRIP1
location: complement(join(844376..844623,844952..845156,845460..845564,845852..845918,846143..846243,846336..846462,846745..846842,847038..847112,847378..847449,847842..847905,848132..848197,848458..848675,848797..848979,849458..849585,850014..850120,850563..850631,851007..851127,851512..851646,852172..852246,852536..852605,853993..854209))
location: region:844376-854209:-1
so has part: feature:853993-854209:-1:exon
so has part: feature:852536-852605:-1:exon
so has part: feature:852172-852246:-1:exon
so has part: feature:851512-851646:-1:exon
so has part: feature:851007-851127:-1:exon
so has part: feature:850563-850631:-1:exon
so has part: feature:850014-850120:-1:exon
so has part: feature:849458-849585:-1:exon
so has part: feature:848797-848979:-1:exon
so has part: feature:848458-848675:-1:exon
so has part: feature:848132-848197:-1:exon
so has part: feature:847842-847905:-1:exon
so has part: feature:847378-847449:-1:exon
so has part: feature:847038-847112:-1:exon
so has part: feature:846745-846842:-1:exon
so has part: feature:846336-846462:-1:exon
so has part: feature:846143-846243:-1:exon
so has part: feature:845852-845918:-1:exon
so has part: feature:845460-845564:-1:exon
so has part: feature:844952-845156:-1:exon
so has part: feature:844376-844623:-1:exon

XP_040472725.1
type: Protein
SIO_000068: ncbiprotein

position:844376:-1
position: 844376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854209:-1
position: 854209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853993-854209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852536-852605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852172-852246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:851512-851646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851007-851127:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850563-850631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850014-850120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849458-849585:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848797-848979:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848458-848675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848132-848197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847842-847905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847378-847449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847038-847112:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846745-846842:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:846336-846462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:846143-846243:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:845852-845918:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:845460-845564:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:844952-845156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844376-844623:-1:exon

AHCYL1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AHCYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(854824..883180)
location: region:854824-883180:-1
so has part: feature:854824-883180:-1:exon
subclass of: SO_0000010

121098522
type: Gene
SIO_000068: ncbigene

position:854824:-1
position: 854824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883180:-1
position: 883180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854824-883180:-1:exon

AHCYL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AHCYL1
product: adenosylhomocysteinase like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616580.1
SIO_010081: AHCYL1
subclass of: SO_0000673
so part of: AHCYL1
location: complement(join(854824..856950,857090..857210,857696..857774,858975..859043,859634..859732,859817..859911,861340..861410,861893..861981,863429..863492,863710..863826,863907..864013,864920..865014,865693..865795,866076..866176,866990..867133,867494..867605,882899..883179))
location: region:854824-883179:-1
so has part: feature:882899-883179:-1:exon
so has part: feature:867494-867605:-1:exon
so has part: feature:866990-867133:-1:exon
so has part: feature:866076-866176:-1:exon
so has part: feature:865693-865795:-1:exon
so has part: feature:864920-865014:-1:exon
so has part: feature:863907-864013:-1:exon
so has part: feature:863710-863826:-1:exon
so has part: feature:863429-863492:-1:exon
so has part: feature:861893-861981:-1:exon
so has part: feature:861340-861410:-1:exon
so has part: feature:859817-859911:-1:exon
so has part: feature:859634-859732:-1:exon
so has part: feature:858975-859043:-1:exon
so has part: feature:857696-857774:-1:exon
so has part: feature:857090-857210:-1:exon
so has part: feature:854824-856950:-1:exon

position:883179:-1
position: 883179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882899-883179:-1:exon

position:882899:-1
position: 882899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867494-867605:-1:exon

position:867494:-1
position: 867494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867605:-1
position: 867605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866990-867133:-1:exon

position:866990:-1
position: 866990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867133:-1
position: 867133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866076-866176:-1:exon

position:866076:-1
position: 866076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866176:-1
position: 866176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865693-865795:-1:exon

position:865693:-1
position: 865693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865795:-1
position: 865795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:864920-865014:-1:exon

position:864920:-1
position: 864920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865014:-1
position: 865014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:863907-864013:-1:exon

position:863907:-1
position: 863907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864013:-1
position: 864013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:863710-863826:-1:exon

position:863710:-1
position: 863710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863826:-1
position: 863826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:863429-863492:-1:exon

position:863429:-1
position: 863429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863492:-1
position: 863492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:861893-861981:-1:exon

position:861893:-1
position: 861893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861981:-1
position: 861981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:861340-861410:-1:exon

position:861340:-1
position: 861340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861410:-1
position: 861410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859817-859911:-1:exon

position:859817:-1
position: 859817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859911:-1
position: 859911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:859634-859732:-1:exon

position:859634:-1
position: 859634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859732:-1
position: 859732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:858975-859043:-1:exon

position:858975:-1
position: 858975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859043:-1
position: 859043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:857696-857774:-1:exon

position:857696:-1
position: 857696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857774:-1
position: 857774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:857090-857210:-1:exon

position:857090:-1
position: 857090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857210:-1
position: 857210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:854824-856950:-1:exon

position:856950:-1
position: 856950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AHCYL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AHCYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosylhomocysteine hydrolase-like protein 1
translation: MSVPEPAGGDEVKQAKEVEDAEKYSFMATVTKAPKKQIQFADDMQEFTKFPTKTGRRSLSRSISQSSTDSYSSAASYTDSSDDEVSPREKQQTNSKGSSNFCVKNIKQAEFGRREIEIAEQDMSALISLRKRAQGEKPLAGAKIVGCTHITAQTAVLIETLCALGAQCRWSACNIYSTQNEVAAALAEAGVAVFAWKGESEDDFWWCIDRCVNVDGWQANMILDDGGDLTHWVYKKYPNVFKKIRGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCAALKALGAIVYVTEIDPICALQACMDGFRVVKLSEVIRQVDVVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVTSLRTPELTWERVRSQVDHVIWPDGKRVVLLAEGRLLNLSCSTVPTFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPSFDAHLTELTDDQAKYLGLNKNGPFKPNYYRY
SIO_010081: AHCYL1
subclass of: SO_0000673
so part of: AHCYL1
location: complement(join(856944..856950,857090..857210,857696..857774,858975..859043,859634..859732,859817..859911,861340..861410,861893..861981,863429..863492,863710..863826,863907..864013,864920..865014,865693..865795,866076..866176,866990..867133,867494..867605,882899..883006))
location: region:856944-883006:-1
so has part: feature:882899-883006:-1:exon
so has part: feature:867494-867605:-1:exon
so has part: feature:866990-867133:-1:exon
so has part: feature:866076-866176:-1:exon
so has part: feature:865693-865795:-1:exon
so has part: feature:864920-865014:-1:exon
so has part: feature:863907-864013:-1:exon
so has part: feature:863710-863826:-1:exon
so has part: feature:863429-863492:-1:exon
so has part: feature:861893-861981:-1:exon
so has part: feature:861340-861410:-1:exon
so has part: feature:859817-859911:-1:exon
so has part: feature:859634-859732:-1:exon
so has part: feature:858975-859043:-1:exon
so has part: feature:857696-857774:-1:exon
so has part: feature:857090-857210:-1:exon
so has part: feature:856944-856950:-1:exon

XP_040472514.1
type: Protein
SIO_000068: ncbiprotein

position:856944:-1
position: 856944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883006:-1
position: 883006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882899-883006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867494-867605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866990-867133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866076-866176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865693-865795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:864920-865014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:863907-864013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:863710-863826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863429-863492:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861893-861981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:861340-861410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859817-859911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:859634-859732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858975-859043:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:857696-857774:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857090-857210:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:856944-856950:-1:exon

AHCYL1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: AHCYL1
product: adenosylhomocysteinase like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005831289.1
SIO_010081: AHCYL1
so part of: AHCYL1
location: complement(join(857696..857774,858975..859043,859634..859732,859817..859911,861340..861410,861893..861981,863429..863511,863710..863826,863907..864013,864920..865014,865693..865795,866076..866176,866990..867133,867494..867605,882899..883180))
location: region:857696-883180:-1
so has part: feature:882899-883180:-1:exon
so has part: feature:867494-867605:-1:exon
so has part: feature:866990-867133:-1:exon
so has part: feature:866076-866176:-1:exon
so has part: feature:865693-865795:-1:exon
so has part: feature:864920-865014:-1:exon
so has part: feature:863907-864013:-1:exon
so has part: feature:863710-863826:-1:exon
so has part: feature:863429-863511:-1:exon
so has part: feature:861893-861981:-1:exon
so has part: feature:861340-861410:-1:exon
so has part: feature:859817-859911:-1:exon
so has part: feature:859634-859732:-1:exon
so has part: feature:858975-859043:-1:exon
so has part: feature:857696-857774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882899-883180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867494-867605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866990-867133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866076-866176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865693-865795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:864920-865014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:863907-864013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:863710-863826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863429-863511:-1:exon

position:863511:-1
position: 863511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:861893-861981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:861340-861410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859817-859911:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:859634-859732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858975-859043:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:857696-857774:-1:exon

CSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: CSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887915..896251)
location: region:887915-896251:-1
so has part: feature:887915-896251:-1:exon
subclass of: SO_0000010

121098605
type: Gene
SIO_000068: ncbigene

position:887915:-1
position: 887915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896251:-1
position: 896251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887915-896251:-1:exon

CSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CSF1
product: colony stimulating factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_040616811.1
SIO_010081: CSF1
subclass of: SO_0000673
so part of: CSF1
location: complement(join(887915..889396,889729..889781,889871..889926,890197..890324,892011..892188,892453..892632,892947..893009,894801..894932,896206..896251))
location: region:887915-896251:-1
so has part: feature:896206-896251:-1:exon
so has part: feature:894801-894932:-1:exon
so has part: feature:892947-893009:-1:exon
so has part: feature:892453-892632:-1:exon
so has part: feature:892011-892188:-1:exon
so has part: feature:890197-890324:-1:exon
so has part: feature:889871-889926:-1:exon
so has part: feature:889729-889781:-1:exon
so has part: feature:887915-889396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896206-896251:-1:exon

position:896206:-1
position: 896206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894801-894932:-1:exon

position:894801:-1
position: 894801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894932:-1
position: 894932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892947-893009:-1:exon

position:892947:-1
position: 892947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893009:-1
position: 893009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892453-892632:-1:exon

position:892453:-1
position: 892453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892632:-1
position: 892632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892011-892188:-1:exon

position:892011:-1
position: 892011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892188:-1
position: 892188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890197-890324:-1:exon

position:890197:-1
position: 890197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890324:-1
position: 890324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889871-889926:-1:exon

position:889871:-1
position: 889871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889926:-1
position: 889926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889729-889781:-1:exon

position:889729:-1
position: 889729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889781:-1
position: 889781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:887915-889396:-1:exon

position:889396:-1
position: 889396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CSF1
product: colony stimulating factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040616810.1
SIO_010081: CSF1
subclass of: SO_0000673
so part of: CSF1
location: complement(join(887915..889396,889729..889781,889871..889926,890197..891035,892011..892188,892453..892632,892947..893009,894801..894932,896206..896251))
location: region:887915-896251:-1
so has part: feature:896206-896251:-1:exon
so has part: feature:894801-894932:-1:exon
so has part: feature:892947-893009:-1:exon
so has part: feature:892453-892632:-1:exon
so has part: feature:892011-892188:-1:exon
so has part: feature:890197-891035:-1:exon
so has part: feature:889871-889926:-1:exon
so has part: feature:889729-889781:-1:exon
so has part: feature:887915-889396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896206-896251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894801-894932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892947-893009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892453-892632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892011-892188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890197-891035:-1:exon

position:891035:-1
position: 891035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889871-889926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889729-889781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887915-889396:-1:exon

CSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage colony-stimulating factor 1 isoform X2
translation: MPRLGAKACLLRCTVLSSLLLLLVCSIHETEQNSYCQQIITERHLAELEELADTQMQHPGRVSFKFINKMQLNNSVCYVKAAFPLLGKILERTEFKENSSNAKKMQMVRRMYSRIDENVDPCIREEDDEERKLSQMCFEEFTTSPYEMLVLVKQFFQDINQLLQNKETFEKDCSQVYRRTCLGPREAGFSPEQRRKEPAVREGRREPLIYITVASVVAVLLAMGGLLFYKCRSRVLERPLEDGDCDPEEPERRALQGARGCPELETQDL
SIO_010081: CSF1
subclass of: SO_0000673
so part of: CSF1
location: complement(join(889730..889781,889871..889926,890197..890324,892011..892188,892453..892632,892947..893009,894801..894932,896206..896226))
location: region:889730-896226:-1
so has part: feature:896206-896226:-1:exon
so has part: feature:894801-894932:-1:exon
so has part: feature:892947-893009:-1:exon
so has part: feature:892453-892632:-1:exon
so has part: feature:892011-892188:-1:exon
so has part: feature:890197-890324:-1:exon
so has part: feature:889871-889926:-1:exon
so has part: feature:889730-889781:-1:exon

