Falco naumanni isolate bFalNau1 chromosome 15, bFalNau1.pat, whole genome shotgun sequence.
type: Entry
definition: Falco naumanni isolate bFalNau1 chromosome 15, bFalNau1.pat, whole genome shotgun sequence.
sequence version: NC_054068.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_054068.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA719130
dblink: SAMN16870685
keyword: WGS
keyword: RefSeq
source: Falco naumanni (lesser kestrel)
organism: Falco naumanni
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030159.1.\nAssembly name: bFalNau1.pat\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGFVS000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; pbgcpp\n v. 1.9.0; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-14; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bFalNau1.pat\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 104.34x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Falco naumanni Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23244174
topology: linear
so has quality: SO_0000987
location: 1..23244174
location: region:1-23244174:1
RO_0002162: 148594

NC_054068
type: RefSeq
SIO_000068: refseq

PRJNA719130
type: BioProject
SIO_000068: bioproject

SAMN16870685
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23244174:1
position: 23244174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23244174:1:source
so part of: sequence
organism: Falco naumanni
mol type: genomic DNA
isolate: bFalNau1
specimen voucher: P51P2 - H187058 (nest 2016-P51)
chromosome: 15
sex: female
tissue type: blood
dev stage: juvenile
country: Italy: Matera
lat lon: 40.67 N 16.60 E
collection date: 2016-06-25
collected by: Diego Rubolini

148594
type: Taxonomy
SIO_000068: taxonomy

LOC121098166
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098166
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2301..2385)
location: region:2301-2385:-1
so has part: feature:2301-2385:-1:exon
subclass of: SO_0000578

121098166
type: Gene
SIO_000068: ncbigene

position:2301:-1
position: 2301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385:-1
position: 2385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301-2385:-1:exon

LOC121098166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: snoRNA
gene: LOC121098166
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005831193.1
SIO_010081: LOC121098166
subclass of: SO_0000673
so part of: LOC121098166
location: complement(2301..2385)
location: region:2301-2385:-1
so has part: feature:2301-2385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2301-2385:-1:exon

LOC121097794
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38762..43654)
location: region:38762-43654:-1
so has part: feature:38762-43654:-1:exon
subclass of: SO_0000010

121097794
type: Gene
SIO_000068: ncbigene

position:38762:-1
position: 38762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43654:-1
position: 43654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38762-43654:-1:exon

LOC121097794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097794
product: T-cell activation Rho GTPase-activating protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_040615104.1
SIO_010081: LOC121097794
subclass of: SO_0000673
so part of: LOC121097794
location: complement(join(38762..38791,39453..39648,39857..39966,40051..40212,40438..40497,41430..41483,41588..41672,42593..42712,43566..43654))
location: region:38762-43654:-1
so has part: feature:43566-43654:-1:exon
so has part: feature:42593-42712:-1:exon
so has part: feature:41588-41672:-1:exon
so has part: feature:41430-41483:-1:exon
so has part: feature:40438-40497:-1:exon
so has part: feature:40051-40212:-1:exon
so has part: feature:39857-39966:-1:exon
so has part: feature:39453-39648:-1:exon
so has part: feature:38762-38791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43566-43654:-1:exon

position:43566:-1
position: 43566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42593-42712:-1:exon

position:42593:-1
position: 42593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42712:-1
position: 42712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41588-41672:-1:exon

position:41588:-1
position: 41588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41672:-1
position: 41672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41430-41483:-1:exon

position:41430:-1
position: 41430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41483:-1
position: 41483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40438-40497:-1:exon

position:40438:-1
position: 40438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40497:-1
position: 40497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40051-40212:-1:exon

position:40051:-1
position: 40051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40212:-1
position: 40212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39857-39966:-1:exon

position:39857:-1
position: 39857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39966:-1
position: 39966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39453-39648:-1:exon

position:39453:-1
position: 39453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39648:-1
position: 39648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38762-38791:-1:exon

position:38791:-1
position: 38791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121097794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell activation Rho GTPase-activating protein-like
translation: MVMAYPTDSPLAVSATGWVKVMANRAGAPGEALSDAEPVLSADVRLTRGRKRSERRLLLLHEELVVAKLRTPERRKGARVTHLTSIKLLQKELSRRHAWRTVRARSLERLMEAQAEFGQPLAALCGEDNTLPRPIQELLAVLHQEGPMTEGIFRRAAGGTELRQLREALDRGTEVDVGSQPALLLAVILKEFLRSIPTKLLLIDLYEDWMAAMERASKQAKVEELKAVADKLPAANLLLLKRLMALLQHIGHNAATSRMSCSNLAICVGPNLLSPPNEDLLPLQAMLAVTEKKMRLLEQKL
SIO_010081: LOC121097794
subclass of: SO_0000673
so part of: LOC121097794
location: complement(join(38762..38791,39453..39648,39857..39966,40051..40212,40438..40497,41430..41483,41588..41672,42593..42712,43566..43654))
location: region:38762-43654:-1
so has part: feature:43566-43654:-1:exon
so has part: feature:42593-42712:-1:exon
so has part: feature:41588-41672:-1:exon
so has part: feature:41430-41483:-1:exon
so has part: feature:40438-40497:-1:exon
so has part: feature:40051-40212:-1:exon
so has part: feature:39857-39966:-1:exon
so has part: feature:39453-39648:-1:exon
so has part: feature:38762-38791:-1:exon

XP_040471038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43566-43654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42593-42712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41588-41672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41430-41483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40438-40497:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40051-40212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39857-39966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39453-39648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38762-38791:-1:exon

LOC121097805
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80986..95125)
location: region:80986-95125:-1
so has part: feature:80986-95125:-1:exon
subclass of: SO_0000010

121097805
type: Gene
SIO_000068: ncbigene

position:80986:-1
position: 80986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95125:-1
position: 95125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80986-95125:-1:exon

LOC121097805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097805
product: carbohydrate sulfotransferase 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040615126.1
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(80986..82511,95033..95125))
location: region:80986-95125:-1
so has part: feature:95033-95125:-1:exon
so has part: feature:80986-82511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95033-95125:-1:exon

position:95033:-1
position: 95033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80986-82511:-1:exon

position:82511:-1
position: 82511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121097805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097805
product: carbohydrate sulfotransferase 5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_040615128.1
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(80986..82511,92288..94364))
location: region:80986-94364:-1
so has part: feature:92288-94364:-1:exon
so has part: feature:80986-82511:-1:exon

position:94364:-1
position: 94364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92288-94364:-1:exon

position:92288:-1
position: 92288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80986-82511:-1:exon

LOC121097805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097805
product: carbohydrate sulfotransferase 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040615127.1
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(80986..82511,92214..94364))
location: region:80986-94364:-1
so has part: feature:92214-94364:-1:exon
so has part: feature:80986-82511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92214-94364:-1:exon

position:92214:-1
position: 92214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80986-82511:-1:exon

LOC121097805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097805
product: carbohydrate sulfotransferase 5-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040615129.1
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(80986..82511,91817..91975))
location: region:80986-91975:-1
so has part: feature:91817-91975:-1:exon
so has part: feature:80986-82511:-1:exon

position:91975:-1
position: 91975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91817-91975:-1:exon

position:91817:-1
position: 91817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80986-82511:-1:exon

LOC121097805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097805
product: carbohydrate sulfotransferase 5-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040615131.1
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(80986..82511,91055..91358,91817..91975))
location: region:80986-91975:-1
so has part: feature:91817-91975:-1:exon
so has part: feature:91055-91358:-1:exon
so has part: feature:80986-82511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91817-91975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91055-91358:-1:exon

position:91055:-1
position: 91055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91358:-1
position: 91358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80986-82511:-1:exon

LOC121097805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X1
translation: MRTFCCYCFSLVRMARIRIPSTVVILLVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSEVACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPNFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPMLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(join(81302..82511,95033..95043))
location: region:81302-95043:-1
so has part: feature:95033-95043:-1:exon
so has part: feature:81302-82511:-1:exon

XP_040471060.1
type: Protein
SIO_000068: ncbiprotein

position:81302:-1
position: 81302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95043:-1
position: 95043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95033-95043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81302-82511:-1:exon

LOC121097805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTVVILLVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSEVACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPNFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPMLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(81302..82483)
location: region:81302-82483:-1
so has part: feature:81302-82483:-1:exon

XP_040471061.1
type: Protein
SIO_000068: ncbiprotein

position:82483:-1
position: 82483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81302-82483:-1:exon

LOC121097805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTVVILLVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSEVACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPNFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPMLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(81302..82483)
location: region:81302-82483:-1
so has part: feature:81302-82483:-1:exon

XP_040471062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81302-82483:-1:exon

LOC121097805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTVVILLVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSEVACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPNFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPMLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(81302..82483)
location: region:81302-82483:-1
so has part: feature:81302-82483:-1:exon

XP_040471063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81302-82483:-1:exon

LOC121097805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like isoform X2
translation: MARIRIPSTVVILLVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSEVACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPNFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPMLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC121097805
subclass of: SO_0000673
so part of: LOC121097805
location: complement(81302..82483)
location: region:81302-82483:-1
so has part: feature:81302-82483:-1:exon

XP_040471065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81302-82483:-1:exon

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(94727..100265)
location: region:94727-100265:-1
so has part: feature:94727-100265:-1:exon
subclass of: SO_0000010

121097804
type: Gene
SIO_000068: ncbigene

position:94727:-1
position: 94727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100265:-1
position: 100265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94727-100265:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMEM231
product: transmembrane protein 231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040615124.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(94727..95317,96198..96303,96437..96518,96800..96943,99407..99576,99653..100265))
location: region:94727-100265:-1
so has part: feature:99653-100265:-1:exon
so has part: feature:99407-99576:-1:exon
so has part: feature:96800-96943:-1:exon
so has part: feature:96437-96518:-1:exon
so has part: feature:96198-96303:-1:exon
so has part: feature:94727-95317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99653-100265:-1:exon

position:99653:-1
position: 99653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99407-99576:-1:exon

position:99407:-1
position: 99407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99576:-1
position: 99576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96800-96943:-1:exon

position:96800:-1
position: 96800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96943:-1
position: 96943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96437-96518:-1:exon

position:96437:-1
position: 96437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96518:-1
position: 96518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96198-96303:-1:exon

position:96198:-1
position: 96198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96303:-1
position: 96303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94727-95317:-1:exon

position:95317:-1
position: 95317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMEM231
product: transmembrane protein 231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_040615123.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(94727..95317,96198..96303,96437..96518,96800..96943,98321..98449,99407..99576,99653..100265))
location: region:94727-100265:-1
so has part: feature:99653-100265:-1:exon
so has part: feature:99407-99576:-1:exon
so has part: feature:98321-98449:-1:exon
so has part: feature:96800-96943:-1:exon
so has part: feature:96437-96518:-1:exon
so has part: feature:96198-96303:-1:exon
so has part: feature:94727-95317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99653-100265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99407-99576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98321-98449:-1:exon

position:98321:-1
position: 98321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98449:-1
position: 98449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96800-96943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96437-96518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96198-96303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94727-95317:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MVRAGGERGQRRRGPCAGGRGLLPGGRACRCHGPCHNNNSRGSAGGISGSLFPSNPEGAASGRGSRGGAAAAGGRAGSSLAGAGLRAGLSRGARGCALGSAAAARGPVSLPWPFPGASRLTAAVGPGRQPCPLIGWRARSAVTRGQTRRPVRLAGSAMAGVELFSHPTLHTRYRAGLCSAAALALLLITVLTYVPPLLVAYRSHGLWLKHSAYLEQPTVRFRYEMLVVATLGLGPGSFLAWSTFPAFNRLQEDRLRVPLLARMSTFVMQSMAFLQFFSPVPGSQLCMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLTNIVAAYWDRNVTTVFSDPNPVWVAGRAADTPFIINATIHYPVEMILYQPGFWEVIKFAWIQYVSILLIFLWLFGRIKMFVFQNQVLTTTPISPVLPVSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(95128..95317,96198..96303,96437..96518,96800..96943,99407..99576,99653..100265))
location: region:95128-100265:-1
so has part: feature:99653-100265:-1:exon
so has part: feature:99407-99576:-1:exon
so has part: feature:96800-96943:-1:exon
so has part: feature:96437-96518:-1:exon
so has part: feature:96198-96303:-1:exon
so has part: feature:95128-95317:-1:exon

XP_040471058.1
type: Protein
SIO_000068: ncbiprotein

position:95128:-1
position: 95128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99653-100265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99407-99576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96800-96943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96437-96518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96198-96303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95128-95317:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X1
translation: MVRAGGERGQRRRGPCAGGRGLLPGGRACRCHGPCHNNNSRGSAGGISGSLFPSNPEGAASGRGSRGGAAAAGGRAGSSLAGAGLRAGLSRGARGCALGSAAAARGPVSLPWPFPGASRLTAAVGPGRQPCPLIGWRARSAVTRGQTRRPVRLAGSAMAGVELFSHPTLHTRYRAGLCSAAALALLLITVLTYVPPLLVAYRSHGLWLKHSAYLEQPTVRFRYEMLVVATLGLGPGSFLAWSTFPAFNRLQEDRLRVPLLATREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILLFSYQLYRMSTFVMQSMAFLQFFSPVPGSQLCMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLTNIVAAYWDRNVTTVFSDPNPVWVAGRAADTPFIINATIHYPVEMILYQPGFWEVIKFAWIQYVSILLIFLWLFGRIKMFVFQNQVLTTTPISPVLPVSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(95128..95317,96198..96303,96437..96518,96800..96943,98321..98449,99407..99576,99653..100265))
location: region:95128-100265:-1
so has part: feature:99653-100265:-1:exon
so has part: feature:99407-99576:-1:exon
so has part: feature:98321-98449:-1:exon
so has part: feature:96800-96943:-1:exon
so has part: feature:96437-96518:-1:exon
so has part: feature:96198-96303:-1:exon
so has part: feature:95128-95317:-1:exon

XP_040471057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99653-100265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99407-99576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98321-98449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96800-96943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96437-96518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96198-96303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95128-95317:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100186..108326
location: region:100186-108326:1
so has part: feature:100186-108326:1:exon
subclass of: SO_0000010

121097808
type: Gene
SIO_000068: ncbigene

position:100186:1
position: 100186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108326:1
position: 108326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100186-108326:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 50 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615134.1
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(100186..100297,100583..100638,105583..105755,107752..108326)
location: region:100186-108326:1
so has part: feature:100186-100297:1:exon
so has part: feature:100583-100638:1:exon
so has part: feature:105583-105755:1:exon
so has part: feature:107752-108326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100186-100297:1:exon

position:100297:1
position: 100297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100583-100638:1:exon

position:100583:1
position: 100583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100638:1
position: 100638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105583-105755:1:exon

position:105583:1
position: 105583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105755:1
position: 105755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107752-108326:1:exon

position:107752:1
position: 107752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(100264..100297,100583..100638,105583..105755,107752..107842)
location: region:100264-107842:1
so has part: feature:100264-100297:1:exon
so has part: feature:100583-100638:1:exon
so has part: feature:105583-105755:1:exon
so has part: feature:107752-107842:1:exon

XP_040471068.1
type: Protein
SIO_000068: ncbiprotein

position:100264:1
position: 100264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107842:1
position: 107842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100264-100297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100583-100638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105583-105755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107752-107842:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106222..137460)
location: region:106222-137460:-1
so has part: feature:106222-137460:-1:exon
subclass of: SO_0000010

121097803
type: Gene
SIO_000068: ncbigene

position:106222:-1
position: 106222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137460:-1
position: 137460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106222-137460:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005831091.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(106222..106582,106830..107003,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..137358))
location: region:106222-137358:-1
so has part: feature:136779-137358:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:106830-107003:-1:exon
so has part: feature:106222-106582:-1:exon

position:137358:-1
position: 137358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136779-137358:-1:exon

position:136779:-1
position: 136779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

position:135935:-1
position: 135935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136003:-1
position: 136003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

position:134217:-1
position: 134217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134271:-1
position: 134271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

position:133309:-1
position: 133309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133439:-1
position: 133439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

position:131252:-1
position: 131252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131870:-1
position: 131870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

position:126614:-1
position: 126614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126759:-1
position: 126759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:124135-124234:-1:exon

position:124135:-1
position: 124135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124234:-1
position: 124234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:121506-121592:-1:exon

position:121506:-1
position: 121506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121592:-1
position: 121592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106830-107003:-1:exon

position:106830:-1
position: 106830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107003:-1
position: 107003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:106222-106582:-1:exon

position:106582:-1
position: 106582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040615122.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(112937..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..136900,137376..137460))
location: region:112937-137460:-1
so has part: feature:137376-137460:-1:exon
so has part: feature:136779-136900:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:112937-114941:-1:exon

position:112937:-1
position: 112937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137376-137460:-1:exon

position:137376:-1
position: 137376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136779-136900:-1:exon

position:136900:-1
position: 136900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112937-114941:-1:exon

position:114941:-1
position: 114941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040615117.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(112937..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..136964,137376..137451))
location: region:112937-137451:-1
so has part: feature:137376-137451:-1:exon
so has part: feature:136779-136964:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:112937-114941:-1:exon

position:137451:-1
position: 137451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137376-137451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136779-136964:-1:exon

position:136964:-1
position: 136964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112937-114941:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040615118.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(112937..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,137376..137449))
location: region:112937-137449:-1
so has part: feature:137376-137449:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:112937-114941:-1:exon

position:137449:-1
position: 137449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137376-137449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112937-114941:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040615121.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(112937..114941,121506..121592,124135..124234,126614..126759,131252..131870,134217..134271,135935..136003,136779..136900,137376..137449))
location: region:112937-137449:-1
so has part: feature:137376-137449:-1:exon
so has part: feature:136779-136900:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:112937-114941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137376-137449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136779-136900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112937-114941:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040615119.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(112937..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135732..135914))
location: region:112937-135914:-1
so has part: feature:135732-135914:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:112937-114941:-1:exon

position:135914:-1
position: 135914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135732-135914:-1:exon

position:135732:-1
position: 135732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112937-114941:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAELCYLHYRTRLPKQGKPDPSREWTSLAAVVKVESAAQREVLASPGNVRVMKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQMWLAASHQQCSIFIPGTETGKWKLRPNITFVFFSSHTPCGDASIIPISKPENQLSKPATGDTAPGRSSECRRNHDHLGSEDNRKSDETESNRVIKRMKTDDDGVFSKITEDLAVQQVSVKQEDDTDPENCECSADTQVANKETGLGRLKVVDVYRTGAKCIPGELGDARTPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVVVGKCPYSEEAMRRAIIERCQHTLLLPEGFVAQEVKLLQSDLRFEHSRQAVQEAQTNGKTKLVPCSAAISWSAVPEQPLDVSSDGFRQGTTKKGIGSHQSRSKICKVELFHGFQKLVRSISQEDLPDTLRMKTLETYWDYKEAALNYQEAWKVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(114809..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..136947))
location: region:114809-136947:-1
so has part: feature:136779-136947:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:114809-114941:-1:exon

XP_040471051.1
type: Protein
SIO_000068: ncbiprotein

position:114809:-1
position: 114809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136947:-1
position: 136947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136779-136947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114809-114941:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQMWLAASHQQCSIFIPGTETGKWKLRPNITFVFFSSHTPCGDASIIPISKPENQLSKPATGDTAPGRSSECRRNHDHLGSEDNRKSDETESNRVIKRMKTDDDGVFSKITEDLAVQQVSVKQEDDTDPENCECSADTQVANKETGLGRLKVVDVYRTGAKCIPGELGDARTPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVVVGKCPYSEEAMRRAIIERCQHTLLLPEGFVAQEVKLLQSDLRFEHSRQAVQEAQTNGKTKLVPCSAAISWSAVPEQPLDVSSDGFRQGTTKKGIGSHQSRSKICKVELFHGFQKLVRSISQEDLPDTLRMKTLETYWDYKEAALNYQEAWKVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(114809..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136001))
location: region:114809-136001:-1
so has part: feature:135935-136001:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:114809-114941:-1:exon

XP_040471052.1
type: Protein
SIO_000068: ncbiprotein

position:136001:-1
position: 136001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135935-136001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114809-114941:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQMWLAASHQQCSIFIPGTETGKWKLRPNITFVFFSSHTPCGDASIIPISKPENQLSKPATGDTAPGRSSECRRNHDHLGSEDNRKSDETESNRVIKRMKTDDDGVFSKITEDLAVQQVSVKQEDDTDPENCECSADTQVANKETGLGRLKVVDVYRTGAKCIPGELGDARTPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVVVGKCPYSEEAMRRAIIERCQHTLLLPEGFVAQEVKLLQSDLRFEHSRQAVQEAQTNGKTKLVPCSAAISWSAVPEQPLDVSSDGFRQGTTKKGIGSHQSRSKICKVELFHGFQKLVRSISQEDLPDTLRMKTLETYWDYKEAALNYQEAWKVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(114809..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136001))
location: region:114809-136001:-1
so has part: feature:135935-136001:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:114809-114941:-1:exon

XP_040471056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135935-136001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114809-114941:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X3
translation: MAALKVCCTCCLKGDILNDSHAEIVAKRSFQRYLLHQMWLAASHQQCSIFIPGTETGKWKLRPNITFVFFSSHTPCGDASIIPISKPENQLSKPATGDTAPGRSSECRRNHDHLGSEDNRKSDETESNRVIKRMKTDDDGVFSKITEDLAVQQVSVKQEDDTDPENCECSADTQVANKETGLGRLKVVDVYRTGAKCIPGELGDARTPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVVVGKCPYSEEAMRRAIIERCQHTLLLPEGFVAQEVKLLQSDLRFEHSRQAVQEAQTNGKTKLVPCSAAISWSAVPEQPLDVSSDGFRQGTTKKGIGSHQSRSKICKVELFHGFQKLVRSISQEDLPDTLRMKTLETYWDYKEAALNYQEAWKVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(114809..114941,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135732..135771))
location: region:114809-135771:-1
so has part: feature:135732-135771:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:114809-114941:-1:exon

XP_040471053.1
type: Protein
SIO_000068: ncbiprotein

position:135771:-1
position: 135771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135732-135771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114809-114941:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X4
translation: MTAMLKLWLRGASRGGDASIIPISKPENQLSKPATGDTAPGRSSECRRNHDHLGSEDNRKSDETESNRVIKRMKTDDDGVFSKITEDLAVQQVSVKQEDDTDPENCECSADTQVANKETGLGRLKVVDVYRTGAKCIPGELGDARTPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVVVGKCPYSEEAMRRAIIERCQHTLLLPEGFVAQEVKLLQSDLRFEHSRQAVQEAQTNGKTKLVPCSAAISWSAVPEQPLDVSSDGFRQGTTKKGIGSHQSRSKICKVELFHGFQKLVRSISQEDLPDTLRMKTLETYWDYKEAALNYQEAWKVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(114809..114941,121506..121592,124135..124234,126614..126759,131252..131870,134217..134259))
location: region:114809-134259:-1
so has part: feature:134217-134259:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:114809-114941:-1:exon

XP_040471055.1
type: Protein
SIO_000068: ncbiprotein

position:134259:-1
position: 134259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134217-134259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114809-114941:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005831090.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(114854..114941,116448..116654,121506..121592,124135..124234,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..137359))
location: region:114854-137359:-1
so has part: feature:136779-137359:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:124135-124234:-1:exon
so has part: feature:121506-121592:-1:exon
so has part: feature:116448-116654:-1:exon
so has part: feature:114854-114941:-1:exon

position:114854:-1
position: 114854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137359:-1
position: 137359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136779-137359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124135-124234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121506-121592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:116448-116654:-1:exon

position:116448:-1
position: 116448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116654:-1
position: 116654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:114854-114941:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005831092.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(124146..124234,125761..125876,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..137360))
location: region:124146-137360:-1
so has part: feature:136779-137360:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:125761-125876:-1:exon
so has part: feature:124146-124234:-1:exon

position:124146:-1
position: 124146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137360:-1
position: 137360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136779-137360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125761-125876:-1:exon

position:125761:-1
position: 125761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125876:-1
position: 125876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:124146-124234:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005831093.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(124243..124394,125761..125876,126614..126759,131252..131870,133309..133439,134217..134271,135935..136003,136779..137360))
location: region:124243-137360:-1
so has part: feature:136779-137360:-1:exon
so has part: feature:135935-136003:-1:exon
so has part: feature:134217-134271:-1:exon
so has part: feature:133309-133439:-1:exon
so has part: feature:131252-131870:-1:exon
so has part: feature:126614-126759:-1:exon
so has part: feature:125761-125876:-1:exon
so has part: feature:124243-124394:-1:exon

position:124243:-1
position: 124243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136779-137360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135935-136003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134217-134271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133309-133439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126614-126759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125761-125876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124243-124394:-1:exon

position:124394:-1
position: 124394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137534..146739)
location: region:137534-146739:-1
so has part: feature:137534-146739:-1:exon
subclass of: SO_0000010

121097801
type: Gene
SIO_000068: ncbigene

position:137534:-1
position: 137534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146739:-1
position: 146739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137534-146739:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615116.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(137534..137657,137847..137990,139660..139786,140066..140151,140849..140934,141677..141850,141947..142109,142344..142463,144182..144307,144482..144668,145000..145093,145499..145664,145871..146021,146611..146739))
location: region:137534-146739:-1
so has part: feature:146611-146739:-1:exon
so has part: feature:145871-146021:-1:exon
so has part: feature:145499-145664:-1:exon
so has part: feature:145000-145093:-1:exon
so has part: feature:144482-144668:-1:exon
so has part: feature:144182-144307:-1:exon
so has part: feature:142344-142463:-1:exon
so has part: feature:141947-142109:-1:exon
so has part: feature:141677-141850:-1:exon
so has part: feature:140849-140934:-1:exon
so has part: feature:140066-140151:-1:exon
so has part: feature:139660-139786:-1:exon
so has part: feature:137847-137990:-1:exon
so has part: feature:137534-137657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146611-146739:-1:exon

position:146611:-1
position: 146611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145871-146021:-1:exon

position:145871:-1
position: 145871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146021:-1
position: 146021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145499-145664:-1:exon

position:145499:-1
position: 145499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145664:-1
position: 145664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145000-145093:-1:exon

position:145000:-1
position: 145000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145093:-1
position: 145093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144482-144668:-1:exon

position:144482:-1
position: 144482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144668:-1
position: 144668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144182-144307:-1:exon

position:144182:-1
position: 144182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144307:-1
position: 144307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:142344-142463:-1:exon

position:142344:-1
position: 142344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142463:-1
position: 142463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141947-142109:-1:exon

position:141947:-1
position: 141947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142109:-1
position: 142109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:141677-141850:-1:exon

position:141677:-1
position: 141677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141850:-1
position: 141850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140849-140934:-1:exon

position:140849:-1
position: 140849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140934:-1
position: 140934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:140066-140151:-1:exon

position:140066:-1
position: 140066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140151:-1
position: 140151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:139660-139786:-1:exon

position:139660:-1
position: 139660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139786:-1
position: 139786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:137847-137990:-1:exon

position:137847:-1
position: 137847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137990:-1
position: 137990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:137534-137657:-1:exon

position:137657:-1
position: 137657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_040615115.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(137534..137657,137847..137990,139660..139786,140066..140151,140849..140934,141677..141850,141947..142109,142344..142463,144182..144307,144482..144668,145000..145093,145499..145664,145871..146021,146421..146597))
location: region:137534-146597:-1
so has part: feature:146421-146597:-1:exon
so has part: feature:145871-146021:-1:exon
so has part: feature:145499-145664:-1:exon
so has part: feature:145000-145093:-1:exon
so has part: feature:144482-144668:-1:exon
so has part: feature:144182-144307:-1:exon
so has part: feature:142344-142463:-1:exon
so has part: feature:141947-142109:-1:exon
so has part: feature:141677-141850:-1:exon
so has part: feature:140849-140934:-1:exon
so has part: feature:140066-140151:-1:exon
so has part: feature:139660-139786:-1:exon
so has part: feature:137847-137990:-1:exon
so has part: feature:137534-137657:-1:exon

position:146597:-1
position: 146597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146421-146597:-1:exon

position:146421:-1
position: 146421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145871-146021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145499-145664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145000-145093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144482-144668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144182-144307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142344-142463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141947-142109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141677-141850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140849-140934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:140066-140151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139660-139786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137847-137990:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137534-137657:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MAAAAANMAAARALETEETESRLSKNELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLISDSENNVGADEESLDPNQYYKIRSHAIQQLKGTDEDPYPHKFHVDIALSDFIEKYGHLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGVEGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYIRRFLDDLGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMVVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRINMLYDLEKVLGVKFPSAECFETEETCKFFDDLCAERNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSLRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSSNIKEVLLFPAMKPEDGKKEAPPGQPAEGTAV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(137571..137657,137847..137990,139660..139786,140066..140151,140849..140934,141677..141850,141947..142109,142344..142463,144182..144307,144482..144668,145000..145093,145499..145664,145871..146021,146611..146687))
location: region:137571-146687:-1
so has part: feature:146611-146687:-1:exon
so has part: feature:145871-146021:-1:exon
so has part: feature:145499-145664:-1:exon
so has part: feature:145000-145093:-1:exon
so has part: feature:144482-144668:-1:exon
so has part: feature:144182-144307:-1:exon
so has part: feature:142344-142463:-1:exon
so has part: feature:141947-142109:-1:exon
so has part: feature:141677-141850:-1:exon
so has part: feature:140849-140934:-1:exon
so has part: feature:140066-140151:-1:exon
so has part: feature:139660-139786:-1:exon
so has part: feature:137847-137990:-1:exon
so has part: feature:137571-137657:-1:exon

