Lichenicola cladoniae strain PAMC 26569 plasmid unnamed6, complete sequence.
type: Entry
definition: Lichenicola cladoniae strain PAMC 26569 plasmid unnamed6, complete sequence.
sequence version: NZ_CP053713.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NZ_CP053713.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14917828
keyword: RefSeq
source: Lichenicola cladoniae
organism: Lichenicola cladoniae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Lichenicola.
reference: 1
references: 25001073
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP053713.1.\nBacteria and source DNA available from PAMC, Korea Polar Research\nInstitute.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler assembler v. v0.4.8\nAssembly Name :: KOPRI_Lcla_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 516.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 06:14:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,687\nCDSs (total) :: 5,624\nGenes (coding) :: 5,398\nCDSs (with protein) :: 5,398\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 226\nCDSs (without protein) :: 226\nPseudo Genes (ambiguous residues) :: 0 of 226\nPseudo Genes (frameshifted) :: 81 of 226\nPseudo Genes (incomplete) :: 148 of 226\nPseudo Genes (internal stop) :: 71 of 226\nPseudo Genes (multiple problems) :: 63 of 226\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 43488
topology: circular
so has quality: SO_0000988
location: 1..43488
location: region:1-43488:1
RO_0002162: 1484109

NZ_CP053713
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14917828
type: BioSample
SIO_000068: biosample

1
title: Biodiversity and physiological characteristics of Antarctic and Arctic lichens-associated bacteria
author: Lee, Y.M.
author: Kim, E.H.
author: Lee, H.K.
author: Hong, S.G.
journal: World J Microbiol Biotechnol
volume: 30
issue: 10
pages: 2711-2721
year: 2014
pubmed: 25001073

25001073
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Noh, H.-J.
author: Shin, S.C.
author: Park, Y.
author: Choi, A.
author: Baek, K.
author: Cho, Y.
author: Lee, Y.M.
journal: Submitted (19-MAY-2020) Division of Polar Life Sciences, Korea Polar Research institute, 26 Songdomirae-ro, Incheon 21990, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43488:1
position: 43488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43488:1:source
so part of: sequence
organism: Lichenicola cladoniae
mol type: genomic DNA
strain: PAMC 26569
isolation source: lichen
host: Cladonia borealis
culture collection: PAMC:26569
type material: type strain of Lichenicola cladoniae Noh et al. 2020
plasmid: unnamed6
country: Antarctica
collection date: 2010-02-06
collected by: Yung Mi Lee

1484109
type: Taxonomy
SIO_000068: taxonomy

HN018_RS27820
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27820
old locus tag: HN018_27835
so part of: sequence
location: complement(60..1010)
location: region:60-1010:-1
so has part: feature:60-1010:-1:exon
subclass of: SO_0000010

position:60:-1
position: 60
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010:-1
position: 1010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60-1010:-1:exon

HN018_RS27820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27820
old locus tag: HN018_27835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016558605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MEATELTARVATQIADYIRAGHAPEGTLLVERKLADQLRVSRSPVRNALRVLQTEGIVGAPERGGYMVLKPIQDIRPRPQPPASDEEIYGKVAEDRLSGGLPDKVTENTLVRRYGLTRVQLAKVLRRIAGEGWIERLPGRGWAFLPLLTSAQAYEDSYRFRLVIEPAAILDPGFELKHPALEECCREQQSLVAGRIWTVSDAELFELNSQIHQLVIECSHNAFFRDNLKRIDTLRRIREFRQSIDRDYAVVRCREHLQIARLLLAAKRGDAADLMRRHLASVSSTRMARQEPRSGEWPTSAARVGHAPFWATSHDG
SIO_010081: HN018_RS27820
subclass of: SO_0000673
so part of: HN018_RS27820
location: complement(60..1010)
location: region:60-1010:-1
so has part: feature:60-1010:-1:exon

WP_171837198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60-1010:-1:exon

HN018_RS27825
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27825
old locus tag: HN018_27840
so part of: sequence
location: 1285..2433
location: region:1285-2433:1
so has part: feature:1285-2433:1:exon
subclass of: SO_0000010

position:1285:1
position: 1285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433:1
position: 2433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285-2433:1:exon

HN018_RS27825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27825
old locus tag: HN018_27840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012972817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MGALVRRLRAEGRDIIGMVNGEPDFSTPDNIKDAGIRAIATNNTRYTDSNGTAELRTALSAKFKRENGLDYAPDQIVVSSGNKPLLHAALLAMIDPGDEVIIPAPHWPSHPDIVQMAGGVPVSVLCPIEAGFRLSPEALEAAITPRTRALVLNSPNNPTGAAYDRHELQALIAVLKRHPDIWILTDEIYEHIRFDGRDMPSLAALDEEIAARTVTANGASKGYVMTGWRIGFAGGPRPIMEAISSIVGQLIGSPSAISQAAMIEALAGDQGFLQRNASIFQERRDIAVEALGQMPGLRCHVPEGAFYLFVDCAGVIGCTQPDGHVIQTDDDFVRGCVKHAGVAFVPGSAFGLSPYFRLAYSLETGQLRVAMERLRRYCNMIH
SIO_010081: HN018_RS27825
subclass of: SO_0000673
so part of: HN018_RS27825
location: 1285..2433
location: region:1285-2433:1
so has part: feature:1285-2433:1:exon

WP_239479501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1285-2433:1:exon

HN018_RS27830
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
gene: istA
locus tag: HN018_RS27830
old locus tag: HN018_27845
so part of: sequence
location: 2699..4231
location: region:2699-4231:1
so has part: feature:2699-4231:1:exon
subclass of: SO_0000010

position:2699:1
position: 2699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231:1
position: 4231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699-4231:1:exon

HN018_RS27830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
gene: istA
locus tag: HN018_RS27830
old locus tag: HN018_27845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011788482.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MPGERVSMRKIRELLRLRLEQRLPQRTIGLSLRLGQGTISDYLGRAHRAGLDWPLPDDMDDTQLEALLFPPLPDVPLDQRPVPDWAAVHRDLRRPNMTLALLWEEYRAGSAHAFGYSWFCDLYRAWAGRLKPTLRQVHTAGEKLFVDFAGQSMSVIDGASGEKHQAEIFVAVLGASSFVYVEATWSQTLPDWISAHVNALAFFGGVPHQIVSDNLKAGVTRACFFEPTINRTYAEMAAHYRSAVIPARPYKPRDKAKVEVGVQVVQRWVLAQLRNRQFFSLADLNLAIRELVEQINDRPMRGWGTTRRALYEQLDRPALLALPEVPYEYADWRYCRVNLDYHIEIARHFYSVPFRLVRQPVEARITTRTVEIFHRGSLVATHLRSVRQHQPSTVSDHMPSTHRRYRDWTHERITREAMATGDDTAALIEIVLRSRPHPEQGLRSCIGILGLRGRYGPERVDAACAKALALGTRSYGSVAAILKNAQEKKSAITDQPSLMHENIRGPGYYH
SIO_010081: HN018_RS27830
subclass of: SO_0000673
so part of: HN018_RS27830
location: 2699..4231
location: region:2699-4231:1
so has part: feature:2699-4231:1:exon

WP_171837391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2699-4231:1:exon

HN018_RS27835
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
gene: istB
locus tag: HN018_RS27835
old locus tag: HN018_27850
so part of: sequence
location: 4243..5010
location: region:4243-5010:1
so has part: feature:4243-5010:1:exon
subclass of: SO_0000010

position:4243:1
position: 4243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5010:1
position: 5010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4243-5010:1:exon

