Lichenicola cladoniae strain PAMC 26569 plasmid unnamed8, complete sequence.
type: Entry
definition: Lichenicola cladoniae strain PAMC 26569 plasmid unnamed8, complete sequence.
sequence version: NZ_CP053715.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NZ_CP053715.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14917828
keyword: RefSeq
source: Lichenicola cladoniae
organism: Lichenicola cladoniae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Lichenicola.
reference: 1
references: 25001073
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP053715.1.\nBacteria and source DNA available from PAMC, Korea Polar Research\nInstitute.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler assembler v. v0.4.8\nAssembly Name :: KOPRI_Lcla_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 516.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 06:14:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,687\nCDSs (total) :: 5,624\nGenes (coding) :: 5,398\nCDSs (with protein) :: 5,398\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 226\nCDSs (without protein) :: 226\nPseudo Genes (ambiguous residues) :: 0 of 226\nPseudo Genes (frameshifted) :: 81 of 226\nPseudo Genes (incomplete) :: 148 of 226\nPseudo Genes (internal stop) :: 71 of 226\nPseudo Genes (multiple problems) :: 63 of 226\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28800
topology: circular
so has quality: SO_0000988
location: 1..28800
location: region:1-28800:1
RO_0002162: 1484109

NZ_CP053715
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14917828
type: BioSample
SIO_000068: biosample

1
title: Biodiversity and physiological characteristics of Antarctic and Arctic lichens-associated bacteria
author: Lee, Y.M.
author: Kim, E.H.
author: Lee, H.K.
author: Hong, S.G.
journal: World J Microbiol Biotechnol
volume: 30
issue: 10
pages: 2711-2721
year: 2014
pubmed: 25001073

25001073
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Noh, H.-J.
author: Shin, S.C.
author: Park, Y.
author: Choi, A.
author: Baek, K.
author: Cho, Y.
author: Lee, Y.M.
journal: Submitted (19-MAY-2020) Division of Polar Life Sciences, Korea Polar Research institute, 26 Songdomirae-ro, Incheon 21990, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28800:1
position: 28800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28800:1:source
so part of: sequence
organism: Lichenicola cladoniae
mol type: genomic DNA
strain: PAMC 26569
isolation source: lichen
host: Cladonia borealis
culture collection: PAMC:26569
type material: type strain of Lichenicola cladoniae Noh et al. 2020
plasmid: unnamed8
country: Antarctica
collection date: 2010-02-06
collected by: Yung Mi Lee

1484109
type: Taxonomy
SIO_000068: taxonomy

HN018_RS28215
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28215
old locus tag: HN018_28230
so part of: sequence
location: 44..967
location: region:44-967:1
so has part: feature:44-967:1:exon
subclass of: SO_0000010

position:44:1
position: 44
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967:1
position: 967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44-967:1:exon

HN018_RS28215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28215
old locus tag: HN018_28230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019172904.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease NucS
translation: MSDLKLFRLSSTGVSELTGATVPLERSLQTLFERNLEGLLGVRFLASEYRTTNGRIDTLGVDENFCPVIIEYKRASNENVINQGLFYLDWLMDHRRDFAWLVMERYGKDEAAKVEWSAPRLICIAGDFTRYDEHAVKQISRNIELIRYRRFDDDLLLLDLVTTTASTVVARPDLAIEDAGVSSGVIPAKYKSVTEYLADADAGLTDLFESTRALLRAIGDDVQERTLKNYFAFTRLKNFACVEIKPTARKLLVYLKVDPASIDLQAGFTRDVSKIGHYGTGDLEVTLSKTEDVERAKLLFEQSYQAS
SIO_010081: HN018_RS28215
subclass of: SO_0000673
so part of: HN018_RS28215
location: 44..967
location: region:44-967:1
so has part: feature:44-967:1:exon

WP_171837334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44-967:1:exon

HN018_RS28220
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28220
old locus tag: HN018_28235
so part of: sequence
location: 1034..2002
location: region:1034-2002:1
so has part: feature:1034-2002:1:exon
subclass of: SO_0000010

position:1034:1
position: 1034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002:1
position: 2002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034-2002:1:exon

HN018_RS28220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28220
old locus tag: HN018_28235
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTEPPLVPIPSARLGQLVHLDVLAAIAEEDVWLASQKSARTRRAYKLDVAHFMKTLGITTPDQLRQVDHRAVIAWERIMREEQGAAHSTVRRRLSALSSLFKHLVRHGAASRNPVVDVARPNINREEGSTLAFSKAQARKLLDVPAEDTLAGLRDRAILSVGLQVGLRRAEIAALTVGDLHQNRGFDALRLTRKGGRRDALAIHPQAAQRIRAYLDRAGHTADHQGTLFRPLRGNSKPLDPGGRLDPDAIDRMVRKYAAAIDLPRGYSAHSMRATFITTALENGAQLEDVQKAAGHRDPSTTKLYDRRGYNPEKAASFFATY
SIO_010081: HN018_RS28220
subclass of: SO_0000673
so part of: HN018_RS28220
location: 1034..2002
location: region:1034-2002:1
so has part: feature:1034-2002:1:exon

WP_171837335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034-2002:1:exon

HN018_RS28225
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28225
old locus tag: HN018_28240
so part of: sequence
location: 1947..4109
location: region:1947-4109:1
so has part: feature:1947-4109:1:exon
subclass of: SO_0000010

position:1947:1
position: 1947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4109:1
position: 4109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1947-4109:1:exon