XP_040471050.1
type: Protein
SIO_000068: ncbiprotein

position:137571:-1
position: 137571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146687:-1
position: 146687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146611-146687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145871-146021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145499-145664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145000-145093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144482-144668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144182-144307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142344-142463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141947-142109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141677-141850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140849-140934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:140066-140151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139660-139786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137847-137990:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137571-137657:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLSPGAARLRGWAWRTAHRWRQAHHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLISDSENNVGADEESLDPNQYYKIRSHAIQQLKGTDEDPYPHKFHVDIALSDFIEKYGHLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGVEGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYIRRFLDDLGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMVVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRINMLYDLEKVLGVKFPSAECFETEETCKFFDDLCAERNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSLRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSSNIKEVLLFPAMKPEDGKKEAPPGQPAEGTAV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(137571..137657,137847..137990,139660..139786,140066..140151,140849..140934,141677..141850,141947..142109,142344..142463,144182..144307,144482..144668,145000..145093,145499..145664,145871..146021,146421..146506))
location: region:137571-146506:-1
so has part: feature:146421-146506:-1:exon
so has part: feature:145871-146021:-1:exon
so has part: feature:145499-145664:-1:exon
so has part: feature:145000-145093:-1:exon
so has part: feature:144482-144668:-1:exon
so has part: feature:144182-144307:-1:exon
so has part: feature:142344-142463:-1:exon
so has part: feature:141947-142109:-1:exon
so has part: feature:141677-141850:-1:exon
so has part: feature:140849-140934:-1:exon
so has part: feature:140066-140151:-1:exon
so has part: feature:139660-139786:-1:exon
so has part: feature:137847-137990:-1:exon
so has part: feature:137571-137657:-1:exon

XP_040471049.1
type: Protein
SIO_000068: ncbiprotein

position:146506:-1
position: 146506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146421-146506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145871-146021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145499-145664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145000-145093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144482-144668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144182-144307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142344-142463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141947-142109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141677-141850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140849-140934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:140066-140151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139660-139786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137847-137990:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137571-137657:-1:exon

LOC121097807
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 146721..150099
location: region:146721-150099:1
so has part: feature:146721-150099:1:exon
subclass of: SO_0000010

121097807
type: Gene
SIO_000068: ncbigene

position:146721:1
position: 146721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150099:1
position: 150099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146721-150099:1:exon

LOC121097807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097807
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040615133.1
SIO_010081: LOC121097807
subclass of: SO_0000673
so part of: LOC121097807
location: join(146721..147257,147366..147442,147797..150099)
location: region:146721-150099:1
so has part: feature:146721-147257:1:exon
so has part: feature:147366-147442:1:exon
so has part: feature:147797-150099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146721-147257:1:exon

position:147257:1
position: 147257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147366-147442:1:exon

position:147366:1
position: 147366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147442:1
position: 147442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147797-150099:1:exon

position:147797:1
position: 147797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121097807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MAAPGEAVAPLQSRSLFLWDDGTPMRFYVRPGLAKLRLAPLLLAGGGQLCRVQEPGAVLLAQPGEEAPSGAVSTVYVTECVERNQRLPLEPYRLPAAPPAAAAPRGRLAFTEAEDVALLWAVQQQGRARARGRALWKELERAGLTRHSWQAMRDRYLRHLRPRHREPQKTAEPAQTLGIFAAANREFESAESGSDASDITEELSTQNGGGKSLAETVFGLKMGLEDSANGCQEKPREERPASSCSSPSVVGEVVKTMQRFMEHLSMDLLTITQAFLKNTGEVETTLHFLQTGQRLDGYPVWSREDDLELQKDDEHIRNKLIAKFGAENVAKRIAFRKS
SIO_010081: LOC121097807
subclass of: SO_0000673
so part of: LOC121097807
location: join(146762..147257,147366..147442,147797..148240)
location: region:146762-148240:1
so has part: feature:146762-147257:1:exon
so has part: feature:147366-147442:1:exon
so has part: feature:147797-148240:1:exon

XP_040471067.1
type: Protein
SIO_000068: ncbiprotein

position:146762:1
position: 146762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148240:1
position: 148240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146762-147257:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147366-147442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147797-148240:1:exon

LOC121097806
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(150337..160851)
location: region:150337-160851:-1
so has part: feature:150337-160851:-1:exon
subclass of: SO_0000010

121097806
type: Gene
SIO_000068: ncbigene

position:150337:-1
position: 150337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160851:-1
position: 160851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150337-160851:-1:exon

LOC121097806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097806
product: carbohydrate sulfotransferase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040615132.1
SIO_010081: LOC121097806
subclass of: SO_0000673
so part of: LOC121097806
location: complement(join(150337..156154,159968..160851))
location: region:150337-160851:-1
so has part: feature:159968-160851:-1:exon
so has part: feature:150337-156154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159968-160851:-1:exon

position:159968:-1
position: 159968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150337-156154:-1:exon

position:156154:-1
position: 156154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121097806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like
translation: MMNSRRVQVLLILAVLAFLLIHLYFLPCSNNAPMEEKPSPVHVLILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMHQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCRTICGKYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFKSRENTVADLKLDSNIVVGSQRTKGEMGPYNTMQAICKSHVEIYKAGRHAIPSFLKDRYLLVRYEDIVRDPLARAAEMYRFAELHFTPALQKWVHNITHGKGQGAQAFDIGSRDALRVSQAWRETLPFQKIEKVQNVCKDAMELLGYRLIRSEEEQKNMLLDLLFAHNSSE
SIO_010081: LOC121097806
subclass of: SO_0000673
so part of: LOC121097806
location: complement(155002..156141)
location: region:155002-156141:-1
so has part: feature:155002-156141:-1:exon

XP_040471066.1
type: Protein
SIO_000068: ncbiprotein

position:155002:-1
position: 155002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156141:-1
position: 156141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155002-156141:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(166390..175061)
location: region:166390-175061:-1
so has part: feature:166390-175061:-1:exon
subclass of: SO_0000010

121097697
type: Gene
SIO_000068: ncbigene

position:166390:-1
position: 166390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175061:-1
position: 175061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166390-175061:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TAT
product: tyrosine aminotransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040614886.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(166390..167067,167769..167867,168518..168601,169040..169168,170079..170231,170614..170666,171202..171340,171520..171678,172010..172077,172795..172899,173072..173314,174951..175061))
location: region:166390-175061:-1
so has part: feature:174951-175061:-1:exon
so has part: feature:173072-173314:-1:exon
so has part: feature:172795-172899:-1:exon
so has part: feature:172010-172077:-1:exon
so has part: feature:171520-171678:-1:exon
so has part: feature:171202-171340:-1:exon
so has part: feature:170614-170666:-1:exon
so has part: feature:170079-170231:-1:exon
so has part: feature:169040-169168:-1:exon
so has part: feature:168518-168601:-1:exon
so has part: feature:167769-167867:-1:exon
so has part: feature:166390-167067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174951-175061:-1:exon

position:174951:-1
position: 174951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173072-173314:-1:exon

position:173072:-1
position: 173072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173314:-1
position: 173314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172795-172899:-1:exon

position:172795:-1
position: 172795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172899:-1
position: 172899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172010-172077:-1:exon

position:172010:-1
position: 172010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172077:-1
position: 172077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171520-171678:-1:exon

position:171520:-1
position: 171520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171678:-1
position: 171678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171202-171340:-1:exon

position:171202:-1
position: 171202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171340:-1
position: 171340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170614-170666:-1:exon

position:170614:-1
position: 170614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170666:-1
position: 170666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170079-170231:-1:exon

position:170079:-1
position: 170079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170231:-1
position: 170231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169040-169168:-1:exon

position:169040:-1
position: 169040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169168:-1
position: 169168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:168518-168601:-1:exon

position:168518:-1
position: 168518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168601:-1
position: 168601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167769-167867:-1:exon

position:167769:-1
position: 167769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167867:-1
position: 167867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166390-167067:-1:exon

position:167067:-1
position: 167067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TAT
product: tyrosine aminotransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040614887.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(166390..167067,167769..167867,168518..168601,169040..169168,170079..170231,170614..170666,171202..171340,171520..171678,172010..172077,172795..172899,173072..173314,174492..174608,174951..175050))
location: region:166390-175050:-1
so has part: feature:174951-175050:-1:exon
so has part: feature:174492-174608:-1:exon
so has part: feature:173072-173314:-1:exon
so has part: feature:172795-172899:-1:exon
so has part: feature:172010-172077:-1:exon
so has part: feature:171520-171678:-1:exon
so has part: feature:171202-171340:-1:exon
so has part: feature:170614-170666:-1:exon
so has part: feature:170079-170231:-1:exon
so has part: feature:169040-169168:-1:exon
so has part: feature:168518-168601:-1:exon
so has part: feature:167769-167867:-1:exon
so has part: feature:166390-167067:-1:exon

position:175050:-1
position: 175050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174951-175050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174492-174608:-1:exon

position:174492:-1
position: 174492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174608:-1
position: 174608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173072-173314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172795-172899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172010-172077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171520-171678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171202-171340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170614-170666:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170079-170231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169040-169168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:168518-168601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167769-167867:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166390-167067:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVSGHGDHAPMLDVHLKTNGNSVSSGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPRKAMISLSLGDPTVFGNLPTNDEVTQAVKEVLDLGHYNGYAPSVGYQSCREAVAAYYRCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKAWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKSNADLCYAALSAIPGLRPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMMLEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(166924..167067,167769..167867,168518..168601,169040..169168,170079..170231,170614..170666,171202..171340,171520..171678,172010..172077,172795..172899,173072..173306))
location: region:166924-173306:-1
so has part: feature:173072-173306:-1:exon
so has part: feature:172795-172899:-1:exon
so has part: feature:172010-172077:-1:exon
so has part: feature:171520-171678:-1:exon
so has part: feature:171202-171340:-1:exon
so has part: feature:170614-170666:-1:exon
so has part: feature:170079-170231:-1:exon
so has part: feature:169040-169168:-1:exon
so has part: feature:168518-168601:-1:exon
so has part: feature:167769-167867:-1:exon
so has part: feature:166924-167067:-1:exon

XP_040470820.1
type: Protein
SIO_000068: ncbiprotein

position:166924:-1
position: 166924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173306:-1
position: 173306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173072-173306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172795-172899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172010-172077:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171520-171678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171202-171340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170614-170666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170079-170231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169040-169168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168518-168601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167769-167867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166924-167067:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVSGHGDHAPMLDVHLKTNGNSVSSGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPRKAMISLSLGDPTVFGNLPTNDEVTQAVKEVLDLGHYNGYAPSVGYQSCREAVAAYYRCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKAWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKSNADLCYAALSAIPGLRPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMMLEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(166924..167067,167769..167867,168518..168601,169040..169168,170079..170231,170614..170666,171202..171340,171520..171678,172010..172077,172795..172899,173072..173306))
location: region:166924-173306:-1
so has part: feature:173072-173306:-1:exon
so has part: feature:172795-172899:-1:exon
so has part: feature:172010-172077:-1:exon
so has part: feature:171520-171678:-1:exon
so has part: feature:171202-171340:-1:exon
so has part: feature:170614-170666:-1:exon
so has part: feature:170079-170231:-1:exon
so has part: feature:169040-169168:-1:exon
so has part: feature:168518-168601:-1:exon
so has part: feature:167769-167867:-1:exon
so has part: feature:166924-167067:-1:exon

XP_040470821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173072-173306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172795-172899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172010-172077:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171520-171678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171202-171340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170614-170666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170079-170231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169040-169168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168518-168601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167769-167867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166924-167067:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188003..191077
location: region:188003-191077:1
so has part: feature:188003-191077:1:exon
subclass of: SO_0000010

121097699
type: Gene
SIO_000068: ncbigene

position:188003:1
position: 188003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191077:1
position: 191077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188003-191077:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: MARVELD3
product: MARVEL domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_040614888.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(188003..188245,188575..188675,188818..191077)
location: region:188003-191077:1
so has part: feature:188003-188245:1:exon
so has part: feature:188575-188675:1:exon
so has part: feature:188818-191077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188003-188245:1:exon

position:188245:1
position: 188245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188575-188675:1:exon

position:188575:1
position: 188575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188675:1
position: 188675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188818-191077:1:exon

position:188818:1
position: 188818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3
translation: MKASGRPAARGRAGGSSSAVPGAEPQEPPGSRTAAPGLLKCRRCRYLRTGRASCQAVQALLALLALVCGSVSCGPPGGYTGLPDAGGVYYYQYGGAYSGFGGAEGERAQQLDQRFHLLKLPAGRAAMAAGGALLLFSCLLVLVGVLRLPWHFPAWLLLECILDTVIAVGMVPALYCFFSFLLGVYNSSVCKERELLYQSKGYQGFKCSLHGAEIATGLLGCAAGMAYLLGAGLAARAYRTVHKLKHNPEQLYEV
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(188193..188245,188575..188675,188818..189428)
location: region:188193-189428:1
so has part: feature:188193-188245:1:exon
so has part: feature:188575-188675:1:exon
so has part: feature:188818-189428:1:exon

XP_040470822.1
type: Protein
SIO_000068: ncbiprotein

position:188193:1
position: 188193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189428:1
position: 189428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188193-188245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188575-188675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188818-189428:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190972..231891)
location: region:190972-231891:-1
so has part: feature:190972-231891:-1:exon
subclass of: SO_0000010

121097696
type: Gene
SIO_000068: ncbigene

position:190972:-1
position: 190972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231891:-1
position: 231891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190972-231891:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040614881.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(190972..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231891))
location: region:190972-231891:-1
so has part: feature:231728-231891:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:190972-196060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231728-231891:-1:exon

position:231728:-1
position: 231728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

position:231158:-1
position: 231158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231402:-1
position: 231402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

position:222150:-1
position: 222150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222283:-1
position: 222283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

position:217603:-1
position: 217603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217793:-1
position: 217793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

position:217042:-1
position: 217042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217167:-1
position: 217167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

position:215692:-1
position: 215692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215846:-1
position: 215846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

position:211569:-1
position: 211569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211715:-1
position: 211715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

position:209397:-1
position: 209397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209627:-1
position: 209627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

position:208498:-1
position: 208498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208700:-1
position: 208700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

position:207933:-1
position: 207933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207993:-1
position: 207993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

position:207099:-1
position: 207099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207194:-1
position: 207194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

position:205066:-1
position: 205066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205221:-1
position: 205221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

position:204116:-1
position: 204116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204316:-1
position: 204316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

position:201321:-1
position: 201321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201483:-1
position: 201483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

position:200672:-1
position: 200672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200802:-1
position: 200802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

position:200159:-1
position: 200159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200269:-1
position: 200269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

position:199504:-1
position: 199504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199692:-1
position: 199692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

position:199138:-1
position: 199138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199369:-1
position: 199369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:190972-196060:-1:exon

position:196060:-1
position: 196060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040614882.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(190972..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,229521..229600,231158..231331))
location: region:190972-231331:-1
so has part: feature:231158-231331:-1:exon
so has part: feature:229521-229600:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:190972-196060:-1:exon

position:231331:-1
position: 231331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231158-231331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229521-229600:-1:exon

position:229521:-1
position: 229521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229600:-1
position: 229600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190972-196060:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040614883.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(190972..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,229521..229709,231158..231242))
location: region:190972-231242:-1
so has part: feature:231158-231242:-1:exon
so has part: feature:229521-229709:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:190972-196060:-1:exon

position:231242:-1
position: 231242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231158-231242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229521-229709:-1:exon

position:229709:-1
position: 229709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190972-196060:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040614884.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(190972..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217680..217786))
location: region:190972-217786:-1
so has part: feature:217680-217786:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:190972-196060:-1:exon

position:217786:-1
position: 217786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217680-217786:-1:exon

position:217680:-1
position: 217680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:190972-196060:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X1
translation: MGEAGPGLGAGPGPRETPEPEEDEAAAPGGARGGRAGPRGGIRVLKRNVKRNGSRSRLIRSRFGSRERDWLKEDVGRGCVYLYGKDSAATASSDLRLVLCTVDTLASEICDGEGRKNLFLQLHGDLVRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEELPEHLFYSQDIIYLNLRHNFMRSSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLRYLPSQIGKLLNLQTFWLDGNFLTSLPEELGGLQQLSCLGLSFNNFCELPAICEKLIILDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVADTLKGNKSVTYMDLRDNQMTDLDLSSLCSLEQLHCERNKLKELTLSGFSLRALYANSNCLTAVNIYPVPGQLTCLELSHNQLQCVPDWACEAKKLEVLDASYNLLVELPSRILSSLSLRKLMMGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPSLRILHLANNNLQTFPASKLGKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNDLTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALSSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGIFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDVADPASNFSLTVANVGTCQAILCRSGKPLPLSKVFSLEQCSEEAKRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKSLWEHLSYAEAISAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGLTLPVAGGFSSSATKPVTPSSSSGIASEFSSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLESEPPAEYRSSAPGPEDDSGLVLIIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQENGLDQEQKEEHAAILPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(194924..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231865))
location: region:194924-231865:-1
so has part: feature:231728-231865:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:194924-196060:-1:exon

XP_040470815.1
type: Protein
SIO_000068: ncbiprotein

position:194924:-1
position: 194924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231865:-1
position: 231865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231728-231865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:194924-196060:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X2
translation: MRWRREEKPLFAASWRPGQEAGLSGTCLRDYRKMTECSRYPHALLRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEELPEHLFYSQDIIYLNLRHNFMRSSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLRYLPSQIGKLLNLQTFWLDGNFLTSLPEELGGLQQLSCLGLSFNNFCELPAICEKLIILDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVADTLKGNKSVTYMDLRDNQMTDLDLSSLCSLEQLHCERNKLKELTLSGFSLRALYANSNCLTAVNIYPVPGQLTCLELSHNQLQCVPDWACEAKKLEVLDASYNLLVELPSRILSSLSLRKLMMGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPSLRILHLANNNLQTFPASKLGKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNDLTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALSSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGIFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDVADPASNFSLTVANVGTCQAILCRSGKPLPLSKVFSLEQCSEEAKRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKSLWEHLSYAEAISAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGLTLPVAGGFSSSATKPVTPSSSSGIASEFSSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLESEPPAEYRSSAPGPEDDSGLVLIIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQENGLDQEQKEEHAAILPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(194924..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,229521..229600,231158..231214))
location: region:194924-231214:-1
so has part: feature:231158-231214:-1:exon
so has part: feature:229521-229600:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:194924-196060:-1:exon

XP_040470816.1
type: Protein
SIO_000068: ncbiprotein

position:231214:-1
position: 231214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231158-231214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229521-229600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:194924-196060:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X3
translation: MTECSRYPHALLRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEELPEHLFYSQDIIYLNLRHNFMRSSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLRYLPSQIGKLLNLQTFWLDGNFLTSLPEELGGLQQLSCLGLSFNNFCELPAICEKLIILDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVADTLKGNKSVTYMDLRDNQMTDLDLSSLCSLEQLHCERNKLKELTLSGFSLRALYANSNCLTAVNIYPVPGQLTCLELSHNQLQCVPDWACEAKKLEVLDASYNLLVELPSRILSSLSLRKLMMGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPSLRILHLANNNLQTFPASKLGKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNDLTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALSSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGIFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDVADPASNFSLTVANVGTCQAILCRSGKPLPLSKVFSLEQCSEEAKRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKSLWEHLSYAEAISAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGLTLPVAGGFSSSATKPVTPSSSSGIASEFSSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLESEPPAEYRSSAPGPEDDSGLVLIIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQENGLDQEQKEEHAAILPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(194924..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,229521..229558))
location: region:194924-229558:-1
so has part: feature:229521-229558:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:194924-196060:-1:exon

XP_040470817.1
type: Protein
SIO_000068: ncbiprotein

position:229558:-1
position: 229558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229521-229558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194924-196060:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X4
translation: MKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEELPEHLFYSQDIIYLNLRHNFMRSSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLRYLPSQIGKLLNLQTFWLDGNFLTSLPEELGGLQQLSCLGLSFNNFCELPAICEKLIILDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVADTLKGNKSVTYMDLRDNQMTDLDLSSLCSLEQLHCERNKLKELTLSGFSLRALYANSNCLTAVNIYPVPGQLTCLELSHNQLQCVPDWACEAKKLEVLDASYNLLVELPSRILSSLSLRKLMMGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPSLRILHLANNNLQTFPASKLGKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNDLTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALSSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGIFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDVADPASNFSLTVANVGTCQAILCRSGKPLPLSKVFSLEQCSEEAKRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKSLWEHLSYAEAISAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGLTLPVAGGFSSSATKPVTPSSSSGIASEFSSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLESEPPAEYRSSAPGPEDDSGLVLIIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQENGLDQEQKEEHAAILPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(194924..196060,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217158))
location: region:194924-217158:-1
so has part: feature:217042-217158:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:194924-196060:-1:exon

XP_040470818.1
type: Protein
SIO_000068: ncbiprotein

position:217158:-1
position: 217158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217042-217158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:194924-196060:-1:exon

PHLPP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005831053.1
SIO_010081: PHLPP2
so part of: PHLPP2
location: complement(join(195975..196060,197555..197659,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231891))
location: region:195975-231891:-1
so has part: feature:231728-231891:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
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so has part: feature:197555-197659:-1:exon
so has part: feature:195975-196060:-1:exon

position:195975:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:231728-231891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197555-197659:-1:exon

position:197555:-1
position: 197555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197659:-1
position: 197659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:195975-196060:-1:exon

PHLPP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005831052.1
SIO_010081: PHLPP2
so part of: PHLPP2
location: complement(join(195975..196060,197555..197739,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231891))
location: region:195975-231891:-1
so has part: feature:231728-231891:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199504-199692:-1:exon
so has part: feature:199138-199369:-1:exon
so has part: feature:197555-197739:-1:exon
so has part: feature:195975-196060:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

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SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
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SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197555-197739:-1:exon

position:197739:-1
position: 197739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:195975-196060:-1:exon

PHLPP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005831051.1
SIO_010081: PHLPP2
so part of: PHLPP2
location: complement(join(195975..196060,197555..197742,199138..199369,199504..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231891))
location: region:195975-231891:-1
so has part: feature:231728-231891:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
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so has part: feature:200159-200269:-1:exon
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so has part: feature:199138-199369:-1:exon
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so has part: feature:195975-196060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231728-231891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

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SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199504-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199138-199369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197555-197742:-1:exon

position:197742:-1
position: 197742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:195975-196060:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040614885.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(199192..199369,199557..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231891))
location: region:199192-231891:-1
so has part: feature:231728-231891:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199557-199692:-1:exon
so has part: feature:199192-199369:-1:exon

position:199192:-1
position: 199192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231728-231891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

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SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199557-199692:-1:exon

position:199557:-1
position: 199557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:199192-199369:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X5
translation: MGEAGPGLGAGPGPRETPEPEEDEAAAPGGARGGRAGPRGGIRVLKRNVKRNGSRSRLIRSRFGSRERDWLKEDVGRGCVYLYGKDSAATASSDLRLVLCTVDTLASEICDGEGRKNLFLQLHGDLVRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEELPEHLFYSQDIIYLNLRHNFMRSSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLRYLPSQIGKLLNLQTFWLDGNFLTSLPEELGGLQQLSCLGLSFNNFCELPAICEKLIILDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVADTLKGNKSVTYMDLRDNQMTDLDLSSLCSLEQLHCERNKLKELTLSGFSLRALYANSNCLTAVNIYPVPGQLTCLELSHNQLQCVPDWACEAKKLEVLDASYNLLVELPSRILSSLSLRKLMMGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPSLRILHLANNNLQTFPASKLGKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNDLTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHITTLKIDAKPSLTADSALSSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGIFDGDKNEELPRLLQCTMADVLLEEEAGHGWTEAGFLCCPVLYSS
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(199307..199369,199557..199692,200159..200269,200672..200802,201321..201483,204116..204316,205066..205221,207099..207194,207933..207993,208498..208700,209397..209627,211569..211715,215692..215846,217042..217167,217603..217793,222150..222283,231158..231402,231728..231865))
location: region:199307-231865:-1
so has part: feature:231728-231865:-1:exon
so has part: feature:231158-231402:-1:exon
so has part: feature:222150-222283:-1:exon
so has part: feature:217603-217793:-1:exon
so has part: feature:217042-217167:-1:exon
so has part: feature:215692-215846:-1:exon
so has part: feature:211569-211715:-1:exon
so has part: feature:209397-209627:-1:exon
so has part: feature:208498-208700:-1:exon
so has part: feature:207933-207993:-1:exon
so has part: feature:207099-207194:-1:exon
so has part: feature:205066-205221:-1:exon
so has part: feature:204116-204316:-1:exon
so has part: feature:201321-201483:-1:exon
so has part: feature:200672-200802:-1:exon
so has part: feature:200159-200269:-1:exon
so has part: feature:199557-199692:-1:exon
so has part: feature:199307-199369:-1:exon

XP_040470819.1
type: Protein
SIO_000068: ncbiprotein

position:199307:-1
position: 199307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231728-231865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231158-231402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222150-222283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217603-217793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217042-217167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215692-215846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211569-211715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209397-209627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208498-208700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207933-207993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:207099-207194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205066-205221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:204116-204316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201321-201483:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:200672-200802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:200159-200269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:199557-199692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:199307-199369:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(233647..285840)
location: region:233647-285840:-1
so has part: feature:233647-285840:-1:exon
subclass of: SO_0000010