XP_040472745.1
type: Protein
SIO_000068: ncbiprotein

position:889730:-1
position: 889730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896226:-1
position: 896226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896206-896226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894801-894932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892947-893009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892453-892632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892011-892188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890197-890324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889871-889926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889730-889781:-1:exon

CSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage colony-stimulating factor 1 isoform X1
translation: MPRLGAKACLLRCTVLSSLLLLLVCSIHETEQNSYCQQIITERHLAELEELADTQMQHPGRVSFKFINKMQLNNSVCYVKAAFPLLGKILERTEFKENSSNAKKMQMVRRMYSRIDENVDPCIREEDDEERKLSQMCFEEFTTSPYEMLVLVKQFFQDINQLLQNKETFEKDCSQVYRRTCLGPREAGFSPGVGTDPDCNCLSPAPPSATQPSLPAATHAGSEVAPASTQVPYSLLHATLADLDTPSQPPSSMDSGSGTEEVLGAGVGDVASVPSPAMQQTAPADSAEALLDPAGTLGLAAVDVSILRGDGELVEGGTETVADHLPQDPAQQQGASVLPDHAGGLRITMLAASPSAGSVGDGARIRPAEASEPVMQLRFSRMAPEPRGQVPGGPGDGARVRGWGLSRLREPQDGGAGPSFDSGFVPSTEQRRKEPAVREGRREPLIYITVASVVAVLLAMGGLLFYKCRSRVLERPLEDGDCDPEEPERRALQGARGCPELETQDL
SIO_010081: CSF1
subclass of: SO_0000673
so part of: CSF1
location: complement(join(889730..889781,889871..889926,890197..891035,892011..892188,892453..892632,892947..893009,894801..894932,896206..896226))
location: region:889730-896226:-1
so has part: feature:896206-896226:-1:exon
so has part: feature:894801-894932:-1:exon
so has part: feature:892947-893009:-1:exon
so has part: feature:892453-892632:-1:exon
so has part: feature:892011-892188:-1:exon
so has part: feature:890197-891035:-1:exon
so has part: feature:889871-889926:-1:exon
so has part: feature:889730-889781:-1:exon

XP_040472744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:896206-896226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894801-894932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892947-893009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892453-892632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892011-892188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890197-891035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889871-889926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889730-889781:-1:exon

LOC121098746
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(909630..911915)
location: region:909630-911915:-1
so has part: feature:909630-911915:-1:exon
subclass of: SO_0000011

121098746
type: Gene
SIO_000068: ncbigene

position:909630:-1
position: 909630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911915:-1
position: 911915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909630-911915:-1:exon

LOC121098746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098746
product: uncharacterized LOC121098746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005831346.1
SIO_010081: LOC121098746
subclass of: SO_0000673
so part of: LOC121098746
location: complement(join(909630..910863,911825..911915))
location: region:909630-911915:-1
so has part: feature:911825-911915:-1:exon
so has part: feature:909630-910863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911825-911915:-1:exon

position:911825:-1
position: 911825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:909630-910863:-1:exon

position:910863:-1
position: 910863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPS8L3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: EPS8L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 918646..925027
location: region:918646-925027:1
so has part: feature:918646-925027:1:exon
subclass of: SO_0000010

121098678
type: Gene
SIO_000068: ncbigene

position:918646:1
position: 918646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925027:1
position: 925027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918646-925027:1:exon

EPS8L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: EPS8L3
product: EPS8 like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616950.1
SIO_010081: EPS8L3
subclass of: SO_0000673
so part of: EPS8L3
location: join(918646..918728,918838..918911,918997..919061,919172..919327,920909..921058,921136..921212,921726..921862,921958..922031,922139..922256,922343..922407,923075..923149,923261..923409,923525..923737,923842..923932,924057..924179,924273..924352,924459..924591,924680..925027)
location: region:918646-925027:1
so has part: feature:918646-918728:1:exon
so has part: feature:918838-918911:1:exon
so has part: feature:918997-919061:1:exon
so has part: feature:919172-919327:1:exon
so has part: feature:920909-921058:1:exon
so has part: feature:921136-921212:1:exon
so has part: feature:921726-921862:1:exon
so has part: feature:921958-922031:1:exon
so has part: feature:922139-922256:1:exon
so has part: feature:922343-922407:1:exon
so has part: feature:923075-923149:1:exon
so has part: feature:923261-923409:1:exon
so has part: feature:923525-923737:1:exon
so has part: feature:923842-923932:1:exon
so has part: feature:924057-924179:1:exon
so has part: feature:924273-924352:1:exon
so has part: feature:924459-924591:1:exon
so has part: feature:924680-925027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:918646-918728:1:exon

position:918728:1
position: 918728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918838-918911:1:exon

position:918838:1
position: 918838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918911:1
position: 918911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918997-919061:1:exon

position:918997:1
position: 918997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919061:1
position: 919061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:919172-919327:1:exon

position:919172:1
position: 919172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919327:1
position: 919327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:920909-921058:1:exon

position:920909:1
position: 920909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921058:1
position: 921058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:921136-921212:1:exon

position:921136:1
position: 921136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921212:1
position: 921212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:921726-921862:1:exon

position:921726:1
position: 921726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921862:1
position: 921862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921958-922031:1:exon

position:921958:1
position: 921958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922031:1
position: 922031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:922139-922256:1:exon

position:922139:1
position: 922139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922256:1
position: 922256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:922343-922407:1:exon

position:922343:1
position: 922343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922407:1
position: 922407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:923075-923149:1:exon

position:923075:1
position: 923075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923149:1
position: 923149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:923261-923409:1:exon

position:923261:1
position: 923261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923409:1
position: 923409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:923525-923737:1:exon

position:923525:1
position: 923525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923737:1
position: 923737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:923842-923932:1:exon

position:923842:1
position: 923842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923932:1
position: 923932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:924057-924179:1:exon

position:924057:1
position: 924057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924179:1
position: 924179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:924273-924352:1:exon

position:924273:1
position: 924273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924352:1
position: 924352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:924459-924591:1:exon

position:924459:1
position: 924459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924591:1
position: 924591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:924680-925027:1:exon

position:924680:1
position: 924680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPS8L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: EPS8L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor kinase substrate 8-like protein 3
translation: MGDPFRCWDKFPSRSEYDSSSPLPRSNSFARPSGKSIYNQRKDYSQTLLKPQSDFQHHVEHLLTVRLERDIRSADDCLEHLKVLEAQGRVWGQDLILQVKDQELVLRDVESKEEVDTYPLGSVQGCSAMLGGCGYDSVLAISVRERNPPGTSVLLFQCQHLGAETLKGSLEKLVKRWKEEQRSQYGHRSSLDSPPSLPPPYGQGPYVAPNRWAETPEPDFHAPPQRGLPSSDYSSVDTQRMPRTDPPGQVTSSVDRDVEVLNHVLSDLELFMVQLKTALGMDGTTNVKKKKKMKKKGALPSKGDYTEFFQKVKYGLNLLGRTHQHVRDPDPSQLLHLIFTALSFVLQHCPSPSLPAAVEAPLLLPEALELLEKTLHQDHHRTWKTLGIAWNKPRAEYPNGNLVPHYIPVFSDGWLPPPMEQVQLGGGQDLPPPASVSPSHSQHATPSLLPAQSPLTGRRDSPGQALPAQGLVQALYEFQGRNPQELSVRVGDTLQVLDQRNKWWLVQNGWGDKGYVPSNIVEPLGQGHRGGDSASQDSPPNLHPNSSPAEVTAWLKDKGFSRITVRCLGVLTGSQLLQMSPAELQAVCPEEWRRVLFKLSSARTSLGMDPRD
SIO_010081: EPS8L3
subclass of: SO_0000673
so part of: EPS8L3
location: join(918688..918728,918838..918911,918997..919061,919172..919327,920909..921058,921136..921212,921726..921862,921958..922031,922139..922256,922343..922407,923075..923149,923261..923409,923525..923737,923842..923932,924057..924179,924273..924352,924459..924591,924680..924697)
location: region:918688-924697:1
so has part: feature:918688-918728:1:exon
so has part: feature:918838-918911:1:exon
so has part: feature:918997-919061:1:exon
so has part: feature:919172-919327:1:exon
so has part: feature:920909-921058:1:exon
so has part: feature:921136-921212:1:exon
so has part: feature:921726-921862:1:exon
so has part: feature:921958-922031:1:exon
so has part: feature:922139-922256:1:exon
so has part: feature:922343-922407:1:exon
so has part: feature:923075-923149:1:exon
so has part: feature:923261-923409:1:exon
so has part: feature:923525-923737:1:exon
so has part: feature:923842-923932:1:exon
so has part: feature:924057-924179:1:exon
so has part: feature:924273-924352:1:exon
so has part: feature:924459-924591:1:exon
so has part: feature:924680-924697:1:exon

XP_040472884.1
type: Protein
SIO_000068: ncbiprotein

position:918688:1
position: 918688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924697:1
position: 924697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918688-918728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918838-918911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918997-919061:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919172-919327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920909-921058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921136-921212:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921726-921862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921958-922031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922139-922256:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:922343-922407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:923075-923149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923261-923409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923525-923737:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923842-923932:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:924057-924179:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:924273-924352:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:924459-924591:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:924680-924697:1:exon

LOC121098526
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(925513..928045)
location: region:925513-928045:-1
so has part: feature:925513-928045:-1:exon
subclass of: SO_0000010

121098526
type: Gene
SIO_000068: ncbigene

position:925513:-1
position: 925513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928045:-1
position: 928045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925513-928045:-1:exon

LOC121098526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098526
product: glutathione S-transferase Mu 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616601.1
SIO_010081: LOC121098526
subclass of: SO_0000673
so part of: LOC121098526
location: complement(join(925513..925743,925866..925976,926058..926153,926272..926372,926568..926649,926741..926805,926917..926992,927922..928045))
location: region:925513-928045:-1
so has part: feature:927922-928045:-1:exon
so has part: feature:926917-926992:-1:exon
so has part: feature:926741-926805:-1:exon
so has part: feature:926568-926649:-1:exon
so has part: feature:926272-926372:-1:exon
so has part: feature:926058-926153:-1:exon
so has part: feature:925866-925976:-1:exon
so has part: feature:925513-925743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927922-928045:-1:exon

position:927922:-1
position: 927922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926917-926992:-1:exon

position:926917:-1
position: 926917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926992:-1
position: 926992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926741-926805:-1:exon

position:926741:-1
position: 926741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926805:-1
position: 926805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:926568-926649:-1:exon

position:926568:-1
position: 926568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926649:-1
position: 926649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926272-926372:-1:exon

position:926272:-1
position: 926272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926372:-1
position: 926372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926058-926153:-1:exon

position:926058:-1
position: 926058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926153:-1
position: 926153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:925866-925976:-1:exon

position:925866:-1
position: 925866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925976:-1
position: 925976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:925513-925743:-1:exon

position:925743:-1
position: 925743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase Mu 1-like
translation: MAVLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTKLTQSNAIMRYIARKHKMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQLPGKLKLFSNFLGDRKWFAGEKLTFVDFLMFDVLEQNRIFEPKCLEPFKNLKDFMDRFGALEKVAAYMKSSRFLKMPINNKMAKWGNKKE
SIO_010081: LOC121098526
subclass of: SO_0000673
so part of: LOC121098526
location: complement(join(925648..925743,925866..925976,926058..926153,926272..926372,926568..926649,926741..926805,926917..926992,927922..927954))
location: region:925648-927954:-1
so has part: feature:927922-927954:-1:exon
so has part: feature:926917-926992:-1:exon
so has part: feature:926741-926805:-1:exon
so has part: feature:926568-926649:-1:exon
so has part: feature:926272-926372:-1:exon
so has part: feature:926058-926153:-1:exon
so has part: feature:925866-925976:-1:exon
so has part: feature:925648-925743:-1:exon

XP_040472535.1
type: Protein
SIO_000068: ncbiprotein

position:925648:-1
position: 925648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927954:-1
position: 927954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927922-927954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926917-926992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926741-926805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926568-926649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926272-926372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926058-926153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:925866-925976:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925648-925743:-1:exon