HN018_RS28225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28225
old locus tag: HN018_28240
inference: COORDINATES: protein motif:HMM:NF024573.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTAEGIIQKKRQAFLRLTNGLEMKINNLLVTNFRGIQRVEAEGLGDTIIIAGQNGSGKSCIFDAIRLLKSTYGGYQQNEWQNFFGEFQIQLHGGAKNLQGLFNDATKTVVIKVDFELRDSEKLYISTNAKTLVEETIWQSILPEAFQYGGWHKALFAAQFREKQPEVDKKVADLLPSVQTALSKKDISGKIEIKIDGQVAIQDSVLLNLIFSTYRPRDIGVIDFHGAQRHYGRESVQGINLNLDQAKQTYSQSTLYNYNAKYNNVKSEMAGSFIRELLAEQAGLKNVSDGEYSLNKTLKELFDSFFPDKTFLGPRPTKDGSLAFPVMTQNGTEHDLDELSSGEKEILYGYLRIRSSAPKDSIILLDEPELHLNPRLIRGLPEFYRKYLGEALQNQLWLVTHSDALIREAVGKPGFNVFHMLPCGAEVTGTSQLRPLNVTADLDLAIADLVGDLAAYRPGGKGLIFEGGGDSDFDKTITGSLFAEELRGINLISGTNKARVQALHEILARAYANGDLPTKFYAVTDSDADDPSVQTPGVNRFSWDVYHLENYLLEDSIIADVLNSLRLQKEYDAKTVGDRLVLAAQNVVPSMLVQKMKAYANSKLVDCIKLGFDPATLTIGNDLSEASNRSADKMRQVVLSDLSKERLNEVEQTFRSDIQQSFATGSWRKKLPGREILKQFVQLENLQGYELVRNLIVSRMTEKGVKPAGMKVIIDQIVAD
SIO_010081: HN018_RS28225
subclass of: SO_0000673
so part of: HN018_RS28225
location: 1947..4109
location: region:1947-4109:1
so has part: feature:1947-4109:1:exon

WP_171837336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1947-4109:1:exon

HN018_RS28230
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28230
old locus tag: HN018_28245
so part of: sequence
location: complement(4242..5726)
location: region:4242-5726:-1
so has part: feature:4242-5726:-1:exon
subclass of: SO_0000010

position:4242:-1
position: 4242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5726:-1
position: 5726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4242-5726:-1:exon

HN018_RS28230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28230
old locus tag: HN018_28245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPRPRVSRSRLTPAVAEEPPAKPARAPAKKVTRSRALSVDTLEQLGARQLAELLMAQAQSDPALGRSLRLVLAGTDGGTRLAAEVEKRLRTILRSRGFIEWDKVRPLAREFEGLRETIAGPLAQADPRAATTQMRLFLELAEGVFERSDDGSGSLGDVFRKAGADLGRLWALLPSRDPVTLAAELLSLLDADDYGTTDRLLEASGPALGSEGRAELRRLLHARLATLRRVRGRDDFGDSRGRFMVSLHLRELSDLEGDVDAYIAAIEAGGRSENFAGDIAERLITHHRPAEALGWLDRAAVRHDESRQIDLRIAALDALGRKTDAQHLRWTTFQRFLSVEHLRAYLRGLPDFDDVEAEEQAVTHALAHPDRGLALMFLVAWPNFKAANQLVRDHHEDLDGGEYFRLRPAAEALAEKYPAAATLLHRALAEDVLRRASSRQYQYAVRDVRACAGLATFLSDQPGLETHAAFMARLWREHPRKSGFWSLLDPGVR
SIO_010081: HN018_RS28230
subclass of: SO_0000673
so part of: HN018_RS28230
location: complement(4242..5726)
location: region:4242-5726:-1
so has part: feature:4242-5726:-1:exon

WP_171837337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4242-5726:-1:exon

HN018_RS28235
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28235
old locus tag: HN018_28250
so part of: sequence
location: complement(5797..6120)
location: region:5797-6120:-1
so has part: feature:5797-6120:-1:exon
subclass of: SO_0000010

position:5797:-1
position: 5797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6120:-1
position: 6120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5797-6120:-1:exon

HN018_RS28235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28235
old locus tag: HN018_28250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019400500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MRRGDLVTVALQGEQGKPRPALVVQADHFSDLPAITVLPITSTLIEAPLLRIPIEPNERNGLTKSSQIMVDKPQTPPRNKVGPTFGHLDDMTMVAVNRALALFLGLA
SIO_010081: HN018_RS28235
subclass of: SO_0000673
so part of: HN018_RS28235
location: complement(5797..6120)
location: region:5797-6120:-1
so has part: feature:5797-6120:-1:exon

WP_171837338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5797-6120:-1:exon

HN018_RS28240
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28240
old locus tag: HN018_28255
so part of: sequence
location: complement(6117..6341)
location: region:6117-6341:-1
so has part: feature:6117-6341:-1:exon
subclass of: SO_0000010

position:6117:-1
position: 6117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6341:-1
position: 6341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6117-6341:-1:exon