121097700
type: Gene
SIO_000068: ncbigene

position:233647:-1
position: 233647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285840:-1
position: 285840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233647-285840:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040614891.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(233647..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,259732..259808,262050..262146,263401..263542,265904..266028,270639..270842,285558..285835))
location: region:233647-285835:-1
so has part: feature:285558-285835:-1:exon
so has part: feature:270639-270842:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:233647-237554:-1:exon

position:285835:-1
position: 285835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285558-285835:-1:exon

position:285558:-1
position: 285558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270639-270842:-1:exon

position:270639:-1
position: 270639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270842:-1
position: 270842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265904-266028:-1:exon

position:265904:-1
position: 265904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266028:-1
position: 266028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263401-263542:-1:exon

position:263401:-1
position: 263401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263542:-1
position: 263542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262050-262146:-1:exon

position:262050:-1
position: 262050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262146:-1
position: 262146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:259732-259808:-1:exon

position:259732:-1
position: 259732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259808:-1
position: 259808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:256138-256233:-1:exon

position:256138:-1
position: 256138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256233:-1
position: 256233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:255732-255812:-1:exon

position:255732:-1
position: 255732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255812:-1
position: 255812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:255383-255481:-1:exon

position:255383:-1
position: 255383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255481:-1
position: 255481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:254918-254973:-1:exon

position:254918:-1
position: 254918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254973:-1
position: 254973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:253949-254062:-1:exon

position:253949:-1
position: 253949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254062:-1
position: 254062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:248765-248905:-1:exon

position:248765:-1
position: 248765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248905:-1
position: 248905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:248031-248085:-1:exon

position:248031:-1
position: 248031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248085:-1
position: 248085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:246424-246546:-1:exon

position:246424:-1
position: 246424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246546:-1
position: 246546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:246020-246109:-1:exon

position:246020:-1
position: 246020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246109:-1
position: 246109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:245398-245525:-1:exon

position:245398:-1
position: 245398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245525:-1
position: 245525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:244661-244765:-1:exon

position:244661:-1
position: 244661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244765:-1
position: 244765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:242380-242521:-1:exon

position:242380:-1
position: 242380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242521:-1
position: 242521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:241792-241918:-1:exon

position:241792:-1
position: 241792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241918:-1
position: 241918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:241242-241337:-1:exon

position:241242:-1
position: 241242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241337:-1
position: 241337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:240820-240980:-1:exon

position:240820:-1
position: 240820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240980:-1
position: 240980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:239941-240039:-1:exon

position:239941:-1
position: 239941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240039:-1
position: 240039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:233647-237554:-1:exon

position:237554:-1
position: 237554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 48 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040614889.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(233647..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270842,285558..285835))
location: region:233647-285835:-1
so has part: feature:285558-285835:-1:exon
so has part: feature:270639-270842:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:233647-237554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285558-285835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270639-270842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258572-258580:-1:exon

position:258572:-1
position: 258572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258580:-1
position: 258580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:233647-237554:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040614890.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(233647..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270842,283046..283096))
location: region:233647-283096:-1
so has part: feature:283046-283096:-1:exon
so has part: feature:270639-270842:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:233647-237554:-1:exon

position:283096:-1
position: 283096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283046-283096:-1:exon

position:283046:-1
position: 283046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270639-270842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258572-258580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:233647-237554:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQATEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPASQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPVPQIAQPPFLLDGLSSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(237453..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,259732..259808,262050..262146,263401..263542,265904..266028,270639..270839))
location: region:237453-270839:-1
so has part: feature:270639-270839:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:237453-237554:-1:exon

XP_040470825.1
type: Protein
SIO_000068: ncbiprotein

position:237453:-1
position: 237453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270839:-1
position: 270839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270639-270839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:237453-237554:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQATEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPASQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPVPQIAQPPFLLDGLSSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(237453..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270839))
location: region:237453-270839:-1
so has part: feature:270639-270839:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:237453-237554:-1:exon

XP_040470823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270639-270839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258572-258580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:237453-237554:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQATEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPASQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPVPQIAQPPFLLDGLSSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(237453..237554,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270839))
location: region:237453-270839:-1
so has part: feature:270639-270839:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:237453-237554:-1:exon

XP_040470824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270639-270839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258572-258580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:237453-237554:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040614893.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(238913..239361,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270842,285558..285840))
location: region:238913-285840:-1
so has part: feature:285558-285840:-1:exon
so has part: feature:270639-270842:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:238913-239361:-1:exon

position:238913:-1
position: 238913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285558-285840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270639-270842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258572-258580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:238913-239361:-1:exon

position:239361:-1
position: 239361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X3
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQATEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPASQANDLLDLLGGSDITPVIPTAPTSKPASAGGELLDLLGDLNLTGSPVSAPVPQIAQPPFLLDGLSSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKPSEAGLKTVIQQT
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(239320..239361,239941..240039,240820..240980,241242..241337,241792..241918,242380..242521,244661..244765,245398..245525,246020..246109,246424..246546,248031..248085,248765..248905,253949..254062,254918..254973,255383..255481,255732..255812,256138..256233,258572..258580,259732..259808,262050..262146,263401..263542,265904..266028,270639..270839))
location: region:239320-270839:-1
so has part: feature:270639-270839:-1:exon
so has part: feature:265904-266028:-1:exon
so has part: feature:263401-263542:-1:exon
so has part: feature:262050-262146:-1:exon
so has part: feature:259732-259808:-1:exon
so has part: feature:258572-258580:-1:exon
so has part: feature:256138-256233:-1:exon
so has part: feature:255732-255812:-1:exon
so has part: feature:255383-255481:-1:exon
so has part: feature:254918-254973:-1:exon
so has part: feature:253949-254062:-1:exon
so has part: feature:248765-248905:-1:exon
so has part: feature:248031-248085:-1:exon
so has part: feature:246424-246546:-1:exon
so has part: feature:246020-246109:-1:exon
so has part: feature:245398-245525:-1:exon
so has part: feature:244661-244765:-1:exon
so has part: feature:242380-242521:-1:exon
so has part: feature:241792-241918:-1:exon
so has part: feature:241242-241337:-1:exon
so has part: feature:240820-240980:-1:exon
so has part: feature:239941-240039:-1:exon
so has part: feature:239320-239361:-1:exon

XP_040470827.1
type: Protein
SIO_000068: ncbiprotein

position:239320:-1
position: 239320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270639-270839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265904-266028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263401-263542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262050-262146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259732-259808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258572-258580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256138-256233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255732-255812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255383-255481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254918-254973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253949-254062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248765-248905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248031-248085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246424-246546:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246020-246109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245398-245525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244661-244765:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:242380-242521:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:241792-241918:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:241242-241337:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:240820-240980:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:239941-240039:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:239320-239361:-1:exon

LOC121098171
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098171
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(252452..252538)
location: region:252452-252538:-1
so has part: feature:252452-252538:-1:exon
subclass of: SO_0000578

121098171
type: Gene
SIO_000068: ncbigene

position:252452:-1
position: 252452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252538:-1
position: 252538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252452-252538:-1:exon

LOC121098171
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: snoRNA
gene: LOC121098171
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005831198.1
SIO_010081: LOC121098171
subclass of: SO_0000673
so part of: LOC121098171
location: complement(252452..252538)
location: region:252452-252538:-1
so has part: feature:252452-252538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252452-252538:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 287021..294190
location: region:287021-294190:1
so has part: feature:287021-294190:1:exon
subclass of: SO_0000010

121097994
type: Gene
SIO_000068: ncbigene

position:287021:1
position: 287021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294190:1
position: 294190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287021-294190:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ATXN1L
product: ataxin 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040615490.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(287021..287105,287430..294190)
location: region:287021-294190:1
so has part: feature:287021-287105:1:exon
so has part: feature:287430-294190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287021-287105:1:exon

position:287105:1
position: 287105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287430-294190:1:exon

position:287430:1
position: 287430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ATXN1L
product: ataxin 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040615491.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(287021..287105,287430..289135,293434..294190)
location: region:287021-294190:1
so has part: feature:287021-287105:1:exon
so has part: feature:287430-289135:1:exon
so has part: feature:293434-294190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287021-287105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287430-289135:1:exon

position:289135:1
position: 289135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293434-294190:1:exon

position:293434:1
position: 293434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ATXN1L
product: ataxin 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040615492.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(287021..287105,287430..289027,293434..294190)
location: region:287021-294190:1
so has part: feature:287021-287105:1:exon
so has part: feature:287430-289027:1:exon
so has part: feature:293434-294190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287021-287105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287430-289027:1:exon

position:289027:1
position: 289027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293434-294190:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like isoform X2
translation: MRAGHERSQECLPPKKRELPTASTGTETGRAGLAQASGEGPDWTRAAGPGPAALHYGPGEATEAVAGLTVDQYGMLYKVAVPPATFSPTGLHSVVNVSPLPPTFNMTSPIIQHPGVPYPPIHYAQIPPASLQFIGSHYTVPYAVPPGFLPSPLLSPSTNITASHVPHFVPYASLFTEEAAPSPQTTSPTHTFNKSASAISPSGQMQHHAGTQPLDIAPGRIPVYYQMSRFPPGYSAYETPTTGGSPESLQQDSHPSSEVAAANGGQRHLEHSVVRRTSEAADSASSKAEDCLPGAVAGCVVDGQFLSGYQTLGTEVSVPAHRSTPDTDLEVQRVVGVLASQDYHILAAQRKDDPSPLNLCHNIPDQQGESKDVLRNPAERAAAEKSQSRSPYVMSPEEPVRQRQLTKGMVIANGKPVLVPAGSEPTRSSTSETLVRRSPDAQAGGSALEKDLVQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKAVLGPETLQKLLRWLRMHILYRVWPRVCSTYGLKC
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(287540..289135,293434..293541)
location: region:287540-293541:1
so has part: feature:287540-289135:1:exon
so has part: feature:293434-293541:1:exon

XP_040471425.1
type: Protein
SIO_000068: ncbiprotein

position:287540:1
position: 287540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293541:1
position: 293541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287540-289135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293434-293541:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like isoform X3
translation: MRAGHERSQECLPPKKRELPTASTGTETGRAGLAQASGEGPDWTRAAGPGPAALHYGPGEATEAVAGLTVDQYGMLYKVAVPPATFSPTGLHSVVNVSPLPPTFNMTSPIIQHPGVPYPPIHYAQIPPASLQFIGSHYTVPYAVPPGFLPSPLLSPSTNITASHVPHFVPYASLFTEEAAPSPQTTSPTHTFNKSASAISPSGQMQHHAGTQPLDIAPGRIPVYYQMSRFPPGYSAYETPTTGGSPESLQQDSHPSSEVAAANGGQRHLEHSVVRRTSEAADSASSKAEDCLPGAVAGCVVDGQFLSGYQTLGTEVSVPAHRSTPDTDLEVQRVVGVLASQDYHILAAQRKDDPSPLNLCHNIPDQQGESKDVLRNPAERAAAEKSQSRSPYVMSPEEPVRQRQLTKGMVIANGKPVLVPAGSEPTRSSTSETLVRRSPDAQAGGSALEKDLVQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEAVLGPETLQKLLRWLRMHILYRVWPRVCSTYGLKC
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(287540..289027,293434..293541)
location: region:287540-293541:1
so has part: feature:287540-289027:1:exon
so has part: feature:293434-293541:1:exon

XP_040471426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287540-289027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293434-293541:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like isoform X1
translation: MRAGHERSQECLPPKKRELPTASTGTETGRAGLAQASGEGPDWTRAAGPGPAALHYGPGEATEAVAGLTVDQYGMLYKVAVPPATFSPTGLHSVVNVSPLPPTFNMTSPIIQHPGVPYPPIHYAQIPPASLQFIGSHYTVPYAVPPGFLPSPLLSPSTNITASHVPHFVPYASLFTEEAAPSPQTTSPTHTFNKSASAISPSGQMQHHAGTQPLDIAPGRIPVYYQMSRFPPGYSAYETPTTGGSPESLQQDSHPSSEVAAANGGQRHLEHSVVRRTSEAADSASSKAEDCLPGAVAGCVVDGQFLSGYQTLGTEVSVPAHRSTPDTDLEVQRVVGVLASQDYHILAAQRKDDPSPLNLCHNIPDQQGESKDVLRNPAERAAAEKSQSRSPYVMSPEEPVRQRQLTKGMVIANGKPVLVPAGSEPTRSSTSETLVRRSPDAQAGGSALEKDLVQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTGQLFALPCHRLQVGDVCISISLQSMNGSSASQANYPLTDQLLSTRERSERTAQGSREPSDRAAERKSHTDRDSAAQSSPVESSQPETGSQHSWTAPGFQRYSMQAEEPRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 287540..289618
location: region:287540-289618:1
so has part: feature:287540-289618:1:exon

XP_040471424.1
type: Protein
SIO_000068: ncbiprotein

position:289618:1
position: 289618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287540-289618:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296828..310797)
location: region:296828-310797:-1
so has part: feature:296828-310797:-1:exon
subclass of: SO_0000010

121097996
type: Gene
SIO_000068: ncbigene

position:296828:-1
position: 296828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310797:-1
position: 310797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296828-310797:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040615498.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(296828..297741,298466..298632,299538..299642,300198..300340,300855..300980,307861..307952,310182..310388,310585..310797))
location: region:296828-310797:-1
so has part: feature:310585-310797:-1:exon
so has part: feature:310182-310388:-1:exon
so has part: feature:307861-307952:-1:exon
so has part: feature:300855-300980:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:296828-297741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310585-310797:-1:exon

position:310585:-1
position: 310585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310182-310388:-1:exon

position:310182:-1
position: 310182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310388:-1
position: 310388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307861-307952:-1:exon

position:307861:-1
position: 307861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307952:-1
position: 307952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300855-300980:-1:exon

position:300855:-1
position: 300855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300980:-1
position: 300980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300198-300340:-1:exon

position:300198:-1
position: 300198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300340:-1
position: 300340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299538-299642:-1:exon

position:299538:-1
position: 299538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299642:-1
position: 299642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:298466-298632:-1:exon

position:298466:-1
position: 298466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298632:-1
position: 298632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296828-297741:-1:exon

position:297741:-1
position: 297741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF821
product: zinc finger protein 821, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040615499.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(296828..297741,298466..298632,299538..299642,300198..300340,300855..300980,307861..307952,309941..310042))
location: region:296828-310042:-1
so has part: feature:309941-310042:-1:exon
so has part: feature:307861-307952:-1:exon
so has part: feature:300855-300980:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:296828-297741:-1:exon

position:310042:-1
position: 310042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309941-310042:-1:exon

position:309941:-1
position: 309941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307861-307952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300855-300980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296828-297741:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF821
product: zinc finger protein 821, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040615500.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(296828..297741,298466..298632,299538..299642,300198..300340,300855..300980,301076..301186,307861..307952))
location: region:296828-307952:-1
so has part: feature:307861-307952:-1:exon
so has part: feature:301076-301186:-1:exon
so has part: feature:300855-300980:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:296828-297741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307861-307952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301076-301186:-1:exon

position:301076:-1
position: 301076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301186:-1
position: 301186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300855-300980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296828-297741:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040615497.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(296828..297741,298466..298632,299538..299642,300198..300340,300855..301186,307861..307952))
location: region:296828-307952:-1
so has part: feature:307861-307952:-1:exon
so has part: feature:300855-301186:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:296828-297741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307861-307952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300855-301186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296828-297741:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNNFPGALGDQRPAIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAEQPVAGTPLMRENEVPESLNADPMVGLSQCPLCQMECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(297087..297741,298466..298632,299538..299642,300198..300340,300855..300980,307861..307900))
location: region:297087-307900:-1
so has part: feature:307861-307900:-1:exon
so has part: feature:300855-300980:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:297087-297741:-1:exon

XP_040471432.1
type: Protein
SIO_000068: ncbiprotein

position:297087:-1
position: 297087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307900:-1
position: 307900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307861-307900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300855-300980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297087-297741:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNNFPGALGDQRPAIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAEQPVAGTPLMRENEVPESLNADPMVGLSQCPLCQMECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(297087..297741,298466..298632,299538..299642,300198..300340,300855..300980,307861..307900))
location: region:297087-307900:-1
so has part: feature:307861-307900:-1:exon
so has part: feature:300855-300980:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:297087-297741:-1:exon

XP_040471433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307861-307900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300855-300980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297087-297741:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MEQHQSNSLSLWLLGEQVFAGLEEQARQAMMKNNFPGALGDQRPAIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAEQPVAGTPLMRENEVPESLNADPMVGLSQCPLCQMECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(297087..297741,298466..298632,299538..299642,300198..300340,300855..301023))
location: region:297087-301023:-1
so has part: feature:300855-301023:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:297087-297741:-1:exon

XP_040471431.1
type: Protein
SIO_000068: ncbiprotein

position:301023:-1
position: 301023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300855-301023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297087-297741:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X3
translation: MMKNNFPGALGDQRPAIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAEQPVAGTPLMRENEVPESLNADPMVGLSQCPLCQMECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPAGILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(297087..297741,298466..298632,299538..299642,300198..300340,300855..300936))
location: region:297087-300936:-1
so has part: feature:300855-300936:-1:exon
so has part: feature:300198-300340:-1:exon
so has part: feature:299538-299642:-1:exon
so has part: feature:298466-298632:-1:exon
so has part: feature:297087-297741:-1:exon

XP_040471434.1
type: Protein
SIO_000068: ncbiprotein

position:300936:-1
position: 300936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300855-300936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300198-300340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299538-299642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298466-298632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297087-297741:-1:exon

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 311031..319622
location: region:311031-319622:1
so has part: feature:311031-319622:1:exon
subclass of: SO_0000010

121097998
type: Gene
SIO_000068: ncbigene

position:311031:1
position: 311031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319622:1
position: 319622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311031-319622:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615503.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(311031..311147,313011..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319622)
location: region:311031-319622:1
so has part: feature:311031-311147:1:exon
so has part: feature:313011-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311031-311147:1:exon

position:311147:1
position: 311147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313011-313110:1:exon

position:313011:1
position: 313011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313110:1
position: 313110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313779-313959:1:exon

position:313779:1
position: 313779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313959:1
position: 313959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314225-314312:1:exon

position:314225:1
position: 314225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314312:1
position: 314312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314650-314733:1:exon

position:314650:1
position: 314650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314733:1
position: 314733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315116-315226:1:exon

position:315116:1
position: 315116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315226:1
position: 315226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315599-315805:1:exon

position:315599:1
position: 315599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315805:1
position: 315805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:316837-316929:1:exon

position:316837:1
position: 316837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316929:1
position: 316929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318085-318130:1:exon

position:318085:1
position: 318085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318130:1
position: 318130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:319299-319622:1:exon

position:319299:1
position: 319299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040615504.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(311109..311193,313011..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319622)
location: region:311109-319622:1
so has part: feature:311109-311193:1:exon
so has part: feature:313011-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319622:1:exon

position:311109:1
position: 311109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311109-311193:1:exon

position:311193:1
position: 311193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313011-313110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313779-313959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:319299-319622:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040615505.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(311464..311571,313011..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319622)
location: region:311464-319622:1
so has part: feature:311464-311571:1:exon
so has part: feature:313011-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319622:1:exon

position:311464:1
position: 311464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311464-311571:1:exon

position:311571:1
position: 311571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313011-313110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313779-313959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:319299-319622:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040615506.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(313009..313110,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319622)
location: region:313009-319622:1
so has part: feature:313009-313110:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319622:1:exon

position:313009:1
position: 313009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313009-313110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319299-319622:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEAVLIDVGFTDDVKKGGHGGGGGGGFTAPLVGHDGIVPMPVMMPMPMPTPNPPFSYPPPKGPENFSDLPVGTYQPFTNIHPPPIPATPPTYESIDEPNADKDASVPVAGPGPKPEASPKPKAGAPNTFDNFVLPELPSVPDTLPTASTGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(313023..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319498)
location: region:313023-319498:1
so has part: feature:313023-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319498:1:exon

XP_040471437.1
type: Protein
SIO_000068: ncbiprotein

position:313023:1
position: 313023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319498:1
position: 319498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313023-313110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313779-313959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319299-319498:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEAVLIDVGFTDDVKKGGHGGGGGGGFTAPLVGHDGIVPMPVMMPMPMPTPNPPFSYPPPKGPENFSDLPVGTYQPFTNIHPPPIPATPPTYESIDEPNADKDASVPVAGPGPKPEASPKPKAGAPNTFDNFVLPELPSVPDTLPTASTGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(313023..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319498)
location: region:313023-319498:1
so has part: feature:313023-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319498:1:exon

XP_040471438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313023-313110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313779-313959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319299-319498:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEAVLIDVGFTDDVKKGGHGGGGGGGFTAPLVGHDGIVPMPVMMPMPMPTPNPPFSYPPPKGPENFSDLPVGTYQPFTNIHPPPIPATPPTYESIDEPNADKDASVPVAGPGPKPEASPKPKAGAPNTFDNFVLPELPSVPDTLPTASTGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(313023..313110,313779..313959,314225..314312,314650..314733,315116..315226,315599..315805,316837..316929,318085..318130,319299..319498)
location: region:313023-319498:1
so has part: feature:313023-313110:1:exon
so has part: feature:313779-313959:1:exon
so has part: feature:314225-314312:1:exon
so has part: feature:314650-314733:1:exon
so has part: feature:315116-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319498:1:exon

XP_040471439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313023-313110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313779-313959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314225-314312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314650-314733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315116-315226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319299-319498:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEAVLIDVGFTDDVKKGGHGGGGGGGFTAPLVGHDGIVPMPVMMPMPMPTPNPPFSYPPPKGPENFSDLPVGTYQPFTNIHPPPIPATPPTYESIDEPNADKDASVPVAGPGPKPEASPKPKAGAPNTFDNFVLPELPSVPDTLPTASTGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(315119..315226,315599..315805,316837..316929,318085..318130,319299..319498)
location: region:315119-319498:1
so has part: feature:315119-315226:1:exon
so has part: feature:315599-315805:1:exon
so has part: feature:316837-316929:1:exon
so has part: feature:318085-318130:1:exon
so has part: feature:319299-319498:1:exon

XP_040471440.1
type: Protein
SIO_000068: ncbiprotein

position:315119:1
position: 315119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315119-315226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315599-315805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316837-316929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318085-318130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319299-319498:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320598..324784
location: region:320598-324784:1
so has part: feature:320598-324784:1:exon
subclass of: SO_0000010

121097995
type: Gene
SIO_000068: ncbigene

position:320598:1
position: 320598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324784:1
position: 324784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320598-324784:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615495.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320598..320671,321044..321238,321558..321757,321950..322032,322559..322746,323678..324063,324182..324784)
location: region:320598-324784:1
so has part: feature:320598-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323678-324063:1:exon
so has part: feature:324182-324784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320598-320671:1:exon

position:320671:1
position: 320671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

position:321044:1
position: 321044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321238:1
position: 321238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

position:321558:1
position: 321558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321757:1
position: 321757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

position:321950:1
position: 321950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322032:1
position: 322032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

position:322559:1
position: 322559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322746:1
position: 322746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323678-324063:1:exon

position:323678:1
position: 323678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324063:1
position: 324063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324182-324784:1:exon

position:324182:1
position: 324182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615493.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320601..320671,321044..321238,321558..321757,321950..322032,322559..322746,323215..323328,323678..324063,324182..324784)
location: region:320601-324784:1
so has part: feature:320601-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323215-323328:1:exon
so has part: feature:323678-324063:1:exon
so has part: feature:324182-324784:1:exon

position:320601:1
position: 320601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320601-320671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323215-323328:1:exon

position:323215:1
position: 323215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323328:1
position: 323328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:323678-324063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324182-324784:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615494.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320603..320671,321044..321238,321558..321757,321950..322032,322559..322746,323215..323328,323678..323831,323904..324063,324182..324784)
location: region:320603-324784:1
so has part: feature:320603-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323215-323328:1:exon
so has part: feature:323678-323831:1:exon
so has part: feature:323904-324063:1:exon
so has part: feature:324182-324784:1:exon

position:320603:1
position: 320603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320603-320671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323215-323328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323678-323831:1:exon

position:323831:1
position: 323831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323904-324063:1:exon

position:323904:1
position: 323904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:324182-324784:1:exon

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
translation: MAAPLRGRLRALALGGCGLLLGSALAAGDEGLYAAVMPALRALPPEAAHGLALRAAALGLLPTDRPDGPALEVRVLGQRFRNPVGLAAGFDKQGEAVDGLYKIGFGFVEVGTVTPQPQEGNPRPRVFRLAEDEAIINRYGFNSHGHAAVERRLRARQETQLRLTGAGMPLGVNLGKNKSSTDATADYVAGVRMLGPLADYLVVNVSSPNTPGLRDLQGKTELRDLLTKVLAERDMLPCEHKPAVLVKIAPDLTTQDKQDIASVVCELGVDGLIVSNTTVSRPSTLRSRQRTEPGGLSGRPLRELSTQTIREMYSLTQGRGKAGLGAYAGVTHAVLTLCLPTGQVPIIGVGGVSSGHDALEKIRAGASLVQMYTALVYHGPLVVGMVKRELEELLRKQGFKNVMEAVGADHRW
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320654..320671,321044..321238,321558..321757,321950..322032,322559..322746,323215..323328,323678..324063,324182..324236)
location: region:320654-324236:1
so has part: feature:320654-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323215-323328:1:exon
so has part: feature:323678-324063:1:exon
so has part: feature:324182-324236:1:exon

XP_040471427.1
type: Protein
SIO_000068: ncbiprotein

position:320654:1
position: 320654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324236:1
position: 324236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320654-320671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323215-323328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323678-324063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324182-324236:1:exon

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X2
translation: MAAPLRGRLRALALGGCGLLLGSALAAGDEGLYAAVMPALRALPPEAAHGLALRAAALGLLPTDRPDGPALEVRVLGQRFRNPVGLAAGFDKQGEAVDGLYKIGFGFVEVGTVTPQPQEGNPRPRVFRLAEDEAIINRYGFNSHGHAAVERRLRARQETQLRLTGAGMPLGVNLGKNKSSTDATADYVAGVRMLGPLADYLVVNVSSPNTPGLRDLQGKTELRDLLTKVLAERDMLPCEHKPAVLVKIAPDLTTQDKQDIASVVCELGVDGLIVSNTTVSRPSTLRSRQRTEPGGLSGRPLRELSTQTIREMYSLTQGQVPIIGVGGVSSGHDALEKIRAGASLVQMYTALVYHGPLVVGMVKRELEELLRKQGFKNVMEAVGADHRW
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320654..320671,321044..321238,321558..321757,321950..322032,322559..322746,323215..323328,323678..323831,323904..324063,324182..324236)
location: region:320654-324236:1
so has part: feature:320654-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323215-323328:1:exon
so has part: feature:323678-323831:1:exon
so has part: feature:323904-324063:1:exon
so has part: feature:324182-324236:1:exon

XP_040471428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320654-320671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323215-323328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323678-323831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323904-324063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:324182-324236:1:exon

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X3
translation: MAAPLRGRLRALALGGCGLLLGSALAAGDEGLYAAVMPALRALPPEAAHGLALRAAALGLLPTDRPDGPALEVRVLGQRFRNPVGLAAGFDKQGEAVDGLYKIGFGFVEVGTVTPQPQEGNPRPRVFRLAEDEAIINRYGFNSHGHAAVERRLRARQETQLRLTGAGMPLGVNLGKNKSSTDATADYVAGVRMLGPLADYLVVNVSSPNTPGLRDLQGKTELRDLLTKLGVDGLIVSNTTVSRPSTLRSRQRTEPGGLSGRPLRELSTQTIREMYSLTQGRGKAGLGAYAGVTHAVLTLCLPTGQVPIIGVGGVSSGHDALEKIRAGASLVQMYTALVYHGPLVVGMVKRELEELLRKQGFKNVMEAVGADHRW
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(320654..320671,321044..321238,321558..321757,321950..322032,322559..322746,323678..324063,324182..324236)
location: region:320654-324236:1
so has part: feature:320654-320671:1:exon
so has part: feature:321044-321238:1:exon
so has part: feature:321558-321757:1:exon
so has part: feature:321950-322032:1:exon
so has part: feature:322559-322746:1:exon
so has part: feature:323678-324063:1:exon
so has part: feature:324182-324236:1:exon