LOC121098525
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(929436..933487)
location: region:929436-933487:-1
so has part: feature:929436-933487:-1:exon
subclass of: SO_0000010

121098525
type: Gene
SIO_000068: ncbigene

position:929436:-1
position: 929436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933487:-1
position: 933487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929436-933487:-1:exon

LOC121098525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098525
product: glutathione S-transferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_040616600.1
SIO_010081: LOC121098525
subclass of: SO_0000673
so part of: LOC121098525
location: complement(join(929436..929971,931457..931567,931654..931749,931992..932092,932185..932266,932355..932419,933175..933250,933353..933487))
location: region:929436-933487:-1
so has part: feature:933353-933487:-1:exon
so has part: feature:933175-933250:-1:exon
so has part: feature:932355-932419:-1:exon
so has part: feature:932185-932266:-1:exon
so has part: feature:931992-932092:-1:exon
so has part: feature:931654-931749:-1:exon
so has part: feature:931457-931567:-1:exon
so has part: feature:929436-929971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933353-933487:-1:exon

position:933353:-1
position: 933353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933175-933250:-1:exon

position:933175:-1
position: 933175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933250:-1
position: 933250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932355-932419:-1:exon

position:932355:-1
position: 932355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932419:-1
position: 932419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:932185-932266:-1:exon

position:932185:-1
position: 932185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932266:-1
position: 932266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:931992-932092:-1:exon

position:931992:-1
position: 931992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932092:-1
position: 932092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:931654-931749:-1:exon

position:931654:-1
position: 931654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931749:-1
position: 931749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:931457-931567:-1:exon

position:931457:-1
position: 931457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931567:-1
position: 931567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:929436-929971:-1:exon

position:929971:-1
position: 929971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase 2
translation: MVVTLGYWDIRGLAHAIRLLLEYTETPYQERQYRPGPAPDFDPSDWTNEKEKLGLDFPNLPYLIDGPTKLTQSNAILRYIARKHKMCGETEEEMLRVDMLENQLMDLRMSFARLCYNPDFEKLKPAYLEQLPGKLRELSRFLGSRPWFAGQKLTFVDFLAYDVLDQHRMFVPECPELQGNLGQFLQRFEALEKISAYMRSGRFMKSPIFWRTAQWCNTKE
SIO_010081: LOC121098525
subclass of: SO_0000673
so part of: LOC121098525
location: complement(join(929876..929971,931457..931567,931654..931749,931992..932092,932185..932266,932355..932419,933175..933250,933353..933388))
location: region:929876-933388:-1
so has part: feature:933353-933388:-1:exon
so has part: feature:933175-933250:-1:exon
so has part: feature:932355-932419:-1:exon
so has part: feature:932185-932266:-1:exon
so has part: feature:931992-932092:-1:exon
so has part: feature:931654-931749:-1:exon
so has part: feature:931457-931567:-1:exon
so has part: feature:929876-929971:-1:exon

XP_040472534.1
type: Protein
SIO_000068: ncbiprotein

position:929876:-1
position: 929876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933388:-1
position: 933388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933353-933388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933175-933250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932355-932419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932185-932266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931992-932092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:931654-931749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:931457-931567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929876-929971:-1:exon

AMPD2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AMPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933776..942123)
location: region:933776-942123:-1
so has part: feature:933776-942123:-1:exon
subclass of: SO_0000010

121098527
type: Gene
SIO_000068: ncbigene

position:933776:-1
position: 933776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942123:-1
position: 942123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933776-942123:-1:exon

AMPD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AMPD2
product: adenosine monophosphate deaminase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616602.1
SIO_010081: AMPD2
subclass of: SO_0000673
so part of: AMPD2
location: complement(join(933776..934860,934975..935085,935318..935491,935574..935694,935778..935941,936065..936191,936335..936498,936617..936748,936948..937142,937235..937364,937613..937702,937840..937981,938068..938269,938375..938486,939117..939185,939519..939649,939882..940012,942002..942123))
location: region:933776-942123:-1
so has part: feature:942002-942123:-1:exon
so has part: feature:939882-940012:-1:exon
so has part: feature:939519-939649:-1:exon
so has part: feature:939117-939185:-1:exon
so has part: feature:938375-938486:-1:exon
so has part: feature:938068-938269:-1:exon
so has part: feature:937840-937981:-1:exon
so has part: feature:937613-937702:-1:exon
so has part: feature:937235-937364:-1:exon
so has part: feature:936948-937142:-1:exon
so has part: feature:936617-936748:-1:exon
so has part: feature:936335-936498:-1:exon
so has part: feature:936065-936191:-1:exon
so has part: feature:935778-935941:-1:exon
so has part: feature:935574-935694:-1:exon
so has part: feature:935318-935491:-1:exon
so has part: feature:934975-935085:-1:exon
so has part: feature:933776-934860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:942002-942123:-1:exon

position:942002:-1
position: 942002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939882-940012:-1:exon

position:939882:-1
position: 939882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940012:-1
position: 940012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939519-939649:-1:exon

position:939519:-1
position: 939519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939649:-1
position: 939649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939117-939185:-1:exon

position:939117:-1
position: 939117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939185:-1
position: 939185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:938375-938486:-1:exon

position:938375:-1
position: 938375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938486:-1
position: 938486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:938068-938269:-1:exon

position:938068:-1
position: 938068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938269:-1
position: 938269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:937840-937981:-1:exon

position:937840:-1
position: 937840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937981:-1
position: 937981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:937613-937702:-1:exon

position:937613:-1
position: 937613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937702:-1
position: 937702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:937235-937364:-1:exon

position:937235:-1
position: 937235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937364:-1
position: 937364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:936948-937142:-1:exon

position:936948:-1
position: 936948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937142:-1
position: 937142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:936617-936748:-1:exon

position:936617:-1
position: 936617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936748:-1
position: 936748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:936335-936498:-1:exon

position:936335:-1
position: 936335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936498:-1
position: 936498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:936065-936191:-1:exon

position:936065:-1
position: 936065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936191:-1
position: 936191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:935778-935941:-1:exon

position:935778:-1
position: 935778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935941:-1
position: 935941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:935574-935694:-1:exon

position:935574:-1
position: 935574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935694:-1
position: 935694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:935318-935491:-1:exon

position:935318:-1
position: 935318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935491:-1
position: 935491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:934975-935085:-1:exon

position:934975:-1
position: 934975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935085:-1
position: 935085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:933776-934860:-1:exon

position:934860:-1
position: 934860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMPD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AMPD2
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(938078..938080),aa:OTHER)
product: LOW QUALITY PROTEIN: AMP deaminase 2
translation: MSSAAPAKCPFKKRGSLQAPSPAELRAGPGSRPLQSARSLPGTPHCLKHFPVDLRTSMDGKYKEIAEELFCRSLAESEMRTAPYEFPEESPIEQLEERRQRLERQISQDVKLEPDILLRAKQDFLKIDSAADLQLFKEQSEDLVDHVPKEREALLEREFQRVTISGEEKCGVPFTDLLDAAKSVVKALFLREKYMGLSLQSFCKTTARYLQELSEKPLETRRYEEVPETPRGRRXARADAPVHPPFAEQHPYEMWDPQAMPADLGFGLKMVDGVVHVYTKQDLTDKSTELDLPYPDLQEFIADMNFLMALIINGPIKSFCYRRLQYLSSKFQMHVLLNEMKELAAQKKVPHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKKHLDEIVHVEKGKEQTLKEVFETMNLTAYDLSVDTLDVHADRNTFHRFDKFNAKYNPIGESILREIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAELRLSIYGRSRDEWDKLARWAVNHRVHSNNVRWLVQVPRLFDVYRTKKQLANFQEMLENIFLPLYEATVHPAQHPELHLFLEHVDGFDSVDDESKPEHHIFNLDSPLPGNWVEEDNPPYSYYLYYMYANMTVLNHLRRKRGFHTFVLRPHCGEAGPIHHLVSGFMVSENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSYWLGPHYLKEGPEGNDIRRTNVPDIRVSYRFETLCQELTLITQAVQTEELETIQEEDALTITSTLGTH
SIO_010081: AMPD2
subclass of: SO_0000673
so part of: AMPD2
location: complement(join(934645..934860,934975..935085,935318..935491,935574..935694,935778..935941,936065..936191,936335..936498,936617..936748,936948..937142,937235..937364,937613..937702,937840..937981,938068..938269,938375..938486,939117..939185,939519..939649,939882..940012,942002..942071))
location: region:934645-942071:-1
so has part: feature:942002-942071:-1:exon
so has part: feature:939882-940012:-1:exon
so has part: feature:939519-939649:-1:exon
so has part: feature:939117-939185:-1:exon
so has part: feature:938375-938486:-1:exon
so has part: feature:938068-938269:-1:exon
so has part: feature:937840-937981:-1:exon
so has part: feature:937613-937702:-1:exon
so has part: feature:937235-937364:-1:exon
so has part: feature:936948-937142:-1:exon
so has part: feature:936617-936748:-1:exon
so has part: feature:936335-936498:-1:exon
so has part: feature:936065-936191:-1:exon
so has part: feature:935778-935941:-1:exon
so has part: feature:935574-935694:-1:exon
so has part: feature:935318-935491:-1:exon
so has part: feature:934975-935085:-1:exon
so has part: feature:934645-934860:-1:exon

XP_040472536.1
type: Protein
SIO_000068: ncbiprotein

position:934645:-1
position: 934645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942071:-1
position: 942071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942002-942071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:939882-940012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939519-939649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939117-939185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:938375-938486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938068-938269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:937840-937981:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937613-937702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937235-937364:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936948-937142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:936617-936748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:936335-936498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:936065-936191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:935778-935941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:935574-935694:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:935318-935491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:934975-935085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:934645-934860:-1:exon

GNAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GNAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 945398..953936
location: region:945398-953936:1
so has part: feature:945398-953936:1:exon
subclass of: SO_0000010

121098475
type: Gene
SIO_000068: ncbigene

position:945398:1
position: 945398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953936:1
position: 953936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945398-953936:1:exon

GNAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GNAT2
product: G protein subunit alpha transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 107 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616471.1
SIO_010081: GNAT2
subclass of: SO_0000673
so part of: GNAT2
location: join(945398..945744,946639..946681,946921..947062,947248..947405,948516..948644,948859..948988,951215..951368,951764..951969,953095..953936)
location: region:945398-953936:1
so has part: feature:945398-945744:1:exon
so has part: feature:946639-946681:1:exon
so has part: feature:946921-947062:1:exon
so has part: feature:947248-947405:1:exon
so has part: feature:948516-948644:1:exon
so has part: feature:948859-948988:1:exon
so has part: feature:951215-951368:1:exon
so has part: feature:951764-951969:1:exon
so has part: feature:953095-953936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945398-945744:1:exon

position:945744:1
position: 945744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946639-946681:1:exon

position:946639:1
position: 946639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946681:1
position: 946681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946921-947062:1:exon

position:946921:1
position: 946921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947062:1
position: 947062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947248-947405:1:exon

position:947248:1
position: 947248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947405:1
position: 947405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948516-948644:1:exon

position:948516:1
position: 948516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948644:1
position: 948644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:948859-948988:1:exon

position:948859:1
position: 948859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948988:1
position: 948988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951215-951368:1:exon

position:951215:1
position: 951215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951368:1
position: 951368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951764-951969:1:exon

position:951764:1
position: 951764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951969:1
position: 951969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:953095-953936:1:exon

position:953095:1
position: 953095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GNAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(t) subunit alpha-2
translation: MGSGASAEDKEMAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYTAEECMEFKAVIYGNILQSILAIVRAMSTLGIDYAEASCADTGRQLFNLADSIEEGTMPPELVDCIKKLWKDGGVQACFERAAEYQLNDSAAYYLNQLDRITAPSYLPNEQDVLRSRVKTTGIIETKFSVKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCGALSAYDMVLVEDDEVNRMHESLHLFNSICNHKFFAATSIILFLNKKDLFEEKIKKVHLSICFPEYDGPNTFEDAGNYIKTQFLDLNMRKDVKEIYSHMTCATDTQNVKFVFDAVTDVIIKENLKDCGLF
SIO_010081: GNAT2
subclass of: SO_0000673
so part of: GNAT2
location: join(945627..945744,946639..946681,946921..947062,947248..947405,948516..948644,948859..948988,951215..951368,951764..951954)
location: region:945627-951954:1
so has part: feature:945627-945744:1:exon
so has part: feature:946639-946681:1:exon
so has part: feature:946921-947062:1:exon
so has part: feature:947248-947405:1:exon
so has part: feature:948516-948644:1:exon
so has part: feature:948859-948988:1:exon
so has part: feature:951215-951368:1:exon
so has part: feature:951764-951954:1:exon