HN018_RS27835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
gene: istB
locus tag: HN018_RS27835
old locus tag: HN018_27850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018067884.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLIHPMVDRLRDLGLAAMADAFIEMSRQSAADDLSREDWLGLLVDREVTARDNKRLGRRLSHARLRQNAVVEDTDLRTPRGLDRGLFQSLAACGWIRDSQHLLIVGPTGVGKSWLACALGHKACREGYAVLYRRAPRLFADIATARGEGRLPRLMRTIERTRLLIIDDWGPEPLSAEQRRDLMEIVDDRDGKGSLLITSQVPTSRWHEIIGDPTLGDAILDRIIHRSHRIELKGESLRKRQVLNTAEGLTSAKEK
SIO_010081: HN018_RS27835
subclass of: SO_0000673
so part of: HN018_RS27835
location: 4243..5010
location: region:4243-5010:1
so has part: feature:4243-5010:1:exon

WP_171837390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4243-5010:1:exon

HN018_RS27840
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27840
old locus tag: HN018_27855
so part of: sequence
location: complement(5354..6253)
location: region:5354-6253:-1
so has part: feature:5354-6253:-1:exon
subclass of: SO_0000010

position:5354:-1
position: 5354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253:-1
position: 6253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5354-6253:-1:exon

HN018_RS27840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27840
old locus tag: HN018_27855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020487022.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDRFHAMRVFTRIVERRSFTHAAEDLGLPRSSVTDAVKALEARLGVPLLQRTTRHVSPTLDGEAYYQRCLRLIADLEDAEGALTGAKPQGMLHVNVHGTMASHFIVPHLPGFLAEYPGVELFISEGDRYVDLVRDGVDCAIRVGRLPDSDLITRRLTTLEETTCVSPSYLARHGVPQDLDALDGHRMVGFHSSATGSVLPLEFISNGVARTVILPASITVSGAETYAAAARMGLGLIQAPRYRLEEDFRRGTLSPVLTDTPPSPSPVSVLYPRAKQLSPRLRTFLNWLFAKIRNETAAE
SIO_010081: HN018_RS27840
subclass of: SO_0000673
so part of: HN018_RS27840
location: complement(5354..6253)
location: region:5354-6253:-1
so has part: feature:5354-6253:-1:exon

WP_171837233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5354-6253:-1:exon

HN018_RS27845
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27845
old locus tag: HN018_27860
so part of: sequence
location: 6367..7107
location: region:6367-7107:1
so has part: feature:6367-7107:1:exon
subclass of: SO_0000010

position:6367:1
position: 6367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7107:1
position: 7107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6367-7107:1:exon

HN018_RS27845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27845
old locus tag: HN018_27860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003525964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSSTSQKVAIVTGASGGIGAAVSERLAKDGFTVVVNYVGNAAGAEALVRKIDAAGGRATTAQADVSDAAAFVRMFDAAEAAFGGVDVLVNSGGIMKLSPIGETDDALFDQQVAVNLKGVFNGLREAARRLRNGGRIVSFSSSVVGLYQPTYGVYAATKAGVEAMTHILSKELRGRDITVNAIAPGPVATKLFLDGKPKEAIEGAAKASPLGRLGEPDDIARAVSFLVGPDGGWINGQILRANGGVI
SIO_010081: HN018_RS27845
subclass of: SO_0000673
so part of: HN018_RS27845
location: 6367..7107
location: region:6367-7107:1
so has part: feature:6367-7107:1:exon

WP_171837239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6367-7107:1:exon

HN018_RS27850
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27850
old locus tag: HN018_27865
so part of: sequence
location: 7169..8071
location: region:7169-8071:1
so has part: feature:7169-8071:1:exon
subclass of: SO_0000010

position:7169:1
position: 7169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8071:1
position: 8071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7169-8071:1:exon

HN018_RS27850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27850
old locus tag: HN018_27865
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004820551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSQSVILVTGASSGFGLMTAKSLAEAGHTTYASMRETSGKGAALVAELSAWGKERHADLRTVELDVQSDASVDAAVSHVLADAGRLDVVVHNAGHMVFGPAEAFTPEQLAQQYDVNVLGTQRLNRAALPHMRRRRQGLLVWVGSSSTRGGTPPFLGPYFAAKAAMDALAVSYAGELARWGVETTIVVPGSFTTGTNHFANAGKPSDATRAAEYEDGPYAGVSDQALKGLAALSPEDADPDEVGRAIVRVVDAPFGKRPFRVHIDPAQDGAEIVNGVADRMRREMFRDIGLADLLTPRTKD
SIO_010081: HN018_RS27850
subclass of: SO_0000673
so part of: HN018_RS27850
location: 7169..8071
location: region:7169-8071:1
so has part: feature:7169-8071:1:exon

WP_171837232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7169-8071:1:exon

HN018_RS27855
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27855
old locus tag: HN018_27870
so part of: sequence
location: 8082..8531
location: region:8082-8531:1
so has part: feature:8082-8531:1:exon
subclass of: SO_0000010

position:8082:1
position: 8082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8531:1
position: 8531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8082-8531:1:exon

HN018_RS27855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27855
old locus tag: HN018_27870
inference: COORDINATES: protein motif:HMM:NF025079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
translation: MSAIHEGVWDLVPADRLLVEAKRWTNWLRFAVMLLFFRARGRFPRVAAELDGAAVAELARTLGVPEPSIAEPLLPDAADRTAERQRAEIRALFGFREASAADAEALGCATRLLPGLATPSSLPRTPRPGAVRSVSSRPPPTASRASSAR
SIO_010081: HN018_RS27855
subclass of: SO_0000673
so part of: HN018_RS27855
location: 8082..8531
location: region:8082-8531:1
so has part: feature:8082-8531:1:exon

WP_171837231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8082-8531:1:exon

HN018_RS27860
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27860
old locus tag: HN018_27875
so part of: sequence
location: 8784..9143
location: region:8784-9143:1
so has part: feature:8784-9143:1:exon
subclass of: SO_0000010

position:8784:1
position: 8784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9143:1
position: 9143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8784-9143:1:exon

HN018_RS27860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27860
old locus tag: HN018_27875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLFTDWGLQDLGACRQRVAVEAPHELRRHPDAARHVWLAAYVHLRGRAVTDTLVDLLIETVHHIGARAENKVEQELLDDIKRVGGKQDLLFNLANAAVEKPDELPVQHENIRGSSYYH
SIO_010081: HN018_RS27860
subclass of: SO_0000673
so part of: HN018_RS27860
location: 8784..9143
location: region:8784-9143:1
so has part: feature:8784-9143:1:exon

WP_171837229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8784-9143:1:exon

HN018_RS27865
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
gene: istB
locus tag: HN018_RS27865
old locus tag: HN018_27880
pseudo: true
so part of: sequence
location: 9154..9915
location: region:9154-9915:1
so has part: feature:9154-9915:1:exon
subclass of: SO_0000010

position:9154:1
position: 9154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915:1
position: 9915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154-9915:1:exon

HN018_RS27865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
gene: istB
locus tag: HN018_RS27865
old locus tag: HN018_27880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006956108.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
SIO_010081: HN018_RS27865
subclass of: SO_0000673
so part of: HN018_RS27865
location: 9154..9915
location: region:9154-9915:1
so has part: feature:9154-9915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9154-9915:1:exon

HN018_RS27870
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27870
old locus tag: HN018_27885
so part of: sequence
location: 9995..10132
location: region:9995-10132:1
so has part: feature:9995-10132:1:exon
subclass of: SO_0000010

position:9995:1
position: 9995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10132:1
position: 10132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9995-10132:1:exon