HN018_RS28240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28240
old locus tag: HN018_28255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010505707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MAATGTGAQRVQRRRDKLKAAGLRPVQIWVPDTRAPGFAQECARQSRMIQAAEGQDDPDHDAWSDATDTSGWTA
SIO_010081: HN018_RS28240
subclass of: SO_0000673
so part of: HN018_RS28240
location: complement(6117..6341)
location: region:6117-6341:-1
so has part: feature:6117-6341:-1:exon

WP_171837339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6117-6341:-1:exon

HN018_RS28245
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28245
old locus tag: HN018_28260
so part of: sequence
location: 6712..7821
location: region:6712-7821:1
so has part: feature:6712-7821:1:exon
subclass of: SO_0000010

position:6712:1
position: 6712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7821:1
position: 7821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712-7821:1:exon

HN018_RS28245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28245
old locus tag: HN018_28260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004584.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MHIKTITVSGLFGRQNPVVLSLYDDLNIMTGRNGSGKTTIMKLAWFIMSGNILLALREINFKICALETSEYTCTVIRTGSMHCKVELDVKGDRTLFEDDEGDPEDEPFLEAAEDKANPVLMAIGGSIFFPTFRRIEGGFSMASGRQRRNRSATRTESDVDESLATFARKLTKQNHLFVSAISTQDIVSLLLQRYATFSEEINAYQGNVSRNVIEKIKHYQQGDGHKQQNADDLLSETRADIEKIETFRTETMKPLDAVKDLVKKLFQHSGILFDKRLSFGDAAEAINSEALSAGEKQMLSFICYNAFYKNAIIFIDEPELSLHVDWQRQLYQILNEQRSGNQFIFATHSPFIYGKYPDKEVSVGVDRGE
SIO_010081: HN018_RS28245
subclass of: SO_0000673
so part of: HN018_RS28245
location: 6712..7821
location: region:6712-7821:1
so has part: feature:6712-7821:1:exon

WP_171837340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6712-7821:1:exon

HN018_RS28250
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28250
old locus tag: HN018_28265
so part of: sequence
location: 7818..8567
location: region:7818-8567:1
so has part: feature:7818-8567:1:exon
subclass of: SO_0000010

position:7818:1
position: 7818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8567:1
position: 8567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7818-8567:1:exon

HN018_RS28250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28250
old locus tag: HN018_28265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006376358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4435 domain-containing protein
translation: MSMRTDKPQVTTDELFELLKRTSLTTILVEGKDDIIFYRKIEEELREYNIDMLPAGNKNSVLELRDRISQISVLATVIFIVDKDLWVHSNPGEDLCPVGVLTTDGYSIENDLFADGDIEALLDTRELDQYHSDIVKFLKWYALAVSRALHGKDSAFRTHPGKVLDDIDFYLEQTKLSEGEAYPVDLLDFIKTNYKRVLRGKSLIAIAQRRFSANGRDVKHSTKQLIAFGASRRGENFRRICKLIRGELA
SIO_010081: HN018_RS28250
subclass of: SO_0000673
so part of: HN018_RS28250
location: 7818..8567
location: region:7818-8567:1
so has part: feature:7818-8567:1:exon

WP_239479510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7818-8567:1:exon

HN018_RS28255
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28255
old locus tag: HN018_28270
pseudo: true
so part of: sequence
location: 8819..9951
location: region:8819-9951:1
so has part: feature:8819-9951:1:exon
subclass of: SO_0000010

position:8819:1
position: 8819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9951:1
position: 9951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8819-9951:1:exon

HN018_RS28255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28255
old locus tag: HN018_28270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612141.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: HN018_RS28255
subclass of: SO_0000673
so part of: HN018_RS28255
location: 8819..9951
location: region:8819-9951:1
so has part: feature:8819-9951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8819-9951:1:exon

HN018_RS28260
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28260
old locus tag: HN018_28275
so part of: sequence
location: complement(10279..10572)
location: region:10279-10572:-1
so has part: feature:10279-10572:-1:exon
subclass of: SO_0000010

position:10279:-1
position: 10279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10572:-1
position: 10572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10279-10572:-1:exon

HN018_RS28260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28260
old locus tag: HN018_28275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018990404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MPRVVVTAGAVRGLERCRQFLAEKDSRAAGRAGSLIERQFLLLEGSPEIGRPLDEQPELRELVIGFGEAGYVALYQYAPGDEAVFVLAFRHQKEAGY
SIO_010081: HN018_RS28260
subclass of: SO_0000673
so part of: HN018_RS28260
location: complement(10279..10572)
location: region:10279-10572:-1
so has part: feature:10279-10572:-1:exon

WP_171837341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10279-10572:-1:exon

HN018_RS28265
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28265
old locus tag: HN018_28280
so part of: sequence
location: complement(10560..10832)
location: region:10560-10832:-1
so has part: feature:10560-10832:-1:exon
subclass of: SO_0000010

position:10560:-1
position: 10560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10832:-1
position: 10832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10560-10832:-1:exon

HN018_RS28265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28265
old locus tag: HN018_28280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019022923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MAVSVKLDDALKGRVQHLAASQRRTSHWIMREAIQQYVEREEARESFRQEALASWAEYQETGQHLTGDETRTWLQGWGNGPETDAPPCHE
SIO_010081: HN018_RS28265
subclass of: SO_0000673
so part of: HN018_RS28265
location: complement(10560..10832)
location: region:10560-10832:-1
so has part: feature:10560-10832:-1:exon