XP_040472405.1
type: Protein
SIO_000068: ncbiprotein

position:945627:1
position: 945627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951954:1
position: 951954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945627-945744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946639-946681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946921-947062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947248-947405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948516-948644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948859-948988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951215-951368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951764-951954:1:exon

GNAI3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GNAI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(954824..987553)
location: region:954824-987553:-1
so has part: feature:954824-987553:-1:exon
subclass of: SO_0000010

121098474
type: Gene
SIO_000068: ncbigene

position:954824:-1
position: 954824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987553:-1
position: 987553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954824-987553:-1:exon

GNAI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GNAI3
product: G protein subunit alpha i3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 98 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616470.1
SIO_010081: GNAI3
subclass of: SO_0000673
so part of: GNAI3
location: complement(join(954824..955983,956109..956323,957174..957327,957819..957948,960481..960609,967508..967665,969566..969707,969821..969863,987314..987553))
location: region:954824-987553:-1
so has part: feature:987314-987553:-1:exon
so has part: feature:969821-969863:-1:exon
so has part: feature:969566-969707:-1:exon
so has part: feature:967508-967665:-1:exon
so has part: feature:960481-960609:-1:exon
so has part: feature:957819-957948:-1:exon
so has part: feature:957174-957327:-1:exon
so has part: feature:956109-956323:-1:exon
so has part: feature:954824-955983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987314-987553:-1:exon

position:987314:-1
position: 987314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969821-969863:-1:exon

position:969821:-1
position: 969821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969863:-1
position: 969863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969566-969707:-1:exon

position:969566:-1
position: 969566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969707:-1
position: 969707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967508-967665:-1:exon

position:967508:-1
position: 967508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967665:-1
position: 967665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:960481-960609:-1:exon

position:960481:-1
position: 960481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960609:-1
position: 960609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:957819-957948:-1:exon

position:957819:-1
position: 957819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957948:-1
position: 957948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:957174-957327:-1:exon

position:957174:-1
position: 957174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957327:-1
position: 957327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956109-956323:-1:exon

position:956109:-1
position: 956109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956323:-1
position: 956323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954824-955983:-1:exon

position:955983:-1
position: 955983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNAI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GNAI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(i) subunit alpha-3
translation: MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGEVARADDARQLFVLAGSAEEGVMTTELAGVIKRLWRDAGVQACFSRSREYQLNDSASYYLNDLDRISQPTYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKECGLY
SIO_010081: GNAI3
subclass of: SO_0000673
so part of: GNAI3
location: complement(join(956133..956323,957174..957327,957819..957948,960481..960609,967508..967665,969566..969707,969821..969863,987314..987431))
location: region:956133-987431:-1
so has part: feature:987314-987431:-1:exon
so has part: feature:969821-969863:-1:exon
so has part: feature:969566-969707:-1:exon
so has part: feature:967508-967665:-1:exon
so has part: feature:960481-960609:-1:exon
so has part: feature:957819-957948:-1:exon
so has part: feature:957174-957327:-1:exon
so has part: feature:956133-956323:-1:exon

XP_040472404.1
type: Protein
SIO_000068: ncbiprotein

position:956133:-1
position: 956133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987431:-1
position: 987431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987314-987431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:969821-969863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969566-969707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967508-967665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960481-960609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957819-957948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957174-957327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956133-956323:-1:exon

GPR61
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GPR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(988759..991234)
location: region:988759-991234:-1
so has part: feature:988759-991234:-1:exon
subclass of: SO_0000010

121098543
type: Gene
SIO_000068: ncbigene

position:988759:-1
position: 988759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991234:-1
position: 991234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988759-991234:-1:exon

GPR61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GPR61
product: G protein-coupled receptor 61
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616629.1
SIO_010081: GPR61
subclass of: SO_0000673
so part of: GPR61
location: complement(join(988759..990327,991043..991234))
location: region:988759-991234:-1
so has part: feature:991043-991234:-1:exon
so has part: feature:988759-990327:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991043-991234:-1:exon

position:991043:-1
position: 991043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:988759-990327:-1:exon

position:990327:-1
position: 990327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GPR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 61
translation: MEPSLPVPWGWNGSRGARVLQPSPGPMPPNGTADGKPKDVASKSVGLFFMLLIDLTAIVGNAAVMTVIVKTPALRKFVFVFHLCLVDFLAALTLMPLEMLSGSAVFDSPVFGEAMCRVYLFLSVCFISMCILSISTINVERYYYVVHPMRYEVRMTVGLVACVLVGVWLKAVATSLVPVLGWLSPDRPPVPAGRGCSLQWSRGPYCKFFVVFFAAFYFLLPLIIIVVVYCSMFKVARVAAMHHGPLPTWMETPRRRSESLSSRSTMVTTSGAPRTTPQRTFGGGKAAAILLAVGGQFLFCWLPYFSFHLYTALSAQPLVGPAAETVVTWLGYFCFTSNPFFYGCLNRQIRGELGRLLTCFFKQPPEEDLRLPSREGSIEENFLQFLQGTGCPAEPRPRTPSPKRDQAPVDFRIPGQIDEDAMEGTERRGGDGLFVPVVASPKLEL
SIO_010081: GPR61
subclass of: SO_0000673
so part of: GPR61
location: complement(988779..990116)
location: region:988779-990116:-1
so has part: feature:988779-990116:-1:exon

XP_040472563.1
type: Protein
SIO_000068: ncbiprotein

position:988779:-1
position: 988779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990116:-1
position: 990116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988779-990116:-1:exon

AMIGO1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AMIGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <998844..1001197
location: region:998844-1001197:1
so has part: feature:998844-1001197:1:exon
subclass of: SO_0000010

121098734
type: Gene
SIO_000068: ncbigene

position:998844:1
position: 998844
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1001197:1
position: 1001197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998844-1001197:1:exon

AMIGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AMIGO1
product: adhesion molecule with Ig like domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040617031.1
SIO_010081: AMIGO1
subclass of: SO_0000673
so part of: AMIGO1
location: <998844..1001197
location: region:998844-1001197:1
so has part: feature:998844-1001197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998844-1001197:1:exon

AMIGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AMIGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amphoterin-induced protein 1
translation: AAGPAHAVTPGDRSHPVQASPVCRCRVPCTRVTPRGRAWPWGPSGGPGAPLLLALALLAPWGSAGGSCPPRCICASNILSCSQAVLSAVPAPLPRFTAVLDLSHNNVSRLRADWAPGRLAHLHALLLSHNGLSFVSTEAFSHVPHLRHLDLSSNRLRALEENLFSDLAELEVLLLYNNEISAVDRTAFDNLGRLRKLYLGQNRIARFPLELLRDGSRLPQLALLDLSANRLRSVPVGELQALPAWLRDRLYLHGNPLACDCPLFQLVARGHRRRLSAVLDFQEELRCHLPSAPTPVGILALAGRQPLNCSEAREAVLEAHLGDTVTLSCDTRLRGVRSRHWVTPGGERVLEEGGNGSAALLANGSLQLRALRPEDAGTYACWVAGPLLNETLYVELLVHNFTLHGPHDTLNTAYTTLVGCILSVVLVLIYLYLTPCRCCCCRSTDKPPAPRDDSINSSVLSATPNHARVPGEPCRSRSASTASPGQNGRFKVGGTPQLPPRHGPKAQRKVSDPDSVSSVFSDTPIVV
SIO_010081: AMIGO1
subclass of: SO_0000673
so part of: AMIGO1
location: <998844..1000427
location: region:998844-1000427:1
so has part: feature:998844-1000427:1:exon

XP_040472965.1
type: Protein
SIO_000068: ncbiprotein

position:1000427:1
position: 1000427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998844-1000427:1:exon

ATXN7L2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ATXN7L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1002411..1010944)
location: region:1002411-1010944:-1
so has part: feature:1002411-1010944:-1:exon
subclass of: SO_0000010

121098752
type: Gene
SIO_000068: ncbigene

position:1002411:-1
position: 1002411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010944:-1
position: 1010944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002411-1010944:-1:exon

ATXN7L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ATXN7L2
product: ataxin 7 like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040617057.1
SIO_010081: ATXN7L2
subclass of: SO_0000673
so part of: ATXN7L2
location: complement(join(1002411..1002626,1003972..1004810,1005583..1005704,1005858..1006038,1006144..1006385,1006535..1006617,1007437..1007723,1007805..1008000,1008251..1008355,1008482..1008556,1010792..1010944))
location: region:1002411-1010944:-1
so has part: feature:1010792-1010944:-1:exon
so has part: feature:1008482-1008556:-1:exon
so has part: feature:1008251-1008355:-1:exon
so has part: feature:1007805-1008000:-1:exon
so has part: feature:1007437-1007723:-1:exon
so has part: feature:1006535-1006617:-1:exon
so has part: feature:1006144-1006385:-1:exon
so has part: feature:1005858-1006038:-1:exon
so has part: feature:1005583-1005704:-1:exon
so has part: feature:1003972-1004810:-1:exon
so has part: feature:1002411-1002626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010792-1010944:-1:exon

position:1010792:-1
position: 1010792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008482-1008556:-1:exon

position:1008482:-1
position: 1008482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008556:-1
position: 1008556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008251-1008355:-1:exon

position:1008251:-1
position: 1008251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008355:-1
position: 1008355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007805-1008000:-1:exon

position:1007805:-1
position: 1007805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008000:-1
position: 1008000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1007437-1007723:-1:exon

position:1007437:-1
position: 1007437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007723:-1
position: 1007723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006535-1006617:-1:exon

position:1006535:-1
position: 1006535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006617:-1
position: 1006617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006144-1006385:-1:exon

position:1006144:-1
position: 1006144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006385:-1
position: 1006385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1005858-1006038:-1:exon

position:1005858:-1
position: 1005858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006038:-1
position: 1006038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1005583-1005704:-1:exon

position:1005583:-1
position: 1005583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005704:-1
position: 1005704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1003972-1004810:-1:exon

position:1003972:-1
position: 1003972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004810:-1
position: 1004810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1002411-1002626:-1:exon

position:1002626:-1
position: 1002626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATXN7L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ATXN7L2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ataxin-7-like protein 2
translation: MAAERRLPSLDEFAGQSWSAWVERAGPPAEPGSGLELEESGKNGGKKLDAMTLIKEDMNIFGHCPAHDEFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYTRAAAAKCHVAVNGQAGGTPGGTPGGAKALREKHPGARGRVQPLPERPDKDNNLCLFVPVVNLEKIPSIPKPDGHGIKVPPKAMPTNSKEPLGKPATAAVPKEPPVSAAVGGDSAMPADGPGCKPESTPAPGEKDAGASKPPPRSHKKLARKECDLNRQCGVLNPDTKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKASSRKGEAPKERSPPGKDPLPPPPQDPSSLPQLPTGPPSTPPCRAKLPHSHCLLPRARLSSDSDSEDAPAASREGGTGVFPFPLPKGGSRVSSEESEEEGGEEPPRPPTRPPRPQAFCTFGSRLVSPGCYVFNRRLDRFCSALGSMLERHLSSHMWRKIPPAAEPPLHTPPAAPSPAAPPCGPAAPXLPPPPPRTLGAAAAPPGTREGRVPASLNYTVGSPHAAAACSQPECGGGGSQSITSPLPANIPSPSFSKLPSTKASKSSRAREVAGGMDPDTRKWKPPLTAGGPPYKRPCSGDGVKNKTPSCQVSPLPGKTKPPPPGCPAASSTAVLNGATRVKRLPPPECRGPPAAAADPRGSPLHGPGGPLPPRCISEDEVKKRKNAATYCRPVKPKPAPPLPAPPPPPSPAPPDSGGSVRRKKPGTPLGFEEKRSALKSKAH
SIO_010081: ATXN7L2
subclass of: SO_0000673
so part of: ATXN7L2
location: complement(join(1002612..1002626,1003972..1004810,1005583..1005704,1005858..1006038,1006144..1006385,1006535..1006617,1007437..1007723,1007805..1008000,1008251..1008355,1008482..1008556,1010792..1010885))
location: region:1002612-1010885:-1
so has part: feature:1010792-1010885:-1:exon
so has part: feature:1008482-1008556:-1:exon
so has part: feature:1008251-1008355:-1:exon
so has part: feature:1007805-1008000:-1:exon
so has part: feature:1007437-1007723:-1:exon
so has part: feature:1006535-1006617:-1:exon
so has part: feature:1006144-1006385:-1:exon
so has part: feature:1005858-1006038:-1:exon
so has part: feature:1005583-1005704:-1:exon
so has part: feature:1003972-1004810:-1:exon
so has part: feature:1002612-1002626:-1:exon