HN018_RS27870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27870
old locus tag: HN018_27885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGFNRNHRLQSSEYALHALTPLFWGHMNPYGRFDLDMRTRLDFN
SIO_010081: HN018_RS27870
subclass of: SO_0000673
so part of: HN018_RS27870
location: 9995..10132
location: region:9995-10132:1
so has part: feature:9995-10132:1:exon

WP_171837228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9995-10132:1:exon

HN018_RS27875
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27875
old locus tag: HN018_27890
so part of: sequence
location: 10304..11725
location: region:10304-11725:1
so has part: feature:10304-11725:1:exon
subclass of: SO_0000010

position:10304:1
position: 10304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11725:1
position: 11725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10304-11725:1:exon

HN018_RS27875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27875
old locus tag: HN018_27890
inference: COORDINATES: protein motif:HMM:TIGR00879.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar porter family MFS transporter
translation: MSTVPNVEPEVAATMTPWLVVVLAVILLSGALFGYDQGVISGALTSIKREFSLSALLVEVVTSWVTLGALFGALLGGELADRIGRQRAVLIAGVVFTLGSLVEAFAPGTLMLVGGRLIVGFGVGVAAVAAPLYAAELAPAALRGRFVSAYQLAVAGGIFAAYLVDGWLSEAGAWRWMLGLSAAPGLMLIAVGLLAPQSPRWLMRVGRRTDAATQMRKIHPGTDPGPALDAIATTLANDRGQASWAEVFGKRWRRPLLVGVGLAVFQQITGVNAVIYYADQIFQAAGFTTQAAQTTVTTWAVGGVNVAATFIAIAFIDRLGRRKLLLAGLFGMTLSLVVVGAAFEFITTGNAPHPAATSTAGIVTLVALVVFIACFAFSLGPVVWTVINEISPGHIRGRAVAVATAVNWAAAFFVSQIFLTLIDTLGNSFTFWLFGLFCIVGWIWVFYAVPETKGRSLEQIQLLWKKSEPEHAG
SIO_010081: HN018_RS27875
subclass of: SO_0000673
so part of: HN018_RS27875
location: 10304..11725
location: region:10304-11725:1
so has part: feature:10304-11725:1:exon

WP_171837227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10304-11725:1:exon

HN018_RS27880
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27880
old locus tag: HN018_27895
so part of: sequence
location: 12423..13097
location: region:12423-13097:1
so has part: feature:12423-13097:1:exon
subclass of: SO_0000010

position:12423:1
position: 12423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13097:1
position: 13097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12423-13097:1:exon

HN018_RS27880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27880
old locus tag: HN018_27895
inference: COORDINATES: protein motif:HMM:NF018691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVLTIASRKGGTGKSTASVAIASMLDAEGVDVGLLDTDPNQGAYRWATQKYGGTTLKAYAESDTEKLADLLPTLAARHAVLIVDTAGFGNQAATVAMAGADGVLVPVTPGEGDVVEAGRTVGFVEGLAKMARRPIPVRVLPNRLRRSTTLTKHVLAEMDANGLPRLKASLSEAVSYGEMSFSAALPRTGTAAGEVEALVAELRELRWLPEKGATSSLRKEVKA
SIO_010081: HN018_RS27880
subclass of: SO_0000673
so part of: HN018_RS27880
location: 12423..13097
location: region:12423-13097:1
so has part: feature:12423-13097:1:exon

WP_171837226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12423-13097:1:exon

HN018_RS27885
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27885
old locus tag: HN018_27900
so part of: sequence
location: 13244..13435
location: region:13244-13435:1
so has part: feature:13244-13435:1:exon
subclass of: SO_0000010

position:13244:1
position: 13244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13435:1
position: 13435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13244-13435:1:exon

HN018_RS27885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27885
old locus tag: HN018_27900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MREQHKTVLVNFRVTEKLAIALASAAIERGITQKVILARALKASGLDVPPEDLQDRSPRRRGK
SIO_010081: HN018_RS27885
subclass of: SO_0000673
so part of: HN018_RS27885
location: 13244..13435
location: region:13244-13435:1
so has part: feature:13244-13435:1:exon

WP_171837225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13244-13435:1:exon

HN018_RS27890
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27890
old locus tag: HN018_27905
so part of: sequence
location: 13727..14353
location: region:13727-14353:1
so has part: feature:13727-14353:1:exon
subclass of: SO_0000010

position:13727:1
position: 13727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14353:1
position: 14353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13727-14353:1:exon

HN018_RS27890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27890
old locus tag: HN018_27905
inference: COORDINATES: protein motif:HMM:NF025107.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTGKLVGRLGRSKREKVFGEGRAIPLDRNAKARIWAYALARTAKLRRPGQHRGPLTRATLDVLRTLLWGFHNWSTGRCFPSYERIADSARVHRATVARAIAALEREGVLTWENRLVRQRVAIEGLFGPQWVMVPRRTSNAYSFYDYRRDAFGQPVDVPSSPKSQKSTKTISQENQKLAHEQTECGAIVTLDPDNPLEAALLRLGQAMR
SIO_010081: HN018_RS27890
subclass of: SO_0000673
so part of: HN018_RS27890
location: 13727..14353
location: region:13727-14353:1
so has part: feature:13727-14353:1:exon

WP_171837224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13727-14353:1:exon

HN018_RS27895
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27895
old locus tag: HN018_27910
so part of: sequence
location: complement(14392..16524)
location: region:14392-16524:-1
so has part: feature:14392-16524:-1:exon
subclass of: SO_0000010

position:14392:-1
position: 14392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16524:-1
position: 16524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14392-16524:-1:exon

HN018_RS27895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27895
old locus tag: HN018_27910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813232.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MERVTYHNAENGFCVLRVKARGQRDLVVVVGHAAAVNAGEFISATGWWINDREHGLQFKAATVVTTQPTTLEGIEKYLGSGMIRGIGPVYAKALVKAFGEAVFDLIEQEPARLREVTGIGAKRASRIVAGWADQKAIREIMLFLHANGVGTSRAVRIFKTYGQEAIALITENPYRLARDIRGIGFRTADQVAAKLGIAKDAMIRVRAGLSFGLAEATGQGHCGLPVAELIHSTAELIEVETGLIEMALGLELQDGALIADTVDDAPCVFLAGLYRSEQVIAEQLRLLSADRPPWPMIEVAKAIPWVEGKTGLKLAPSQIEALTLAVRTKVLVITGGPGVGKTTLVNSILKVLGAKGMQVALCAPTGRAAKRLTESTGLDGRTIHRLLEADPKTGGFKRGEEHPLECDLLVVDEASMVDVPLMRALLKALPNRAALLLVGDVDQLPSVGPGQVLADIIGSDAVPVIRLTEVFRQAAQSRIITNAHRINQGQMPELTAPEGSDFFFVEADEPEDAAAKLLAVVSRRIPKRFGLDPVRDVQVLCPMNRGSLGARTLNVALQQVLNPPGDQRVERFGWTFCPGDKVMQVANDYERDVFNGDLGIISAIDMEESTLTVSFEGRAVEYGFGELDELVLAYATTIHKAQGSEYPVVVIPLATQHYAMLARNLLYTGVTRGKRLVVLVGQRKALAMAVRNGNARRRWSKLREWLQGTN
SIO_010081: HN018_RS27895
subclass of: SO_0000673
so part of: HN018_RS27895
location: complement(14392..16524)
location: region:14392-16524:-1
so has part: feature:14392-16524:-1:exon

WP_239479502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14392-16524:-1:exon