XP_040471429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320654-320671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321044-321238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321558-321757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321950-322032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322559-322746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323678-324063:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324182-324236:1:exon

LOC121097997
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 327176..329239
location: region:327176-329239:1
so has part: feature:327176-329239:1:exon
subclass of: SO_0000010

121097997
type: Gene
SIO_000068: ncbigene

position:327176:1
position: 327176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329239:1
position: 329239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327176-329239:1:exon

LOC121097997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097997
product: haptoglobin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_040615502.1
SIO_010081: LOC121097997
subclass of: SO_0000673
so part of: LOC121097997
location: join(327176..327301,327675..327736,327875..327976,328179..328253,328439..329239)
location: region:327176-329239:1
so has part: feature:327176-327301:1:exon
so has part: feature:327675-327736:1:exon
so has part: feature:327875-327976:1:exon
so has part: feature:328179-328253:1:exon
so has part: feature:328439-329239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327176-327301:1:exon

position:327301:1
position: 327301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327675-327736:1:exon

position:327675:1
position: 327675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327736:1
position: 327736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327875-327976:1:exon

position:327875:1
position: 327875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327976:1
position: 327976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328179-328253:1:exon

position:328179:1
position: 328179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328253:1
position: 328253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328439-329239:1:exon

position:328439:1
position: 328439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121097997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haptoglobin-like isoform X2
translation: MNMGPAVLLITGLAWTMLETAAATEWSCAKPADIEHGYVEHLIKYRCDPYYQLRGSGDGMYKCDEDHAWVSPEAGKEVPVCEPVCGKPKNPPKQMQRIIGGLLAGKGSFPWQGQLVTRHNLTVGATLISDQWLLTTGRNVYLNHSENTKPEEIAPTLQLFLGSQKQPTSGIEHVVLHPGYPEAVDLALLKLKQKVVFGEEVMPICLPQKNYVHPGRVGYVSGWGRGATFAFPDMLKYVMLPVADSEMCRQYYGARNESYWVQPILSNDTFCVGMSELREDTCYGDAGGAFAVQDPDDDTWYAAGILSYDKTCTASKYGVYVDLQRVLAWIKETVAAG
SIO_010081: LOC121097997
subclass of: SO_0000673
so part of: LOC121097997
location: join(327291..327301,327675..327736,327875..327976,328179..328253,328439..329202)
location: region:327291-329202:1
so has part: feature:327291-327301:1:exon
so has part: feature:327675-327736:1:exon
so has part: feature:327875-327976:1:exon
so has part: feature:328179-328253:1:exon
so has part: feature:328439-329202:1:exon

XP_040471436.1
type: Protein
SIO_000068: ncbiprotein

position:327291:1
position: 327291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329202:1
position: 329202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327291-327301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327675-327736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327875-327976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328179-328253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328439-329202:1:exon

LOC121097997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097997
product: haptoglobin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040615501.1
SIO_010081: LOC121097997
subclass of: SO_0000673
so part of: LOC121097997
location: join(327311..327487,327675..327736,327875..327976,328179..328253,328439..329239)
location: region:327311-329239:1
so has part: feature:327311-327487:1:exon
so has part: feature:327675-327736:1:exon
so has part: feature:327875-327976:1:exon
so has part: feature:328179-328253:1:exon
so has part: feature:328439-329239:1:exon

position:327311:1
position: 327311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327311-327487:1:exon

position:327487:1
position: 327487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327675-327736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327875-327976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328179-328253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328439-329239:1:exon

LOC121097997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haptoglobin-like isoform X1
translation: MPCCGLWQDPRRAWERSGSQHCSLVLHSSRVQVWPRPAVLLITGLAWTMLETAAATEWSCAKPADIEHGYVEHLIKYRCDPYYQLRGSGDGMYKCDEDHAWVSPEAGKEVPVCEPVCGKPKNPPKQMQRIIGGLLAGKGSFPWQGQLVTRHNLTVGATLISDQWLLTTGRNVYLNHSENTKPEEIAPTLQLFLGSQKQPTSGIEHVVLHPGYPEAVDLALLKLKQKVVFGEEVMPICLPQKNYVHPGRVGYVSGWGRGATFAFPDMLKYVMLPVADSEMCRQYYGARNESYWVQPILSNDTFCVGMSELREDTCYGDAGGAFAVQDPDDDTWYAAGILSYDKTCTASKYGVYVDLQRVLAWIKETVAAG
SIO_010081: LOC121097997
subclass of: SO_0000673
so part of: LOC121097997
location: join(327381..327487,327675..327736,327875..327976,328179..328253,328439..329202)
location: region:327381-329202:1
so has part: feature:327381-327487:1:exon
so has part: feature:327675-327736:1:exon
so has part: feature:327875-327976:1:exon
so has part: feature:328179-328253:1:exon
so has part: feature:328439-329202:1:exon

XP_040471435.1
type: Protein
SIO_000068: ncbiprotein

position:327381:1
position: 327381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327381-327487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327675-327736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327875-327976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328179-328253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328439-329202:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329962..340287
location: region:329962-340287:1
so has part: feature:329962-340287:1:exon
subclass of: SO_0000010

121097962
type: Gene
SIO_000068: ncbigene

position:329962:1
position: 329962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340287:1
position: 340287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329962-340287:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DHX38
product: DEAH-box helicase 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040615438.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(329962..330543,331099..331286,331444..331548,331954..332119,332234..332352,332470..332546,332761..332916,333558..333719,333805..333912,334765..334877,334981..335118,335379..335565,335648..335833,336263..336403,336607..336717,336794..336910,337158..337265,337381..337493,338022..338230,338309..338463,338541..338696,338772..338906,338986..339111,339501..339596,339760..339881,340023..340287)
location: region:329962-340287:1
so has part: feature:329962-330543:1:exon
so has part: feature:331099-331286:1:exon
so has part: feature:331444-331548:1:exon
so has part: feature:331954-332119:1:exon
so has part: feature:332234-332352:1:exon
so has part: feature:332470-332546:1:exon
so has part: feature:332761-332916:1:exon
so has part: feature:333558-333719:1:exon
so has part: feature:333805-333912:1:exon
so has part: feature:334765-334877:1:exon
so has part: feature:334981-335118:1:exon
so has part: feature:335379-335565:1:exon
so has part: feature:335648-335833:1:exon
so has part: feature:336263-336403:1:exon
so has part: feature:336607-336717:1:exon
so has part: feature:336794-336910:1:exon
so has part: feature:337158-337265:1:exon
so has part: feature:337381-337493:1:exon
so has part: feature:338022-338230:1:exon
so has part: feature:338309-338463:1:exon
so has part: feature:338541-338696:1:exon
so has part: feature:338772-338906:1:exon
so has part: feature:338986-339111:1:exon
so has part: feature:339501-339596:1:exon
so has part: feature:339760-339881:1:exon
so has part: feature:340023-340287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329962-330543:1:exon

position:330543:1
position: 330543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331099-331286:1:exon

position:331099:1
position: 331099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331286:1
position: 331286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331444-331548:1:exon

position:331444:1
position: 331444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331548:1
position: 331548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331954-332119:1:exon

position:331954:1
position: 331954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332119:1
position: 332119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332234-332352:1:exon

position:332234:1
position: 332234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332352:1
position: 332352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332470-332546:1:exon

position:332470:1
position: 332470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332546:1
position: 332546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:332761-332916:1:exon

position:332761:1
position: 332761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332916:1
position: 332916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333558-333719:1:exon

position:333558:1
position: 333558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333719:1
position: 333719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:333805-333912:1:exon

position:333805:1
position: 333805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333912:1
position: 333912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:334765-334877:1:exon

position:334765:1
position: 334765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334877:1
position: 334877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:334981-335118:1:exon

position:334981:1
position: 334981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335118:1
position: 335118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335379-335565:1:exon

position:335379:1
position: 335379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335565:1
position: 335565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:335648-335833:1:exon

position:335648:1
position: 335648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335833:1
position: 335833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:336263-336403:1:exon

position:336263:1
position: 336263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336403:1
position: 336403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:336607-336717:1:exon

position:336607:1
position: 336607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336717:1
position: 336717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:336794-336910:1:exon

position:336794:1
position: 336794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336910:1
position: 336910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:337158-337265:1:exon

position:337158:1
position: 337158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337265:1
position: 337265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:337381-337493:1:exon

position:337381:1
position: 337381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337493:1
position: 337493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:338022-338230:1:exon

position:338022:1
position: 338022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338230:1
position: 338230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338463:1:exon

position:338309:1
position: 338309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338463:1
position: 338463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:338541-338696:1:exon

position:338541:1
position: 338541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338696:1
position: 338696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:338772-338906:1:exon

position:338772:1
position: 338772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338906:1
position: 338906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:338986-339111:1:exon

position:338986:1
position: 338986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339111:1
position: 339111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:339501-339596:1:exon

position:339501:1
position: 339501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339596:1
position: 339596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:339760-339881:1:exon

position:339760:1
position: 339760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339881:1
position: 339881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:340023-340287:1:exon

position:340023:1
position: 340023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: DHX38
product: DEAH-box helicase 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040615437.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(330014..330543,331099..331286,331444..331548,331954..332119,332234..332352,332470..332546,332761..332916,333558..333719,333805..333912,334765..334877,334981..335118,335379..335565,335648..335833,336263..336403,336607..336717,336794..336910,337158..337265,337381..337493,338022..338230,338309..338463,338541..338696,338772..338906,338986..339111,339501..339596,339760..339881,340020..340287)
location: region:330014-340287:1
so has part: feature:330014-330543:1:exon
so has part: feature:331099-331286:1:exon
so has part: feature:331444-331548:1:exon
so has part: feature:331954-332119:1:exon
so has part: feature:332234-332352:1:exon
so has part: feature:332470-332546:1:exon
so has part: feature:332761-332916:1:exon
so has part: feature:333558-333719:1:exon
so has part: feature:333805-333912:1:exon
so has part: feature:334765-334877:1:exon
so has part: feature:334981-335118:1:exon
so has part: feature:335379-335565:1:exon
so has part: feature:335648-335833:1:exon
so has part: feature:336263-336403:1:exon
so has part: feature:336607-336717:1:exon
so has part: feature:336794-336910:1:exon
so has part: feature:337158-337265:1:exon
so has part: feature:337381-337493:1:exon
so has part: feature:338022-338230:1:exon
so has part: feature:338309-338463:1:exon
so has part: feature:338541-338696:1:exon
so has part: feature:338772-338906:1:exon
so has part: feature:338986-339111:1:exon
so has part: feature:339501-339596:1:exon
so has part: feature:339760-339881:1:exon
so has part: feature:340020-340287:1:exon

position:330014:1
position: 330014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330014-330543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331099-331286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331444-331548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331954-332119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332234-332352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332470-332546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332761-332916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333558-333719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333805-333912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:334765-334877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334981-335118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335379-335565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335648-335833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336263-336403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336607-336717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336794-336910:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:337158-337265:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337381-337493:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:338022-338230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338541-338696:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338772-338906:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338986-339111:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339501-339596:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339760-339881:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:340020-340287:1:exon

position:340020:1
position: 340020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
translation: MAEASEESLHRLAGTNPEAEAGGLVLRRRSAATEQHVFKAPAPRASLLGLDVLAAQKRREREEEAAGGKRSRVSSYRDWEEGRDEAGSAEEDDDEETDRSSRSTRKDRHYRSVHVETPSYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKREREEWDRSRHSSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSARRSQWESPSPTPSCRDSERSHRASSMRDTDRRDRDRSVRSRYLDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRRADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSTEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYRTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSSSRSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(330221..330543,331099..331286,331444..331548,331954..332119,332234..332352,332470..332546,332761..332916,333558..333719,333805..333912,334765..334877,334981..335118,335379..335565,335648..335833,336263..336403,336607..336717,336794..336910,337158..337265,337381..337493,338022..338230,338309..338463,338541..338696,338772..338906,338986..339111,339501..339596,339760..339881,340020..340107)
location: region:330221-340107:1
so has part: feature:330221-330543:1:exon
so has part: feature:331099-331286:1:exon
so has part: feature:331444-331548:1:exon
so has part: feature:331954-332119:1:exon
so has part: feature:332234-332352:1:exon
so has part: feature:332470-332546:1:exon
so has part: feature:332761-332916:1:exon
so has part: feature:333558-333719:1:exon
so has part: feature:333805-333912:1:exon
so has part: feature:334765-334877:1:exon
so has part: feature:334981-335118:1:exon
so has part: feature:335379-335565:1:exon
so has part: feature:335648-335833:1:exon
so has part: feature:336263-336403:1:exon
so has part: feature:336607-336717:1:exon
so has part: feature:336794-336910:1:exon
so has part: feature:337158-337265:1:exon
so has part: feature:337381-337493:1:exon
so has part: feature:338022-338230:1:exon
so has part: feature:338309-338463:1:exon
so has part: feature:338541-338696:1:exon
so has part: feature:338772-338906:1:exon
so has part: feature:338986-339111:1:exon
so has part: feature:339501-339596:1:exon
so has part: feature:339760-339881:1:exon
so has part: feature:340020-340107:1:exon

XP_040471371.1
type: Protein
SIO_000068: ncbiprotein

position:330221:1
position: 330221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340107:1
position: 340107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330221-330543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331099-331286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331444-331548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331954-332119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332234-332352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332470-332546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332761-332916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333558-333719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333805-333912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:334765-334877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334981-335118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335379-335565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335648-335833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336263-336403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336607-336717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336794-336910:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:337158-337265:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337381-337493:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:338022-338230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338541-338696:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338772-338906:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338986-339111:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339501-339596:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339760-339881:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:340020-340107:1:exon

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2
translation: MAEASEESLHRLAGTNPEAEAGGLVLRRRSAATEQHVFKAPAPRASLLGLDVLAAQKRREREEEAAGGKRSRVSSYRDWEEGRDEAGSAEEDDDEETDRSSRSTRKDRHYRSVHVETPSYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKREREEWDRSRHSSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSARRSQWESPSPTPSCRDSERSHRASSMRDTDRRDRDRSVRSRYLDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRRADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSTEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYRTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSSRSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(330221..330543,331099..331286,331444..331548,331954..332119,332234..332352,332470..332546,332761..332916,333558..333719,333805..333912,334765..334877,334981..335118,335379..335565,335648..335833,336263..336403,336607..336717,336794..336910,337158..337265,337381..337493,338022..338230,338309..338463,338541..338696,338772..338906,338986..339111,339501..339596,339760..339881,340023..340107)
location: region:330221-340107:1
so has part: feature:330221-330543:1:exon
so has part: feature:331099-331286:1:exon
so has part: feature:331444-331548:1:exon
so has part: feature:331954-332119:1:exon
so has part: feature:332234-332352:1:exon
so has part: feature:332470-332546:1:exon
so has part: feature:332761-332916:1:exon
so has part: feature:333558-333719:1:exon
so has part: feature:333805-333912:1:exon
so has part: feature:334765-334877:1:exon
so has part: feature:334981-335118:1:exon
so has part: feature:335379-335565:1:exon
so has part: feature:335648-335833:1:exon
so has part: feature:336263-336403:1:exon
so has part: feature:336607-336717:1:exon
so has part: feature:336794-336910:1:exon
so has part: feature:337158-337265:1:exon
so has part: feature:337381-337493:1:exon
so has part: feature:338022-338230:1:exon
so has part: feature:338309-338463:1:exon
so has part: feature:338541-338696:1:exon
so has part: feature:338772-338906:1:exon
so has part: feature:338986-339111:1:exon
so has part: feature:339501-339596:1:exon
so has part: feature:339760-339881:1:exon
so has part: feature:340023-340107:1:exon

XP_040471372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330221-330543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331099-331286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331444-331548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331954-332119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332234-332352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332470-332546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332761-332916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333558-333719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333805-333912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:334765-334877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334981-335118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335379-335565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335648-335833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336263-336403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336607-336717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336794-336910:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:337158-337265:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337381-337493:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:338022-338230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338541-338696:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338772-338906:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338986-339111:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339501-339596:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339760-339881:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:340023-340107:1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(495909..609460)
location: region:495909-609460:-1
so has part: feature:495909-609460:-1:exon
subclass of: SO_0000010

121097796
type: Gene
SIO_000068: ncbigene

position:495909:-1
position: 495909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609460:-1
position: 609460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495909-609460:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: ZFHX3
product: zinc finger homeobox 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 21 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_040615112.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(495909..500237,505009..510444,511683..511785,520870..521070,521278..521411,533367..533477,573005..573236,602459..602955,606703..609460))
location: region:495909-609460:-1
so has part: feature:606703-609460:-1:exon
so has part: feature:602459-602955:-1:exon
so has part: feature:573005-573236:-1:exon
so has part: feature:533367-533477:-1:exon
so has part: feature:521278-521411:-1:exon
so has part: feature:520870-521070:-1:exon
so has part: feature:511683-511785:-1:exon
so has part: feature:505009-510444:-1:exon
so has part: feature:495909-500237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606703-609460:-1:exon

position:606703:-1
position: 606703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602459-602955:-1:exon

position:602459:-1
position: 602459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602955:-1
position: 602955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573005-573236:-1:exon

position:573005:-1
position: 573005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573236:-1
position: 573236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533367-533477:-1:exon

position:533367:-1
position: 533367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533477:-1
position: 533477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:521278-521411:-1:exon

position:521278:-1
position: 521278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521411:-1
position: 521411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:520870-521070:-1:exon

position:520870:-1
position: 520870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521070:-1
position: 521070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:511683-511785:-1:exon

position:511683:-1
position: 511683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511785:-1
position: 511785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:505009-510444:-1:exon

position:505009:-1
position: 505009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510444:-1
position: 510444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495909-500237:-1:exon

position:500237:-1
position: 500237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: ZFHX3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGPEPTGKEVSCGQCAASFAGLQSYMEHRCTGTRPPLPLRGESGSESSEDGEEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACSSGSGALPSLLPNSLPKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSAANLIGPGHSFYGKFSGICMEGEQALQVGAASGAEPPPTGVLAPSALLNLGGLTSSALKTPITSVPLGPLASSPTKPSEGKDPGVAEGEKQEGGNQDSLSEKAEPVEEVEEDEEEDVEEEEEEEEEEEEEDDDEDDEGCKGLFPSELEDELEDRPQEDAGAVAGGGSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGASVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMAPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAAEAEESIEDVEGPTNETAGDAEEPAKEQEGGGDKDQSKWTAPTSQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAAAPEKDGNSAAEELGKQPEISEDSGKSLLPSESTEHSGDPKPVPADQSSAREDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLSEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSSSSNGAGNSNSSSLSLGSSTPSPVSTSNSNTFTTTNTSNSGTAPIPSLLNQVSSDTGGIPPLGNPVSTNIASPSEPKEVNRKKLADMIASRQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHSVLIQQSQHSEKKNKSVVKEKEKETSRERESAERGDNNGASKETLPDNLKPKEKKDFVPGSSTEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDTCGKFFSNILILKSHQ…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(498675..500237,505009..510444,511683..511785,520870..521070,521278..521411,533367..533477,573005..573236,602459..602955,606703..609409))
location: region:498675-609409:-1
so has part: feature:606703-609409:-1:exon
so has part: feature:602459-602955:-1:exon
so has part: feature:573005-573236:-1:exon
so has part: feature:533367-533477:-1:exon
so has part: feature:521278-521411:-1:exon
so has part: feature:520870-521070:-1:exon
so has part: feature:511683-511785:-1:exon
so has part: feature:505009-510444:-1:exon
so has part: feature:498675-500237:-1:exon

XP_040471046.1
type: Protein
SIO_000068: ncbiprotein

position:498675:-1
position: 498675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609409:-1
position: 609409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606703-609409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602459-602955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573005-573236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533367-533477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521278-521411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520870-521070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:511683-511785:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505009-510444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498675-500237:-1:exon

LOC121098108
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(617154..636624)
location: region:617154-636624:-1
so has part: feature:617154-636624:-1:exon
subclass of: SO_0000011

121098108
type: Gene
SIO_000068: ncbigene

position:617154:-1
position: 617154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636624:-1
position: 636624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617154-636624:-1:exon

LOC121098108
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098108
product: uncharacterized LOC121098108
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005831170.1
SIO_010081: LOC121098108
subclass of: SO_0000673
so part of: LOC121098108
location: complement(join(617154..617252,629477..629479,636589..636624))
location: region:617154-636624:-1
so has part: feature:636589-636624:-1:exon
so has part: feature:629477-629479:-1:exon
so has part: feature:617154-617252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636589-636624:-1:exon

position:636589:-1
position: 636589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629477-629479:-1:exon

position:629477:-1
position: 629477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629479:-1
position: 629479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617154-617252:-1:exon

position:617252:-1
position: 617252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098043
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661576..670230)
location: region:661576-670230:-1
so has part: feature:661576-670230:-1:exon
subclass of: SO_0000011

121098043
type: Gene
SIO_000068: ncbigene

position:661576:-1
position: 661576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670230:-1
position: 670230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661576-670230:-1:exon

LOC121098043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098043
product: uncharacterized LOC121098043
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005831152.1
SIO_010081: LOC121098043
subclass of: SO_0000673
so part of: LOC121098043
location: complement(join(661576..663342,664837..664946,669462..670230))
location: region:661576-670230:-1
so has part: feature:669462-670230:-1:exon
so has part: feature:664837-664946:-1:exon
so has part: feature:661576-663342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669462-670230:-1:exon

position:669462:-1
position: 669462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664837-664946:-1:exon

position:664837:-1
position: 664837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664946:-1
position: 664946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661576-663342:-1:exon

position:663342:-1
position: 663342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098044
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667989..668399
location: region:667989-668399:1
so has part: feature:667989-668399:1:exon
subclass of: SO_0000011

121098044
type: Gene
SIO_000068: ncbigene

position:667989:1
position: 667989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668399:1
position: 668399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667989-668399:1:exon

LOC121098044
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098044
product: uncharacterized LOC121098044
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005831153.1
SIO_010081: LOC121098044
subclass of: SO_0000673
so part of: LOC121098044
location: join(667989..668051,668165..668399)
location: region:667989-668399:1
so has part: feature:667989-668051:1:exon
so has part: feature:668165-668399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667989-668051:1:exon

position:668051:1
position: 668051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668165-668399:1:exon

position:668165:1
position: 668165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121098126
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1088325..1101660)
location: region:1088325-1101660:-1
so has part: feature:1088325-1101660:-1:exon
subclass of: SO_0000011

121098126
type: Gene
SIO_000068: ncbigene

position:1088325:-1
position: 1088325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101660:-1
position: 1101660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088325-1101660:-1:exon

LOC121098126
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098126
product: uncharacterized LOC121098126
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005831178.1
SIO_010081: LOC121098126
subclass of: SO_0000673
so part of: LOC121098126
location: complement(join(1088325..1092788,1093402..1093576,1094145..1094312,1094924..1095486,1097405..1097538,1100984..1101660))
location: region:1088325-1101660:-1
so has part: feature:1100984-1101660:-1:exon
so has part: feature:1097405-1097538:-1:exon
so has part: feature:1094924-1095486:-1:exon
so has part: feature:1094145-1094312:-1:exon
so has part: feature:1093402-1093576:-1:exon
so has part: feature:1088325-1092788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1100984-1101660:-1:exon

position:1100984:-1
position: 1100984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1097405-1097538:-1:exon

position:1097405:-1
position: 1097405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097538:-1
position: 1097538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1094924-1095486:-1:exon

position:1094924:-1
position: 1094924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095486:-1
position: 1095486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1094145-1094312:-1:exon

position:1094145:-1
position: 1094145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094312:-1
position: 1094312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1093402-1093576:-1:exon

position:1093402:-1
position: 1093402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093576:-1
position: 1093576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1088325-1092788:-1:exon

position:1092788:-1
position: 1092788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1173929..1180478
location: region:1173929-1180478:1
so has part: feature:1173929-1180478:1:exon
subclass of: SO_0000010

121098125
type: Gene
SIO_000068: ncbigene

position:1173929:1
position: 1173929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180478:1
position: 1180478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173929-1180478:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 50 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615805.1
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1173929..1174075,1174936..1175027,1176346..1176438,1177315..1177412,1177733..1177813,1179194..1179285,1179994..1180478)
location: region:1173929-1180478:1
so has part: feature:1173929-1174075:1:exon
so has part: feature:1174936-1175027:1:exon
so has part: feature:1176346-1176438:1:exon
so has part: feature:1177315-1177412:1:exon
so has part: feature:1177733-1177813:1:exon
so has part: feature:1179194-1179285:1:exon
so has part: feature:1179994-1180478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173929-1174075:1:exon

position:1174075:1
position: 1174075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174936-1175027:1:exon

position:1174936:1
position: 1174936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175027:1
position: 1175027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1176346-1176438:1:exon

position:1176346:1
position: 1176346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176438:1
position: 1176438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1177315-1177412:1:exon

position:1177315:1
position: 1177315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177412:1
position: 1177412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177733-1177813:1:exon

position:1177733:1
position: 1177733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177813:1
position: 1177813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1179194-1179285:1:exon

position:1179194:1
position: 1179194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179285:1
position: 1179285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1179994-1180478:1:exon

position:1179994:1
position: 1179994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MPELAVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVAMGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDIKKEEKKEKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1174002..1174075,1174936..1175027,1176346..1176438,1177315..1177412,1177733..1177813,1179194..1179285,1179994..1180432)
location: region:1174002-1180432:1
so has part: feature:1174002-1174075:1:exon
so has part: feature:1174936-1175027:1:exon
so has part: feature:1176346-1176438:1:exon
so has part: feature:1177315-1177412:1:exon
so has part: feature:1177733-1177813:1:exon
so has part: feature:1179194-1179285:1:exon
so has part: feature:1179994-1180432:1:exon

XP_040471739.1
type: Protein
SIO_000068: ncbiprotein

position:1174002:1
position: 1174002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180432:1
position: 1180432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174002-1174075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174936-1175027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176346-1176438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177315-1177412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177733-1177813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179194-1179285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179994-1180432:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1182204..1225762)
location: region:1182204-1225762:-1
so has part: feature:1182204-1225762:-1:exon
subclass of: SO_0000010