XP_040472991.1
type: Protein
SIO_000068: ncbiprotein

position:1002612:-1
position: 1002612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010885:-1
position: 1010885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010792-1010885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008482-1008556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1008251-1008355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007805-1008000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007437-1007723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006535-1006617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006144-1006385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005858-1006038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005583-1005704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003972-1004810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002612-1002626:-1:exon

SYPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SYPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1012630..1019192)
location: region:1012630-1019192:-1
so has part: feature:1012630-1019192:-1:exon
subclass of: SO_0000010

121098518
type: Gene
SIO_000068: ncbigene

position:1012630:-1
position: 1012630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019192:-1
position: 1019192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012630-1019192:-1:exon

SYPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SYPL2
product: synaptophysin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616574.1
SIO_010081: SYPL2
subclass of: SO_0000673
so part of: SYPL2
location: complement(join(1012630..1013457,1014850..1015041,1015142..1015343,1016346..1016470,1018536..1018607,1019053..1019192))
location: region:1012630-1019192:-1
so has part: feature:1019053-1019192:-1:exon
so has part: feature:1018536-1018607:-1:exon
so has part: feature:1016346-1016470:-1:exon
so has part: feature:1015142-1015343:-1:exon
so has part: feature:1014850-1015041:-1:exon
so has part: feature:1012630-1013457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019053-1019192:-1:exon

position:1019053:-1
position: 1019053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018536-1018607:-1:exon

position:1018536:-1
position: 1018536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018607:-1
position: 1018607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016346-1016470:-1:exon

position:1016346:-1
position: 1016346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016470:-1
position: 1016470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015142-1015343:-1:exon

position:1015142:-1
position: 1015142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015343:-1
position: 1015343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014850-1015041:-1:exon

position:1014850:-1
position: 1014850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015041:-1
position: 1015041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1012630-1013457:-1:exon

position:1013457:-1
position: 1013457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SYPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 2
translation: MSEPGAPAAGDKAPRLQDRVLAGVRWGRLQEPLGFIKVLEWLFAIFAFGACGSFSGETGVTVRCSSETKEISAIFVQFGYPFRLYQIPFEMPDCEEESETRTLHLIGDFSAPAEFFVTLGVFCFLYAMAALVLYLRFHSLYSENKKLPFADFCVTVCFAFFWLVAAAAWGKGLTDVKAATRPASLIAAMGVCQGQEVVCNAGATPAMGLANISVLFGFINFLLWAGNCWFVLKETSWHAPVAPRDSAAEQGAIDKQ
SIO_010081: SYPL2
subclass of: SO_0000673
so part of: SYPL2
location: complement(join(1013329..1013457,1014850..1015041,1015142..1015343,1016346..1016470,1018536..1018607,1019053..1019103))
location: region:1013329-1019103:-1
so has part: feature:1019053-1019103:-1:exon
so has part: feature:1018536-1018607:-1:exon
so has part: feature:1016346-1016470:-1:exon
so has part: feature:1015142-1015343:-1:exon
so has part: feature:1014850-1015041:-1:exon
so has part: feature:1013329-1013457:-1:exon

XP_040472508.1
type: Protein
SIO_000068: ncbiprotein

position:1013329:-1
position: 1013329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019103:-1
position: 1019103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019053-1019103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018536-1018607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016346-1016470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015142-1015343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014850-1015041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013329-1013457:-1:exon

PSMA5
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PSMA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1019827..1031206
location: region:1019827-1031206:1
so has part: feature:1019827-1031206:1:exon
subclass of: SO_0000010

121098559
type: Gene
SIO_000068: ncbigene

position:1019827:1
position: 1019827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031206:1
position: 1031206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019827-1031206:1:exon

PSMA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PSMA5
product: proteasome 20S subunit alpha 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040616684.1
SIO_010081: PSMA5
subclass of: SO_0000673
so part of: PSMA5
location: join(1019827..1019974,1021012..1021078,1023340..1023466,1024492..1024559,1025362..1025469,1025564..1025622,1026544..1026646,1027828..1027914,1030924..1031206)
location: region:1019827-1031206:1
so has part: feature:1019827-1019974:1:exon
so has part: feature:1021012-1021078:1:exon
so has part: feature:1023340-1023466:1:exon
so has part: feature:1024492-1024559:1:exon
so has part: feature:1025362-1025469:1:exon
so has part: feature:1025564-1025622:1:exon
so has part: feature:1026544-1026646:1:exon
so has part: feature:1027828-1027914:1:exon
so has part: feature:1030924-1031206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019827-1019974:1:exon

position:1019974:1
position: 1019974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1021012-1021078:1:exon

position:1021012:1
position: 1021012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021078:1
position: 1021078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023340-1023466:1:exon

position:1023340:1
position: 1023340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023466:1
position: 1023466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024492-1024559:1:exon

position:1024492:1
position: 1024492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024559:1
position: 1024559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1025362-1025469:1:exon

position:1025362:1
position: 1025362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025469:1
position: 1025469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025564-1025622:1:exon

position:1025564:1
position: 1025564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025622:1
position: 1025622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1026544-1026646:1:exon

position:1026544:1
position: 1026544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026646:1
position: 1026646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1027828-1027914:1:exon

position:1027828:1
position: 1027828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027914:1
position: 1027914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030924-1031206:1:exon

position:1030924:1
position: 1030924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PSMA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-5
translation: MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLVILKQVMEEKLNATNIELATVEPGMKFHMYTKEELEEVIKDI
SIO_010081: PSMA5
subclass of: SO_0000673
so part of: PSMA5
location: join(1019946..1019974,1021012..1021078,1023340..1023466,1024492..1024559,1025362..1025469,1025564..1025622,1026544..1026646,1027828..1027914,1030924..1031001)
location: region:1019946-1031001:1
so has part: feature:1019946-1019974:1:exon
so has part: feature:1021012-1021078:1:exon
so has part: feature:1023340-1023466:1:exon
so has part: feature:1024492-1024559:1:exon
so has part: feature:1025362-1025469:1:exon
so has part: feature:1025564-1025622:1:exon
so has part: feature:1026544-1026646:1:exon
so has part: feature:1027828-1027914:1:exon
so has part: feature:1030924-1031001:1:exon

XP_040472618.1
type: Protein
SIO_000068: ncbiprotein

position:1019946:1
position: 1019946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031001:1
position: 1031001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019946-1019974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1021012-1021078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023340-1023466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024492-1024559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025362-1025469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025564-1025622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026544-1026646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027828-1027914:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030924-1031001:1:exon

SORT1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SORT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1034419..1044499
location: region:1034419-1044499:1
so has part: feature:1034419-1044499:1:exon
subclass of: SO_0000010

121098603
type: Gene
SIO_000068: ncbigene

position:1034419:1
position: 1034419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044499:1
position: 1044499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034419-1044499:1:exon

SORT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SORT1
product: sortilin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_040616807.1
SIO_010081: SORT1
subclass of: SO_0000673
so part of: SORT1
location: join(1034419..1034549,1036711..1036770,1037034..1037107,1037233..1037335,1037491..1037655,1037899..1037972,1038160..1038209,1038417..1038547,1038659..1038803,1039162..1039317,1039485..1039591,1039904..1040006,1040095..1040263,1040399..1040589,1041562..1041751,1041866..1041982,1042153..1042261,1042490..1042596,1042822..1042945,1043068..1044499)
location: region:1034419-1044499:1
so has part: feature:1034419-1034549:1:exon
so has part: feature:1036711-1036770:1:exon
so has part: feature:1037034-1037107:1:exon
so has part: feature:1037233-1037335:1:exon
so has part: feature:1037491-1037655:1:exon
so has part: feature:1037899-1037972:1:exon
so has part: feature:1038160-1038209:1:exon
so has part: feature:1038417-1038547:1:exon
so has part: feature:1038659-1038803:1:exon
so has part: feature:1039162-1039317:1:exon
so has part: feature:1039485-1039591:1:exon
so has part: feature:1039904-1040006:1:exon
so has part: feature:1040095-1040263:1:exon
so has part: feature:1040399-1040589:1:exon
so has part: feature:1041562-1041751:1:exon
so has part: feature:1041866-1041982:1:exon
so has part: feature:1042153-1042261:1:exon
so has part: feature:1042490-1042596:1:exon
so has part: feature:1042822-1042945:1:exon
so has part: feature:1043068-1044499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034419-1034549:1:exon

position:1034549:1
position: 1034549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036711-1036770:1:exon

position:1036711:1
position: 1036711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036770:1
position: 1036770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037034-1037107:1:exon

position:1037034:1
position: 1037034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037107:1
position: 1037107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037233-1037335:1:exon

position:1037233:1
position: 1037233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037335:1
position: 1037335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037491-1037655:1:exon

position:1037491:1
position: 1037491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037655:1
position: 1037655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1037899-1037972:1:exon

position:1037899:1
position: 1037899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037972:1
position: 1037972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1038160-1038209:1:exon

position:1038160:1
position: 1038160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038209:1
position: 1038209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1038417-1038547:1:exon

position:1038417:1
position: 1038417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038547:1
position: 1038547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1038659-1038803:1:exon

position:1038659:1
position: 1038659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038803:1
position: 1038803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1039162-1039317:1:exon

position:1039162:1
position: 1039162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039317:1
position: 1039317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1039485-1039591:1:exon

position:1039485:1
position: 1039485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039591:1
position: 1039591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1039904-1040006:1:exon

position:1039904:1
position: 1039904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040006:1
position: 1040006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1040095-1040263:1:exon

position:1040095:1
position: 1040095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040263:1
position: 1040263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1040399-1040589:1:exon

position:1040399:1
position: 1040399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040589:1
position: 1040589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1041562-1041751:1:exon

position:1041562:1
position: 1041562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041751:1
position: 1041751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1041866-1041982:1:exon

position:1041866:1
position: 1041866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041982:1
position: 1041982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1042153-1042261:1:exon

position:1042153:1
position: 1042153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042261:1
position: 1042261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1042490-1042596:1:exon

position:1042490:1
position: 1042490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042596:1
position: 1042596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1042822-1042945:1:exon

position:1042822:1
position: 1042822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042945:1
position: 1042945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1043068-1044499:1:exon

position:1043068:1
position: 1043068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SORT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SORT1
product: sortilin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_040616809.1
SIO_010081: SORT1
subclass of: SO_0000673
so part of: SORT1
location: join(1034478..1034549,1036711..1036770,1037034..1037107,1037233..1037335,1037491..1037655,1037899..1037972,1038160..1038209,1038420..1038547,1038659..1038803,1039162..1039317,1039485..1039591,1039904..1040006,1040095..1040263,1040399..1040589,1041562..1041751,1041866..1041982,1042153..1042261,1042490..1042596,1042822..1042945,1043068..1044499)
location: region:1034478-1044499:1
so has part: feature:1034478-1034549:1:exon
so has part: feature:1036711-1036770:1:exon
so has part: feature:1037034-1037107:1:exon
so has part: feature:1037233-1037335:1:exon
so has part: feature:1037491-1037655:1:exon
so has part: feature:1037899-1037972:1:exon
so has part: feature:1038160-1038209:1:exon
so has part: feature:1038420-1038547:1:exon
so has part: feature:1038659-1038803:1:exon
so has part: feature:1039162-1039317:1:exon
so has part: feature:1039485-1039591:1:exon
so has part: feature:1039904-1040006:1:exon
so has part: feature:1040095-1040263:1:exon
so has part: feature:1040399-1040589:1:exon
so has part: feature:1041562-1041751:1:exon
so has part: feature:1041866-1041982:1:exon
so has part: feature:1042153-1042261:1:exon
so has part: feature:1042490-1042596:1:exon
so has part: feature:1042822-1042945:1:exon
so has part: feature:1043068-1044499:1:exon

position:1034478:1
position: 1034478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034478-1034549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036711-1036770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037034-1037107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037233-1037335:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037491-1037655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037899-1037972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038160-1038209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038420-1038547:1:exon

position:1038420:1
position: 1038420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1038659-1038803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039162-1039317:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1039485-1039591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1039904-1040006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1040095-1040263:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040399-1040589:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1041562-1041751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1041866-1041982:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1042153-1042261:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1042490-1042596:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1042822-1042945:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1043068-1044499:1:exon