HN018_RS27900
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27900
old locus tag: HN018_27915
so part of: sequence
location: 16771..17205
location: region:16771-17205:1
so has part: feature:16771-17205:1:exon
subclass of: SO_0000010

position:16771:1
position: 16771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17205:1
position: 17205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16771-17205:1:exon

HN018_RS27900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27900
old locus tag: HN018_27915
inference: COORDINATES: protein motif:HMM:NF014021.2
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MAYLSVRVPEGVRNRLKAAAAQRGERLQDLVGGLVEQFLTEIERKPPELADVLQRLRLIQGSLQARGVASLWVFGSVARGDARPDSDVDVTIEFAPDAAPSLFEIGHIKDEVEAALGHRVDLGERSTMTPKVAATAERDMVQAF
SIO_010081: HN018_RS27900
subclass of: SO_0000673
so part of: HN018_RS27900
location: 16771..17205
location: region:16771-17205:1
so has part: feature:16771-17205:1:exon

WP_171837223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16771-17205:1:exon

HN018_RS27905
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27905
old locus tag: HN018_27920
so part of: sequence
location: 17205..17567
location: region:17205-17567:1
so has part: feature:17205-17567:1:exon
subclass of: SO_0000010

position:17567:1
position: 17567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17205-17567:1:exon

HN018_RS27905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27905
old locus tag: HN018_27920
inference: COORDINATES: protein motif:HMM:NF014043.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MPRSPEERLQDIREAATDLRDFVGSIETAAFHRIPHADRMGFRALKNALTELGEAVKALPADIVARHPRIDWKGFAGLRDLVTHQYFGLDTKRLLPIIQTEIPALLVAVEIELRLEDSSS
SIO_010081: HN018_RS27905
subclass of: SO_0000673
so part of: HN018_RS27905
location: 17205..17567
location: region:17205-17567:1
so has part: feature:17205-17567:1:exon

WP_171837222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17205-17567:1:exon

HN018_RS27910
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27910
old locus tag: HN018_27925
so part of: sequence
location: 17786..18808
location: region:17786-18808:1
so has part: feature:17786-18808:1:exon
subclass of: SO_0000010

position:17786:1
position: 17786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18808:1
position: 18808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17786-18808:1:exon

HN018_RS27910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27910
old locus tag: HN018_27925
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MTTVRSRLQLPNTEAAQSFALFKATVEAVGDAVVVTSCELDPPGPRIEYVNPAFTRMTGFSAEESLGQTPRFLQGPLTDRVELDRLRVCLINEQTFDGEVINYRKDGGAYLIEWMVTPVKNPAGQTTHWLSVQRDVTARKQLEHQQKLLVAELHHRTRNLLAVTRAIALRTLPNSSDRDVFDARLAALGRVQSFLSTTPTQFVSLDDIVRGELEAVGEDGLGQATVEGPFVELPCDKVQALVLLLHECATNAIKHGALSQPDGRLAVRWHFAEEARLVLTWQESGVRMPADPNRRGFGTDLITRALRYQLSAETWLEFRSDGVWCTIWLPAESFRAGHTS
SIO_010081: HN018_RS27910
subclass of: SO_0000673
so part of: HN018_RS27910
location: 17786..18808
location: region:17786-18808:1
so has part: feature:17786-18808:1:exon

WP_171837221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17786-18808:1:exon

HN018_RS27915
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27915
old locus tag: HN018_27930
so part of: sequence
location: complement(18916..19914)
location: region:18916-19914:-1
so has part: feature:18916-19914:-1:exon
subclass of: SO_0000010

position:18916:-1
position: 18916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19914:-1
position: 19914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18916-19914:-1:exon

HN018_RS27915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27915
old locus tag: HN018_27930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012286797.1
GO function: GO:0004673 - protein histidine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MLWSGSSDLVWDAERMRVATDAAGVALWSWNVDTDEIALDERAHALWGASRNRPVTFETLSARIHPEDLGRVKAAFTATRGMIGAYEIDFRILHHDSIRWISARGQSEDVGIVNRVMFGVFLDVTDRKQAEETRELLAGEMNHRIKNLFALASALTSLAARSTETKAEMADDLTGRLAALGRAHSLVRPNPGQENKALLGELLAVLLAPYDDQTTIGRRLHISAPERPVGEASATTLALVVHELATNSVKYGALSAASGTLDVSCTDEGSDHVILWTERGGPALNPSQGPKGFGSKLISRSISFQLEGSITYDWLPQGAVVTLRISKTCMTR
SIO_010081: HN018_RS27915
subclass of: SO_0000673
so part of: HN018_RS27915
location: complement(18916..19914)
location: region:18916-19914:-1
so has part: feature:18916-19914:-1:exon

WP_171837220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18916-19914:-1:exon

HN018_RS27920
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27920
old locus tag: HN018_27935
so part of: sequence
location: complement(19915..20526)
location: region:19915-20526:-1
so has part: feature:19915-20526:-1:exon
subclass of: SO_0000010

position:19915:-1
position: 19915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20526:-1
position: 20526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19915-20526:-1:exon

HN018_RS27920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27920
old locus tag: HN018_27935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007607994.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheB
translation: MYNIFVSECGLPFIIAIGASGGEGMTDTVTLLHLLPKPVHAVVLAVLHRPFDKISHLRDILARGSGMPVVVAGDAERFVPGTCYIGEPDGHLTLKTDAQASLVTGQDDKLRNRTVDTLFNSVAAFSPGRAIGIILSGSLDDGSRGLAAVHAASGVTMVLDPRGKWPPGMQQNAIQHDGPVDLVGTAHMIAEMVGRVTTEARYL
SIO_010081: HN018_RS27920
subclass of: SO_0000673
so part of: HN018_RS27920
location: complement(19915..20526)
location: region:19915-20526:-1
so has part: feature:19915-20526:-1:exon

WP_239479503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19915-20526:-1:exon

HN018_RS27925
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27925
old locus tag: HN018_27940
so part of: sequence
location: 20773..21198
location: region:20773-21198:1
so has part: feature:20773-21198:1:exon
subclass of: SO_0000010

position:20773:1
position: 20773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21198:1
position: 21198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20773-21198:1:exon

HN018_RS27925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27925
old locus tag: HN018_27940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MFVLARRGLSMLKAKRQIEAVIETGQATVELPTVEDTSTVVAELDTAGFEAQLVQLSTTLDVRHVRQKLGLSREQFALRYGLEVEAVRNWETSKRDPDTAARSYLRVISNAPEQVGLAYAQNPSPYQYGFRRYRSAGRCRH
SIO_010081: HN018_RS27925
subclass of: SO_0000673
so part of: HN018_RS27925
location: 20773..21198
location: region:20773-21198:1
so has part: feature:20773-21198:1:exon

WP_204259812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20773-21198:1:exon

HN018_RS27930
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27930
old locus tag: HN018_27945
so part of: sequence
location: complement(21161..21367)
location: region:21161-21367:-1
so has part: feature:21161-21367:-1:exon
subclass of: SO_0000010

position:21161:-1
position: 21161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21367:-1
position: 21367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21161-21367:-1:exon

HN018_RS27930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27930
old locus tag: HN018_27945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWKGDEAGFAVQVPTARSVCHGQKEWLRIVGSDGSHPDAAYAPQDPRYETLYKRLGINADNVQLTGIF
SIO_010081: HN018_RS27930
subclass of: SO_0000673
so part of: HN018_RS27930
location: complement(21161..21367)
location: region:21161-21367:-1
so has part: feature:21161-21367:-1:exon

WP_171837219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21161-21367:-1:exon