121098124
type: Gene
SIO_000068: ncbigene

position:1182204:-1
position: 1182204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225762:-1
position: 1225762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182204-1225762:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040615803.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1182204..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213863..1214000,1221150..1221268,1221579..1221726,1222450..1222533,1225709..1225762))
location: region:1182204-1225762:-1
so has part: feature:1225709-1225762:-1:exon
so has part: feature:1222450-1222533:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213863-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
so has part: feature:1192755-1192809:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1182204-1183381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225762:-1:exon

position:1225709:-1
position: 1225709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222450-1222533:-1:exon

position:1222450:-1
position: 1222450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222533:-1
position: 1222533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1221579-1221726:-1:exon

position:1221579:-1
position: 1221579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221726:-1
position: 1221726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1221150-1221268:-1:exon

position:1221150:-1
position: 1221150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221268:-1
position: 1221268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1213863-1214000:-1:exon

position:1213863:-1
position: 1213863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214000:-1
position: 1214000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1212956-1213052:-1:exon

position:1212956:-1
position: 1212956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213052:-1
position: 1213052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207782-1207921:-1:exon

position:1207782:-1
position: 1207782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207921:-1
position: 1207921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1204748-1204964:-1:exon

position:1204748:-1
position: 1204748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204964:-1
position: 1204964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1198269-1198358:-1:exon

position:1198269:-1
position: 1198269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198358:-1
position: 1198358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1196333-1196507:-1:exon

position:1196333:-1
position: 1196333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196507:-1
position: 1196507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1192755-1192809:-1:exon

position:1192755:-1
position: 1192755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192809:-1
position: 1192809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1190707-1190788:-1:exon

position:1190707:-1
position: 1190707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190788:-1
position: 1190788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1189965-1190093:-1:exon

position:1189965:-1
position: 1189965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190093:-1
position: 1190093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1189604-1189682:-1:exon

position:1189604:-1
position: 1189604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189682:-1
position: 1189682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1189389-1189460:-1:exon

position:1189389:-1
position: 1189389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189460:-1
position: 1189460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1189212-1189300:-1:exon

position:1189212:-1
position: 1189212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189300:-1
position: 1189300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1187861-1188020:-1:exon

position:1187861:-1
position: 1187861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188020:-1
position: 1188020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1186693-1186826:-1:exon

position:1186693:-1
position: 1186693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186826:-1
position: 1186826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1186425-1186565:-1:exon

position:1186425:-1
position: 1186425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186565:-1
position: 1186565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1185716-1185836:-1:exon

position:1185716:-1
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reference: sequence
type: ReverseStrandPosition
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position:1185836:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:1185263-1185367:-1:exon

position:1185263:-1
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reference: sequence
type: ReverseStrandPosition
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position:1185367:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:1184581-1184677:-1:exon

position:1184581:-1
position: 1184581
reference: sequence
type: ReverseStrandPosition
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position:1184677:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1183626-1183698:-1:exon

position:1183626:-1
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reference: sequence
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position:1183698:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:1182204-1183381:-1:exon

position:1183381:-1
position: 1183381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_040615798.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1182204..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1222450..1222533,1225709..1225762))
location: region:1182204-1225762:-1
so has part: feature:1225709-1225762:-1:exon
so has part: feature:1222450-1222533:-1:exon
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so has part: feature:1213716-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
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so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
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so has part: feature:1182204-1183381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222450-1222533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1213716-1214000:-1:exon

position:1213716:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1182204-1183381:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040615802.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1182204..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1225709..1225760))
location: region:1182204-1225760:-1
so has part: feature:1225709-1225760:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213716-1214000:-1:exon
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so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1182204-1183381:-1:exon

position:1225760:-1
position: 1225760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186425-1186565:-1:exon

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SIO_000300: 19
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1182204-1183381:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040615799.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1182204..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1222450..1222533,1222877..1223128,1223276..1224787))
location: region:1182204-1224787:-1
so has part: feature:1223276-1224787:-1:exon
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so has part: feature:1189604-1189682:-1:exon
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so has part: feature:1183626-1183698:-1:exon
so has part: feature:1182204-1183381:-1:exon

position:1224787:-1
position: 1224787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223276-1224787:-1:exon

position:1223276:-1
position: 1223276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222877-1223128:-1:exon

position:1222877:-1
position: 1222877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223128:-1
position: 1223128
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:1222450-1222533:-1:exon

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SIO_000300: 4
SIO_000628: feature:1221579-1221726:-1:exon

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SIO_000300: 5
SIO_000628: feature:1221150-1221268:-1:exon

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SIO_000628: feature:1213716-1214000:-1:exon

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SIO_000300: 7
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1190707-1190788:-1:exon

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SIO_000300: 15
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urn:…
SIO_000300: 20
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1182204-1183381:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615804.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1182204..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1190995..1191587))
location: region:1182204-1191587:-1
so has part: feature:1190995-1191587:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
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so has part: feature:1187861-1188020:-1:exon
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so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1182204-1183381:-1:exon

position:1191587:-1
position: 1191587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190995-1191587:-1:exon

position:1190995:-1
position: 1190995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189965-1190093:-1:exon

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SIO_000300: 4
SIO_000628: feature:1189604-1189682:-1:exon

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SIO_000300: 6
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 7
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urn:…
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SIO_000628: feature:1186693-1186826:-1:exon

urn:…
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SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1182204-1183381:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X3
translation: MTAGAGAGSGSGAGAVVSVKPKAHSRPSRMNCYVEVSGDGLPSETKKTGKQIGSSELLWNETLVLNVTAQSHLDLKVWSCHTLRNELLGTASISLSSLLKSGGKLENRQLTLDLQTENKGSVVSSGELTIFLDGPAVDLGSLPNGNAVTEGECHPSPHARGGSEHEAVSSSGERSRAESTAPATSEQASECQQPPPPPPGSQIPGRDPSSMAAATEGRHQPPSTNCFGSRPRMHRHAAGAARQNTGSGEQSPSARSRHRQQAKSTQHAGMANGTANGTVNGEAVGAADVEEERPAAGASVPAPVALSVADSSVAPALPALTSSGEAEEAATGSSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1183282..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1225709..1225754))
location: region:1183282-1225754:-1
so has part: feature:1225709-1225754:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213716-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
so has part: feature:1192755-1192809:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1183282-1183381:-1:exon

XP_040471736.1
type: Protein
SIO_000068: ncbiprotein

position:1183282:-1
position: 1183282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225754:-1
position: 1225754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213716-1214000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1183282-1183381:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X4
translation: MTAGAGAGSGSGAGAARGDAMAAASSSRARAGPPCEKSQLSVKVVSVKPKAHSRPSRMNCYVEVSGDGLPSETKKTGKQIGSSELLWNETLVLNVTAQSHLDLKVWSCHTLRNELLGTASISLSSLLKSGGKLENRQLTLDLQTENKGSVVSSGELTIFLDGPAVDLGSLPNGNAVTEGSQIPGRDPSSMAAATEGRHQPPSTNCFGSRPRMHRHAAGAARQNTGSGEQSPSARSRHRQQAKSTQHAGMANGTANGTVNGEAVGAADVEEERPAAGASVPAPVALSVADSSVAPALPALTSSGEAEEAATGSSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1183282..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213863..1214000,1221150..1221268,1221579..1221726,1222450..1222533,1225709..1225754))
location: region:1183282-1225754:-1
so has part: feature:1225709-1225754:-1:exon
so has part: feature:1222450-1222533:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213863-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
so has part: feature:1192755-1192809:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1183282-1183381:-1:exon

XP_040471737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222450-1222533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1213863-1214000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1183282-1183381:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MTAGAGAGSGSGAGAARGDAMAAASSSRARAGPPCEKSQLSVKVVSVKPKAHSRPSRMNCYVEVSGDGLPSETKKTGKQIGSSELLWNETLVLNVTAQSHLDLKVWSCHTLRNELLGTASISLSSLLKSGGKLENRQLTLDLQTENKGSVVSSGELTIFLDGPAVDLGSLPNGNAVTEGECHPSPHARGGSEHEAVSSSGERSRAESTAPATSEQASECQQPPPPPPGSQIPGRDPSSMAAATEGRHQPPSTNCFGSRPRMHRHAAGAARQNTGSGEQSPSARSRHRQQAKSTQHAGMANGTANGTVNGEAVGAADVEEERPAAGASVPAPVALSVADSSVAPALPALTSSGEAEEAATGSSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1183282..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1222450..1222533,1225709..1225754))
location: region:1183282-1225754:-1
so has part: feature:1225709-1225754:-1:exon
so has part: feature:1222450-1222533:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213716-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
so has part: feature:1192755-1192809:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1183282-1183381:-1:exon

XP_040471732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225709-1225754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222450-1222533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1213716-1214000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1183282-1183381:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
translation: MAAASSSRARAGPPCEKSQLSVKVVSVKPKAHSRPSRMNCYVEVSGDGLPSETKKTGKQIGSSELLWNETLVLNVTAQSHLDLKVWSCHTLRNELLGTASISLSSLLKSGGKLENRQLTLDLQTENKGSVVSSGELTIFLDGPAVDLGSLPNGNAVTEGECHPSPHARGGSEHEAVSSSGERSRAESTAPATSEQASECQQPPPPPPGSQIPGRDPSSMAAATEGRHQPPSTNCFGSRPRMHRHAAGAARQNTGSGEQSPSARSRHRQQAKSTQHAGMANGTANGTVNGEAVGAADVEEERPAAGASVPAPVALSVADSSVAPALPALTSSGEAEEAATGSSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1183282..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1192755..1192809,1196333..1196507,1198269..1198358,1204748..1204964,1207782..1207921,1212956..1213052,1213716..1214000,1221150..1221268,1221579..1221726,1222450..1222519))
location: region:1183282-1222519:-1
so has part: feature:1222450-1222519:-1:exon
so has part: feature:1221579-1221726:-1:exon
so has part: feature:1221150-1221268:-1:exon
so has part: feature:1213716-1214000:-1:exon
so has part: feature:1212956-1213052:-1:exon
so has part: feature:1207782-1207921:-1:exon
so has part: feature:1204748-1204964:-1:exon
so has part: feature:1198269-1198358:-1:exon
so has part: feature:1196333-1196507:-1:exon
so has part: feature:1192755-1192809:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1183282-1183381:-1:exon

XP_040471733.1
type: Protein
SIO_000068: ncbiprotein

position:1222519:-1
position: 1222519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222450-1222519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221579-1221726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221150-1221268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213716-1214000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212956-1213052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207782-1207921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204748-1204964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1198269-1198358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1196333-1196507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1192755-1192809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1183282-1183381:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X5
translation: MLGARAVHWQQGHTGSSDAFEKAPAGLPGGMLRLWTLRVQGGCACRLPRKTRGRARPLCQPGSGLAGLVSAVGPPCTLALGALRMSVFPGEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1183282..1183381,1183626..1183698,1184581..1184677,1185263..1185367,1185716..1185836,1186425..1186565,1186693..1186826,1187861..1188020,1189212..1189300,1189389..1189460,1189604..1189682,1189965..1190093,1190707..1190788,1190995..1191265))
location: region:1183282-1191265:-1
so has part: feature:1190995-1191265:-1:exon
so has part: feature:1190707-1190788:-1:exon
so has part: feature:1189965-1190093:-1:exon
so has part: feature:1189604-1189682:-1:exon
so has part: feature:1189389-1189460:-1:exon
so has part: feature:1189212-1189300:-1:exon
so has part: feature:1187861-1188020:-1:exon
so has part: feature:1186693-1186826:-1:exon
so has part: feature:1186425-1186565:-1:exon
so has part: feature:1185716-1185836:-1:exon
so has part: feature:1185263-1185367:-1:exon
so has part: feature:1184581-1184677:-1:exon
so has part: feature:1183626-1183698:-1:exon
so has part: feature:1183282-1183381:-1:exon

XP_040471738.1
type: Protein
SIO_000068: ncbiprotein

position:1191265:-1
position: 1191265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190995-1191265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190707-1190788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189965-1190093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189604-1189682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189389-1189460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189212-1189300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187861-1188020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1186693-1186826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1186425-1186565:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1185716-1185836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185263-1185367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1184581-1184677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1183626-1183698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1183282-1183381:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1225808..1228618
location: region:1225808-1228618:1
so has part: feature:1225808-1228618:1:exon
subclass of: SO_0000010

121098127
type: Gene
SIO_000068: ncbigene

position:1225808:1
position: 1225808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228618:1
position: 1228618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225808-1228618:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040615806.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1225808..1225941,1226007..1226139,1226237..1226370,1226447..1226518,1226622..1226759,1226852..1227073,1227426..1227523,1227657..1227801,1228039..1228618)
location: region:1225808-1228618:1
so has part: feature:1225808-1225941:1:exon
so has part: feature:1226007-1226139:1:exon
so has part: feature:1226237-1226370:1:exon
so has part: feature:1226447-1226518:1:exon
so has part: feature:1226622-1226759:1:exon
so has part: feature:1226852-1227073:1:exon
so has part: feature:1227426-1227523:1:exon
so has part: feature:1227657-1227801:1:exon
so has part: feature:1228039-1228618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225808-1225941:1:exon

position:1225941:1
position: 1225941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226007-1226139:1:exon

position:1226007:1
position: 1226007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226139:1
position: 1226139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1226237-1226370:1:exon

position:1226237:1
position: 1226237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226370:1
position: 1226370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1226447-1226518:1:exon

position:1226447:1
position: 1226447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226518:1
position: 1226518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1226622-1226759:1:exon

position:1226622:1
position: 1226622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226759:1
position: 1226759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226852-1227073:1:exon

position:1226852:1
position: 1226852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227073:1
position: 1227073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1227426-1227523:1:exon

position:1227426:1
position: 1227426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227523:1
position: 1227523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1227657-1227801:1:exon

position:1227657:1
position: 1227657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227801:1
position: 1227801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1228039-1228618:1:exon

position:1228039:1
position: 1228039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040615807.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1225808..1225941,1226007..1226139,1226237..1226370,1226447..1226518,1226625..1226759,1226852..1227073,1227426..1227523,1227657..1227801,1228039..1228618)
location: region:1225808-1228618:1
so has part: feature:1225808-1225941:1:exon
so has part: feature:1226007-1226139:1:exon
so has part: feature:1226237-1226370:1:exon
so has part: feature:1226447-1226518:1:exon
so has part: feature:1226625-1226759:1:exon
so has part: feature:1226852-1227073:1:exon
so has part: feature:1227426-1227523:1:exon
so has part: feature:1227657-1227801:1:exon
so has part: feature:1228039-1228618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225808-1225941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226007-1226139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1226237-1226370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226447-1226518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226625-1226759:1:exon

position:1226625:1
position: 1226625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226852-1227073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1227426-1227523:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1227657-1227801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228039-1228618:1:exon

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X1
translation: MGRAAMARVAHVVADTGAFLSAAPLQDIAQHLYTVPEVLAEIRDRPTRRRLAALPCELRLRRPRPDLLRLVTEFSKKTGDYPSLSAADLQVLALTCQLQAETDGPGCLRWEPQDKVRLSSTPRHPEAPLHLAGFHLPAKQKRLGKGQRRPSPERSVVPPECDEFSSFLYWRAPLPSIEEELQELLNAQAISVSPEPTEEHQSSDNGASADEEEDNEEESDDEGWITPSNLRQVQQDTGHCDTAPVGIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRQARSYILRCHGCFKTTSDMTKVFCAHCGNKTLKKVAVSVSDDGSLHMHFSRNPKVLNPRGLRYPLPAPRGGKHANNPHLVEDQPFPQQRLSRKARQKTNVFDPDYIAGVSPFVENDVYSRAANLQIRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1225864..1225941,1226007..1226139,1226237..1226370,1226447..1226518,1226622..1226759,1226852..1227073,1227426..1227523,1227657..1227801,1228039..1228308)
location: region:1225864-1228308:1
so has part: feature:1225864-1225941:1:exon
so has part: feature:1226007-1226139:1:exon
so has part: feature:1226237-1226370:1:exon
so has part: feature:1226447-1226518:1:exon
so has part: feature:1226622-1226759:1:exon
so has part: feature:1226852-1227073:1:exon
so has part: feature:1227426-1227523:1:exon
so has part: feature:1227657-1227801:1:exon
so has part: feature:1228039-1228308:1:exon

XP_040471740.1
type: Protein
SIO_000068: ncbiprotein

position:1225864:1
position: 1225864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228308:1
position: 1228308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225864-1225941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226007-1226139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1226237-1226370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226447-1226518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226622-1226759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226852-1227073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1227426-1227523:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1227657-1227801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228039-1228308:1:exon

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X2
translation: MGRAAMARVAHVVADTGAFLSAAPLQDIAQHLYTVPEVLAEIRDRPTRRRLAALPCELRLRRPRPDLLRLVTEFSKKTGDYPSLSAADLQVLALTCQLQAETDGPGCLRWEPQDKVRLSSTPRHPEAPLHLAGFHLPAKKRLGKGQRRPSPERSVVPPECDEFSSFLYWRAPLPSIEEELQELLNAQAISVSPEPTEEHQSSDNGASADEEEDNEEESDDEGWITPSNLRQVQQDTGHCDTAPVGIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRQARSYILRCHGCFKTTSDMTKVFCAHCGNKTLKKVAVSVSDDGSLHMHFSRNPKVLNPRGLRYPLPAPRGGKHANNPHLVEDQPFPQQRLSRKARQKTNVFDPDYIAGVSPFVENDVYSRAANLQIRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1225864..1225941,1226007..1226139,1226237..1226370,1226447..1226518,1226625..1226759,1226852..1227073,1227426..1227523,1227657..1227801,1228039..1228308)
location: region:1225864-1228308:1
so has part: feature:1225864-1225941:1:exon
so has part: feature:1226007-1226139:1:exon
so has part: feature:1226237-1226370:1:exon
so has part: feature:1226447-1226518:1:exon
so has part: feature:1226625-1226759:1:exon
so has part: feature:1226852-1227073:1:exon
so has part: feature:1227426-1227523:1:exon
so has part: feature:1227657-1227801:1:exon
so has part: feature:1228039-1228308:1:exon

XP_040471741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225864-1225941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226007-1226139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1226237-1226370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226447-1226518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226625-1226759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226852-1227073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1227426-1227523:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1227657-1227801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228039-1228308:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1229668..1305513)
location: region:1229668-1305513:-1
so has part: feature:1229668-1305513:-1:exon
subclass of: SO_0000010

121097732
type: Gene
SIO_000068: ncbigene

position:1229668:-1
position: 1229668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305513:-1
position: 1305513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229668-1305513:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040614986.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1229668..1237073,1238010..1238256,1239445..1241884,1242427..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305513))
location: region:1229668-1305513:-1
so has part: feature:1305156-1305513:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242427-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238010-1238256:-1:exon
so has part: feature:1229668-1237073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305513:-1:exon

position:1305156:-1
position: 1305156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

position:1277879:-1
position: 1277879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278004:-1
position: 1278004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

position:1264225:-1
position: 1264225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264783:-1
position: 1264783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

position:1259154:-1
position: 1259154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259346:-1
position: 1259346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

position:1254277:-1
position: 1254277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254467:-1
position: 1254467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

position:1252172:-1
position: 1252172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252344:-1
position: 1252344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

position:1248127:-1
position: 1248127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248261:-1
position: 1248261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

position:1247903:-1
position: 1247903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247955:-1
position: 1247955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

position:1246632:-1
position: 1246632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246764:-1
position: 1246764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

position:1245998:-1
position: 1245998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246075:-1
position: 1246075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1242427-1242539:-1:exon

position:1242427:-1
position: 1242427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242539:-1
position: 1242539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

position:1239445:-1
position: 1239445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241884:-1
position: 1241884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1238010-1238256:-1:exon

position:1238010:-1
position: 1238010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238256:-1
position: 1238256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1229668-1237073:-1:exon

position:1237073:-1
position: 1237073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040614985.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1229668..1237073,1238010..1238256,1239445..1241884,1242391..1242536,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305512))
location: region:1229668-1305512:-1
so has part: feature:1305156-1305512:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242536:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238010-1238256:-1:exon
so has part: feature:1229668-1237073:-1:exon

position:1305512:-1
position: 1305512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242391-1242536:-1:exon

position:1242391:-1
position: 1242391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242536:-1
position: 1242536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238010-1238256:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1229668-1237073:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040614984.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1229668..1237073,1238010..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305512))
location: region:1229668-1305512:-1
so has part: feature:1305156-1305512:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238010-1238256:-1:exon
so has part: feature:1229668-1237073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238010-1238256:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1229668-1237073:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040614987.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1229668..1237073,1238010..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1265245..1265306,1277879..1277991))
location: region:1229668-1277991:-1
so has part: feature:1277879-1277991:-1:exon
so has part: feature:1265245-1265306:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238010-1238256:-1:exon
so has part: feature:1229668-1237073:-1:exon

position:1277991:-1
position: 1277991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277879-1277991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265245-1265306:-1:exon

position:1265245:-1
position: 1265245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265306:-1
position: 1265306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238010-1238256:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1229668-1237073:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040614988.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1229668..1237073,1238010..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1265245..1265306,1270437..1270549,1277879..1277929))
location: region:1229668-1277929:-1
so has part: feature:1277879-1277929:-1:exon
so has part: feature:1270437-1270549:-1:exon
so has part: feature:1265245-1265306:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238010-1238256:-1:exon
so has part: feature:1229668-1237073:-1:exon

position:1277929:-1
position: 1277929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277879-1277929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1270437-1270549:-1:exon

position:1270437:-1
position: 1270437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270549:-1
position: 1270549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265245-1265306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1238010-1238256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1229668-1237073:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSTRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSSNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVNVKKEISSPAQHCSFEEAIKAKATGCNLEKVNIIPSALITPLMPSSMIKSEDVAPMEVSAEKRSPPVFKASSVVGPTQQTLENSMSGISTSASHLPSENENQQQMQQKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDASQQQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNYPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDNSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRAENLLPGRAENVHSQPENALSNQQQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPTMFQASNSADGEEASGQSKQMQSNVFQTMVQMQHSGESQSQVNLFSSTKSMMTVQASGTQQQGGGLFQQGGEIMSIQSGSFMQQSPHSQAQLFHSQNPIGDTQNISQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNSISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQPQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMASMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMYSSQNSMAGMQGTASPPQQQASLFHNTGGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLTSGPATLPDELMAISQPGQPQSEGQAAVPALLSQQISETSPLPSAMATNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1238018..1238256,1239445..1241884,1242391..1242536,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305228))
location: region:1238018-1305228:-1
so has part: feature:1305156-1305228:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242536:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238018-1238256:-1:exon

XP_040470919.1
type: Protein
SIO_000068: ncbiprotein

position:1238018:-1
position: 1238018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305228:-1
position: 1305228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242391-1242536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238018-1238256:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSTRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSSNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVNVKKEISSPAQHCSFEEAIKAAKATGCNLEKVNIIPSALITPLMPSSMIKSEDVAPMEASSVVGPTQQTLENSMSGISTSASHLPSENENQQQMQQKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDASQQQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNYPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDNSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRAENLLPGRAENVHSQPENALSNQQQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPTMFQASNSADGEEASGQSKQMQSNVFQTMVQMQHSGESQSQVNLFSSTKSMMTVQASGTQQQGGGLFQQGGEIMSIQSGSFMQQSPHSQAQLFHSQNPIGDTQNISQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNSISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQPQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMASMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMYSSQNSMAGMQGTASPPQQQASLFHNTGGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLTSGPATLPDELMAISQPGQPQSEGQAAVPALLSQQISETSPLPSAMATNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1238018..1238256,1239445..1241884,1242427..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305228))
location: region:1238018-1305228:-1
so has part: feature:1305156-1305228:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242427-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238018-1238256:-1:exon

XP_040470920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242427-1242539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238018-1238256:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSTRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSSNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVNVKKEISSPAQHCSFEEAIKAAKATGCNLEKVNIIPSALITPLMPSSMIKSEDVAPMEVSAEKRSPPVFKASSVVGPTQQTLENSMSGISTSASHLPSENENQQQMQQKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDASQQQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNYPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDNSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRAENLLPGRAENVHSQPENALSNQQQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPTMFQASNSADGEEASGQSKQMQSNVFQTMVQMQHSGESQSQVNLFSSTKSMMTVQASGTQQQGGGLFQQGGEIMSIQSGSFMQQSPHSQAQLFHSQNPIGDTQNISQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNSISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQPQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMASMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMYSSQNSMAGMQGTASPPQQQASLFHNTGGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLTSGPATLPDELMAISQPGQPQSEGQAAVPALLSQQISETSPLPSAMATNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1238018..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264783,1277879..1278004,1305156..1305228))
location: region:1238018-1305228:-1
so has part: feature:1305156-1305228:-1:exon
so has part: feature:1277879-1278004:-1:exon
so has part: feature:1264225-1264783:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238018-1238256:-1:exon

XP_040470918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305156-1305228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277879-1278004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264225-1264783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238018-1238256:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSTRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSSNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVNVKKEISSPAQHCSFEEAIKAAKATGCNLEKVNIIPSALITPLMPSSMIKSEDVAPMEVSAEKRSPPVFKASSVVGPTQQTLENSMSGISTSASHLPSENENQQQMQQKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDASQQQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNYPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDNSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRAENLLPGRAENVHSQPENALSNQQQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPTMFQASNSADGEEASGQSKQMQSNVFQTMVQMQHSGESQSQVNLFSSTKSMMTVQASGTQQQGGGLFQQGGEIMSIQSGSFMQQSPHSQAQLFHSQNPIGDTQNISQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNSISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQPQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMASMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMYSSQNSMAGMQGTASPPQQQASLFHNTGGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLTSGPATLPDELMAISQPGQPQSEGQAAVPALLSQQISETSPLPSAMATNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1238018..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264754))
location: region:1238018-1264754:-1
so has part: feature:1264225-1264754:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238018-1238256:-1:exon

XP_040470921.1
type: Protein
SIO_000068: ncbiprotein

position:1264754:-1
position: 1264754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264225-1264754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238018-1238256:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSTRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSSNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVNVKKEISSPAQHCSFEEAIKAAKATGCNLEKVNIIPSALITPLMPSSMIKSEDVAPMEVSAEKRSPPVFKASSVVGPTQQTLENSMSGISTSASHLPSENENQQQMQQKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDASQQQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNYPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSDNSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSDTAVHSRAENLLPGRAENVHSQPENALSNQQQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPTMFQASNSADGEEASGQSKQMQSNVFQTMVQMQHSGESQSQVNLFSSTKSMMTVQASGTQQQGGGLFQQGGEIMSIQSGSFMQQSPHSQAQLFHSQNPIGDTQNISQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNSISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQPQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMASMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMYSSQNSMAGMQGTASPPQQQASLFHNTGGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLTSGPATLPDELMAISQPGQPQSEGQAAVPALLSQQISETSPLPSAMATNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1238018..1238256,1239445..1241884,1242391..1242539,1245998..1246075,1246632..1246764,1247903..1247955,1248127..1248261,1252172..1252344,1254277..1254467,1259154..1259346,1264225..1264754))
location: region:1238018-1264754:-1
so has part: feature:1264225-1264754:-1:exon
so has part: feature:1259154-1259346:-1:exon
so has part: feature:1254277-1254467:-1:exon
so has part: feature:1252172-1252344:-1:exon
so has part: feature:1248127-1248261:-1:exon
so has part: feature:1247903-1247955:-1:exon
so has part: feature:1246632-1246764:-1:exon
so has part: feature:1245998-1246075:-1:exon
so has part: feature:1242391-1242539:-1:exon
so has part: feature:1239445-1241884:-1:exon
so has part: feature:1238018-1238256:-1:exon

XP_040470922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1264225-1264754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259154-1259346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254277-1254467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252172-1252344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1248127-1248261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247903-1247955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246632-1246764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245998-1246075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1242391-1242539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1239445-1241884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238018-1238256:-1:exon

LOC121098035
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1322962..1335798)
location: region:1322962-1335798:-1
so has part: feature:1322962-1335798:-1:exon
subclass of: SO_0000010

121098035
type: Gene
SIO_000068: ncbigene

position:1322962:-1
position: 1322962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335798:-1
position: 1335798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322962-1335798:-1:exon

LOC121098035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121098035
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615570.1
SIO_010081: LOC121098035
subclass of: SO_0000673
so part of: LOC121098035
location: complement(join(1322962..1323691,1324690..1324721,1326628..1326654,1327196..1327324,1335643..1335798))
location: region:1322962-1335798:-1
so has part: feature:1335643-1335798:-1:exon
so has part: feature:1327196-1327324:-1:exon
so has part: feature:1326628-1326654:-1:exon
so has part: feature:1324690-1324721:-1:exon
so has part: feature:1322962-1323691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1335643-1335798:-1:exon

position:1335643:-1
position: 1335643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327196-1327324:-1:exon

position:1327196:-1
position: 1327196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327324:-1
position: 1327324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1326628-1326654:-1:exon

position:1326628:-1
position: 1326628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326654:-1
position: 1326654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324690-1324721:-1:exon

position:1324690:-1
position: 1324690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324721:-1
position: 1324721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1322962-1323691:-1:exon

position:1323691:-1
position: 1323691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121098035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121098035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MEPGERTEAGACAAAEAGPIFTLEEVGKRNSSREAWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEIHPHDRKKEGSKNPSMTSSGQASFWSTWLIPIFGALVIGLMYRYYMLDGRTS
SIO_010081: LOC121098035
subclass of: SO_0000673
so part of: LOC121098035
location: complement(join(1323601..1323691,1324690..1324721,1326628..1326654,1327196..1327324,1335643..1335798))
location: region:1323601-1335798:-1
so has part: feature:1335643-1335798:-1:exon
so has part: feature:1327196-1327324:-1:exon
so has part: feature:1326628-1326654:-1:exon
so has part: feature:1324690-1324721:-1:exon
so has part: feature:1323601-1323691:-1:exon