WP_171837342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10560-10832:-1:exon

HN018_RS28270
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28270
old locus tag: HN018_28285
so part of: sequence
location: 10954..11475
location: region:10954-11475:1
so has part: feature:10954-11475:1:exon
subclass of: SO_0000010

position:10954:1
position: 10954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11475:1
position: 11475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10954-11475:1:exon

HN018_RS28270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28270
old locus tag: HN018_28285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRPDLLLPDAASLLVLGELGLLDLLPSMANRLVLVDLVQMDLEHRAPDIAVPVLAWLHDQADRIQLGVTPSGETLRRLWHYEPAYWPSDGALTAIAEWLADAVMEADTDLLVLTDNLRLHEIASIRGPDADIDVMGLHGLLELAEAQGLVASATDRLIGCSLQQRVTHRRRR
SIO_010081: HN018_RS28270
subclass of: SO_0000673
so part of: HN018_RS28270
location: 10954..11475
location: region:10954-11475:1
so has part: feature:10954-11475:1:exon

WP_171837343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10954-11475:1:exon

HN018_RS28275
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28275
old locus tag: HN018_28290
so part of: sequence
location: complement(11507..12163)
location: region:11507-12163:-1
so has part: feature:11507-12163:-1:exon
subclass of: SO_0000010

position:11507:-1
position: 11507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12163:-1
position: 12163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11507-12163:-1:exon

HN018_RS28275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28275
old locus tag: HN018_28290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007284569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPKIRPPDGGATKRLRTQEELIELAQRLGSDWQTGDNVMTWIRRHEGRTGELSDLVHDGWSWDDVGRALALANIHYKTGIPMSGAVLRKKACEARQMERERLASENARRLALAAGISPGRIRSTAGNRLQMTIYPGPQENDRSSAPNTGAKLSPWQEPLEPEELAQMEPQFKPVSLRGGRKLPPPVPMPTAPRLPSNPMQGLSDDEIVARIFGKKR
SIO_010081: HN018_RS28275
subclass of: SO_0000673
so part of: HN018_RS28275
location: complement(11507..12163)
location: region:11507-12163:-1
so has part: feature:11507-12163:-1:exon

WP_171837344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11507-12163:-1:exon

HN018_RS28280
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28280
old locus tag: HN018_28295
so part of: sequence
location: complement(12786..13838)
location: region:12786-13838:-1
so has part: feature:12786-13838:-1:exon
subclass of: SO_0000010

position:12786:-1
position: 12786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13838:-1
position: 13838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12786-13838:-1:exon

HN018_RS28280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28280
old locus tag: HN018_28295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATMNQDRVAFLTPLIRGAFGALAKVIAAMDAAEVLASLQLMASDPTEVLIWENIGRRAWDEYEAGRPLGAERVELTVAPSLSVLTIEHLLTLLETLATGDRVRLLPTSEPWRVLVRAPGLPRVTVETWPTLDLPEDLLIRIVLGANSPAERLFKPGQMEALWKQRSAQALQHWLSVNQTRPLTAHPAFAEVVEQPVLGMPGVYLIRRPPMPYSPLLPVALYQSPVAWAVFETAEELAASRAYYRQPGASFFAELPLFRNRPPCSAEPTRMADGVAVDHIRVVRTPWDGAGAISVYTMSDKTLQKRPELRQEAYRGRYLIHVADDAEQALALWRKAGLEVHQIEWPSVIH
SIO_010081: HN018_RS28280
subclass of: SO_0000673
so part of: HN018_RS28280
location: complement(12786..13838)
location: region:12786-13838:-1
so has part: feature:12786-13838:-1:exon

WP_171837345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12786-13838:-1:exon

HN018_RS28285
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28285
old locus tag: HN018_28300
so part of: sequence
location: 14031..14303
location: region:14031-14303:1
so has part: feature:14031-14303:1:exon
subclass of: SO_0000010

position:14031:1
position: 14031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14303:1
position: 14303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14031-14303:1:exon

HN018_RS28285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28285
old locus tag: HN018_28300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020186229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPAPIEIGQGEDPRVVLGRVVHQQRIRLGISQEDLADQVGLDRTYVSGIERGIRNPTLLVLLRLAQALGVPAGRLLEEKTGSAGPQLTSA
SIO_010081: HN018_RS28285
subclass of: SO_0000673
so part of: HN018_RS28285
location: 14031..14303
location: region:14031-14303:1
so has part: feature:14031-14303:1:exon

WP_171837346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14031-14303:1:exon

HN018_RS28290
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28290
old locus tag: HN018_28305
so part of: sequence
location: 14526..15233
location: region:14526-15233:1
so has part: feature:14526-15233:1:exon
subclass of: SO_0000010

position:14526:1
position: 14526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15233:1
position: 15233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14526-15233:1:exon

HN018_RS28290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28290
old locus tag: HN018_28305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADARQTSQNHIATWDAPMVGSVLIGPGIASYVRIPVPGTQGLILSLRPPPHWHGSTSAIFIRNPEDARYGKPFLRLDYGPNKSTHAIDYHWNIEGKAARKAFPGITNHMPAGATGEAIYKGAKAFRAAGRVFIITGAVLDGISILTANRPWQRTLQVVTAWEAATVLANQAGKAGAAVGTMIEPGAGTMIGGGIGAIVGGFVGYYTASTVAGVFYNWAENTHFIPAHEIAVPSQ
SIO_010081: HN018_RS28290
subclass of: SO_0000673
so part of: HN018_RS28290
location: 14526..15233
location: region:14526-15233:1
so has part: feature:14526-15233:1:exon