HN018_RS27935
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27935
old locus tag: HN018_27950
so part of: sequence
location: 21642..21893
location: region:21642-21893:1
so has part: feature:21642-21893:1:exon
subclass of: SO_0000010

position:21642:1
position: 21642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21893:1
position: 21893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21642-21893:1:exon

HN018_RS27935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27935
old locus tag: HN018_27950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MTTLTVTTRGQVTFRKDVLHHLGIHPGEKIELDMLPDGRVSLKAARPAGTIDGFVGLLAGKTRKVASLEEIDAAASSGWARRE
SIO_010081: HN018_RS27935
subclass of: SO_0000673
so part of: HN018_RS27935
location: 21642..21893
location: region:21642-21893:1
so has part: feature:21642-21893:1:exon

WP_171837218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21642-21893:1:exon

HN018_RS27940
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27940
old locus tag: HN018_27955
so part of: sequence
location: 21890..22288
location: region:21890-22288:1
so has part: feature:21890-22288:1:exon
subclass of: SO_0000010

position:21890:1
position: 21890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22288:1
position: 22288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21890-22288:1:exon

HN018_RS27940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27940
old locus tag: HN018_27955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004107652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKITVDTNILVRAVVRDDEKQGEAAAALLKEAELIVVPLPCLCEFVWVLRRVYGFGQPDISIALRVLLGAGNVVVNRPAVDAGLAIFETGGDFADGLIAYEGRWLGGEVFVSFDKKAVALIAKQGQQTRLLA
SIO_010081: HN018_RS27940
subclass of: SO_0000673
so part of: HN018_RS27940
location: 21890..22288
location: region:21890-22288:1
so has part: feature:21890-22288:1:exon

WP_171837217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21890-22288:1:exon

HN018_RS27945
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27945
old locus tag: HN018_27960
so part of: sequence
location: 22299..22820
location: region:22299-22820:1
so has part: feature:22299-22820:1:exon
subclass of: SO_0000010

position:22299:1
position: 22299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22820:1
position: 22820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22299-22820:1:exon

HN018_RS27945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27945
old locus tag: HN018_27960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNHPDLLLPDAGSLLLLSELGQLALLPLIGRQLVLVDLVRMDLMRRSPKLADPVLGWLKAQGERVRVDTTSSGEMLRRLWTYEPEYWPLDSGLIAIAEWLANATLEADIELLILTETPRLHEVAGMRGPDADIDVIGISGLLKLAEARGLVTSAAAILGGHILRHQRTRRRRS
SIO_010081: HN018_RS27945
subclass of: SO_0000673
so part of: HN018_RS27945
location: 22299..22820
location: region:22299-22820:1
so has part: feature:22299-22820:1:exon

WP_171837216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22299-22820:1:exon

HN018_RS27950
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27950
old locus tag: HN018_27965
so part of: sequence
location: complement(22941..23456)
location: region:22941-23456:-1
so has part: feature:22941-23456:-1:exon
subclass of: SO_0000010

position:22941:-1
position: 22941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23456:-1
position: 23456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22941-23456:-1:exon

HN018_RS27950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27950
old locus tag: HN018_27965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITLPVAAICTTLSATAIAAPKTVTSTLSCGPATVTATSTTDPHVPPNDDFAWLAQKIMLSGTPAHKSVSLQVDPKAGMIAIGRQKALAAAVVSWACLTSTQGKTYVLLDVSCMRENDDGVCHGQKEWVRIVGTDGSHPDTAYAPQDPRYDALYKRLGISVDNVQLTGIF
SIO_010081: HN018_RS27950
subclass of: SO_0000673
so part of: HN018_RS27950
location: complement(22941..23456)
location: region:22941-23456:-1
so has part: feature:22941-23456:-1:exon

WP_171837215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22941-23456:-1:exon

HN018_RS27955
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27955
old locus tag: HN018_27970
so part of: sequence
location: complement(23771..24052)
location: region:23771-24052:-1
so has part: feature:23771-24052:-1:exon
subclass of: SO_0000010

position:23771:-1
position: 23771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24052:-1
position: 24052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23771-24052:-1:exon

HN018_RS27955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27955
old locus tag: HN018_27970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020818031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MQTRLERARTRDDTRQWVQDRRARTRQLIELGGLVQKAGLVELLEDDRATLLGALLDVADQLHGREEEDPQHLKARWQRRGRRTFENDAAEIA
SIO_010081: HN018_RS27955
subclass of: SO_0000673
so part of: HN018_RS27955
location: complement(23771..24052)
location: region:23771-24052:-1
so has part: feature:23771-24052:-1:exon

WP_171837214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23771-24052:-1:exon

HN018_RS27960
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27960
old locus tag: HN018_27975
so part of: sequence
location: complement(24066..24374)
location: region:24066-24374:-1
so has part: feature:24066-24374:-1:exon
subclass of: SO_0000010

position:24066:-1
position: 24066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24374:-1
position: 24374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24066-24374:-1:exon

HN018_RS27960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27960
old locus tag: HN018_27975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003630660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MARKPRDYDAELQTLMERAKKVKSQKTIQLGEIAQMVGADALPLEAFAGALMAALEQSKKQPEAIARWTERGETLFQTGGKRGKQSKSGNPAPASTGNGSAA
SIO_010081: HN018_RS27960
subclass of: SO_0000673
so part of: HN018_RS27960
location: complement(24066..24374)
location: region:24066-24374:-1
so has part: feature:24066-24374:-1:exon

WP_171837213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24066-24374:-1:exon

HN018_RS27965
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
gene: traA
locus tag: HN018_RS27965
old locus tag: HN018_27980
so part of: sequence
location: 24556..27387
location: region:24556-27387:1
so has part: feature:24556-27387:1:exon
subclass of: SO_0000010

position:24556:1
position: 24556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27387:1
position: 27387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24556-27387:1:exon

HN018_RS27965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
gene: traA
locus tag: HN018_RS27965
old locus tag: HN018_27980
inference: COORDINATES: protein motif:HMM:NF010464.0
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHFSAKIISRGGGRSAIAAAAYRATEMLDDHLTSQVHDYTAKQGVAHSEILLPAGAPARFLDRSVLWNEVEAKERRKDSQLARDVEIALPRELSRTEAIALVRDFVSEQFVARGMIADLNVHWGKTADGEKQPHAHVMLTMRSVSEEGFGPKVREWNSTTLLTDWRERWAELANERLCALGHDARIDHRSNAEQEIPLQPQHKIGPAGARREARGEDAERADEHRAIARENGARLLQEPEIALRALTHQHSTFSKRDLARFVSRHSDGADQFTAVMAVVQASPELVRVGEDGRGQERFSTREMLETEARLERDALALAAASGHAVSERDKATALRRTSAGSGAGSGGLGIEQQAAFVHVTGDADLAVVVGFAGTGKSTMLGTARIAWEAAGYRVHGSALSGIAAEGLEGGSGIESRTIHRRLHAWAQGREELTARDVLVVDEAGMIGSRMMDQLMSRVREAGAKLVLVGDPEQLQAIEAGAAFRAIADRVGTVEITEVRRQRAAWQRTATRELATSGTAAALERYTEAGMVHASATLVEAKAALVAGWDLERQRQPNESRVMLASTRADVTDLNQLARGRLQAAGALGSDHVVQTERGERSFANGDRLMFLRNERGLGGNAGGRNSVAVKNGTLGTLMAVESGGERLTVRLDGAGPEGSSNSRHVTFYLRDYAHLDHGYAATVHKAQGVTVDRAHVLATEMMDRHAAYVGLTRHRDGVALHYARETFGDAVQLARALGRERAKDTTLDYGSGDLAQRYGARRGLVPESEIVLPAAAARQAREVELARDVAAGRARFRDRFAAHRQQRQAAAERDEQARGLVGQWDQLIKSYGAALPGLDRDPVYVAARQKLLGFGQHVRERPELVAVLRERGAEFGMAERPNLQRVLADPKPEQVIDGIVAQSENAQRAQAAAYQERVRQAAEVARRAQEQRPRGPRMGM
SIO_010081: HN018_RS27965
subclass of: SO_0000673
so part of: HN018_RS27965
location: 24556..27387
location: region:24556-27387:1
so has part: feature:24556-27387:1:exon