XP_040471504.1
type: Protein
SIO_000068: ncbiprotein

position:1323601:-1
position: 1323601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335643-1335798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327196-1327324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1326628-1326654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324690-1324721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1323601-1323691:-1:exon

LOC121098036
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121098036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1327331..1335394)
location: region:1327331-1335394:-1
so has part: feature:1327331-1335394:-1:exon
subclass of: SO_0000011

121098036
type: Gene
SIO_000068: ncbigene

position:1327331:-1
position: 1327331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335394:-1
position: 1335394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327331-1335394:-1:exon

LOC121098036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121098036
product: uncharacterized LOC121098036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005831147.1
SIO_010081: LOC121098036
subclass of: SO_0000673
so part of: LOC121098036
location: complement(join(1327331..1329943,1330393..1332047,1332364..1335394))
location: region:1327331-1335394:-1
so has part: feature:1332364-1335394:-1:exon
so has part: feature:1330393-1332047:-1:exon
so has part: feature:1327331-1329943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332364-1335394:-1:exon

position:1332364:-1
position: 1332364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1330393-1332047:-1:exon

position:1330393:-1
position: 1330393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332047:-1
position: 1332047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327331-1329943:-1:exon

position:1329943:-1
position: 1329943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1335875..1352581
location: region:1335875-1352581:1
so has part: feature:1335875-1352581:1:exon
subclass of: SO_0000010

121098029
type: Gene
SIO_000068: ncbigene

position:1335875:1
position: 1335875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352581:1
position: 1352581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335875-1352581:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040615564.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1335875..1335964,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1352581)
location: region:1335875-1352581:1
so has part: feature:1335875-1335964:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1352581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1335875-1335964:1:exon

position:1335964:1
position: 1335964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345135-1345221:1:exon

position:1345135:1
position: 1345135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345221:1
position: 1345221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345867-1346013:1:exon

position:1345867:1
position: 1345867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1346013:1
position: 1346013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1346370-1346779:1:exon

position:1346370:1
position: 1346370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1346779:1
position: 1346779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1347342-1347728:1:exon

position:1347342:1
position: 1347342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1347728:1
position: 1347728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1349795-1349880:1:exon

position:1349795:1
position: 1349795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349880:1
position: 1349880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1350556-1350608:1:exon

position:1350556:1
position: 1350556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350608:1
position: 1350608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1351601-1352581:1:exon

position:1351601:1
position: 1351601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X5
translation: MARGGSRQIPPANEERAAPAVGRRQAVIVCIKNGEFDKASKIVKRHMGKEPKSQKKRDKLLTVIQEKNLTHPLVRNFSYKNFQQSVFQFLKTYVDDSEPLLLTIMKKTLNSEHAEEPKRSSATPESANKPKNQAAALEPSERAEGPAEAPKPAETAKDLNGAPSSAERADHPTAVPELMEEPSDSAAAPEPVEGTTDPARTPEHIIAAGGILEDASEPMEVSKEPAAASELPGVSRDLERQPSGNVTTYGISVLREAFKVLSDSQDSDALFTKLDETDFSFPKQLSPSVSHRTKKQKEKENQDSDISYPPAIPCEGKRLYTISNLVMEQDSEYTDLSESPDSSQELPVFSASRCAQKPHEQPVPTKRQKSLRGRWVSSYVEEVKDQWSEEDELFPNAPSYRTNSRKTSVSGSKKQTWTVQESEWIKEGVKNFGEGRWKAICEKYPFQNRTAVMIKDRWRTMKKLGIL
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1335890..1335964,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1351759)
location: region:1335890-1351759:1
so has part: feature:1335890-1335964:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1351759:1:exon

XP_040471498.1
type: Protein
SIO_000068: ncbiprotein

position:1335890:1
position: 1335890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351759:1
position: 1351759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335890-1335964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1351601-1351759:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_040615561.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343639..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1351601..1352581)
location: region:1343639-1352581:1
so has part: feature:1343639-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1351601-1352581:1:exon

position:1343639:1
position: 1343639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343639-1343880:1:exon

position:1343880:1
position: 1343880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

position:1344052:1
position: 1344052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344147:1
position: 1344147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

position:1344703:1
position: 1344703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344833:1
position: 1344833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351601-1352581:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_040615562.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343639..1343880,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1352581)
location: region:1343639-1352581:1
so has part: feature:1343639-1343880:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1352581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1343639-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351601-1352581:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040615559.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343640..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1352581)
location: region:1343640-1352581:1
so has part: feature:1343640-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1352581:1:exon

position:1343640:1
position: 1343640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343640-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1351601-1352581:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_040615563.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343641..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347498..1347728,1349795..1349880,1350556..1350608,1351601..1352581)
location: region:1343641-1352581:1
so has part: feature:1343641-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347498-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1352581:1:exon

position:1343641:1
position: 1343641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343641-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347498-1347728:1:exon

position:1347498:1
position: 1347498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1351601-1352581:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X1
translation: MKKRARSAWREGMAARSGVSEEMMNSWVLQFYFHQAMAAYRSGRNGDFRQLRDVMQALLLRPLDKEPTVIQMLRVMQLLSRIEEGENLDCAFDKELELTPLESAIGVLELVQRDFSIAEKTMEDVQQRVKEAAVIVCIKNGEFDKASKIVKRHMGKEPKSQKKRDKLLTVIQEKNLTHPLVRNFSYKNFQQSVFQFLKTYVDDSEPLLLTIMKKTLNSEHAEEPKRSSATPESANKPKNQAAALEPSERAEGPAEAPKPAETAKDLNGAPSSAERADHPTAVPELMEEPSDSAAAPEPVEGTTDPARTPEHIIAAGGILEDASEPMEVSKEPAAASELPGVSRDLERQPSGNVTTYGISVLREAFKVLSDSQDSDALFTKLDETDFSFPKQLSPSVSHRTKKQKEKENQDSDISYPPAIPCEGKRLYTISNLVMEQDSEYTDLSESPDSSQELPVFSASRCAQKPHEQPVPTKRQKSLRGRWVSSYVEEVKDQWSEEDELFPNAPSYRTNSRKTSVSGSKKQTWTVQESEWIKEGVKNFGEGRWKAICEKYPFQNRTAVMIKDRWRTMKKLGIL
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343712..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1351759)
location: region:1343712-1351759:1
so has part: feature:1343712-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1351759:1:exon

XP_040471493.1
type: Protein
SIO_000068: ncbiprotein

position:1343712:1
position: 1343712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343712-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1351601-1351759:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X4
translation: MKKRARSAWREGMAARSGVSEEMMNSWVLQFYFHQAMAAYRSGRNGDFRQLRDVMQALLLRPLDKEPTVIQMLRVMQLLSRIEEGENLDCAFDKELELTPLESAIGVLELVQRDFSIAEKTMEDVQQRVKEAAVIVCIKNGEFDKASKIVKRHMGKEPKSQKKRDKLLTVIQEKNLTHPLVRNFSYKNFQQSVFQFLKTYVDDSEPLLLTIMKKTLNSEHAEEPKRSSATPESANKPKNQAAALEPSERAEGPAEAPKPAETAKDLNGAPSSAERADHPTAVPELMEEPSDSAAAPEPVEGTTDPARTPEHIIAAGGILEDASEPMEVSKEPAAASELPGVSRDLERTKKQKEKENQDSDISYPPAIPCEGKRLYTISNLVMEQDSEYTDLSESPDSSQELPVFSASRCAQKPHEQPVPTKRQKSLRGRWVSSYVEEVKDQWSEEDELFPNAPSYRTNSRKTSVSGSKKQTWTVQESEWIKEGVKNFGEGRWKAICEKYPFQNRTAVMIKDRWRTMKKLGIL
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343712..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347498..1347728,1349795..1349880,1350556..1350608,1351601..1351759)
location: region:1343712-1351759:1
so has part: feature:1343712-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347498-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1351759:1:exon

XP_040471497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1343712-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347498-1347728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1351601-1351759:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X3
translation: MKKRARSAWREGMAARSGVSEEMMNSWVLQFYFHQAMAAYRSGRNGDFRQLRDVMQDCAFDKELELTPLESAIGVLELVQRDFSIAEKTMEDVQQRVKEAAVIVCIKNGEFDKASKIVKRHMGKEPKSQKKRDKLLTVIQEKNLTHPLVRNFSYKNFQQSVFQFLKTYVDDSEPLLLTIMKKTLNSEHAEEPKRSSATPESANKPKNQAAALEPSERAEGPAEAPKPAETAKDLNGAPSSAERADHPTAVPELMEEPSDSAAAPEPVEGTTDPARTPEHIIAAGGILEDASEPMEVSKEPAAASELPGVSRDLERQPSGNVTTYGISVLREAFKVLSDSQDSDALFTKLDETDFSFPKQLSPSVSHRTKKQKEKENQDSDISYPPAIPCEGKRLYTISNLVMEQDSEYTDLSESPDSSQELPVFSASRCAQKPHEQPVPTKRQKSLRGRWVSSYVEEVKDQWSEEDELFPNAPSYRTNSRKTSVSGSKKQTWTVQESEWIKEGVKNFGEGRWKAICEKYPFQNRTAVMIKDRWRTMKKLGIL
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343712..1343880,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1350556..1350608,1351601..1351759)
location: region:1343712-1351759:1
so has part: feature:1343712-1343880:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1350556-1350608:1:exon
so has part: feature:1351601-1351759:1:exon

XP_040471496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1343712-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1350556-1350608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351601-1351759:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X2
translation: MKKRARSAWREGMAARSGVSEEMMNSWVLQFYFHQAMAAYRSGRNGDFRQLRDVMQALLLRPLDKEPTVIQMLRVMQLLSRIEEGENLDCAFDKELELTPLESAIGVLELVQRDFSIAEKTMEDVQQRVKEAAVIVCIKNGEFDKASKIVKRHMGKEPKSQKKRDKLLTVIQEKNLTHPLVRNFSYKNFQQSVFQFLKTYVDDSEPLLLTIMKKTLNSEHAEEPKRSSATPESANKPKNQAAALEPSERAEGPAEAPKPAETAKDLNGAPSSAERADHPTAVPELMEEPSDSAAAPEPVEGTTDPARTPEHIIAAGGILEDASEPMEVSKEPAAASELPGVSRDLERQPSGNVTTYGISVLREAFKVLSDSQDSDALFTKLDETDFSFPKQLSPSVSHRTKKQKEKENQDSDISYPPAIPCEGKRLYTISNLVMEQDSEYTDLSESPDSSQELPVFSASRCAQKPHEQPVPTKRQKSLRGRWVSSYVEEVKDQWSEEDELFPNAHMDSTRERVDQRGREELWRREMEGHLREISLPEPHCSDD
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1343712..1343880,1344052..1344147,1344703..1344833,1345135..1345221,1345867..1346013,1346370..1346779,1347342..1347728,1349795..1349880,1351601..1351719)
location: region:1343712-1351719:1
so has part: feature:1343712-1343880:1:exon
so has part: feature:1344052-1344147:1:exon
so has part: feature:1344703-1344833:1:exon
so has part: feature:1345135-1345221:1:exon
so has part: feature:1345867-1346013:1:exon
so has part: feature:1346370-1346779:1:exon
so has part: feature:1347342-1347728:1:exon
so has part: feature:1349795-1349880:1:exon
so has part: feature:1351601-1351719:1:exon

XP_040471495.1
type: Protein
SIO_000068: ncbiprotein

position:1351719:1
position: 1351719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343712-1343880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1344052-1344147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344703-1344833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345135-1345221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345867-1346013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346370-1346779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347342-1347728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349795-1349880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351601-1351719:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1353538..1357573
location: region:1353538-1357573:1
so has part: feature:1353538-1357573:1:exon
subclass of: SO_0000010

121098032
type: Gene
SIO_000068: ncbigene

position:1353538:1
position: 1353538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357573:1
position: 1357573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353538-1357573:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TMED6
product: transmembrane p24 trafficking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040615568.1
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1353538..1353843,1355958..1356084,1356708..1356859,1357039..1357573)
location: region:1353538-1357573:1
so has part: feature:1353538-1353843:1:exon
so has part: feature:1355958-1356084:1:exon
so has part: feature:1356708-1356859:1:exon
so has part: feature:1357039-1357573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1353538-1353843:1:exon

position:1353843:1
position: 1353843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355958-1356084:1:exon

position:1355958:1
position: 1355958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356084:1
position: 1356084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1356708-1356859:1:exon

position:1356708:1
position: 1356708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356859:1
position: 1356859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1357039-1357573:1:exon

position:1357039:1
position: 1357039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6
translation: MLLLLVLALLGPASCPRTEPLSGSSQEPLFHGADRYDFAIVIPAGTVECFWQFAHQTGNFFFSYEVQRATGIANNRNVLATASDPNGFRLGASQDVRGQINFLTKETGFYQLCLDNQQNHFGFVQVYLNFGVYYEDFNVENKQLEEKKELNDTLEAIGVSIRKLQVHIFHMWRFYNFARMRKAADSFLLESNYNYVNWWSMAQSCVIVLSGVLQLYFLKRLFNVQTSSRQKC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1353649..1353843,1355958..1356084,1356708..1356859,1357039..1357263)
location: region:1353649-1357263:1
so has part: feature:1353649-1353843:1:exon
so has part: feature:1355958-1356084:1:exon
so has part: feature:1356708-1356859:1:exon
so has part: feature:1357039-1357263:1:exon

XP_040471502.1
type: Protein
SIO_000068: ncbiprotein

position:1353649:1
position: 1353649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357263:1
position: 1357263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353649-1353843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355958-1356084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356708-1356859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357039-1357263:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1357870..1359093)
location: region:1357870-1359093:-1
so has part: feature:1357870-1359093:-1:exon
subclass of: SO_0000010

121098033
type: Gene
SIO_000068: ncbigene

position:1357870:-1
position: 1357870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359093:-1
position: 1359093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357870-1359093:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615569.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1357870..1358211,1358310..1358450,1358533..1358671,1358781..1358867,1358982..1359093))
location: region:1357870-1359093:-1
so has part: feature:1358982-1359093:-1:exon
so has part: feature:1358781-1358867:-1:exon
so has part: feature:1358533-1358671:-1:exon
so has part: feature:1358310-1358450:-1:exon
so has part: feature:1357870-1358211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1358982-1359093:-1:exon

position:1358982:-1
position: 1358982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1358781-1358867:-1:exon

position:1358781:-1
position: 1358781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358867:-1
position: 1358867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1358533-1358671:-1:exon

position:1358533:-1
position: 1358533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358671:-1
position: 1358671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358310-1358450:-1:exon

position:1358310:-1
position: 1358310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358450:-1
position: 1358450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357870-1358211:-1:exon

position:1358211:-1
position: 1358211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: MRPLTEAETRAVFEKLGRYIGENIQLLVDRPDGTYCFRLHRDRVYYLSEKLLKVAVSIPRDNLVALGTCFGKFTKTQKFRLSVTALDFLAPYAKYKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQECRKVDPMAIVVFHQADVGEYVRNEDTLA
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1358092..1358211,1358310..1358450,1358533..1358671,1358781..1358867,1358982..1359037))
location: region:1358092-1359037:-1
so has part: feature:1358982-1359037:-1:exon
so has part: feature:1358781-1358867:-1:exon
so has part: feature:1358533-1358671:-1:exon
so has part: feature:1358310-1358450:-1:exon
so has part: feature:1358092-1358211:-1:exon

XP_040471503.1
type: Protein
SIO_000068: ncbiprotein

position:1358092:-1
position: 1358092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359037:-1
position: 1359037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358982-1359037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358781-1358867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358533-1358671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358310-1358450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358092-1358211:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1359127..1363780
location: region:1359127-1363780:1
so has part: feature:1359127-1363780:1:exon
subclass of: SO_0000010

121098030
type: Gene
SIO_000068: ncbigene

position:1359127:1
position: 1359127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363780:1
position: 1363780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359127-1363780:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: COG8
product: component of oligomeric golgi complex 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040615566.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1359127..1359470,1359806..1360013,1360090..1360908,1361556..1361724,1361886..1362014,1363064..1363780)
location: region:1359127-1363780:1
so has part: feature:1359127-1359470:1:exon
so has part: feature:1359806-1360013:1:exon
so has part: feature:1360090-1360908:1:exon
so has part: feature:1361556-1361724:1:exon
so has part: feature:1361886-1362014:1:exon
so has part: feature:1363064-1363780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359127-1359470:1:exon

position:1359470:1
position: 1359470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359806-1360013:1:exon

position:1359806:1
position: 1359806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360013:1
position: 1360013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360090-1360908:1:exon

position:1360090:1
position: 1360090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360908:1
position: 1360908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1361556-1361724:1:exon

position:1361556:1
position: 1361556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361724:1
position: 1361724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1361886-1362014:1:exon

position:1361886:1
position: 1361886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362014:1
position: 1362014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1363064-1363780:1:exon

position:1363064:1
position: 1363064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: COG8
product: component of oligomeric golgi complex 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_040615565.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1359127..1359470,1359806..1360013,1360090..1360908,1361556..1361724,1363064..1363780)
location: region:1359127-1363780:1
so has part: feature:1359127-1359470:1:exon
so has part: feature:1359806-1360013:1:exon
so has part: feature:1360090-1360908:1:exon
so has part: feature:1361556-1361724:1:exon
so has part: feature:1363064-1363780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359127-1359470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359806-1360013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360090-1360908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361556-1361724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1363064-1363780:1:exon

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 8 isoform X2
translation: MAAAAEEARLLAWLRGPAAAGPGGPELSAYVAELAALGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAGRGFGGIESRLGSLLGRLPALQDACRNFMRDAEEIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNGYYEEALELAAYVRRLERKHSNIPVIQGIVDEVRQSTQLMLNQLIQQLRTNIQLPACLRVIGYLRRMDVFTEAELRIKFLQARDAWLRSIQASIPDDDPYFHITKTIETCRVHLFDIITQYRAIFSDEEPLLPPEGQALNEGAIFHGWVLQKVSQFLQTLERDLQRGVGSRLDSLLGQCMYFGLSFSRVGADFRGQLAPLFQHVAATAFRKAVEEVVEKFREEMNSYTLISTPSVLGGSAGVPMPTAQPGTLQPPMVLLDFPPLACFLNGILVAFNDLRLCCPIALAQDVTACLEAALGEVTKTILAFHRAEEAAFSGREQELFVQFCTAFLEDLLPYLNRCLQVLFPPAQIAQALGVPPTQLQRFGRLGRIDVAALREPLAFLLPALGEEEPAQERPPRMDEHGKPVSWEATGWAARIVQHEMDHLDGILYIDRMDTRTFTNVSWMELLD
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1359151..1359470,1359806..1360013,1360090..1360908,1361556..1361724,1361886..1362014,1363064..1363221)
location: region:1359151-1363221:1
so has part: feature:1359151-1359470:1:exon
so has part: feature:1359806-1360013:1:exon
so has part: feature:1360090-1360908:1:exon
so has part: feature:1361556-1361724:1:exon
so has part: feature:1361886-1362014:1:exon
so has part: feature:1363064-1363221:1:exon

XP_040471500.1
type: Protein
SIO_000068: ncbiprotein

position:1359151:1
position: 1359151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363221:1
position: 1363221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359151-1359470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359806-1360013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360090-1360908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361556-1361724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1361886-1362014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363064-1363221:1:exon

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 8 isoform X1
translation: MAAAAEEARLLAWLRGPAAAGPGGPELSAYVAELAALGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAGRGFGGIESRLGSLLGRLPALQDACRNFMRDAEEIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNGYYEEALELAAYVRRLERKHSNIPVIQGIVDEVRQSTQLMLNQLIQQLRTNIQLPACLRVIGYLRRMDVFTEAELRIKFLQARDAWLRSIQASIPDDDPYFHITKTIETCRVHLFDIITQYRAIFSDEEPLLPPEGQALNEGAIFHGWVLQKVSQFLQTLERDLQRGVGSRLDSLLGQCMYFGLSFSRVGADFRGQLAPLFQHVAATAFRKAVEEVVEKFREEMNSYTLISTPSVLGGSAGVPMPTAQPGTLQPPMVLLDFPPLACFLNGILVAFNDLRLCCPIALAQDVTACLEAALGEVTKTILAFHRAEEAAFSGREQELFVQFCTAFLEDLLPYLNRCLQVLFPPAQIAQALGMDEHGKPVSWEATGWAARIVQHEMDHLDGILYIDRMDTRTFTNVSWMELLD
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1359151..1359470,1359806..1360013,1360090..1360908,1361556..1361724,1363064..1363221)
location: region:1359151-1363221:1
so has part: feature:1359151-1359470:1:exon
so has part: feature:1359806-1360013:1:exon
so has part: feature:1360090-1360908:1:exon
so has part: feature:1361556-1361724:1:exon
so has part: feature:1363064-1363221:1:exon

XP_040471499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1359151-1359470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359806-1360013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360090-1360908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361556-1361724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1363064-1363221:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1363350..1367822)
location: region:1363350-1367822:-1
so has part: feature:1363350-1367822:-1:exon
subclass of: SO_0000010

121098031
type: Gene
SIO_000068: ncbigene

position:1363350:-1
position: 1363350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367822:-1
position: 1367822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363350-1367822:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_040615567.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1363350..1364190,1364608..1364748,1364883..1365102,1365200..1365281,1365431..1365579,1365924..1366080,1366263..1366382,1366696..1366757,1366861..1367008,1367118..1367229,1367690..1367822))
location: region:1363350-1367822:-1
so has part: feature:1367690-1367822:-1:exon
so has part: feature:1367118-1367229:-1:exon
so has part: feature:1366861-1367008:-1:exon
so has part: feature:1366696-1366757:-1:exon
so has part: feature:1366263-1366382:-1:exon
so has part: feature:1365924-1366080:-1:exon
so has part: feature:1365431-1365579:-1:exon
so has part: feature:1365200-1365281:-1:exon
so has part: feature:1364883-1365102:-1:exon
so has part: feature:1364608-1364748:-1:exon
so has part: feature:1363350-1364190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367690-1367822:-1:exon

position:1367690:-1
position: 1367690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1367118-1367229:-1:exon

position:1367118:-1
position: 1367118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367229:-1
position: 1367229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366861-1367008:-1:exon

position:1366861:-1
position: 1366861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367008:-1
position: 1367008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1366696-1366757:-1:exon

position:1366696:-1
position: 1366696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366757:-1
position: 1366757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1366263-1366382:-1:exon

position:1366263:-1
position: 1366263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366382:-1
position: 1366382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1365924-1366080:-1:exon

position:1365924:-1
position: 1365924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366080:-1
position: 1366080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1365431-1365579:-1:exon

position:1365431:-1
position: 1365431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365579:-1
position: 1365579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1365200-1365281:-1:exon

position:1365200:-1
position: 1365200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365281:-1
position: 1365281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1364883-1365102:-1:exon

position:1364883:-1
position: 1364883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365102:-1
position: 1365102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1364608-1364748:-1:exon

position:1364608:-1
position: 1364608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364748:-1
position: 1364748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1363350-1364190:-1:exon

position:1364190:-1
position: 1364190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MTAATLQKAIDLVTRATEEDKAKNYEEALRLYQHAVECFLHAIKYEAHSDKAKESIRAKCTQYLDRAEKLKEYLRSKDKQGKKPVKESQNDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFKIHLGNTPHCLTDANIQELACKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRTTPGAFVDDLLTPCSPGDPGATEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNADDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1364089..1364190,1364608..1364748,1364883..1365102,1365200..1365281,1365431..1365579,1365924..1366080,1366263..1366382,1366696..1366757,1366861..1367008,1367118..1367229,1367690..1367710))
location: region:1364089-1367710:-1
so has part: feature:1367690-1367710:-1:exon
so has part: feature:1367118-1367229:-1:exon
so has part: feature:1366861-1367008:-1:exon
so has part: feature:1366696-1366757:-1:exon
so has part: feature:1366263-1366382:-1:exon
so has part: feature:1365924-1366080:-1:exon
so has part: feature:1365431-1365579:-1:exon
so has part: feature:1365200-1365281:-1:exon
so has part: feature:1364883-1365102:-1:exon
so has part: feature:1364608-1364748:-1:exon
so has part: feature:1364089-1364190:-1:exon

XP_040471501.1
type: Protein
SIO_000068: ncbiprotein

position:1364089:-1
position: 1364089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367710:-1
position: 1367710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367690-1367710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367118-1367229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366861-1367008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366696-1366757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366263-1366382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365924-1366080:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365431-1365579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365200-1365281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364883-1365102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1364608-1364748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1364089-1364190:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1369123..1376692)
location: region:1369123-1376692:-1
so has part: feature:1369123-1376692:-1:exon
subclass of: SO_0000010

121098046
type: Gene
SIO_000068: ncbigene

position:1369123:-1
position: 1369123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376692:-1
position: 1376692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369123-1376692:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SNTB2
product: syntrophin beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040615601.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1369123..1369842,1370093..1370254,1370373..1370569,1370764..1370906,1371346..1371556,1371956..1372166,1376249..1376692))
location: region:1369123-1376692:-1
so has part: feature:1376249-1376692:-1:exon
so has part: feature:1371956-1372166:-1:exon
so has part: feature:1371346-1371556:-1:exon
so has part: feature:1370764-1370906:-1:exon
so has part: feature:1370373-1370569:-1:exon
so has part: feature:1370093-1370254:-1:exon
so has part: feature:1369123-1369842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376249-1376692:-1:exon

position:1376249:-1
position: 1376249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371956-1372166:-1:exon

position:1371956:-1
position: 1371956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372166:-1
position: 1372166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371346-1371556:-1:exon

position:1371346:-1
position: 1371346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371556:-1
position: 1371556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1370764-1370906:-1:exon

position:1370764:-1
position: 1370764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370906:-1
position: 1370906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1370373-1370569:-1:exon

position:1370373:-1
position: 1370373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370569:-1
position: 1370569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1370093-1370254:-1:exon

position:1370093:-1
position: 1370093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370254:-1
position: 1370254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1369123-1369842:-1:exon

position:1369842:-1
position: 1369842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: SNTB2
product: syntrophin beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_040615600.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1369123..1369842,1370093..1370274,1370373..1370569,1370764..1370906,1371346..1371556,1371956..1372166,1376249..1376692))
location: region:1369123-1376692:-1
so has part: feature:1376249-1376692:-1:exon
so has part: feature:1371956-1372166:-1:exon
so has part: feature:1371346-1371556:-1:exon
so has part: feature:1370764-1370906:-1:exon
so has part: feature:1370373-1370569:-1:exon
so has part: feature:1370093-1370274:-1:exon
so has part: feature:1369123-1369842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376249-1376692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371956-1372166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371346-1371556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370764-1370906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370373-1370569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1370093-1370274:-1:exon

position:1370274:-1
position: 1370274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1369123-1369842:-1:exon

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin isoform X1
translation: MAVWTRACKTGLLELLLRERWVRVAAELSGEALSLTAEPGGGETAVLNGVVNGNAEAAPGCVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGREVILEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQCPRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFTALHANIAALLPQVLAELNAMLGTGGTVAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALGCELTFATRTGSRQGVEMHVFRVETHRDLSSWTRVLVQGCHAAAELMKEVTVGCTLGGQEVQLSIHYEGGFTICREEPGSSVLFRYPYERLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFILHTFLSAKVTRMGLLA
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1369750..1369842,1370093..1370274,1370373..1370569,1370764..1370906,1371346..1371556,1371956..1372166,1376249..1376675))
location: region:1369750-1376675:-1
so has part: feature:1376249-1376675:-1:exon
so has part: feature:1371956-1372166:-1:exon
so has part: feature:1371346-1371556:-1:exon
so has part: feature:1370764-1370906:-1:exon
so has part: feature:1370373-1370569:-1:exon
so has part: feature:1370093-1370274:-1:exon
so has part: feature:1369750-1369842:-1:exon