WP_171837347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14526-15233:1:exon

HN018_RS28295
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28295
old locus tag: HN018_28310
so part of: sequence
location: 15230..15865
location: region:15230-15865:1
so has part: feature:15230-15865:1:exon
subclass of: SO_0000010

position:15230:1
position: 15230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15865:1
position: 15865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15230-15865:1:exon

HN018_RS28295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28295
old locus tag: HN018_28310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPPLLTITRDTSSFVKFQGFEIERLMPSGTISALIEWPLPPDDRDEAITQITAAILCSALLRLGHIAFRWDDAASAMGGTFFPEPQSPSFKTRVMASLFHGSLPAAFGVLVTDDEIMARNLFVWGGWSLGGQAALVYDPAADPAPIVDALQHGMDWRGRALPPGCKLLFGSGHDGGVALVAASSVEVLDQFIANVEAELAAEDFKPRQHR
SIO_010081: HN018_RS28295
subclass of: SO_0000673
so part of: HN018_RS28295
location: 15230..15865
location: region:15230-15865:1
so has part: feature:15230-15865:1:exon

WP_171837348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15230-15865:1:exon

HN018_RS28300
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28300
old locus tag: HN018_28315
so part of: sequence
location: 15937..16452
location: region:15937-16452:1
so has part: feature:15937-16452:1:exon
subclass of: SO_0000010

position:15937:1
position: 15937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16452:1
position: 16452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15937-16452:1:exon

HN018_RS28300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28300
old locus tag: HN018_28315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMTLPIVAICATLSATVIAAPKTVTSTLSCGPATVTATSITDPHVPPDDDFAWLAQKLTLTGTPTHKALPLQVDPKASMIVVGQQKALAAAVVSWACLTSTQGKTYVLLDVSCMRENYDGVCHGQNEWVRVVGTDGSHPDAAYVPQDPRYEALYKRLGISVDSVQLTGIF
SIO_010081: HN018_RS28300
subclass of: SO_0000673
so part of: HN018_RS28300
location: 15937..16452
location: region:15937-16452:1
so has part: feature:15937-16452:1:exon

WP_171837349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15937-16452:1:exon

HN018_RS28305
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28305
old locus tag: HN018_28320
so part of: sequence
location: complement(16571..17092)
location: region:16571-17092:-1
so has part: feature:16571-17092:-1:exon
subclass of: SO_0000010

position:16571:-1
position: 16571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17092:-1
position: 17092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16571-17092:-1:exon

HN018_RS28305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28305
old locus tag: HN018_28320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNHPDLLLPDAGSLLLLSELGQLALLPLIGRQLVLVDLVRMDLMRRSPELADPVLGWLKAQGERVRVDTTSSGEMLRRLWTYEPEYWPSDSGLTAIAEWLANAALEADIELLILTDTPRLHEVAGLRGPDADIDVIGISGLLELAEARGLVTSAAAILGGHALRHQHTSRRRS
SIO_010081: HN018_RS28305
subclass of: SO_0000673
so part of: HN018_RS28305
location: complement(16571..17092)
location: region:16571-17092:-1
so has part: feature:16571-17092:-1:exon

WP_171837350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16571-17092:-1:exon

HN018_RS28310
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28310
old locus tag: HN018_28325
so part of: sequence
location: 17270..18316
location: region:17270-18316:1
so has part: feature:17270-18316:1:exon
subclass of: SO_0000010

position:17270:1
position: 17270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18316:1
position: 18316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17270-18316:1:exon

HN018_RS28310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28310
old locus tag: HN018_28325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008956838.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MAGQRRKLTVFDRSMIEVRLCDSWGVRAIARDLDRSAGMISDEINRHGGATSYRAQAAATQAEADRRLTGRRPVLAHDGELFGRVAGLLRLGWSPEQISGRRKRMEAGTEQPPGLSVSHEAIYTAIYALPRGELRRELISYLRQDKPMRGRKPKGSERRGKLCNMTNIKERPEEIEGRLVPGHWEGDLILGTGGASAIGTLVERTSRFVVLVHMPTRKSDVVASAFSGALNAIPASLRKTLTYDQGKEMAQHESVALSTGMRIFFADPHSPWQRGSNENTNGLLRQYFPKGTALSGLDQDDLDIVADSLNSRPRKTLDYATPSEQFSMLLAGQAGVNKVFGVGVRSGT
SIO_010081: HN018_RS28310
subclass of: SO_0000673
so part of: HN018_RS28310
location: 17270..18316
location: region:17270-18316:1
so has part: feature:17270-18316:1:exon

WP_172443453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17270-18316:1:exon

HN018_RS28315
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28315
old locus tag: HN018_28330
so part of: sequence
location: complement(18602..18979)
location: region:18602-18979:-1
so has part: feature:18602-18979:-1:exon
subclass of: SO_0000010

position:18602:-1
position: 18602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18979:-1
position: 18979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18602-18979:-1:exon