WP_239479504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24556-27387:1:exon

HN018_RS27970
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27970
old locus tag: HN018_27985
so part of: sequence
location: 27392..28027
location: region:27392-28027:1
so has part: feature:27392-28027:1:exon
subclass of: SO_0000010

position:27392:1
position: 27392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28027:1
position: 28027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27392-28027:1:exon

HN018_RS27970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27970
old locus tag: HN018_27985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDEAEDRLYGLIEIAERHQAAVQAALEGLAVERAALKAERERLGQDVNGLSRTIRTAVQGGVAESMFVAAETGASALKAATGPLLGRLDQVGTIADQAEATLRRVVLWASWRLLGWGIAAIAALGMMWWLASSAVLWWDAGAIGQAQEQKGELEAQIAELRANKDGWERAGMLAKITQCGPRSRPCVRVDENAGQFDADGHGDYRVIQGY
SIO_010081: HN018_RS27970
subclass of: SO_0000673
so part of: HN018_RS27970
location: 27392..28027
location: region:27392-28027:1
so has part: feature:27392-28027:1:exon

WP_171837212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27392-28027:1:exon

HN018_RS27975
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27975
old locus tag: HN018_27990
so part of: sequence
location: 28123..28317
location: region:28123-28317:1
so has part: feature:28123-28317:1:exon
subclass of: SO_0000010

position:28123:1
position: 28123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28317:1
position: 28317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28123-28317:1:exon

HN018_RS27975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27975
old locus tag: HN018_27990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014777351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MITSRLTSKAQTTILQPVRVALHLHEGDEIANVIEARRVVLTDDSLSTFLEWDSSADVEAYAAL
SIO_010081: HN018_RS27975
subclass of: SO_0000673
so part of: HN018_RS27975
location: 28123..28317
location: region:28123-28317:1
so has part: feature:28123-28317:1:exon

WP_171837211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28123-28317:1:exon

HN018_RS27980
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27980
old locus tag: HN018_27995
so part of: sequence
location: complement(28334..28711)
location: region:28334-28711:-1
so has part: feature:28334-28711:-1:exon
subclass of: SO_0000010

position:28334:-1
position: 28334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28711:-1
position: 28711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28334-28711:-1:exon

HN018_RS27980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27980
old locus tag: HN018_27995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009210693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRC-barrel domain-containing protein
translation: MASIDNPSETGGRIIAASKVSGTSVYSEAGEKLGNVYDVMLNKVSGKAEYAILSFGGFLGIGDKYHPLPWNQLKYDPRQGGYVINLSRDRLEGAPAYAANEMSVWDDLRGHDIDDYYGHGAGLAS
SIO_010081: HN018_RS27980
subclass of: SO_0000673
so part of: HN018_RS27980
location: complement(28334..28711)
location: region:28334-28711:-1
so has part: feature:28334-28711:-1:exon

WP_171837210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28334-28711:-1:exon

HN018_RS27985
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27985
old locus tag: HN018_28000
so part of: sequence
location: 28854..29567
location: region:28854-29567:1
so has part: feature:28854-29567:1:exon
subclass of: SO_0000010

position:28854:1
position: 28854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29567:1
position: 29567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28854-29567:1:exon

HN018_RS27985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27985
old locus tag: HN018_28000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTEHGLALVDPGVTAQLEWLLDEVLVVQMKMMSAIDAVCAQASGIIGRLTDHAASGAASLVATTAAGPAGPDRPPTPAMKAYVDSLAKQNGVKPPGGYTSSSAICPAFLDRHAFSKQAHSKEATSAANPTRSCTGLQAARGSWRVPKENYQGKAIDKNKAVSRSSSAPAATSADGPTETALRISYSNKEVALKLGPPTTAMAVGMDLPVSISQHSDKRAGSDFHITSRKSPNNLDE
SIO_010081: HN018_RS27985
subclass of: SO_0000673
so part of: HN018_RS27985
location: 28854..29567
location: region:28854-29567:1
so has part: feature:28854-29567:1:exon

WP_171837209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28854-29567:1:exon

HN018_RS27990
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27990
old locus tag: HN018_28005
so part of: sequence
location: 29667..30926
location: region:29667-30926:1
so has part: feature:29667-30926:1:exon
subclass of: SO_0000010

position:29667:1
position: 29667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30926:1
position: 30926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29667-30926:1:exon

HN018_RS27990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27990
old locus tag: HN018_28005
inference: COORDINATES: protein motif:HMM:NF013776.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTIKGLEEEKFRQILAAHLTPSQPISSPEHLKGREHMLTQISRSFNSPGKHIFIHGDRGVGKTSLAQTAATLRQSSDAEPILVGCSNPSFLAIVRDAVKRCLPVGDGVLQRKRETKLKAGIAGFGVELTRSIAAGNVPDVESVNDAVQLLKFVAEYHSTQPVIILDEFDQLTDDGERKLCAQMIKEVSDQRVNVKFIICGIGSSLVDLIGSHLSTGRYLAPYSLDRLTHDARWDILTSAATAMGVEIGHSFRVRIGQISDGFPSYIHLIGEQILWNMFDDETETSACAQTHFNEGVRQAVSEAQPTLKAIYEKATQKYSNDYEEILWALADQHLMRRQTTDIYDKSYLRIMGERSSSDHPILSKPIFSQRLNSLKSARHGEIIVGTGAGWYEFRENIVRGFVRLKAESMGIEIGVEGYG
SIO_010081: HN018_RS27990
subclass of: SO_0000673
so part of: HN018_RS27990
location: 29667..30926
location: region:29667-30926:1
so has part: feature:29667-30926:1:exon

WP_171837208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29667-30926:1:exon

HN018_RS27995
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS27995
old locus tag: HN018_28010
so part of: sequence
location: 31154..31477
location: region:31154-31477:1
so has part: feature:31154-31477:1:exon
subclass of: SO_0000010

position:31154:1
position: 31154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31477:1
position: 31477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31154-31477:1:exon

HN018_RS27995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS27995
old locus tag: HN018_28010
EC number: 2.7.7.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014239542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MSPALASDPVLVHLRTALTGLYGSRLERVLLFGSRARGDAQPQSDYDVAVFLEPLHDRWAELDRLADLRVRFLDETGAFIDAKPYSTAAYGDPTPLMHEIRREGLDL
SIO_010081: HN018_RS27995
subclass of: SO_0000673
so part of: HN018_RS27995
location: 31154..31477
location: region:31154-31477:1
so has part: feature:31154-31477:1:exon

WP_171837207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31154-31477:1:exon

HN018_RS28000
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28000
old locus tag: HN018_28015
so part of: sequence
location: 31654..31857
location: region:31654-31857:1
so has part: feature:31654-31857:1:exon
subclass of: SO_0000010

position:31654:1
position: 31654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31857:1
position: 31857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31654-31857:1:exon