XP_040471534.1
type: Protein
SIO_000068: ncbiprotein

position:1369750:-1
position: 1369750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376675:-1
position: 1376675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376249-1376675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371956-1372166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371346-1371556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370764-1370906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370373-1370569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1370093-1370274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369750-1369842:-1:exon

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin isoform X2
translation: MAVWTRACKTGLLELLLRERWVRVAAELSGEALSLTAEPGGGETAVLNGVVNGNAEAAPGCVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGREVILEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQCPRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFTALHANIAALLPQVLAELNAMLGTGGTVAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALGCELTFATRTGSRQGVEMHVFRVETHRDLSSWTRVLVQGCHAAAELMKEVTVGGPALHPLRGRLHHLPRGAGQQCPLPLPLREAEDVGGRWHQDPLPGLRGS
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1370103..1370254,1370373..1370569,1370764..1370906,1371346..1371556,1371956..1372166,1376249..1376675))
location: region:1370103-1376675:-1
so has part: feature:1376249-1376675:-1:exon
so has part: feature:1371956-1372166:-1:exon
so has part: feature:1371346-1371556:-1:exon
so has part: feature:1370764-1370906:-1:exon
so has part: feature:1370373-1370569:-1:exon
so has part: feature:1370103-1370254:-1:exon

XP_040471535.1
type: Protein
SIO_000068: ncbiprotein

position:1370103:-1
position: 1370103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376249-1376675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371956-1372166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371346-1371556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370764-1370906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370373-1370569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1370103-1370254:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1377624..1382702)
location: region:1377624-1382702:-1
so has part: feature:1377624-1382702:-1:exon
subclass of: SO_0000010

121098045
type: Gene
SIO_000068: ncbigene

position:1377624:-1
position: 1377624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382702:-1
position: 1382702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377624-1382702:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: UTP4
product: UTP4 small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_040615598.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1377624..1377825,1378161..1378271,1378432..1378617,1378899..1378994,1379185..1379291,1379581..1379740,1379880..1380002,1380131..1380195,1380586..1380682,1380984..1381075,1381156..1381327,1381535..1381743,1381860..1381949,1382072..1382156,1382268..1382459,1382530..1382702))
location: region:1377624-1382702:-1
so has part: feature:1382530-1382702:-1:exon
so has part: feature:1382268-1382459:-1:exon
so has part: feature:1382072-1382156:-1:exon
so has part: feature:1381860-1381949:-1:exon
so has part: feature:1381535-1381743:-1:exon
so has part: feature:1381156-1381327:-1:exon
so has part: feature:1380984-1381075:-1:exon
so has part: feature:1380586-1380682:-1:exon
so has part: feature:1380131-1380195:-1:exon
so has part: feature:1379880-1380002:-1:exon
so has part: feature:1379581-1379740:-1:exon
so has part: feature:1379185-1379291:-1:exon
so has part: feature:1378899-1378994:-1:exon
so has part: feature:1378432-1378617:-1:exon
so has part: feature:1378161-1378271:-1:exon
so has part: feature:1377624-1377825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382530-1382702:-1:exon

position:1382530:-1
position: 1382530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382268-1382459:-1:exon

position:1382268:-1
position: 1382268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382459:-1
position: 1382459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382072-1382156:-1:exon

position:1382072:-1
position: 1382072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382156:-1
position: 1382156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381860-1381949:-1:exon

position:1381860:-1
position: 1381860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381949:-1
position: 1381949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1381535-1381743:-1:exon

position:1381535:-1
position: 1381535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381743:-1
position: 1381743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1381156-1381327:-1:exon

position:1381156:-1
position: 1381156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381327:-1
position: 1381327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1380984-1381075:-1:exon

position:1380984:-1
position: 1380984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381075:-1
position: 1381075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1380586-1380682:-1:exon

position:1380586:-1
position: 1380586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380682:-1
position: 1380682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1380131-1380195:-1:exon

position:1380131:-1
position: 1380131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380195:-1
position: 1380195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1379880-1380002:-1:exon

position:1379880:-1
position: 1379880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380002:-1
position: 1380002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1379581-1379740:-1:exon

position:1379581:-1
position: 1379581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379740:-1
position: 1379740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1379185-1379291:-1:exon

position:1379185:-1
position: 1379185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379291:-1
position: 1379291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1378899-1378994:-1:exon

position:1378899:-1
position: 1378899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378994:-1
position: 1378994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1378432-1378617:-1:exon

position:1378432:-1
position: 1378432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378617:-1
position: 1378617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1378161-1378271:-1:exon

position:1378161:-1
position: 1378161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378271:-1
position: 1378271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1377624-1377825:-1:exon

position:1377825:-1
position: 1377825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog
translation: MGEFEVHRVRFFGLVPAGVRCLAWHPRGGRLALARIDGTVEIYNFAANYFQEKVIPGSDARSVEALCWAAGERLFGAGLGGEVTEYDLARLCVARSVDGCGGPIWSMAANSSGTQLAIGCEDGSVKLFQVVSGGIEFERNLDRRKGRILCLSWHPSGTHIAAGSIDVFRVLNVSSGQTVQRIMVNYHVQKVKRECIVWSIAFLSSGTVVTSDSFGRVQFWDWEQGTLLESHTVSTSAVLSLAVSEKEDSIVVGTSTGATYQFQLLPVKMGSLEKRWVRTKPFQHHTHDVRAVAHSSVALISGGLDAQLVIRPLMEKVQKKGYDAALRKITFPHRRLVSCARKARLLLFQFSQHLELWRLGSTDETGKDGEVLPLCRMPEHLVQFKSKGPEHIYCSCISPCGSWVSYSTASHFHLYRVQYEGDSVSIKKVPKVPKLLLPAYQLQFSSDSGSLFVASARGSVHVLQLLEPGGCKHLHTLRPPSGSPEAVYLLASSTDGHWLAAVGGDWAIHIYNLKCFKHHGTVPTYTCAVTALAIHPLTNNLVIAYSDQQLFEFSIPEKQYTAWSRMVQNFGLHKVWLERDSPITHITFNPKKPSHILLHDTYMFCVLDKSLPLPDNSALLMNQSTLKQLPETARQRQLHAFKICKKFQPLLFADLLDENCLVMVERPIMDIKTQLPLPIQQKKFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1377709..1377825,1378161..1378271,1378432..1378617,1378899..1378994,1379185..1379291,1379581..1379740,1379880..1380002,1380131..1380195,1380586..1380682,1380984..1381075,1381156..1381327,1381535..1381743,1381860..1381949,1382072..1382156,1382268..1382459,1382530..1382688))
location: region:1377709-1382688:-1
so has part: feature:1382530-1382688:-1:exon
so has part: feature:1382268-1382459:-1:exon
so has part: feature:1382072-1382156:-1:exon
so has part: feature:1381860-1381949:-1:exon
so has part: feature:1381535-1381743:-1:exon
so has part: feature:1381156-1381327:-1:exon
so has part: feature:1380984-1381075:-1:exon
so has part: feature:1380586-1380682:-1:exon
so has part: feature:1380131-1380195:-1:exon
so has part: feature:1379880-1380002:-1:exon
so has part: feature:1379581-1379740:-1:exon
so has part: feature:1379185-1379291:-1:exon
so has part: feature:1378899-1378994:-1:exon
so has part: feature:1378432-1378617:-1:exon
so has part: feature:1378161-1378271:-1:exon
so has part: feature:1377709-1377825:-1:exon

XP_040471532.1
type: Protein
SIO_000068: ncbiprotein

position:1377709:-1
position: 1377709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382688:-1
position: 1382688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382530-1382688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382268-1382459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382072-1382156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381860-1381949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381535-1381743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1381156-1381327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1380984-1381075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380586-1380682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380131-1380195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1379880-1380002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379581-1379740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1379185-1379291:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378899-1378994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378432-1378617:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1378161-1378271:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1377709-1377825:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1382777..1384574
location: region:1382777-1384574:1
so has part: feature:1382777-1384574:1:exon
subclass of: SO_0000010

121098109
type: Gene
SIO_000068: ncbigene

position:1382777:1
position: 1382777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384574:1
position: 1384574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382777-1384574:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CHTF8
product: chromosome transmission fidelity factor 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_040615755.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1382777..1382848,1383270..1383302,1383429..1383546,1383625..1384574)
location: region:1382777-1384574:1
so has part: feature:1382777-1382848:1:exon
so has part: feature:1383270-1383302:1:exon
so has part: feature:1383429-1383546:1:exon
so has part: feature:1383625-1384574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382777-1382848:1:exon

position:1382848:1
position: 1382848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383270-1383302:1:exon

position:1383270:1
position: 1383270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383302:1
position: 1383302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383429-1383546:1:exon

position:1383429:1
position: 1383429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383546:1
position: 1383546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1383625-1384574:1:exon

position:1383625:1
position: 1383625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: CHTF8
product: chromosome transmission fidelity factor 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_040615756.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1382780..1382842,1383270..1383302,1383429..1383546,1383625..1384574)
location: region:1382780-1384574:1
so has part: feature:1382780-1382842:1:exon
so has part: feature:1383270-1383302:1:exon
so has part: feature:1383429-1383546:1:exon
so has part: feature:1383625-1384574:1:exon

position:1382780:1
position: 1382780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382780-1382842:1:exon

position:1382842:1
position: 1382842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383270-1383302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383429-1383546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383625-1384574:1:exon

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQIVISSAGAGGLAQWVLVELQGEVEPRQSGGLAGSLLGDLHYTCEGVPVLIVGHHILYGKVVQLEKPFAVLVKQGAGEPSPVGPHTRYTVTALIKTKLLFKTRPKPIITNVPKKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1383280..1383302,1383429..1383546,1383625..1383837)
location: region:1383280-1383837:1
so has part: feature:1383280-1383302:1:exon
so has part: feature:1383429-1383546:1:exon
so has part: feature:1383625-1383837:1:exon

XP_040471689.1
type: Protein
SIO_000068: ncbiprotein

position:1383280:1
position: 1383280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383837:1
position: 1383837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383280-1383302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383429-1383546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383625-1383837:1:exon

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQIVISSAGAGGLAQWVLVELQGEVEPRQSGGLAGSLLGDLHYTCEGVPVLIVGHHILYGKVVQLEKPFAVLVKQGAGEPSPVGPHTRYTVTALIKTKLLFKTRPKPIITNVPKKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1383280..1383302,1383429..1383546,1383625..1383837)
location: region:1383280-1383837:1
so has part: feature:1383280-1383302:1:exon
so has part: feature:1383429-1383546:1:exon
so has part: feature:1383625-1383837:1:exon

XP_040471690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383280-1383302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383429-1383546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383625-1383837:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1385468..1387798)
location: region:1385468-1387798:-1
so has part: feature:1385468-1387798:-1:exon
subclass of: SO_0000010

121097872
type: Gene
SIO_000068: ncbigene

position:1385468:-1
position: 1385468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387798:-1
position: 1387798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385468-1387798:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040615270.1
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1385468..1386401,1386497..1386598,1387178..1387798))
location: region:1385468-1387798:-1
so has part: feature:1387178-1387798:-1:exon
so has part: feature:1386497-1386598:-1:exon
so has part: feature:1385468-1386401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1387178-1387798:-1:exon

position:1387178:-1
position: 1387178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386497-1386598:-1:exon

position:1386497:-1
position: 1386497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386598:-1
position: 1386598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1385468-1386401:-1:exon

position:1386401:-1
position: 1386401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPVSLSTALRVVGTSLFALVVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGQPVQLGRSVALCIAAYQEDPNYLKKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHDVMGSEHSGSYVWRSNFHAWGEGETEAGMREGLARVQALVRGTTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPRVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNTLLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYQTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLVGIIKATYACFLRGNAEMIFMSLYALLYMSSLLPAKMFAIATINKSGWGTSGRRTIVVNFVGLLPVSVWVAVLLGGLAYTAYSQDLFSETEVAFLVSGAILYACYWVALLTLYLAIVARRCGKRQEQCGLAFAEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1385478..1386401,1386497..1386598,1387178..1387798))
location: region:1385478-1387798:-1
so has part: feature:1387178-1387798:-1:exon
so has part: feature:1386497-1386598:-1:exon
so has part: feature:1385478-1386401:-1:exon

XP_040471204.1
type: Protein
SIO_000068: ncbiprotein

position:1385478:-1
position: 1385478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387178-1387798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386497-1386598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1385478-1386401:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1391646..1418208)
location: region:1391646-1418208:-1
so has part: feature:1391646-1418208:-1:exon
subclass of: SO_0000010

121097871
type: Gene
SIO_000068: ncbigene

position:1391646:-1
position: 1391646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418208:-1
position: 1418208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391646-1418208:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_040615264.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1391646..1392044,1392772..1392885,1394067..1394218,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1391646-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394067-1394218:-1:exon
so has part: feature:1392772-1392885:-1:exon
so has part: feature:1391646-1392044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

position:1417490:-1
position: 1417490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

position:1417128:-1
position: 1417128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417244:-1
position: 1417244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

position:1415481:-1
position: 1415481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415631:-1
position: 1415631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

position:1414559:-1
position: 1414559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414686:-1
position: 1414686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

position:1413876:-1
position: 1413876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414038:-1
position: 1414038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

position:1413230:-1
position: 1413230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413312:-1
position: 1413312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

position:1409438:-1
position: 1409438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409550:-1
position: 1409550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

position:1407840:-1
position: 1407840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408016:-1
position: 1408016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

position:1406464:-1
position: 1406464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406590:-1
position: 1406590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

position:1405428:-1
position: 1405428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405607:-1
position: 1405607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

position:1401694:-1
position: 1401694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401828:-1
position: 1401828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

position:1399760:-1
position: 1399760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400269:-1
position: 1400269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

position:1399507:-1
position: 1399507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399564:-1
position: 1399564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

position:1396925:-1
position: 1396925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397077:-1
position: 1397077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1394067-1394218:-1:exon

position:1394067:-1
position: 1394067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394218:-1
position: 1394218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1392772-1392885:-1:exon

position:1392772:-1
position: 1392772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392885:-1
position: 1392885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1391646-1392044:-1:exon

position:1392044:-1
position: 1392044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X3
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLARYRCPAQGTEDTMAAVTRMKLGEVLMRVIQALGDMVFKHREPLIQAFLQGTRDADSTLRASSLSNLGELCQRLGFQLGSVLQEVTSCLTAIAKTDPKAEVRRAAVHVVVVLLRGLSEKATEVLRDVLRDLYRLLKHVVVAEPDGATVLHAQLALEELDAVMRRVLFPAQTLEKKIMVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1391868..1392044,1392772..1392885,1394067..1394218,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1391868-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394067-1394218:-1:exon
so has part: feature:1392772-1392885:-1:exon
so has part: feature:1391868-1392044:-1:exon

XP_040471198.1
type: Protein
SIO_000068: ncbiprotein

position:1391868:-1
position: 1391868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418176:-1
position: 1418176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394067-1394218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1392772-1392885:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391868-1392044:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040615265.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1392075..1392580,1392772..1392885,1394067..1394218,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1392075-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394067-1394218:-1:exon
so has part: feature:1392772-1392885:-1:exon
so has part: feature:1392075-1392580:-1:exon

position:1392075:-1
position: 1392075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394067-1394218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1392772-1392885:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1392075-1392580:-1:exon

position:1392580:-1
position: 1392580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X4
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLARYRCPAQGTEDTMAAVTRMKLGEVLMRVIQALGDMVFKHREPLIQAFLQGTRDADSTLRASSLSNLGELCQRLGFQLGSVLQEVTSCLTAIAKTDPKAEVRRAAVHVVVVLLRGLSEKATEGPLSAGSFPGQRALHRDILLSCLAVPWGSASCREL
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1392473..1392580,1392772..1392885,1394067..1394218,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1392473-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394067-1394218:-1:exon
so has part: feature:1392772-1392885:-1:exon
so has part: feature:1392473-1392580:-1:exon

XP_040471199.1
type: Protein
SIO_000068: ncbiprotein

position:1392473:-1
position: 1392473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394067-1394218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1392772-1392885:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1392473-1392580:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_040615266.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1394105..1394218,1396925..1397077,1399487..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1394105-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399487-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394105-1394218:-1:exon

position:1394105:-1
position: 1394105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399487-1399564:-1:exon

position:1399487:-1
position: 1399487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394105-1394218:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040615263.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1394818..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414683,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1394818-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414683:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394818-1396555:-1:exon

position:1394818:-1
position: 1394818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414683:-1:exon

position:1414683:-1
position: 1414683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394818-1396555:-1:exon

position:1396555:-1
position: 1396555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005831105.1
SIO_010081: TANGO6
so part of: TANGO6
location: complement(join(1394818..1394902,1395050..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1394818-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1395050-1396555:-1:exon
so has part: feature:1394818-1394902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1395050-1396555:-1:exon

position:1395050:-1
position: 1395050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1394818-1394902:-1:exon

position:1394902:-1
position: 1394902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040615262.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1394818..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1394818-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394818-1396555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394818-1396555:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615269.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1394818..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1418086..1418173))
location: region:1394818-1418173:-1
so has part: feature:1418086-1418173:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1394818-1396555:-1:exon

position:1418173:-1
position: 1418173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418086-1418173:-1:exon

position:1418086:-1
position: 1418086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394818-1396555:-1:exon

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X2
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLARYRCPAQGTEDTMAAVTRMKLGEVLMRVIQALAEARPVGACSQSSPRRGKAAADVPAAGAAARGSLVTGWVLCSPASRGRADLLLQSPGHPALGLPWGLCHMLATQLAGALLRGTATTVTSPWHGGTPELDWHPTEASAPWARLCHSAAGMGTGHPTGQQSHRLPVSSSKWCEQWQSLLVSEGPWVMSVRPALALLGAAAAPRWGSLGSCPRRGWQWDGGHGLRCSSPRSPWCLCRRQQLWHVPARLHIYRINRMKLFLLQSFRI
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1395855..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414683,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1395855-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414683:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1395855-1396555:-1:exon

XP_040471197.1
type: Protein
SIO_000068: ncbiprotein

position:1395855:-1
position: 1395855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1395855-1396555:-1:exon

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X1
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLARYRCPAQGTEDTMAAVTRMKLGEVLMRVIQALAEARPVGACSQSSPRRGKAAADVPAAGAAARGSLVTGWVLCSPASRGRADLLLQSPGHPALGLPWGLCHMLATQLAGALLRGTATTVTSPWHGGTPELDWHPTEASAPWARLCHSAAGMGTGHPTGQQSHRLPVSSSKWCEQWQSLLVSEGPWVMSVRPALALLGAAAAPRWGSLGSCPRRGWQWDGGHGLRCSSPRSPWCLCRRQQLWHVPARLHIYRINRMKLFLLQSFRI
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1395855..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1395855-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1395855-1396555:-1:exon

XP_040471196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1395855-1396555:-1:exon

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X6
translation: MRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLARYRCPAQGTEDTMAAVTRMKLGEVLMRVIQALAEARPVGACSQSSPRRGKAAADVPAAGAAARGSLVTGWVLCSPASRGRADLLLQSPGHPALGLPWGLCHMLATQLAGALLRGTATTVTSPWHGGTPELDWHPTEASAPWARLCHSAAGMGTGHPTGQQSHRLPVSSSKWCEQWQSLLVSEGPWVMSVRPALALLGAAAAPRWGSLGSCPRRGWQWDGGHGLRCSSPRSPWCLCRRQQLWHVPARLHIYRINRMKLFLLQSFRI
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1395855..1396555,1396925..1397077,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415535))
location: region:1395855-1415535:-1
so has part: feature:1415481-1415535:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1395855-1396555:-1:exon

XP_040471203.1
type: Protein
SIO_000068: ncbiprotein

position:1415535:-1
position: 1415535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415481-1415535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1395855-1396555:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040615267.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1396467..1396555,1396925..1397077,1399487..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1396467-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399487-1399564:-1:exon
so has part: feature:1396925-1397077:-1:exon
so has part: feature:1396467-1396555:-1:exon

position:1396467:-1
position: 1396467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399487-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396925-1397077:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396467-1396555:-1:exon

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X5
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGEQCLAEALPCSPASTRNGSCLSCWHGTGARRRARRTPWLPSPG
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1396964..1397077,1399487..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1396964-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399487-1399564:-1:exon
so has part: feature:1396964-1397077:-1:exon

XP_040471200.1
type: Protein
SIO_000068: ncbiprotein

position:1396964:-1
position: 1396964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399487-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396964-1397077:-1:exon

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X5
translation: MAGGAGPETGTELERVVEALELLLRPPAGPGERDGAAGPGPELRPETLRSNAAALAERLRREPGWAALRGLRDAVLARSPALAAGAAAEAEPGWAVACGLLALLLCLRERLAALAAVPAARGPGPGAAPPPSADTLSVAQGRSVARALRAAVGLGLLPYLPPGVGQRPGPPASPSVLPAICGARLLTATTALTEVARHPALGSPLLARHLGLLLASLCLLGHGPTAHSQSVPEAERAWCREALRDILDRVYQPLAVRELLVLQGRPKQSPLSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQSVVRGIMEGTGAGGAGAEAAAVDWRKCDMVAKILASCPQQCLSLEDYYRLVCPQILDLLHIQDKLTARQFQRVATTTLLTMVKEHPQLAQKYLLQPLLAPLLRCSETAELAVEDLSAGSVLVTEAELSSCVEDVLKVYVVGNDSSSLLLQSLQSVLGVVFSLYSFAKQNVSYLRSPCQEILLWFLEKSERDVSLSVLEGFAGLNSSVHVLHPRCRLCAGSEGGATIAVEETVSDEDEALYQKISSEQRHVEDLVELLSHCQKSGLAGDFFICCLKALTHVAAEDEATLNSDVEPGRSLLELEQYHAGQRRKLQVLQLVATLCESVSDTVFTDVAQVEAFVAATLQRACVSSARGPGAAAEAQTLAMAMGLVATMLGGAVQLQSSDFAVLKRLVPLLEELSRTYPDPLTQELAADLRIAICTHGAFSPATVGAAADGVLGKKPGMGMQSPAGIPGRPPGPGSGPTLPQHSRSSPSAPRERSEEQSMCHEPGAVGPAPAPCADSPAPAGLQEILVSAYDPQPPGRAAALRHLASLITQRDPEALQLQEKLLQVFLENLQHEDAFVYLSAIQGEQCLAEALPCSPASTRNGSCLSCWHGTGARRRARRTPWLPSPG
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1396964..1397077,1399487..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418176))
location: region:1396964-1418176:-1
so has part: feature:1417490-1418176:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399487-1399564:-1:exon
so has part: feature:1396964-1397077:-1:exon

XP_040471201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399487-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396964-1397077:-1:exon

TANGO6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005831107.1
SIO_010081: TANGO6
so part of: TANGO6
location: complement(join(1396991..1397077,1397954..1398319,1398422..1398969,1399125..1399242,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1396991-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1399125-1399242:-1:exon
so has part: feature:1398422-1398969:-1:exon
so has part: feature:1397954-1398319:-1:exon
so has part: feature:1396991-1397077:-1:exon

position:1396991:-1
position: 1396991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399125-1399242:-1:exon

position:1399125:-1
position: 1399125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399242:-1
position: 1399242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1398422-1398969:-1:exon

position:1398422:-1
position: 1398422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398969:-1
position: 1398969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1397954-1398319:-1:exon

position:1397954:-1
position: 1397954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398319:-1
position: 1398319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1396991-1397077:-1:exon

TANGO6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005831108.1
SIO_010081: TANGO6
so part of: TANGO6
location: complement(join(1396991..1397077,1397954..1398012,1398130..1398319,1398422..1399242,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1396991-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1398422-1399242:-1:exon
so has part: feature:1398130-1398319:-1:exon
so has part: feature:1397954-1398012:-1:exon
so has part: feature:1396991-1397077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398422-1399242:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398130-1398319:-1:exon

position:1398130:-1
position: 1398130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1397954-1398012:-1:exon

position:1398012:-1
position: 1398012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1396991-1397077:-1:exon

TANGO6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 148594
gene: TANGO6
product: transport and golgi organization 6 homolog, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005831106.1
SIO_010081: TANGO6
so part of: TANGO6
location: complement(join(1396991..1397077,1397954..1398319,1398422..1399242,1399507..1399564,1399760..1400269,1401694..1401828,1405428..1405607,1406464..1406590,1407840..1408016,1409438..1409550,1413230..1413312,1413876..1414038,1414559..1414686,1415481..1415631,1417128..1417244,1417490..1418208))
location: region:1396991-1418208:-1
so has part: feature:1417490-1418208:-1:exon
so has part: feature:1417128-1417244:-1:exon
so has part: feature:1415481-1415631:-1:exon
so has part: feature:1414559-1414686:-1:exon
so has part: feature:1413876-1414038:-1:exon
so has part: feature:1413230-1413312:-1:exon
so has part: feature:1409438-1409550:-1:exon
so has part: feature:1407840-1408016:-1:exon
so has part: feature:1406464-1406590:-1:exon
so has part: feature:1405428-1405607:-1:exon
so has part: feature:1401694-1401828:-1:exon
so has part: feature:1399760-1400269:-1:exon
so has part: feature:1399507-1399564:-1:exon
so has part: feature:1398422-1399242:-1:exon
so has part: feature:1397954-1398319:-1:exon
so has part: feature:1396991-1397077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417490-1418208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417128-1417244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415481-1415631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414559-1414686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413876-1414038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413230-1413312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409438-1409550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407840-1408016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406464-1406590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1405428-1405607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1401694-1401828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399760-1400269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399507-1399564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398422-1399242:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1397954-1398319:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1396991-1397077:-1:exon

LOC121097938
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1418350..1419430
location: region:1418350-1419430:1
so has part: feature:1418350-1419430:1:exon
subclass of: SO_0000011

121097938
type: Gene
SIO_000068: ncbigene

position:1418350:1
position: 1418350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419430:1
position: 1419430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418350-1419430:1:exon

LOC121097938
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 148594
nc RNA class: lncRNA
gene: LOC121097938
product: uncharacterized LOC121097938
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005831131.1
SIO_010081: LOC121097938
subclass of: SO_0000673
so part of: LOC121097938
location: join(1418350..1418593,1418976..1419078,1419183..1419430)
location: region:1418350-1419430:1
so has part: feature:1418350-1418593:1:exon
so has part: feature:1418976-1419078:1:exon
so has part: feature:1419183-1419430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1418350-1418593:1:exon

position:1418593:1
position: 1418593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1418976-1419078:1:exon

position:1418976:1
position: 1418976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419078:1
position: 1419078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419183-1419430:1:exon

position:1419183:1
position: 1419183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121097937
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1419449..1429109)
location: region:1419449-1429109:-1
so has part: feature:1419449-1429109:-1:exon
subclass of: SO_0000010

121097937
type: Gene
SIO_000068: ncbigene

position:1419449:-1
position: 1419449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429109:-1
position: 1429109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419449-1429109:-1:exon