HN018_RS28315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28315
old locus tag: HN018_28330
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MFVLARRGLSMLKAKRQIEAVIERGQATVELPTVEDTSAVVADLDKAGFEAQLVQLSTTLDVRHVRQKLGLSREQFALRYGLEVEAVRNWETGKREPDTAARSYLRVISNAPEQVGLAYAQTPSP
SIO_010081: HN018_RS28315
subclass of: SO_0000673
so part of: HN018_RS28315
location: complement(18602..18979)
location: region:18602-18979:-1
so has part: feature:18602-18979:-1:exon

WP_239479507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18602-18979:-1:exon

HN018_RS29035
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS29035
old locus tag: HN018_28335
so part of: sequence
location: complement(18993..19349)
location: region:18993-19349:-1
so has part: feature:18993-19349:-1:exon
subclass of: SO_0000010

position:18993:-1
position: 18993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19349:-1
position: 19349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18993-19349:-1:exon

HN018_RS29035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS29035
old locus tag: HN018_28335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWAIEDISFEMVNDMTDDPVMTLVVKTPVGALVFTAEPVAQGSILILQGTHVQGAHKGAVGGQNLGVIAQAVMKGMGFDGLVVEGAVRTTGARPGRRPRDIRYTRRVLDPPPVGSSRP
SIO_010081: HN018_RS29035
subclass of: SO_0000673
so part of: HN018_RS29035
location: complement(18993..19349)
location: region:18993-19349:-1
so has part: feature:18993-19349:-1:exon

WP_239479508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18993-19349:-1:exon

HN018_RS28320
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28320
old locus tag: HN018_28340
so part of: sequence
location: complement(19389..19715)
location: region:19389-19715:-1
so has part: feature:19389-19715:-1:exon
subclass of: SO_0000010

position:19389:-1
position: 19389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19715:-1
position: 19715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19389-19715:-1:exon

HN018_RS28320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28320
old locus tag: HN018_28340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012275119.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTSLAKLRQKLLTDPEVKAEYDRLGPIFAVVGEMIEARQAAGLTQAEIAARMGTTQSVVARLETARHMPTFDLVARYAAAIDRRLDIRLVPNGAPDGLSSGLMRPACP
SIO_010081: HN018_RS28320
subclass of: SO_0000673
so part of: HN018_RS28320
location: complement(19389..19715)
location: region:19389-19715:-1
so has part: feature:19389-19715:-1:exon

WP_171837323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19389-19715:-1:exon

HN018_RS28325
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28325
old locus tag: HN018_28345
so part of: sequence
location: complement(19712..19906)
location: region:19712-19906:-1
so has part: feature:19712-19906:-1:exon
subclass of: SO_0000010

position:19712:-1
position: 19712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19906:-1
position: 19906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19712-19906:-1:exon

HN018_RS28325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28325
old locus tag: HN018_28345
inference: COORDINATES: protein motif:HMM:NF017757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MQFRFRCYRTPEMRFSGRDGIARAIYVTAIGRRVIVVHAFVKKTQKTLRATLALAERRAQEITR
SIO_010081: HN018_RS28325
subclass of: SO_0000673
so part of: HN018_RS28325
location: complement(19712..19906)
location: region:19712-19906:-1
so has part: feature:19712-19906:-1:exon

WP_171837324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19712-19906:-1:exon

HN018_RS28330
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28330
old locus tag: HN018_28350
so part of: sequence
location: 20050..21282
location: region:20050-21282:1
so has part: feature:20050-21282:1:exon
subclass of: SO_0000010

position:20050:1
position: 20050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21282:1
position: 21282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20050-21282:1:exon

HN018_RS28330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28330
old locus tag: HN018_28350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194469.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MFYKFEVENFFSIRDRQVIDLTVDGKVPDTEGRFGPIFRGADVRAPKVVALFGANASGKTTVLRALMFLATFIRDSVQTTNAGISGCERFNDMESADRPMCFAIEFGGAMNFTPEVQQRVTEGECLEQGLYRYELELEVTEGLVRRIAAESLRQKPKGQGKWQRVFERDVAGRVRDSRSFSLSGYQHLVKTLAGNHTVISSFAKFQHPTAQLFEQAARRVFFQIDPIHAGGDGGVIDFLKTQPAMMLKLNNELGRIDVGIEEMRFQDSLLNGPVLMFKHKGLQVEMPWMLESHGTRAFIKMFPFLSAALDCGGVVAIDEMDAAIHPLVLPELIRWFHDAHVRNRLDGQIWLSCHSASLLDDLTKEEIVICEKDREGRTSVHSLMDVKVRRDDNHYRKYLSGIYGGVPTIG
SIO_010081: HN018_RS28330
subclass of: SO_0000673
so part of: HN018_RS28330
location: 20050..21282
location: region:20050-21282:1
so has part: feature:20050-21282:1:exon

WP_171837325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20050-21282:1:exon

HN018_RS28335
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28335
old locus tag: HN018_28355
so part of: sequence
location: 21378..21848
location: region:21378-21848:1
so has part: feature:21378-21848:1:exon
subclass of: SO_0000010

position:21378:1
position: 21378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21848:1
position: 21848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21378-21848:1:exon