HN018_RS28000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28000
old locus tag: HN018_28015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHAEFLRLTRDDPRLDADLRVFLSRSYNLKAIADYETDPQTGVTPARAADAIAIGRCFVASIENIIE
SIO_010081: HN018_RS28000
subclass of: SO_0000673
so part of: HN018_RS28000
location: 31654..31857
location: region:31654-31857:1
so has part: feature:31654-31857:1:exon

WP_171837206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31654-31857:1:exon

HN018_RS28005
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28005
old locus tag: HN018_28020
so part of: sequence
location: 31854..32045
location: region:31854-32045:1
so has part: feature:31854-32045:1:exon
subclass of: SO_0000010

position:31854:1
position: 31854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32045:1
position: 32045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31854-32045:1:exon

HN018_RS28005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28005
old locus tag: HN018_28020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNENPFSQGAPGGNERAPPEVDNSAQWRRLEQTIMEARERFGNLPADELQAILDEAVMTSRQA
SIO_010081: HN018_RS28005
subclass of: SO_0000673
so part of: HN018_RS28005
location: 31854..32045
location: region:31854-32045:1
so has part: feature:31854-32045:1:exon

WP_171837205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31854-32045:1:exon

HN018_RS28010
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28010
old locus tag: HN018_28025
so part of: sequence
location: 32054..33067
location: region:32054-33067:1
so has part: feature:32054-33067:1:exon
subclass of: SO_0000010

position:32054:1
position: 32054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33067:1
position: 33067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32054-33067:1:exon

HN018_RS28010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28010
old locus tag: HN018_28025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019692619.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTDHQNGVSMRVTLIEQEATQKVISFNDGHVPVLVVAAGERAGIRFLEFFASAIRNPHTRRAYLRAVRDFLAWCETMGVSSVAGVQPLHVASWIELQTRERSAPTVKLHLAALRHLFDWLVTGQVIPTNPAASVRGPAHSVRKGKTPVLDPLEARQLLDSIDVSTPIGLRDRALIGLMVFSFARVGAALAMRVEDVFVQNRRLWVHLREKGGKRHEMPCHHTLEAYLHAYLETTGIAKDPKGPLFRTIGRGTGRLSRTPLPQANAYLMVQRRTLAAGIGTRIGNHSFRATGITAYLKNGGTLENAAAMANHASTRTTQLYDRRRDDISLDEVERIRV
SIO_010081: HN018_RS28010
subclass of: SO_0000673
so part of: HN018_RS28010
location: 32054..33067
location: region:32054-33067:1
so has part: feature:32054-33067:1:exon

WP_239479499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32054-33067:1:exon

HN018_RS28015
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28015
old locus tag: HN018_28030
so part of: sequence
location: complement(33108..34010)
location: region:33108-34010:-1
so has part: feature:33108-34010:-1:exon
subclass of: SO_0000010

position:33108:-1
position: 33108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34010:-1
position: 34010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33108-34010:-1:exon

HN018_RS28015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28015
old locus tag: HN018_28030
inference: COORDINATES: protein motif:HMM:NF020039.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMP-30/gluconolactonase/LRE family protein
translation: MSDEVIELAVDAGATIGESPTWSASEAALYWIDVKKPALYRYHPESGAQRAWPLPSDIGAFVLDDDLSGAVVALRTGVFALDFASGRLTLLAPPPFDPALHRFNEGACDVTGRFWVGVMFDPLQPGVCVPIAASLHSFTRAGGLKPEPDAAELHNGMAWSADSRQFLLSHSQAGVIWSFDFEPESGRLSHRRTFAAIPKGDGLPDGAAVDTDGGYWCALHGAGRLRRFNKDGSIDCDIVLPVSQPTMCAFAGPKLDTLYVTSAADKLSDAQRRAEPHAGGLLRLRPSRTGVPRRCTLASA
SIO_010081: HN018_RS28015
subclass of: SO_0000673
so part of: HN018_RS28015
location: complement(33108..34010)
location: region:33108-34010:-1
so has part: feature:33108-34010:-1:exon

WP_171837204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33108-34010:-1:exon

HN018_RS28020
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28020
old locus tag: HN018_28035
so part of: sequence
location: 34165..35943
location: region:34165-35943:1
so has part: feature:34165-35943:1:exon
subclass of: SO_0000010

position:34165:1
position: 34165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35943:1
position: 35943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34165-35943:1:exon

HN018_RS28020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28020
old locus tag: HN018_28035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012029843.1
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-requiring protein
translation: MTVSDFVWSRLGEWGLKRVFGYPGDGVGGLDLALERAKEKMAYVQVRHEEMAAFMASAHAKFTGEVGLCYATSGPGAIHLLTGLYDAKMDHVPVVAIVGQQARTAIGAHYQQEVDLQALFKDVASEYVVTAMVPEQIRHCIDRAVRIAATTRSVTCVIIPNDLQELAYKDPPLVHGTTHTGVGYAGPAKLPEQSLLHQAADVLNAGKKVAILVGSGALGATDEVIAIAEKLQAGVSKALLGKAVLPDSLPWCTGGLGLLGTKPSWDLMQECDTLLMIGSSFPYSEFLPKPGTARGVQIDLDGTRLSLRYPMEINMVGDSATALKALLPLLEQKKPGSWRKEIESNVEAWWKTLEDRAMQPANPINPQRIFWEASKRLPENCIMTGDSGSVANWYGRDIKMRRGMMGSLSGSLASLGAATPYAVAAKFAFPDRVVLAFIGDGAMQMNGLNVMITISKYWREWSNPKLIVMVLNNQDLNQVTWEERVQLGSGKTESTQAIPDFAYDKYAELLGLKGIVVRDPEKLGAAWDEAFAADRPVIMNVYADPNVPPLPPHITFKDAKNFLTMMATEPELGSVLKNSAKELLASVLPSKH
SIO_010081: HN018_RS28020
subclass of: SO_0000673
so part of: HN018_RS28020
location: 34165..35943
location: region:34165-35943:1
so has part: feature:34165-35943:1:exon

WP_171837235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34165-35943:1:exon

HN018_RS28025
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28025
old locus tag: HN018_28040
so part of: sequence
location: 35956..37056
location: region:35956-37056:1
so has part: feature:35956-37056:1:exon
subclass of: SO_0000010

position:35956:1
position: 35956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37056:1
position: 37056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35956-37056:1:exon

HN018_RS28025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28025
old locus tag: HN018_28040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008973026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enolase C-terminal domain-like protein
translation: MLPIGVVRAQAFAIPTDGPEADGTASWDSTTLVVVHAQAGDWEGIGYSYADLSVAALVNSKLASVIVGNDASDPPRALRLMQVVVRNLGRDGIAACAISAVDTASWDLKAKLLDVPLAHLLGQYRNAVPIYGSGGFTNYDDGRLAEQLARWVEHDGCRWVKMKVGMHPERDPERVSQAKAAIGPATLFVDANNAYGVKQAIEFARRFLDEQDVRWFEEPVSSDDLVGLRRVRDQVSAAIEIAAGEYGYEPTYFRRMLEAGAVDVLQADATRCGGVTGFMLAASLPEAFHVDISAHCALALHRHLGTAAPRFQHCEWFHDHVRIERMLFDGAPVPHDGAIMPDPERPGFGLVFKRQDAERFAVCTGS
SIO_010081: HN018_RS28025
subclass of: SO_0000673
so part of: HN018_RS28025
location: 35956..37056
location: region:35956-37056:1
so has part: feature:35956-37056:1:exon

WP_171837203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35956-37056:1:exon