LOC121097937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097937
product: cadherin-1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_040615376.1
SIO_010081: LOC121097937
subclass of: SO_0000673
so part of: LOC121097937
location: complement(join(1419449..1420516,1420670..1420813,1420958..1421088,1421171..1421392,1421641..1421865,1421979..1422121,1422227..1422471,1422557..1422742,1422866..1422994,1423387..1423559,1423691..1423835,1423907..1424062,1424145..1424276,1424385..1424605,1428739..1428853,1428933..1429109))
location: region:1419449-1429109:-1
so has part: feature:1428933-1429109:-1:exon
so has part: feature:1428739-1428853:-1:exon
so has part: feature:1424385-1424605:-1:exon
so has part: feature:1424145-1424276:-1:exon
so has part: feature:1423907-1424062:-1:exon
so has part: feature:1423691-1423835:-1:exon
so has part: feature:1423387-1423559:-1:exon
so has part: feature:1422866-1422994:-1:exon
so has part: feature:1422557-1422742:-1:exon
so has part: feature:1422227-1422471:-1:exon
so has part: feature:1421979-1422121:-1:exon
so has part: feature:1421641-1421865:-1:exon
so has part: feature:1421171-1421392:-1:exon
so has part: feature:1420958-1421088:-1:exon
so has part: feature:1420670-1420813:-1:exon
so has part: feature:1419449-1420516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428933-1429109:-1:exon

position:1428933:-1
position: 1428933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428739-1428853:-1:exon

position:1428739:-1
position: 1428739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428853:-1
position: 1428853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1424385-1424605:-1:exon

position:1424385:-1
position: 1424385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424605:-1
position: 1424605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1424145-1424276:-1:exon

position:1424145:-1
position: 1424145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424276:-1
position: 1424276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1423907-1424062:-1:exon

position:1423907:-1
position: 1423907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424062:-1
position: 1424062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1423691-1423835:-1:exon

position:1423691:-1
position: 1423691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423835:-1
position: 1423835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1423387-1423559:-1:exon

position:1423387:-1
position: 1423387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423559:-1
position: 1423559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1422866-1422994:-1:exon

position:1422866:-1
position: 1422866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422994:-1
position: 1422994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1422557-1422742:-1:exon

position:1422557:-1
position: 1422557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422742:-1
position: 1422742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1422227-1422471:-1:exon

position:1422227:-1
position: 1422227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422471:-1
position: 1422471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1421979-1422121:-1:exon

position:1421979:-1
position: 1421979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422121:-1
position: 1422121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1421641-1421865:-1:exon

position:1421641:-1
position: 1421641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421865:-1
position: 1421865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1421171-1421392:-1:exon

position:1421171:-1
position: 1421171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421392:-1
position: 1421392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1420958-1421088:-1:exon

position:1420958:-1
position: 1420958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421088:-1
position: 1421088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1420670-1420813:-1:exon

position:1420670:-1
position: 1420670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420813:-1
position: 1420813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1419449-1420516:-1:exon

position:1420516:-1
position: 1420516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121097937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097937
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-1-like
translation: MGRWGGCAAPLCLLLLLLQADHRLCEQFVPCQPGFTAETFNLTVPRDSVVAGQVLGRVSFVNCGEQQRAMYLSDDTHFRVSRDGVISATRPLQLQRQEISFSVYAWDILGKKHSTRVTLRRWWHHRLHQHQDAAPDVLVFPKHHHGLQRQKRDWVIPPINCPENERGPFPKKLVQIKSNKDKETTVFYSITGQGADTPPVGVFTIERETGWLEVTKPLDREEIDKYVLFSHAVSANGQPVEDPMEIIITVTDQNDNRPMFTKQVFVGYIEENAKPGTSVMTVNATDADDGVNVNNGIINYSILSEEPKSAQRMFTIDPEKGIISVIGTGLDRETTPNYTLIIQAADQEGSGLTNTATAIVEVTDANDNPPIFNPTSYEGMVNENEVGVVVARLHVMDGDMQGSPAWQAVYRIKSGDQDGDFSITTDPKTNDGILKTAKGLDYETRSRYNLVVTVENAVPFTVPLPLSTASVLVLVGDVNEAPVFVPPVKRVEVMEDLPPGHQVTSYTAQDPDKDQRQKITYRMGSDPAGWLAIDPENGIVTAAQPLDRESMHAINSTYKAIVLAVDSGSPDATGTGTLLLLLQDVNDNGPMPEPRIFDICNRQPEEQTLNIVDKDLPPNTYPFQAGLEHGSGANWTVRVIEQDLLVLKLVKQLEPGEYSIFLKLTDGQGKVQVTPVKAQVCDCEGPAKNCERRAYIASGVGIPTILGILGGILALLILLLLLLLFARRRRVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMTAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDRDQDYDYLNDWGSRFRKLADLYGGGEDDD
SIO_010081: LOC121097937
subclass of: SO_0000673
so part of: LOC121097937
location: complement(join(1420303..1420516,1420670..1420813,1420958..1421088,1421171..1421392,1421641..1421865,1421979..1422121,1422227..1422471,1422557..1422742,1422866..1422994,1423387..1423559,1423691..1423835,1423907..1424062,1424145..1424276,1424385..1424605,1428739..1428853,1428933..1428989))
location: region:1420303-1428989:-1
so has part: feature:1428933-1428989:-1:exon
so has part: feature:1428739-1428853:-1:exon
so has part: feature:1424385-1424605:-1:exon
so has part: feature:1424145-1424276:-1:exon
so has part: feature:1423907-1424062:-1:exon
so has part: feature:1423691-1423835:-1:exon
so has part: feature:1423387-1423559:-1:exon
so has part: feature:1422866-1422994:-1:exon
so has part: feature:1422557-1422742:-1:exon
so has part: feature:1422227-1422471:-1:exon
so has part: feature:1421979-1422121:-1:exon
so has part: feature:1421641-1421865:-1:exon
so has part: feature:1421171-1421392:-1:exon
so has part: feature:1420958-1421088:-1:exon
so has part: feature:1420670-1420813:-1:exon
so has part: feature:1420303-1420516:-1:exon

XP_040471310.1
type: Protein
SIO_000068: ncbiprotein

position:1420303:-1
position: 1420303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428989:-1
position: 1428989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428933-1428989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428739-1428853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424385-1424605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1424145-1424276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423907-1424062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1423691-1423835:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1423387-1423559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1422866-1422994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1422557-1422742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1422227-1422471:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1421979-1422121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1421641-1421865:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1421171-1421392:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1420958-1421088:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1420670-1420813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1420303-1420516:-1:exon

LOC121097957
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1430095..1435442)
location: region:1430095-1435442:-1
so has part: feature:1430095-1435442:-1:exon
subclass of: SO_0000010

121097957
type: Gene
SIO_000068: ncbigene

position:1430095:-1
position: 1430095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435442:-1
position: 1435442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430095-1435442:-1:exon

LOC121097957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097957
product: B-cadherin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615425.1
SIO_010081: LOC121097957
subclass of: SO_0000673
so part of: LOC121097957
location: complement(join(1430095..1430512,1430634..1430780,1430869..1430999,1431104..1431322,1431423..1431647,1431847..1431989,1432074..1432318,1432401..1432586,1432673..1432801,1432879..1433054,1433195..1433339,1433422..1433577,1433727..1433837,1433916..1434079,1435298..1435442))
location: region:1430095-1435442:-1
so has part: feature:1435298-1435442:-1:exon
so has part: feature:1433916-1434079:-1:exon
so has part: feature:1433727-1433837:-1:exon
so has part: feature:1433422-1433577:-1:exon
so has part: feature:1433195-1433339:-1:exon
so has part: feature:1432879-1433054:-1:exon
so has part: feature:1432673-1432801:-1:exon
so has part: feature:1432401-1432586:-1:exon
so has part: feature:1432074-1432318:-1:exon
so has part: feature:1431847-1431989:-1:exon
so has part: feature:1431423-1431647:-1:exon
so has part: feature:1431104-1431322:-1:exon
so has part: feature:1430869-1430999:-1:exon
so has part: feature:1430634-1430780:-1:exon
so has part: feature:1430095-1430512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1435298-1435442:-1:exon

position:1435298:-1
position: 1435298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1433916-1434079:-1:exon

position:1433916:-1
position: 1433916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434079:-1
position: 1434079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1433727-1433837:-1:exon

position:1433727:-1
position: 1433727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433837:-1
position: 1433837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1433422-1433577:-1:exon

position:1433422:-1
position: 1433422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433577:-1
position: 1433577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1433195-1433339:-1:exon

position:1433195:-1
position: 1433195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433339:-1
position: 1433339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1432879-1433054:-1:exon

position:1432879:-1
position: 1432879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433054:-1
position: 1433054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1432673-1432801:-1:exon

position:1432673:-1
position: 1432673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432801:-1
position: 1432801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1432401-1432586:-1:exon

position:1432401:-1
position: 1432401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432586:-1
position: 1432586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1432074-1432318:-1:exon

position:1432074:-1
position: 1432074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432318:-1
position: 1432318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1431847-1431989:-1:exon

position:1431847:-1
position: 1431847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431989:-1
position: 1431989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1431423-1431647:-1:exon

position:1431423:-1
position: 1431423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431647:-1
position: 1431647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1431104-1431322:-1:exon

position:1431104:-1
position: 1431104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431322:-1
position: 1431322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1430869-1430999:-1:exon

position:1430869:-1
position: 1430869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430999:-1
position: 1430999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1430634-1430780:-1:exon

position:1430634:-1
position: 1430634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430780:-1
position: 1430780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1430095-1430512:-1:exon

position:1430512:-1
position: 1430512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121097957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cadherin
translation: MRGPRSGLCPLFILIILLLLLPLLPAAAAPPARTCVPRGLRRGPLPAPASPSGTEEPDVDVGVQKDGGPAPPGVARVLAVPPRGAAGWPDPAPLLARSRRSPQELRGARAAPRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTIEKESGWMKVTQPLDRERIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEIFRGSVPEGALPGTSVMQVTATDADDAVETYNGVIAYSILSQEPREPHPHMFTVNRATGALSVIASGLDRERVREYTLTVQAADLDGDGLTTTALAVIEIADINDNAPEFDPKTYEAAVPENEAGREVARLAATDLDEPNTPAWRAIYSILRGNEGGVFTITTDPASNEGVLRTIKGLNYEAKKQFVLHVVVANEAPFAVKLPTATATVTVNVEDVNEAPVFDPLVQLAQVPEDVPPGQTLASCMAQDPDKGQGQRIKYLVGHDPAGWLTVHPENGLVMARDHLDRESPFTKNSTYTAILLAVDDGLPPATGTGTLLLTLLDVNDHGPEAEPRDITVCNRSPQPQVLTITDRDLPPNTSPFRAELTHGSGDSWAAEVGGEGDTVTLRLVAPLEPDLYSVYLRLLDRPGKAQLTVITARVCDCEGPTQSCPQRSQPATGLPFVLAALGALLALLLMLLLLLLFMRRRKVTKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLRQLHRGLDARPEVLLRNDVAPTLLPAPQYRPRPANPDDIGTFIEENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDRDQDYDYLNDWGSRFRKLADLYGGGEDDD
SIO_010081: LOC121097957
subclass of: SO_0000673
so part of: LOC121097957
location: complement(join(1430300..1430512,1430634..1430780,1430869..1430999,1431104..1431322,1431423..1431647,1431847..1431989,1432074..1432318,1432401..1432586,1432673..1432801,1432879..1433054,1433195..1433339,1433422..1433577,1433727..1433837,1433916..1434079,1435298..1435442))
location: region:1430300-1435442:-1
so has part: feature:1435298-1435442:-1:exon
so has part: feature:1433916-1434079:-1:exon
so has part: feature:1433727-1433837:-1:exon
so has part: feature:1433422-1433577:-1:exon
so has part: feature:1433195-1433339:-1:exon
so has part: feature:1432879-1433054:-1:exon
so has part: feature:1432673-1432801:-1:exon
so has part: feature:1432401-1432586:-1:exon
so has part: feature:1432074-1432318:-1:exon
so has part: feature:1431847-1431989:-1:exon
so has part: feature:1431423-1431647:-1:exon
so has part: feature:1431104-1431322:-1:exon
so has part: feature:1430869-1430999:-1:exon
so has part: feature:1430634-1430780:-1:exon
so has part: feature:1430300-1430512:-1:exon

XP_040471359.1
type: Protein
SIO_000068: ncbiprotein

position:1430300:-1
position: 1430300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435298-1435442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1433916-1434079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1433727-1433837:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433422-1433577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1433195-1433339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432879-1433054:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1432673-1432801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1432401-1432586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432074-1432318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431847-1431989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431423-1431647:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1431104-1431322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430869-1430999:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430634-1430780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1430300-1430512:-1:exon

LOC121097959
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1435421..1439290
location: region:1435421-1439290:1
so has part: feature:1435421-1439290:1:exon
subclass of: SO_0000010

121097959
type: Gene
SIO_000068: ncbigene

position:1435421:1
position: 1435421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439290:1
position: 1439290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435421-1439290:1:exon

LOC121097959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097959
product: 5-hydroxyisourate hydrolase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615431.1
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1435421..1435542,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439290)
location: region:1435421-1439290:1
so has part: feature:1435421-1435542:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1435421-1435542:1:exon

position:1435542:1
position: 1435542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436268-1436387:1:exon

position:1436268:1
position: 1436268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436387:1
position: 1436387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1436470-1436625:1:exon

position:1436470:1
position: 1436470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436625:1
position: 1436625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1436698-1436842:1:exon

position:1436698:1
position: 1436698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436842:1
position: 1436842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1436919-1437094:1:exon

position:1436919:1
position: 1436919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437094:1
position: 1437094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1437165-1437254:1:exon

position:1437165:1
position: 1437165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437254:1
position: 1437254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1438526-1438668:1:exon

position:1438526:1
position: 1438526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438668:1
position: 1438668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1438798-1438933:1:exon

position:1438798:1
position: 1438798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438933:1
position: 1438933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1439132-1439290:1:exon

position:1439132:1
position: 1439132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121097959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1-like isoform X4
translation: MARPLPPLVTAPPRRAPPRPAPPAAAAAAARWFQDMLVFPEHGHGLQRQKRDWVIPPINCPENERGPFPKKLVQIKSNKNKETTVFYSITGQGADTPPVGVFTVERETGWLEVTKPLDREEIDKYILFSHAVSANGQPVEDPMEIIITVTDQNDNRPIFTQAVFNGTVLEGAEPGTHVLQVLATDQDDMVNSNNGIVFYSILRQTPGWPQPHMFAINPSTGAIFVTAAGLVAQVVPEYTLEVQAADMDGYGLQATATVLIKVQAKDPPEMANGPLTTHVLNTATGLPAAGLAIRLSQLQEPGQQWTELVQRWTDADGRCLPLLAVGQAKAGTYKLRFETAAYWQGLGHASFYPFVEVVFTITDASQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1435441..1435542,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439221)
location: region:1435441-1439221:1
so has part: feature:1435441-1435542:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439221:1:exon

XP_040471365.1
type: Protein
SIO_000068: ncbiprotein

position:1435441:1
position: 1435441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439221:1
position: 1439221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435441-1435542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436268-1436387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1436470-1436625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436698-1436842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436919-1437094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437165-1437254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439132-1439221:1:exon

LOC121097959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097959
product: 5-hydroxyisourate hydrolase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615429.1
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1435513..1435542,1436028..1436131,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439290)
location: region:1435513-1439290:1
so has part: feature:1435513-1435542:1:exon
so has part: feature:1436028-1436131:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439290:1:exon

position:1435513:1
position: 1435513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435513-1435542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436028-1436131:1:exon

position:1436028:1
position: 1436028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436131:1
position: 1436131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1436268-1436387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436470-1436625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436698-1436842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1436919-1437094:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437165-1437254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1439132-1439290:1:exon

LOC121097959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097959
product: 5-hydroxyisourate hydrolase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040615428.1
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1435835..1436131,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439290)
location: region:1435835-1439290:1
so has part: feature:1435835-1436131:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439290:1:exon

position:1435835:1
position: 1435835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435835-1436131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436268-1436387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1436470-1436625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436698-1436842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436919-1437094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437165-1437254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439132-1439290:1:exon

LOC121097959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1-like isoform X1
translation: MGLLRGAWSPPPPPLGVLGTCVGPPGSPSVLALPAGPPPAHLPLPAGLGQGHSQRSQLAPRGAVSAAGAMSPCTFSLLLLLDMLVFPEHGHGLQRQKRDWVIPPINCPENERGPFPKKLVQIKSNKNKETTVFYSITGQGADTPPVGVFTVERETGWLEVTKPLDREEIDKYILFSHAVSANGQPVEDPMEIIITVTDQNDNRPIFTQAVFNGTVLEGAEPGTHVLQVLATDQDDMVNSNNGIVFYSILRQTPGWPQPHMFAINPSTGAIFVTAAGLVAQVVPEYTLEVQAADMDGYGLQATATVLIKVQAKDPPEMANGPLTTHVLNTATGLPAAGLAIRLSQLQEPGQQWTELVQRWTDADGRCLPLLAVGQAKAGTYKLRFETAAYWQGLGHASFYPFVEVVFTITDASQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1435889..1436131,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439221)
location: region:1435889-1439221:1
so has part: feature:1435889-1436131:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439221:1:exon

XP_040471362.1
type: Protein
SIO_000068: ncbiprotein

position:1435889:1
position: 1435889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435889-1436131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436268-1436387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1436470-1436625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436698-1436842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436919-1437094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437165-1437254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439132-1439221:1:exon

LOC121097959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1-like isoform X2
translation: MSPCTFSLLLLLDMLVFPEHGHGLQRQKRDWVIPPINCPENERGPFPKKLVQIKSNKNKETTVFYSITGQGADTPPVGVFTVERETGWLEVTKPLDREEIDKYILFSHAVSANGQPVEDPMEIIITVTDQNDNRPIFTQAVFNGTVLEGAEPGTHVLQVLATDQDDMVNSNNGIVFYSILRQTPGWPQPHMFAINPSTGAIFVTAAGLVAQVVPEYTLEVQAADMDGYGLQATATVLIKVQAKDPPEMANGPLTTHVLNTATGLPAAGLAIRLSQLQEPGQQWTELVQRWTDADGRCLPLLAVGQAKAGTYKLRFETAAYWQGLGHASFYPFVEVVFTITDASQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1436096..1436131,1436268..1436387,1436470..1436625,1436698..1436842,1436919..1437094,1437165..1437254,1438526..1438668,1438798..1438933,1439132..1439221)
location: region:1436096-1439221:1
so has part: feature:1436096-1436131:1:exon
so has part: feature:1436268-1436387:1:exon
so has part: feature:1436470-1436625:1:exon
so has part: feature:1436698-1436842:1:exon
so has part: feature:1436919-1437094:1:exon
so has part: feature:1437165-1437254:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439221:1:exon

XP_040471363.1
type: Protein
SIO_000068: ncbiprotein

position:1436096:1
position: 1436096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436096-1436131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436268-1436387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1436470-1436625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436698-1436842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436919-1437094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437165-1437254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439132-1439221:1:exon

LOC121097959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097959
product: 5-hydroxyisourate hydrolase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_040615430.1
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1437294..1437744,1438526..1438668,1438798..1438933,1439132..1439290)
location: region:1437294-1439290:1
so has part: feature:1437294-1437744:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439290:1:exon

position:1437294:1
position: 1437294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437294-1437744:1:exon

position:1437744:1
position: 1437744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439132-1439290:1:exon

LOC121097959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transthyretin-like isoform X3
translation: MAALPWLLLARCPDVPLGSGPPTPGPRCCWSVGAGMALGHTSQGEATCAGSAQPGRSARCCCGLCRDSGIQPHQLPGERLRRWEGWPVQGMAFCTVSPAVGSWSGRTEGSQAKDPPEMANGPLTTHVLNTATGLPAAGLAIRLSQLQEPGQQWTELVQRWTDADGRCLPLLAVGQAKAGTYKLRFETAAYWQGLGHASFYPFVEVVFTITDASQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1437412..1437744,1438526..1438668,1438798..1438933,1439132..1439221)
location: region:1437412-1439221:1
so has part: feature:1437412-1437744:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439221:1:exon

XP_040471364.1
type: Protein
SIO_000068: ncbiprotein

position:1437412:1
position: 1437412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437412-1437744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439132-1439221:1:exon

LOC121097959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: LOC121097959
product: 5-hydroxyisourate hydrolase-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040615432.1
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1437835..1438201,1438526..1438668,1438798..1438933,1439132..1439290)
location: region:1437835-1439290:1
so has part: feature:1437835-1438201:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439290:1:exon

position:1437835:1
position: 1437835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437835-1438201:1:exon

position:1438201:1
position: 1438201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439132-1439290:1:exon

LOC121097959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: LOC121097959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxyisourate hydrolase-like isoform X5
translation: MQHPPVLAATWQAKDPPEMANGPLTTHVLNTATGLPAAGLAIRLSQLQEPGQQWTELVQRWTDADGRCLPLLAVGQAKAGTYKLRFETAAYWQGLGHASFYPFVEVVFTITDASQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121097959
subclass of: SO_0000673
so part of: LOC121097959
location: join(1438166..1438201,1438526..1438668,1438798..1438933,1439132..1439221)
location: region:1438166-1439221:1
so has part: feature:1438166-1438201:1:exon
so has part: feature:1438526-1438668:1:exon
so has part: feature:1438798-1438933:1:exon
so has part: feature:1439132-1439221:1:exon

XP_040471366.1
type: Protein
SIO_000068: ncbiprotein

position:1438166:1
position: 1438166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438166-1438201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438526-1438668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438798-1438933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439132-1439221:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 148594
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1439283..1447835)
location: region:1439283-1447835:-1
so has part: feature:1439283-1447835:-1:exon
subclass of: SO_0000010

121097958
type: Gene
SIO_000068: ncbigene

position:1439283:-1
position: 1439283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447835:-1
position: 1447835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439283-1447835:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GAS8
product: growth arrest specific 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040615426.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1439283..1439873,1440163..1440228,1441468..1441677,1442704..1442790,1443121..1443288,1443568..1443773,1444427..1444481,1444883..1445089,1445286..1445483,1446955..1447107,1447664..1447835))
location: region:1439283-1447835:-1
so has part: feature:1447664-1447835:-1:exon
so has part: feature:1446955-1447107:-1:exon
so has part: feature:1445286-1445483:-1:exon
so has part: feature:1444883-1445089:-1:exon
so has part: feature:1444427-1444481:-1:exon
so has part: feature:1443568-1443773:-1:exon
so has part: feature:1443121-1443288:-1:exon
so has part: feature:1442704-1442790:-1:exon
so has part: feature:1441468-1441677:-1:exon
so has part: feature:1440163-1440228:-1:exon
so has part: feature:1439283-1439873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1447664-1447835:-1:exon

position:1447664:-1
position: 1447664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1446955-1447107:-1:exon

position:1446955:-1
position: 1446955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447107:-1
position: 1447107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445286-1445483:-1:exon

position:1445286:-1
position: 1445286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445483:-1
position: 1445483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1444883-1445089:-1:exon

position:1444883:-1
position: 1444883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445089:-1
position: 1445089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1444427-1444481:-1:exon

position:1444427:-1
position: 1444427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444481:-1
position: 1444481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1443568-1443773:-1:exon

position:1443568:-1
position: 1443568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443773:-1
position: 1443773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1443121-1443288:-1:exon

position:1443121:-1
position: 1443121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443288:-1
position: 1443288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1442704-1442790:-1:exon

position:1442704:-1
position: 1442704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442790:-1
position: 1442790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1441468-1441677:-1:exon

position:1441468:-1
position: 1441468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441677:-1
position: 1441677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1440163-1440228:-1:exon

position:1440163:-1
position: 1440163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440228:-1
position: 1440228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1439283-1439873:-1:exon

position:1439873:-1
position: 1439873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 148594
gene: GAS8
product: growth arrest specific 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040615427.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1439283..1439873,1440163..1440228,1441468..1441677,1442704..1442790,1443121..1443288,1443568..1443773,1444883..1444946))
location: region:1439283-1444946:-1
so has part: feature:1444883-1444946:-1:exon
so has part: feature:1443568-1443773:-1:exon
so has part: feature:1443121-1443288:-1:exon
so has part: feature:1442704-1442790:-1:exon
so has part: feature:1441468-1441677:-1:exon
so has part: feature:1440163-1440228:-1:exon
so has part: feature:1439283-1439873:-1:exon

position:1444946:-1
position: 1444946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444883-1444946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443568-1443773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443121-1443288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442704-1442790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441468-1441677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440163-1440228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1439283-1439873:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X1
translation: MAPKKKAEKKTEKKTEKKTEKKTEKKTEKKVKGSKAPAVVDGLSPVEMSKEQLQKHVVRLREELDREREERNYYQLERDKIHTFWEITRRQLEEKRAELRNKDREMEEAEERHQAEIKVYKQKVKHLLYEHQENLTEVKVERTLSIKQAQNDHWAQEIELRKGMGSLRVELKEQERAHEAVVKNLCLKQKEEITQLCNDFEGQLKEIEAKYTKKMQMLRDELELQRKTEIHNMEERKNNHISELMRNHEKAFSDIKNYYSDITTKNLAFINLLQEQMEEVKKRENHLAKENTNILLQNNKQKESLQQVQEQVSELRKKLAHYDKDKAALMNTKALLKVTQKELKDLRWEHEVLEQRFVKVQAERDELYQKFTKAINEVQQKTGFKNLLLERKLKGLLSVLEKKEAELSEVLAASNLDPSAISLVSHKLEDMLNSKNSTIKDLQFQLARACKAHNDMLQTFEAKLTAFGIPLDNLGFKPLVNPVPGQVLGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1439724..1439873,1440163..1440228,1441468..1441677,1442704..1442790,1443121..1443288,1443568..1443773,1444427..1444481,1444883..1445089,1445286..1445483,1446955..1447107,1447664..1447666))
location: region:1439724-1447666:-1
so has part: feature:1447664-1447666:-1:exon
so has part: feature:1446955-1447107:-1:exon
so has part: feature:1445286-1445483:-1:exon
so has part: feature:1444883-1445089:-1:exon
so has part: feature:1444427-1444481:-1:exon
so has part: feature:1443568-1443773:-1:exon
so has part: feature:1443121-1443288:-1:exon
so has part: feature:1442704-1442790:-1:exon
so has part: feature:1441468-1441677:-1:exon
so has part: feature:1440163-1440228:-1:exon
so has part: feature:1439724-1439873:-1:exon

XP_040471360.1
type: Protein
SIO_000068: ncbiprotein

position:1439724:-1
position: 1439724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447666:-1
position: 1447666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447664-1447666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1446955-1447107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445286-1445483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1444883-1445089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1444427-1444481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443568-1443773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1443121-1443288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442704-1442790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1441468-1441677:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1440163-1440228:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1439724-1439873:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 148594
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X2
translation: MQMLRDELELQRKTEIHNMEERKNNHISELMRNHEKAFSDIKNYYSDITTKNLAFINLLQEQMEEVKKRENHLAKENTNILLQNNKQKESLQQVQEQVSELRKKLAHYDKDKAALMNTKALLKVTQKELKDLRWEHEVLEQRFVKVQAERDELYQKFTKAINEVQQKTGFKNLLLERKLKGLLSVLEKKEAELSEVLAASNLDPSAISLVSHKLEDMLNSKNSTIKDLQFQLARACKAHNDMLQTFEAKLTAFGIPLDNLGFKPLVNPVPGQVLGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1439724..1439873,1440163..1440228,1441468..1441677,1442704..1442790,1443121..1443288,1443568..1443747))
location: region:1439724-1443747:-1
so has part: feature:1443568-1443747:-1:exon
so has part: feature:1443121-1443288:-1:exon
so has part: feature:1442704-1442790:-1:exon
so has part: feature:1441468-1441677:-1:exon
so has part: feature:1440163-1440228:-1:exon
so has part: feature:1439724-1439873:-1:exon

XP_040471361.1
type: Protein
SIO_000068: ncbiprotein

position:1443747:-1
position: 1443747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443568-1443747:-1:exon