HN018_RS28335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28335
old locus tag: HN018_28355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194470.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLREASLHVHLVVHNLGRGAGDPLARVQLAVQRLAQLRRTRIAPPERFILLDGDQAARDSARAACARHLAAQHKITIVWQEPCFEALLVRHLPNCTTRRPPDTPEALRVLEREWSGYKKPLSRATLAMRIDRDAVRRAAGVERELRALLRCLGLEE
SIO_010081: HN018_RS28335
subclass of: SO_0000673
so part of: HN018_RS28335
location: 21378..21848
location: region:21378-21848:1
so has part: feature:21378-21848:1:exon

WP_239479509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21378-21848:1:exon

HN018_RS28340
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28340
old locus tag: HN018_28360
so part of: sequence
location: complement(21907..22089)
location: region:21907-22089:-1
so has part: feature:21907-22089:-1:exon
subclass of: SO_0000010

position:21907:-1
position: 21907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22089:-1
position: 22089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21907-22089:-1:exon

HN018_RS28340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28340
old locus tag: HN018_28360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNWTVETLGAVVDDQIAFLPKDMQAAFLRPAERIEAVDLERIGQPHVTHLQVKLWEMGVR
SIO_010081: HN018_RS28340
subclass of: SO_0000673
so part of: HN018_RS28340
location: complement(21907..22089)
location: region:21907-22089:-1
so has part: feature:21907-22089:-1:exon

WP_204259814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21907-22089:-1:exon

HN018_RS28345
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28345
old locus tag: HN018_28365
so part of: sequence
location: complement(22355..22981)
location: region:22355-22981:-1
so has part: feature:22355-22981:-1:exon
subclass of: SO_0000010

position:22355:-1
position: 22355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22981:-1
position: 22981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22355-22981:-1:exon

HN018_RS28345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28345
old locus tag: HN018_28365
inference: COORDINATES: protein motif:HMM:NF025107.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTGKLMGRIGRPKRDKVFGEGRAIPLDRNAKARIWAYALARTAKLRRPGQHRGPLSRATLDVLRTLLWHFHNRSTGRCFPSYERIADSARVHRATVARAIAALEREGVLTWENRLVRQRVAIEGLFGRQWVMVPRRTSNAYCFYDYRRDAFGRPVDPSSSPKSQNSTETIIQENQKLAREQAECGATIPLDPSNPLEAALLRLSQVMR
SIO_010081: HN018_RS28345
subclass of: SO_0000673
so part of: HN018_RS28345
location: complement(22355..22981)
location: region:22355-22981:-1
so has part: feature:22355-22981:-1:exon

WP_171837327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22355-22981:-1:exon

HN018_RS28350
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28350
old locus tag: HN018_28370
so part of: sequence
location: 23313..23936
location: region:23313-23936:1
so has part: feature:23313-23936:1:exon
subclass of: SO_0000010

position:23313:1
position: 23313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23936:1
position: 23936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23313-23936:1:exon

HN018_RS28350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28350
old locus tag: HN018_28370
inference: COORDINATES: protein motif:HMM:NF018691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTIVLASRKGGAGKTTLSCHLAVEAERAGAGPVAVIDTDQMQGLSQWWDARKAAEPVLIRAEPDLATALQLLRDSGAKLVIIDTPPALSGSVAETIALADLVLIPVQPSPDDLRAVGVTVDMVNEAKKPMAFIINRVKPRVRLTGEAAIALSQHGVVAPCFLWDRTDYAAAKTDGLTAPEIDPDGRAAQEVKELWRYVATRLEMTR
SIO_010081: HN018_RS28350
subclass of: SO_0000673
so part of: HN018_RS28350
location: 23313..23936
location: region:23313-23936:1
so has part: feature:23313-23936:1:exon

WP_171837328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23313-23936:1:exon

HN018_RS28355
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28355
old locus tag: HN018_28375
so part of: sequence
location: 23933..24184
location: region:23933-24184:1
so has part: feature:23933-24184:1:exon
subclass of: SO_0000010

position:23933:1
position: 23933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24184:1
position: 24184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23933-24184:1:exon

HN018_RS28355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28355
old locus tag: HN018_28375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKQSLSSLSSLIPAKGEAAKAETLPDEKPRLSKPLKEERHGLTIRIRQSHNDRLRTMVYREGMTKQDLLDRAIDEMLERYGY
SIO_010081: HN018_RS28355
subclass of: SO_0000673
so part of: HN018_RS28355
location: 23933..24184
location: region:23933-24184:1
so has part: feature:23933-24184:1:exon

WP_171837329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23933-24184:1:exon

HN018_RS28360
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28360
old locus tag: HN018_28380
so part of: sequence
location: complement(24253..24831)
location: region:24253-24831:-1
so has part: feature:24253-24831:-1:exon
subclass of: SO_0000010

position:24253:-1
position: 24253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24831:-1
position: 24831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24253-24831:-1:exon

HN018_RS28360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28360
old locus tag: HN018_28380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512413.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MQLHTLDGARKYLTAGERDAFLKAAEHADREDRTLCMTLAYSGCRLSEALALTVDRVDLAAGTLIFESLKKRRPGIYRSVPVPPALLEALDLVHRIRELQAKRGKGNGTRLWPWSRMTGWRAVHAVMEAAKLNGVHASPKGLRHGFGVAAVSAGIPLNLVQKWLGHAQLSTTAIYADAVGAEEQDIASRMWR
SIO_010081: HN018_RS28360
subclass of: SO_0000673
so part of: HN018_RS28360
location: complement(24253..24831)
location: region:24253-24831:-1
so has part: feature:24253-24831:-1:exon