SORT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SORT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sortilin isoform X1
translation: MSFGQSKLYRSEDYGKTFKDITGLINNTFIRTEFGMAIGPENSGKVILTGDVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLVQITYHPQNSDCLLALSTENGLWVSKDFGEKWEEIHKAVCLAKWGANDTIFFTTYLNNSCKADLGLLELKKTSDFGKTFKVIGTKIYSFGLGGRFLFASVMTEKGTTRRIHVSLDQGETWNMAQLPSVGHEQFYSILAANDDLVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERHLYTTTGGETDFTNVTSLRGIYITSVLSEDNSIQSVITFDRGGEWVPLRKPKNTTCDSTARSKEECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGGAISVMSPDVYISDDGGYTWARMLEGPHHYAILDSGGLIVAIEHTSQPVNVIEFSTDEGQCWYQYAFSKEPIFFTGLASEPGARSMNVSIWGFRGSFLSRKWVSYTIDFSELLSRTCEDKDYTIWLAHSSDPSDPSDGCILGYKEQYRRLRKSSVCQNGRDYVVTKQPSVCPCTLEDFLCDFGYYRPENQSVCVEQPELKGHDLEFCLYGRRELLKTSGYRKIPGDKCSGGESPSREETDMKKKCTSNFLNPSQLAASTSSTPIILAVVAVLLVTAVAGVLLVKKYVCGGRFLVHRYSVLRQHAEANGVEGIDTLDPGTLASKSGYHDDSDEDLLE
SIO_010081: SORT1
subclass of: SO_0000673
so part of: SORT1
location: join(1037076..1037107,1037233..1037335,1037491..1037655,1037899..1037972,1038160..1038209,1038417..1038547,1038659..1038803,1039162..1039317,1039485..1039591,1039904..1040006,1040095..1040263,1040399..1040589,1041562..1041751,1041866..1041982,1042153..1042261,1042490..1042596,1042822..1042945,1043068..1043082)
location: region:1037076-1043082:1
so has part: feature:1037076-1037107:1:exon
so has part: feature:1037233-1037335:1:exon
so has part: feature:1037491-1037655:1:exon
so has part: feature:1037899-1037972:1:exon
so has part: feature:1038160-1038209:1:exon
so has part: feature:1038417-1038547:1:exon
so has part: feature:1038659-1038803:1:exon
so has part: feature:1039162-1039317:1:exon
so has part: feature:1039485-1039591:1:exon
so has part: feature:1039904-1040006:1:exon
so has part: feature:1040095-1040263:1:exon
so has part: feature:1040399-1040589:1:exon
so has part: feature:1041562-1041751:1:exon
so has part: feature:1041866-1041982:1:exon
so has part: feature:1042153-1042261:1:exon
so has part: feature:1042490-1042596:1:exon
so has part: feature:1042822-1042945:1:exon
so has part: feature:1043068-1043082:1:exon

XP_040472741.1
type: Protein
SIO_000068: ncbiprotein

position:1037076:1
position: 1037076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043082:1
position: 1043082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037076-1037107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1037233-1037335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037491-1037655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037899-1037972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038160-1038209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038417-1038547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038659-1038803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039162-1039317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039485-1039591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039904-1040006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040095-1040263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040399-1040589:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041562-1041751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041866-1041982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1042153-1042261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1042490-1042596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1042822-1042945:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1043068-1043082:1:exon

SORT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SORT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sortilin isoform X2
translation: MSFGQSKLYRSEDYGKTFKDITGLINNTFIRTEFGMAIGPENSGKVILTGDVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLVQITYHPQNSDCLLALSTENGLWVSKDFGEKWEEIHKAVCLAKWGANDTIFFTTYLNNSCTDLGLLELKKTSDFGKTFKVIGTKIYSFGLGGRFLFASVMTEKGTTRRIHVSLDQGETWNMAQLPSVGHEQFYSILAANDDLVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERHLYTTTGGETDFTNVTSLRGIYITSVLSEDNSIQSVITFDRGGEWVPLRKPKNTTCDSTARSKEECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGGAISVMSPDVYISDDGGYTWARMLEGPHHYAILDSGGLIVAIEHTSQPVNVIEFSTDEGQCWYQYAFSKEPIFFTGLASEPGARSMNVSIWGFRGSFLSRKWVSYTIDFSELLSRTCEDKDYTIWLAHSSDPSDPSDGCILGYKEQYRRLRKSSVCQNGRDYVVTKQPSVCPCTLEDFLCDFGYYRPENQSVCVEQPELKGHDLEFCLYGRRELLKTSGYRKIPGDKCSGGESPSREETDMKKKCTSNFLNPSQLAASTSSTPIILAVVAVLLVTAVAGVLLVKKYVCGGRFLVHRYSVLRQHAEANGVEGIDTLDPGTLASKSGYHDDSDEDLLE
SIO_010081: SORT1
subclass of: SO_0000673
so part of: SORT1
location: join(1037076..1037107,1037233..1037335,1037491..1037655,1037899..1037972,1038160..1038209,1038420..1038547,1038659..1038803,1039162..1039317,1039485..1039591,1039904..1040006,1040095..1040263,1040399..1040589,1041562..1041751,1041866..1041982,1042153..1042261,1042490..1042596,1042822..1042945,1043068..1043082)
location: region:1037076-1043082:1
so has part: feature:1037076-1037107:1:exon
so has part: feature:1037233-1037335:1:exon
so has part: feature:1037491-1037655:1:exon
so has part: feature:1037899-1037972:1:exon
so has part: feature:1038160-1038209:1:exon
so has part: feature:1038420-1038547:1:exon
so has part: feature:1038659-1038803:1:exon
so has part: feature:1039162-1039317:1:exon
so has part: feature:1039485-1039591:1:exon
so has part: feature:1039904-1040006:1:exon
so has part: feature:1040095-1040263:1:exon
so has part: feature:1040399-1040589:1:exon
so has part: feature:1041562-1041751:1:exon
so has part: feature:1041866-1041982:1:exon
so has part: feature:1042153-1042261:1:exon
so has part: feature:1042490-1042596:1:exon
so has part: feature:1042822-1042945:1:exon
so has part: feature:1043068-1043082:1:exon

XP_040472743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1037076-1037107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1037233-1037335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037491-1037655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037899-1037972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038160-1038209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038420-1038547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038659-1038803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039162-1039317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039485-1039591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039904-1040006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040095-1040263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1040399-1040589:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041562-1041751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041866-1041982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1042153-1042261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1042490-1042596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1042822-1042945:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1043068-1043082:1:exon

LOC121098500
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1045282..1058431)
location: region:1045282-1058431:-1
so has part: feature:1045282-1058431:-1:exon
subclass of: SO_0000010

121098500
type: Gene
SIO_000068: ncbigene

position:1045282:-1
position: 1045282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058431:-1
position: 1058431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045282-1058431:-1:exon

LOC121098500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098500
product: copine-5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616528.1
SIO_010081: LOC121098500
subclass of: SO_0000673
so part of: LOC121098500
location: complement(join(1045282..1045492,1046048..1046121,1046549..1046606,1048494..1048596,1048677..1048804,1048879..1049060,1049170..1049216,1049514..1049575,1049660..1049713,1050770..1050845,1050930..1050971,1051463..1051567,1051808..1051911,1052164..1052227,1052329..1052388,1052673..1052749,1052857..1052896,1053403..1053506,1055425..1055471,1055536..1055576,1058318..1058431))
location: region:1045282-1058431:-1
so has part: feature:1058318-1058431:-1:exon
so has part: feature:1055536-1055576:-1:exon
so has part: feature:1055425-1055471:-1:exon
so has part: feature:1053403-1053506:-1:exon
so has part: feature:1052857-1052896:-1:exon
so has part: feature:1052673-1052749:-1:exon
so has part: feature:1052329-1052388:-1:exon
so has part: feature:1052164-1052227:-1:exon
so has part: feature:1051808-1051911:-1:exon
so has part: feature:1051463-1051567:-1:exon
so has part: feature:1050930-1050971:-1:exon
so has part: feature:1050770-1050845:-1:exon
so has part: feature:1049660-1049713:-1:exon
so has part: feature:1049514-1049575:-1:exon
so has part: feature:1049170-1049216:-1:exon
so has part: feature:1048879-1049060:-1:exon
so has part: feature:1048677-1048804:-1:exon
so has part: feature:1048494-1048596:-1:exon
so has part: feature:1046549-1046606:-1:exon
so has part: feature:1046048-1046121:-1:exon
so has part: feature:1045282-1045492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058318-1058431:-1:exon

position:1058318:-1
position: 1058318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1055536-1055576:-1:exon

position:1055536:-1
position: 1055536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055576:-1
position: 1055576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055425-1055471:-1:exon

position:1055425:-1
position: 1055425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055471:-1
position: 1055471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053403-1053506:-1:exon

position:1053403:-1
position: 1053403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053506:-1
position: 1053506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1052857-1052896:-1:exon

position:1052857:-1
position: 1052857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052896:-1
position: 1052896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1052673-1052749:-1:exon

position:1052673:-1
position: 1052673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052749:-1
position: 1052749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1052329-1052388:-1:exon

position:1052329:-1
position: 1052329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052388:-1
position: 1052388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1052164-1052227:-1:exon

position:1052164:-1
position: 1052164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052227:-1
position: 1052227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1051808-1051911:-1:exon

position:1051808:-1
position: 1051808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051911:-1
position: 1051911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1051463-1051567:-1:exon

position:1051463:-1
position: 1051463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051567:-1
position: 1051567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1050930-1050971:-1:exon

position:1050930:-1
position: 1050930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050971:-1
position: 1050971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1050770-1050845:-1:exon

position:1050770:-1
position: 1050770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050845:-1
position: 1050845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1049660-1049713:-1:exon

position:1049660:-1
position: 1049660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049713:-1
position: 1049713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1049514-1049575:-1:exon

position:1049514:-1
position: 1049514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049575:-1
position: 1049575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1049170-1049216:-1:exon

position:1049170:-1
position: 1049170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049216:-1
position: 1049216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1048879-1049060:-1:exon

position:1048879:-1
position: 1048879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049060:-1
position: 1049060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1048677-1048804:-1:exon

position:1048677:-1
position: 1048677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048804:-1
position: 1048804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1048494-1048596:-1:exon

position:1048494:-1
position: 1048494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048596:-1
position: 1048596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1046549-1046606:-1:exon

position:1046549:-1
position: 1046549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046606:-1
position: 1046606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1046048-1046121:-1:exon

position:1046048:-1
position: 1046048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046121:-1
position: 1046121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1045282-1045492:-1:exon

position:1045492:-1
position: 1045492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098500
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: copine-5-like
translation: MAGLGAPEPGSGAGPVPATRVELTVSCRQLLDKDTFSKSDPLCVLYTQRPGSRQWREFGRTEVIDNSLNPDFLRKFVLDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSAGSRLEKPLTMGTVTTHGRGRRPAPAVSNGGIPGKKCGTIILLAEELGNCRDVATLQFCANKLDKKDFFGKSDPFMVFYRSNEDGTFTICHKTEVVRNTLNPVWQAFTIPVRALCNGDYDRAIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNVYEVVNPRKKMKKKKYLNSGTVTLLSFAVESDHTFLDYIRGGTQINFTVAIDFTASNGNPSQSTSLHYLSPYQLNAYTMALKAVGEIIQDYDSDKMFPALGFGAKIPPDGRVSHEFPLNGDVANPACSGIEGVLEAYHRSLRSVQLYGPTNFAPVVNHVARSAAAVLDGSQYFVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDIRISSRGKVAERDIVQFVPFRDYLDGGGSPVLSMARLAKDVLAEIPDQFISYMKARGIKPQPAPPSPDPPGPPVPPQP
SIO_010081: LOC121098500
subclass of: SO_0000673
so part of: LOC121098500
location: complement(join(1045303..1045492,1046048..1046121,1046549..1046606,1048494..1048596,1048677..1048804,1048879..1049060,1049170..1049216,1049514..1049575,1049660..1049713,1050770..1050845,1050930..1050971,1051463..1051567,1051808..1051911,1052164..1052227,1052329..1052388,1052673..1052749,1052857..1052896,1053403..1053506,1055425..1055471,1055536..1055576,1058318..1058400))
location: region:1045303-1058400:-1
so has part: feature:1058318-1058400:-1:exon
so has part: feature:1055536-1055576:-1:exon
so has part: feature:1055425-1055471:-1:exon
so has part: feature:1053403-1053506:-1:exon
so has part: feature:1052857-1052896:-1:exon
so has part: feature:1052673-1052749:-1:exon
so has part: feature:1052329-1052388:-1:exon
so has part: feature:1052164-1052227:-1:exon
so has part: feature:1051808-1051911:-1:exon
so has part: feature:1051463-1051567:-1:exon
so has part: feature:1050930-1050971:-1:exon
so has part: feature:1050770-1050845:-1:exon
so has part: feature:1049660-1049713:-1:exon
so has part: feature:1049514-1049575:-1:exon
so has part: feature:1049170-1049216:-1:exon
so has part: feature:1048879-1049060:-1:exon
so has part: feature:1048677-1048804:-1:exon
so has part: feature:1048494-1048596:-1:exon
so has part: feature:1046549-1046606:-1:exon
so has part: feature:1046048-1046121:-1:exon
so has part: feature:1045303-1045492:-1:exon