HN018_RS28030
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28030
old locus tag: HN018_28045
so part of: sequence
location: 37059..38039
location: region:37059-38039:1
so has part: feature:37059-38039:1:exon
subclass of: SO_0000010

position:37059:1
position: 37059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38039:1
position: 38039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37059-38039:1:exon

HN018_RS28030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28030
old locus tag: HN018_28045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006611564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARDMTALGSSGMAALGLASLAATRLKQQATSRLAKTQNQAASSPSAPARLDPDAAVHAARRLNRAAGVLAASVLADSAVEHYRGQFHNRAMVTPLVTASLSLAVSAHGNADKRPVAHRARDGVYLLAAATGVIGTGFHLYNVLSKPGGLSWQNLFYSAPLGAPAALSLSGAMGFLAERVRDTSPGSSPMIAGVAAGRVVGVATSVGLLGTMGEAGLLHFRGNYQNPFMYVPVSLPPVAAAALGLAALGRTGQRSRWARTLLRLTAAMGYAGAGFHLRGVARQMGGWRNWSQNILNGPPVPAPPSFTGLAMAGLAALGLLEDHPDD
SIO_010081: HN018_RS28030
subclass of: SO_0000673
so part of: HN018_RS28030
location: 37059..38039
location: region:37059-38039:1
so has part: feature:37059-38039:1:exon

WP_171837202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37059-38039:1:exon

HN018_RS28035
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28035
old locus tag: HN018_28050
so part of: sequence
location: 38032..38697
location: region:38032-38697:1
so has part: feature:38032-38697:1:exon
subclass of: SO_0000010

position:38032:1
position: 38032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38697:1
position: 38697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38032-38697:1:exon

HN018_RS28035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28035
old locus tag: HN018_28050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008973024.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconate 2-dehydrogenase subunit 3 family protein
translation: MTDHDGTRNPDRYPDYDVMSKQFSPSWNEVTRKVVHARLAVPREPRFFNQGEWDTLQAVCARIMPQPATGAIIPLPAYVDAKITEKHEDGYRYASLPHQGEAWQRGLAALDQEAADSHGARYHLLTPEQQDALLQRMQDGKLDCSAWQGMPCKLFFEHRVIADITHAYYAHPIAWNEIGFGGPASPRGYVRMGLNRRDPWEAAEAHPGKEAHARRENKRVG
SIO_010081: HN018_RS28035
subclass of: SO_0000673
so part of: HN018_RS28035
location: 38032..38697
location: region:38032-38697:1
so has part: feature:38032-38697:1:exon

WP_171837201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38032-38697:1:exon

HN018_RS28040
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28040
old locus tag: HN018_28055
so part of: sequence
location: 38687..40330
location: region:38687-40330:1
so has part: feature:38687-40330:1:exon
subclass of: SO_0000010

position:38687:1
position: 38687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40330:1
position: 40330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38687-40330:1:exon

HN018_RS28040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28040
old locus tag: HN018_28055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020070492.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMC family oxidoreductase
translation: MSADPFAAPRGANGRAPDIFSEDGWMPMRQYSEDEAVDFLVIGTGAGGAPLIAGLAEGGFSVVGFDAGPWFRPLEEFASDEQEQNKLYWTDTRVVDGANPMVMGGKNSGKAVGGSTVHFAMVSLRFRPDWFKSRTTLGYGADWPLDWREMWDYYTKAEQALKISGPVVYPWGPKRPRYPYRAHELNSAAELLGRGAEAMGIRWTPTPLATVSAPRGDSPPCVYRGYCRFGCSTNAKQSALVAFVPRAVKAGAEIRDLAMVGRIEVDSSGRATGVHYIREGKWRFQRAHNVIVAGYAVETPRLLLASATDRYRDGLANSSGLVGKNLMTQSNQAVFGTMQQEVRWNKGPPSLSLTEHWNYDDRKDFSGGYCWMAQGPLPVEWVTVQTGSRGLWGQKLIDEMEKYNHQVGLKMVGEMLPDERNTVTLDDEVDQYGLRVARVTYSWGDNDKALIQHALSQMQTSLEAVSATDIFRQENDTNHLGGTARMGNDRRNSVVNADCRSWDIPNLWVCDGSVFPTVGGVNPSLTITAIAMRTVDRIKQMAKRGEL
SIO_010081: HN018_RS28040
subclass of: SO_0000673
so part of: HN018_RS28040
location: 38687..40330
location: region:38687-40330:1
so has part: feature:38687-40330:1:exon

WP_239479500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38687-40330:1:exon

HN018_RS28045
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28045
old locus tag: HN018_28060
pseudo: true
so part of: sequence
location: complement(40542..>41144)
location: region:40542-41144:-1
so has part: feature:40542-41144:-1:exon
subclass of: SO_0000010

position:40542:-1
position: 40542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41144:-1
position: 41144
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40542-41144:-1:exon

HN018_RS28045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28045
old locus tag: HN018_28060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: HN018_RS28045
subclass of: SO_0000673
so part of: HN018_RS28045
location: complement(40542..>41144)
location: region:40542-41144:-1
so has part: feature:40542-41144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40542-41144:-1:exon

HN018_RS28050
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28050
old locus tag: HN018_28065
so part of: sequence
location: 41232..42260
location: region:41232-42260:1
so has part: feature:41232-42260:1:exon
subclass of: SO_0000010

position:41232:1
position: 41232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42260:1
position: 42260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41232-42260:1:exon

HN018_RS28050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28050
old locus tag: HN018_28065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013634994.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQIAVLGIDLGKNSCSVVGLDTTGRVVLKRRLHRDGVLKLAASMPSCVMAMEACCGAHHLGRILRDQGHEVRLMSPEYVRPYVKAQKNDDRDAEAIAEAATRPTMRFVTLKSETQLDMQSLHRARDRLVGERTALINQLRAILLERGIIVPQGRRKMELHLEALLAGEGVGLSARTRLLVDDLRLEWGELDRRIEGFDAEFAAKARTDETARLLTTIPGIGPLNATALAAAIGNAQTFGRGRDLAAWLGLVPKQMTTGGKPKLLGITKRGNGYLRKMLIHGARAALPSLSKGETAMGGWLRGLLARAHVNTVVVALAAKLARIICAVLRSGRKFELTTATVS
SIO_010081: HN018_RS28050
subclass of: SO_0000673
so part of: HN018_RS28050
location: 41232..42260
location: region:41232-42260:1
so has part: feature:41232-42260:1:exon

WP_171837200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41232-42260:1:exon

HN018_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 1484109
locus tag: HN018_RS28055
old locus tag: HN018_28070
so part of: sequence
location: complement(42321..42866)
location: region:42321-42866:-1
so has part: feature:42321-42866:-1:exon
subclass of: SO_0000010

position:42321:-1
position: 42321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42866:-1
position: 42866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42321-42866:-1:exon

HN018_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1484109
locus tag: HN018_RS28055
old locus tag: HN018_28070
inference: COORDINATES: protein motif:HMM:NF024908.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGRTLSQDLRDRVIAAVDGGMSRNAAAARFGVAVATAVRWVRAWRTEGLTTPRPKGGDLRSQRIESYREVILAAIDAQVDITLVELSELLRERNGASFAPSTIWRFLDRHGMTFKNVWPAPSASDLCDPIWSVYANVSGLGTLSRPRWRSARPGPHKNIGVERHFLNQVSRTPINCQAISH
SIO_010081: HN018_RS28055
subclass of: SO_0000673
so part of: HN018_RS28055
location: complement(42321..42866)
location: region:42321-42866:-1
so has part: feature:42321-42866:-1:exon

WP_275434478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42321-42866:-1:exon