WP_171837351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24253-24831:-1:exon

HN018_RS28365
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28365
old locus tag: HN018_28385
so part of: sequence
location: complement(24921..25217)
location: region:24921-25217:-1
so has part: feature:24921-25217:-1:exon
subclass of: SO_0000010

position:24921:-1
position: 24921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25217:-1
position: 25217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24921-25217:-1:exon

HN018_RS28365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28365
old locus tag: HN018_28385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012555425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MPKPAHQAPARPPPTQIPLFSETASLVNIVPDRNAWRFYRLAIWPDLFGGALLLRHWGRIGTPGQQRLDRYPDLGAALNALARLLRAKRQRGYQDRAE
SIO_010081: HN018_RS28365
subclass of: SO_0000673
so part of: HN018_RS28365
location: complement(24921..25217)
location: region:24921-25217:-1
so has part: feature:24921-25217:-1:exon

WP_171837330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24921-25217:-1:exon

HN018_RS28370
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28370
old locus tag: HN018_28390
so part of: sequence
location: complement(25343..26158)
location: region:25343-26158:-1
so has part: feature:25343-26158:-1:exon
subclass of: SO_0000010

position:25343:-1
position: 25343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26158:-1
position: 26158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25343-26158:-1:exon

HN018_RS28370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28370
old locus tag: HN018_28390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEQRRHIGWWKPAEGTESKSITWPEAFELASLDWSEDPLSNTDAPRLTPLGLQDFLLNGSLLLLIACVIATGLDYVVFPHIPTLLLKYDQNAGPHFSTLVSASDNLTAYLAIFTAAIAVYVARFTIRAQVRSKSRQKWIDKVRTLISDLISDIDLVFRKEYIDLTSINKKRMQLELLLNPSEKDHRLLTMLIRVCASPGLPVKADDNLRAFWKANDMEYRIHSGAKGLIRILLLGKVSRNNKVQGEAISYVIRLSNVVLKREWERVRETQ
SIO_010081: HN018_RS28370
subclass of: SO_0000673
so part of: HN018_RS28370
location: complement(25343..26158)
location: region:25343-26158:-1
so has part: feature:25343-26158:-1:exon

WP_171837331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25343-26158:-1:exon

HN018_RS28375
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28375
old locus tag: HN018_28395
so part of: sequence
location: complement(26421..27440)
location: region:26421-27440:-1
so has part: feature:26421-27440:-1:exon
subclass of: SO_0000010

position:26421:-1
position: 26421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27440:-1
position: 27440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26421-27440:-1:exon

HN018_RS28375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28375
old locus tag: HN018_28395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020820384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MDRSERLTEAEDGPSLPALIDGRDAGAELVQVIQAELAAAASYAEVARAASTRSAYAQDWRVFVTWCVARTLEPLPADPRAVAVFLASEAARGCAPMTIGRRLAAIGHVHRQHGLQPPQGREGAAAIVEVMAGIRRSHGKPPARKSAADADVMRDLLRAIVGDDIRSVRDRALLAIGMAGAFRRSELVALQVAQITREARGLRVQFGRTKTDQDGSGQVIAIPYGRRIRPVQLLEAWLAQTGISEGFVFRKLKGGAATDQPMSDRAVARVVQARVAAAGYDPTLFAGHSLRAGFITSGARAGASIFKLKEVSRHISTDVLAGYVRDAQIFEGHAGEGFL
SIO_010081: HN018_RS28375
subclass of: SO_0000673
so part of: HN018_RS28375
location: complement(26421..27440)
location: region:26421-27440:-1
so has part: feature:26421-27440:-1:exon

WP_171837332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26421-27440:-1:exon

HN018_RS28380
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28380
old locus tag: HN018_28400
so part of: sequence
location: 27622..28776
location: region:27622-28776:1
so has part: feature:27622-28776:1:exon
subclass of: SO_0000010

position:27622:1
position: 27622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28776:1
position: 28776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27622-28776:1:exon

HN018_RS28380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28380
old locus tag: HN018_28400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSQSGVFVLQNDGSLVAMQPTQFAAEVDFQELLSKFPELLVGDQIDPGSPRRFVLVKQEQAIGHDTDVPRWSVDHLFLDQDGIPTLVEVKRKSDTRLRREVVGQMLDYASNCQTSWTAETMRASLEETCESAGTSYDDVITTLLDPTTSLDPVALAEAFWTNVKTNLQAGKVRMLFVADEIPTELRRIVEFLNEQMDPAEILAIELRQFTGQGLRTIVPMIFGQTQEATTKKKFPPGARWTEEHFLAKIDATFSEPQATVARAVLDWMKETNLPLVWGTGRENGSVYPLLKPQGVSINPAYLSTDGKIWLQLGTMQNRPVFGDLTVRRELLDRFGRVAGSGLKEQDLERTPGLSFAVIAADPEGLSKVIAAFNWLLDRVKQAN
SIO_010081: HN018_RS28380
subclass of: SO_0000673
so part of: HN018_RS28380
location: 27622..28776
location: region:27622-28776:1
so has part: feature:27622-28776:1:exon

WP_171837333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27622-28776:1:exon