XP_040472462.1
type: Protein
SIO_000068: ncbiprotein

position:1045303:-1
position: 1045303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058400:-1
position: 1058400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058318-1058400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055536-1055576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055425-1055471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053403-1053506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052857-1052896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052673-1052749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052329-1052388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1052164-1052227:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1051808-1051911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1051463-1051567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1050930-1050971:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1050770-1050845:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1049660-1049713:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1049514-1049575:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1049170-1049216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1048879-1049060:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048677-1048804:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1048494-1048596:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046549-1046606:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046048-1046121:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045303-1045492:-1:exon

PPIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PPIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1060059..1062741)
location: region:1060059-1062741:-1
so has part: feature:1060059-1062741:-1:exon
subclass of: SO_0000010

121098743
type: Gene
SIO_000068: ncbigene

position:1060059:-1
position: 1060059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062741:-1
position: 1062741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060059-1062741:-1:exon

PPIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PPIL1
product: peptidylprolyl isomerase like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040617038.1
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(1060059..1060372,1061571..1061639,1061715..1061869,1062581..1062741))
location: region:1060059-1062741:-1
so has part: feature:1062581-1062741:-1:exon
so has part: feature:1061715-1061869:-1:exon
so has part: feature:1061571-1061639:-1:exon
so has part: feature:1060059-1060372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062581-1062741:-1:exon

position:1062581:-1
position: 1062581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061715-1061869:-1:exon

position:1061715:-1
position: 1061715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061869:-1
position: 1061869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1061571-1061639:-1:exon

position:1061571:-1
position: 1061571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061639:-1
position: 1061639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060059-1060372:-1:exon

position:1060372:-1
position: 1060372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PPIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 1
translation: MAAVPPDSWQPPTVSMETTMGPLVLELYWKHAPRTCKNFAELCRRGYYNGTKFHRVIKDFMVQGGDPTGTGRGGASIYGKQFEDELHPELKFTGAGILAMANAGPDTNGSQFFLTLGPAQWLDGKHSIFGRVCQGMGVLGRLAMVETNAQDRPLDDVKVIKAFPSG
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(1060152..1060372,1061571..1061639,1061715..1061869,1062581..1062636))
location: region:1060152-1062636:-1
so has part: feature:1062581-1062636:-1:exon
so has part: feature:1061715-1061869:-1:exon
so has part: feature:1061571-1061639:-1:exon
so has part: feature:1060152-1060372:-1:exon

XP_040472972.1
type: Protein
SIO_000068: ncbiprotein

position:1060152:-1
position: 1060152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062636:-1
position: 1062636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062581-1062636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061715-1061869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061571-1061639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060152-1060372:-1:exon

PSRC1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063024..1066399
location: region:1063024-1066399:1
so has part: feature:1063024-1066399:1:exon
subclass of: SO_0000010

121098557
type: Gene
SIO_000068: ncbigene

position:1063024:1
position: 1063024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066399:1
position: 1066399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063024-1066399:1:exon

PSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PSRC1
product: proline and serine rich coiled-coil 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616681.1
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(1063024..1063109,1063846..1063900,1063979..1064036,1065001..1065325,1065532..1066065,1066168..1066399)
location: region:1063024-1066399:1
so has part: feature:1063024-1063109:1:exon
so has part: feature:1063846-1063900:1:exon
so has part: feature:1063979-1064036:1:exon
so has part: feature:1065001-1065325:1:exon
so has part: feature:1065532-1066065:1:exon
so has part: feature:1066168-1066399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063024-1063109:1:exon

position:1063109:1
position: 1063109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1063846-1063900:1:exon

position:1063846:1
position: 1063846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063900:1
position: 1063900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1063979-1064036:1:exon

position:1063979:1
position: 1063979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064036:1
position: 1064036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065001-1065325:1:exon

position:1065001:1
position: 1065001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065325:1
position: 1065325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1065532-1066065:1:exon

position:1065532:1
position: 1065532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066065:1
position: 1066065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1066168-1066399:1:exon

position:1066168:1
position: 1066168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PSRC1
product: proline and serine rich coiled-coil 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040616682.1
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(1063024..1063109,1063846..1063900,1063979..1064036,1065001..1065325,1065532..1065688,1065881..1066065,1066168..1066399)
location: region:1063024-1066399:1
so has part: feature:1063024-1063109:1:exon
so has part: feature:1063846-1063900:1:exon
so has part: feature:1063979-1064036:1:exon
so has part: feature:1065001-1065325:1:exon
so has part: feature:1065532-1065688:1:exon
so has part: feature:1065881-1066065:1:exon
so has part: feature:1066168-1066399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063024-1063109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063846-1063900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063979-1064036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065001-1065325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065532-1065688:1:exon

position:1065688:1
position: 1065688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1066065:1:exon

position:1065881:1
position: 1065881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1066168-1066399:1:exon

PSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline/serine-rich coiled-coil protein 1 isoform X1
translation: MAEEGAETLRWGLGSPPEAAPALAPWAEAEAMAEERDVRFVTEESFDFGLLSPSDSQEEEEDEGEAGARAGGGSGRWSPLHGARLEEMVREATRLAAQLEQCHLSPSARHGPRSPRRETFVVKDSPVRALLPTVEPRGPPPATTRPPAKPRGAPTATTIPSTRKVSPSCHPTAVSKGPPGARVPPPNRQGPPRPCPAQGQGAAARGKSEPLQVGTAGTGSVRGWGQHGHPRRGAPAPWGPAPHQGPSTLGQVGAKATPKPHRGVGVWVPPPCPPRALLSPGQPKVRGGAAPCPPATRQPRTRATTVPVPSSRPPRPQRHPQGTWTDPGGGGLHRVGGHPRPEVWGRHGQPPRPPARGANPDLPPAASAPPRKTAMSSTPR
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(1063056..1063109,1063846..1063900,1063979..1064036,1065001..1065325,1065532..1066065,1066168..1066284)
location: region:1063056-1066284:1
so has part: feature:1063056-1063109:1:exon
so has part: feature:1063846-1063900:1:exon
so has part: feature:1063979-1064036:1:exon
so has part: feature:1065001-1065325:1:exon
so has part: feature:1065532-1066065:1:exon
so has part: feature:1066168-1066284:1:exon

XP_040472615.1
type: Protein
SIO_000068: ncbiprotein

position:1063056:1
position: 1063056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066284:1
position: 1066284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063056-1063109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063846-1063900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063979-1064036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065001-1065325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065532-1066065:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1066168-1066284:1:exon

PSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline/serine-rich coiled-coil protein 1 isoform X2
translation: MAEEGAETLRWGLGSPPEAAPALAPWAEAEAMAEERDVRFVTEESFDFGLLSPSDSQEEEEDEGEAGARAGGGSGRWSPLHGARLEEMVREATRLAAQLEQCHLSPSARHGPRSPRRETFVVKDSPVRALLPTVEPRGPPPATTRPPAKPRGAPTATTIPSTRKVSPSCHPTAVSKGPPGARVPPPNRQGPPRPCPAQGQGAAARGKSEPLQVGTAGQPKVRGGAAPCPPATRQPRTRATTVPVPSSRPPRPQRHPQGTWTDPGGGGLHRVGGHPRPEVWGRHGQPPRPPARGANPDLPPAASAPPRKTAMSSTPR
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(1063056..1063109,1063846..1063900,1063979..1064036,1065001..1065325,1065532..1065688,1065881..1066065,1066168..1066284)
location: region:1063056-1066284:1
so has part: feature:1063056-1063109:1:exon
so has part: feature:1063846-1063900:1:exon
so has part: feature:1063979-1064036:1:exon
so has part: feature:1065001-1065325:1:exon
so has part: feature:1065532-1065688:1:exon
so has part: feature:1065881-1066065:1:exon
so has part: feature:1066168-1066284:1:exon

XP_040472616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1063056-1063109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063846-1063900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063979-1064036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065001-1065325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065532-1065688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1066065:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1066168-1066284:1:exon

CELSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: CELSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1066500..1101137)
location: region:1066500-1101137:-1
so has part: feature:1066500-1101137:-1:exon
subclass of: SO_0000010

121098558
type: Gene
SIO_000068: ncbigene

position:1066500:-1
position: 1066500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101137:-1
position: 1101137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066500-1101137:-1:exon

CELSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CELSR2
product: cadherin EGF LAG seven-pass G-type receptor 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040616683.1
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(1066500..1067311,1068353..1068590,1068726..1068932,1069127..1069276,1069385..1069473,1071109..1071239,1071326..1071448,1072105..1072231,1072736..1072812,1072889..1073001,1074055..1074229,1074836..1075036,1075510..1075636,1076470..1076637,1077092..1077344,1077853..1077996,1078458..1078641,1080508..1080717,1080793..1080887,1082090..1082191,1082677..1082857,1082956..1083076,1083886..1084027,1084495..1084669,1085442..1085555,1085728..1085914,1086852..1087018,1087097..1087222,1087806..1087969,1090183..1090340,1090594..1090682,1091715..1091830,1092507..1092729,1094743..1095387,1097588..1101137))
location: region:1066500-1101137:-1
so has part: feature:1097588-1101137:-1:exon
so has part: feature:1094743-1095387:-1:exon
so has part: feature:1092507-1092729:-1:exon
so has part: feature:1091715-1091830:-1:exon
so has part: feature:1090594-1090682:-1:exon
so has part: feature:1090183-1090340:-1:exon
so has part: feature:1087806-1087969:-1:exon
so has part: feature:1087097-1087222:-1:exon
so has part: feature:1086852-1087018:-1:exon
so has part: feature:1085728-1085914:-1:exon
so has part: feature:1085442-1085555:-1:exon
so has part: feature:1084495-1084669:-1:exon
so has part: feature:1083886-1084027:-1:exon
so has part: feature:1082956-1083076:-1:exon
so has part: feature:1082677-1082857:-1:exon
so has part: feature:1082090-1082191:-1:exon
so has part: feature:1080793-1080887:-1:exon
so has part: feature:1080508-1080717:-1:exon
so has part: feature:1078458-1078641:-1:exon
so has part: feature:1077853-1077996:-1:exon
so has part: feature:1077092-1077344:-1:exon
so has part: feature:1076470-1076637:-1:exon
so has part: feature:1075510-1075636:-1:exon
so has part: feature:1074836-1075036:-1:exon
so has part: feature:1074055-1074229:-1:exon
so has part: feature:1072889-1073001:-1:exon
so has part: feature:1072736-1072812:-1:exon
so has part: feature:1072105-1072231:-1:exon
so has part: feature:1071326-1071448:-1:exon
so has part: feature:1071109-1071239:-1:exon
so has part: feature:1069385-1069473:-1:exon
so has part: feature:1069127-1069276:-1:exon
so has part: feature:1068726-1068932:-1:exon
so has part: feature:1068353-1068590:-1:exon
so has part: feature:1066500-1067311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097588-1101137:-1:exon

position:1097588:-1
position: 1097588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094743-1095387:-1:exon

position:1094743:-1
position: 1094743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095387:-1
position: 1095387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092507-1092729:-1:exon

position:1092507:-1
position: 1092507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092729:-1
position: 1092729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1091715-1091830:-1:exon

position:1091715:-1
position: 1091715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091830:-1
position: 1091830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090594-1090682:-1:exon

position:1090594:-1
position: 1090594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090682:-1
position: 1090682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1090183-1090340:-1:exon

position:1090183:-1
position: 1090183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090340:-1
position: 1090340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1087806-1087969:-1:exon

position:1087806:-1
position: 1087806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087969:-1
position: 1087969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1087097-1087222:-1:exon

position:1087097:-1
position: 1087097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087222:-1
position: 1087222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1086852-1087018:-1:exon

position:1086852:-1
position: 1086852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087018:-1
position: 1087018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1085728-1085914:-1:exon

position:1085728:-1
position: 1085728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085914:-1
position: 1085914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1085442-1085555:-1:exon

position:1085442:-1
position: 1085442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085555:-1
position: 1085555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1084495-1084669:-1:exon

position:1084495:-1
position: 1084495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084669:-1
position: 1084669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1083886-1084027:-1:exon

position:1083886:-1
position: 1083886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084027:-1
position: 1084027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1082956-1083076:-1:exon

position:1082956:-1
position: 1082956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083076:-1
position: 1083076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1082677-1082857:-1:exon

position:1082677:-1
position: 1082677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082857:-1
position: 1082857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1082090-1082191:-1:exon

position:1082090:-1
position: 1082090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082191:-1
position: 1082191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1080793-1080887:-1:exon

position:1080793:-1
position: 1080793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080887:-1
position: 1080887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1080508-1080717:-1:exon

position:1080508:-1
position: 1080508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080717:-1
position: 1080717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1078458-1078641:-1:exon

position:1078458:-1
position: 1078458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078641:-1
position: 1078641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1077853-1077996:-1:exon

position:1077853:-1
position: 1077853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077996:-1
position: 1077996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1077092-1077344:-1:exon

position:1077092:-1
position: 1077092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077344:-1
position: 1077344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1076470-1076637:-1:exon

position:1076470:-1
position: 1076470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076637:-1
position: 1076637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1075510-1075636:-1:exon

position:1075510:-1
position: 1075510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075636:-1
position: 1075636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1074836-1075036:-1:exon

position:1074836:-1
position: 1074836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075036:-1
position: 1075036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1074055-1074229:-1:exon

position:1074055:-1
position: 1074055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074229:-1
position: 1074229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1072889-1073001:-1:exon

position:1072889:-1
position: 1072889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073001:-1
position: 1073001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1072736-1072812:-1:exon

position:1072736:-1
position: 1072736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072812:-1
position: 1072812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1072105-1072231:-1:exon

position:1072105:-1
position: 1072105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072231:-1
position: 1072231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1071326-1071448:-1:exon

position:1071326:-1
position: 1071326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071448:-1
position: 1071448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1071109-1071239:-1:exon

position:1071109:-1
position: 1071109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071239:-1
position: 1071239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1069385-1069473:-1:exon

position:1069385:-1
position: 1069385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069473:-1
position: 1069473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1069127-1069276:-1:exon

position:1069127:-1
position: 1069127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069276:-1
position: 1069276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1068726-1068932:-1:exon

position:1068726:-1
position: 1068726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068932:-1
position: 1068932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1068353-1068590:-1:exon

position:1068353:-1
position: 1068353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068590:-1
position: 1068590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1066500-1067311:-1:exon

position:1067311:-1
position: 1067311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CELSR2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 2
translation: MGAPPARGAALLLLLLPLLLLLLLPLPAPGQPRRPPPGPATGTGTGTCPPGALLRRLQPRGGTGDSGSSGGTGDSGGAGPAPSTGASSGTGDSGGGGPSPAAGGCGGGASSRDGGGGTGSPGDTGGGGSPGGAQGHGGTGGTGDSGGTGSTRVPVDTRSSGDVGRAGDTGGTDTPMDTASTGDVMSSGDAGHAGDTGGTQVSTAARDPGRTGDARKVPSDTSSTGGTTGTGDIGAHPTTGATGSHVTHSRSRRRRSPNTAPQFQPSSYQASVGENRPAGTPVTRVTAVDPDEGDAGQLRYTMAALFDSRSDALFAMDPITGAVTTATPLDRESKSTHVFRVTAVDHGTPRRSAMATLTVTVSDANDHDPAFEQAEYRESVRENLEVGYEVLTVRATDGDAGPNANVLYRLLNAGGANEVFEIDSRSGVIRTRGPVDRETVEAFELLVEATDQGQDPGPRSATATVRITVEDDNDNAPQFSEKRYVAQVPEDVAPNSAVLRVTATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGALDVVSPLDYEVSKEFTLRIRAQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVGYSVIHVQAIDADSGDNSRLVYTLLETGSGFPFAINNSTGWIVVASELDREAVDFYSFGVEAQDQGNPPMASSASVSVTILDVNDNSPEFTQREYGARLNEDAAVGTSVLTVSAVDRDANSVITYQISSGNTRNRFSITSQSGGGLISLALPLDYKLERQYLLTIAASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPVGTTVVVISATDEDTGENARITYLMEDSIPQFRIAAETGAVTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRDSYQGSVYEDVPAFTSVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYSLRAFAVDKGVPAKRTPVEIQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYESKAEYVMVVQATSAPLVSRATVHVRLRDANDNSPQLKNFEILFNNYITNRSGSFPGGVIGRIPAHDPDVSDSLTYAFEQGNELNLVLLDPHSGDLRLSPALDNNRPLEAVMRVSVSDGVHSATAQCTLRVTVITDEMLSNSITLRLADMSQERFLSPLLSRFLEGVAAVLATPRHRVVLFNIQTDTDVGTARILNVSLSVLLPAAGHGTRFFSSEELQERLYLNRSLLAAISAQRVLPFDDNICLREPCENYMRCVSVLQFDSSAPFLASDTILFRPIHPVTGLRCRCPPGFTGDYCETEIDLCYSSPCGSNGRCRSREGGYTCECHEDFTGERCELSARGGRCTPGVCRNGGTCLNLLVGGFRCQCPPGHYEKPFCTMSTRSFPPRSFLTFRGLRQRFHFTLALTFATKERDGLLLYNGRFNEKHDFVALEIVGEQVQLTFSAGETTTTVSPFVPGGVSDGQWHRVQLHYYNKPVLGRSGLPQGPSEQKVAVVTVDDCDTGMALRFGPILGNYSCAAQGTQSGSKKSLDLTGPLLLGGVPTLPESFPIRSRQFVGCMRHLHIDQRPIDLAAFIANNGTLPGCPAKKTLCDASTCHNGGTCVHEWDSFSCRCPLGFGGKTCQEEMASPQRFLGSSRMSWSGLALPVTVPWHLALMFRTRHPRGLLLRASAGPRATLTLQLSEGQAEAGVWQGGSRLAWLRLPHAKVNDGDWHHLQLELRGAPGRPPPATLLLLALDYGRHQAVADVAGELQGLRLRTLSVGGLAGDGGTVEQGFRGCLQGVRVGETAASAVALSVAQAARVNVEGGCALPDPCDSGPCPPHSYCSDDWDSFSCRCHPGYFGDSCVSACALNPCQSPATCARKPGSAHGYTCECPQGHFGPYCEHKEAQPCPRGWWGHPTCGPCSCDVTKGFDPDCNKTTGECRCKNHYRPAGS…
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(1067284..1067311,1068353..1068590,1068726..1068932,1069127..1069276,1069385..1069473,1071109..1071239,1071326..1071448,1072105..1072231,1072736..1072812,1072889..1073001,1074055..1074229,1074836..1075036,1075510..1075636,1076470..1076637,1077092..1077344,1077853..1077996,1078458..1078641,1080508..1080717,1080793..1080887,1082090..1082191,1082677..1082857,1082956..1083076,1083886..1084027,1084495..1084669,1085442..1085555,1085728..1085914,1086852..1087018,1087097..1087222,1087806..1087969,1090183..1090340,1090594..1090682,1091715..1091830,1092507..1092729,1094743..1095387,1097588..1101137))
location: region:1067284-1101137:-1
so has part: feature:1097588-1101137:-1:exon
so has part: feature:1094743-1095387:-1:exon
so has part: feature:1092507-1092729:-1:exon
so has part: feature:1091715-1091830:-1:exon
so has part: feature:1090594-1090682:-1:exon
so has part: feature:1090183-1090340:-1:exon
so has part: feature:1087806-1087969:-1:exon
so has part: feature:1087097-1087222:-1:exon
so has part: feature:1086852-1087018:-1:exon
so has part: feature:1085728-1085914:-1:exon
so has part: feature:1085442-1085555:-1:exon
so has part: feature:1084495-1084669:-1:exon
so has part: feature:1083886-1084027:-1:exon
so has part: feature:1082956-1083076:-1:exon
so has part: feature:1082677-1082857:-1:exon
so has part: feature:1082090-1082191:-1:exon
so has part: feature:1080793-1080887:-1:exon
so has part: feature:1080508-1080717:-1:exon
so has part: feature:1078458-1078641:-1:exon
so has part: feature:1077853-1077996:-1:exon
so has part: feature:1077092-1077344:-1:exon
so has part: feature:1076470-1076637:-1:exon
so has part: feature:1075510-1075636:-1:exon
so has part: feature:1074836-1075036:-1:exon
so has part: feature:1074055-1074229:-1:exon
so has part: feature:1072889-1073001:-1:exon
so has part: feature:1072736-1072812:-1:exon
so has part: feature:1072105-1072231:-1:exon
so has part: feature:1071326-1071448:-1:exon
so has part: feature:1071109-1071239:-1:exon
so has part: feature:1069385-1069473:-1:exon
so has part: feature:1069127-1069276:-1:exon
so has part: feature:1068726-1068932:-1:exon
so has part: feature:1068353-1068590:-1:exon
so has part: feature:1067284-1067311:-1:exon

XP_040472617.1
type: Protein
SIO_000068: ncbiprotein

position:1067284:-1
position: 1067284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097588-1101137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094743-1095387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092507-1092729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1091715-1091830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090594-1090682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090183-1090340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087806-1087969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087097-1087222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1086852-1087018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1085728-1085914:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085442-1085555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1084495-1084669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1083886-1084027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1082956-1083076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1082677-1082857:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1082090-1082191:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1080793-1080887:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1080508-1080717:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1078458-1078641:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1077853-1077996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1077092-1077344:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1076470-1076637:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1075510-1075636:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1074836-1075036:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1074055-1074229:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1072889-1073001:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1072736-1072812:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1072105-1072231:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1071326-1071448:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1071109-1071239:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1069385-1069473:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1069127-1069276:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1068726-1068932:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1068353-1068590:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1067284-1067311:-1:exon

SARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1102327..1109067)
location: region:1102327-1109067:-1
so has part: feature:1102327-1109067:-1:exon
subclass of: SO_0000010

121098556
type: Gene
SIO_000068: ncbigene

position:1102327:-1
position: 1102327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109067:-1
position: 1109067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102327-1109067:-1:exon

SARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SARS1
product: seryl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_040616679.1
SIO_010081: SARS1
subclass of: SO_0000673
so part of: SARS1
location: complement(join(1102327..1102781,1102909..1103038,1103145..1103302,1103874..1104003,1104090..1104311,1104799..1104954,1105308..1105451,1105934..1106092,1106741..1106821,1106994..1107064,1108871..1109067))
location: region:1102327-1109067:-1
so has part: feature:1108871-1109067:-1:exon
so has part: feature:1106994-1107064:-1:exon
so has part: feature:1106741-1106821:-1:exon
so has part: feature:1105934-1106092:-1:exon
so has part: feature:1105308-1105451:-1:exon
so has part: feature:1104799-1104954:-1:exon
so has part: feature:1104090-1104311:-1:exon
so has part: feature:1103874-1104003:-1:exon
so has part: feature:1103145-1103302:-1:exon
so has part: feature:1102909-1103038:-1:exon
so has part: feature:1102327-1102781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1108871-1109067:-1:exon

position:1108871:-1
position: 1108871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106994-1107064:-1:exon

position:1106994:-1
position: 1106994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107064:-1
position: 1107064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1106741-1106821:-1:exon

position:1106741:-1
position: 1106741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106821:-1
position: 1106821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105934-1106092:-1:exon

position:1105934:-1
position: 1105934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106092:-1
position: 1106092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105308-1105451:-1:exon

position:1105308:-1
position: 1105308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105451:-1
position: 1105451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1104799-1104954:-1:exon

position:1104799:-1
position: 1104799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104954:-1
position: 1104954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1104090-1104311:-1:exon

position:1104090:-1
position: 1104090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104311:-1
position: 1104311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1103874-1104003:-1:exon

position:1103874:-1
position: 1103874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104003:-1
position: 1104003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1103145-1103302:-1:exon

position:1103145:-1
position: 1103145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103302:-1
position: 1103302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1102909-1103038:-1:exon

position:1102909:-1
position: 1102909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103038:-1
position: 1103038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1102327-1102781:-1:exon

position:1102781:-1
position: 1102781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition