Lichenicola cladoniae strain PAMC 26569 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Lichenicola.
Biodiversity and physiological characteristics of Antarctic and Arctic lichens-associated bacteria
Submitted (19-MAY-2020) Division of Polar Life Sciences, Korea Polar Research institute, 26 Songdomirae-ro, Incheon 21990, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP053710.1.\nBacteria and source DNA available from PAMC, Korea Polar Research\nInstitute.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler assembler v. v0.4.8\nAssembly Name :: KOPRI_Lcla_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 516.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 06:14:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,687\nCDSs (total) :: 5,624\nGenes (coding) :: 5,398\nCDSs (with protein) :: 5,398\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 226\nCDSs (without protein) :: 226\nPseudo Genes (ambiguous residues) :: 0 of 226\nPseudo Genes (frameshifted) :: 81 of 226\nPseudo Genes (incomplete) :: 148 of 226\nPseudo Genes (internal stop) :: 71 of 226\nPseudo Genes (multiple problems) :: 63 of 226\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Lichenicola cladoniae Noh et al. 2020
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007424906.1
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014753346.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013635080.1
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008995161.1
COORDINATES: protein motif:HMM:NF025063.2
COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024701.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020714522.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271443.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF037432.2
HEPN/Toprim-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010512535.1
COORDINATES: similar to AA sequence:RefSeq:WP_020408973.1
GO:0008168 - methyltransferase activity [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019462446.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010507163.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF018154.2
COORDINATES: protein motif:HMM:NF024554.2
DUF3991 and TOPRIM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011788482.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067884.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611275.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553267.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012881221.1
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014189972.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907051.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013584213.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_018095834.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012066687.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_012066686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014530284.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394246.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013844801.1
COORDINATES: similar to AA sequence:RefSeq:WP_012066694.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015007869.1
COORDINATES: similar to AA sequence:RefSeq:WP_017879646.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_019859420.1
COORDINATES: protein motif:HMM:NF012517.2
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012255209.1
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_007859593.1
COORDINATES: similar to AA sequence:RefSeq:WP_007969951.1
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: similar to AA sequence:RefSeq:WP_019952140.1
COORDINATES: similar to AA sequence:RefSeq:WP_018247133.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006160761.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612363.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611563.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004545501.1
COORDINATES: similar to AA sequence:RefSeq:WP_015241574.1
COORDINATES: similar to AA sequence:RefSeq:WP_018059818.1
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: similar to AA sequence:RefSeq:WP_006557105.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020179139.1
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: protein motif:HMM:NF015527.2
GO:0008146 - sulfotransferase activity [Evidence IEA]
sulfotransferase family 2 domain-containing protein
COORDINATES: protein motif:HMM:NF016255.2
COORDINATES: similar to AA sequence:RefSeq:WP_011511227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004666649.1
COORDINATES: similar to AA sequence:RefSeq:WP_032490240.1
COORDINATES: similar to AA sequence:RefSeq:WP_008604018.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611363.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014068.2
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020177664.1
COORDINATES: similar to AA sequence:RefSeq:WP_012590829.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012590830.1
COORDINATES: similar to AA sequence:RefSeq:WP_007416914.1
COORDINATES: similar to AA sequence:RefSeq:WP_010509865.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF033563.0
COORDINATES: similar to AA sequence:RefSeq:WP_003219675.1
COORDINATES: similar to AA sequence:RefSeq:WP_013121859.1
COORDINATES: similar to AA sequence:RefSeq:WP_012591964.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010164895.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611908.1
COORDINATES: similar to AA sequence:RefSeq:WP_008078971.1
COORDINATES: similar to AA sequence:RefSeq:WP_015663960.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0052737 - pyruvate dehydrogenase (quinone) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0006090 - pyruvate metabolic process [Evidence IEA]
ubiquinone-dependent pyruvate dehydrogenase
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013946790.1
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:YP_002518339.2
DNA starvation/stationary phase protection protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:TIGR03562.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012409484.1
COORDINATES: similar to AA sequence:RefSeq:WP_012249111.1
COORDINATES: similar to AA sequence:RefSeq:WP_014105940.1
COORDINATES: similar to AA sequence:RefSeq:WP_018269969.1
COORDINATES: similar to AA sequence:RefSeq:WP_009797884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_013588236.1
COORDINATES: similar to AA sequence:RefSeq:WP_009764868.1
COORDINATES: similar to AA sequence:RefSeq:WP_012468524.1
COORDINATES: similar to AA sequence:RefSeq:WP_012779117.1
COORDINATES: similar to AA sequence:RefSeq:WP_018320894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211009.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005849349.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611187.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013566623.1
COORDINATES: similar to AA sequence:RefSeq:WP_038464622.1
COORDINATES: protein motif:HMM:NF033587.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975307.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003601680.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: protein motif:HMM:TIGR00254.1
ligand-binding sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_019461632.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014106103.1
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007005542.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005543.1
COORDINATES: similar to AA sequence:RefSeq:WP_012227543.1
COORDINATES: protein motif:HMM:NF013965.2
COORDINATES: similar to AA sequence:RefSeq:WP_012222370.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009804212.1
COORDINATES: protein motif:HMM:NF025304.2
COORDINATES: protein motif:HMM:TIGR04346.1
COORDINATES: similar to AA sequence:RefSeq:WP_012226833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011578756.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611628.1
COORDINATES: protein motif:HMM:NF021098.2
COORDINATES: similar to AA sequence:RefSeq:WP_014900363.1
COORDINATES: similar to AA sequence:RefSeq:WP_010185429.1
COORDINATES: similar to AA sequence:RefSeq:WP_010160709.1
COORDINATES: similar to AA sequence:RefSeq:WP_010185701.1
COORDINATES: protein motif:HMM:NF025113.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF024997.2
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_026155209.1
COORDINATES: similar to AA sequence:RefSeq:WP_013166747.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013635019.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011540540.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084462.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491865.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611663.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553139.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611653.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611352.1
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015073984.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611555.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435932.1
COORDINATES: similar to AA sequence:RefSeq:WP_020291374.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
Orn/Lys/Arg decarboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011930764.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759260.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010231121.1
pyruvoyl-dependent arginine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_005192514.1
GO:0050126 - N-carbamoylputrescine amidase activity [Evidence IEA]
GO:0009446 - putrescine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007649816.1
GO:0047632 - agmatine deiminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013104.2
COORDINATES: protein motif:HMM:NF024975.2
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: similar to AA sequence:RefSeq:WP_007397215.1
COORDINATES: similar to AA sequence:RefSeq:WP_007206628.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013742035.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010163358.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008839615.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: similar to AA sequence:RefSeq:WP_013268550.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_011388452.1
COORDINATES: similar to AA sequence:RefSeq:WP_013066362.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020174052.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012591980.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: protein motif:HMM:NF020846.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
protease pro-enzyme activation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014006575.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010219556.1
COORDINATES: similar to AA sequence:RefSeq:WP_008505193.1
COORDINATES: similar to AA sequence:RefSeq:WP_006465533.1
COORDINATES: similar to AA sequence:RefSeq:WP_015249125.1
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: similar to AA sequence:RefSeq:WP_020091542.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336471.1
GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO:0019361 - 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase MdcB
COORDINATES: protein motif:HMM:TIGR03135.1
GO:0051191 - prosthetic group biosynthetic process [Evidence IEA]
malonate decarboxylase holo-[acyl-carrier-protein] synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007568074.1
biotin-independent malonate decarboxylase subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_011656479.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0044262 - cellular carbohydrate metabolic process [Evidence IEA]; GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
biotin-independent malonate decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018114150.1
malonate decarboxylase acyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_003601017.1
GO:0015451 - decarboxylation-driven active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_015934309.1
COORDINATES: similar to AA sequence:RefSeq:WP_020177328.1
COORDINATES: protein motif:HMM:NF026057.2
transposase DNA-binding-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012275063.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011930502.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611567.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155942.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012223140.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160101.1
COORDINATES: similar to AA sequence:RefSeq:WP_014559043.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_007423234.1
COORDINATES: similar to AA sequence:RefSeq:WP_007558530.1
COORDINATES: similar to AA sequence:RefSeq:WP_011511042.1
COORDINATES: similar to AA sequence:RefSeq:WP_002715679.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012591343.1
COORDINATES: similar to AA sequence:RefSeq:WP_012227494.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: similar to AA sequence:RefSeq:WP_010507418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012554517.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020176886.1
COORDINATES: similar to AA sequence:RefSeq:WP_020176885.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003224773.1
COORDINATES: protein motif:HMM:NF014715.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004340 - glucokinase activity [Evidence IEA]; GO:0005536 - glucose binding [Evidence IEA]
GO:0051156 - glucose 6-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385217.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_012404787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012245418.1
COORDINATES: similar to AA sequence:RefSeq:WP_011770786.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: similar to AA sequence:RefSeq:WP_008964278.1
COORDINATES: similar to AA sequence:RefSeq:WP_020174772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553994.1
COORDINATES: similar to AA sequence:RefSeq:WP_011482513.1
COORDINATES: similar to AA sequence:RefSeq:WP_008604015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
COORDINATES: similar to AA sequence:RefSeq:WP_020677793.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014626186.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634994.1
COORDINATES: similar to AA sequence:RefSeq:WP_012778787.1
COORDINATES: similar to AA sequence:RefSeq:WP_018455204.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_010163357.1
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: similar to AA sequence:RefSeq:WP_006557132.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611158.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
COORDINATES: similar to AA sequence:RefSeq:WP_008386878.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_012494720.1
GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012591732.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_011662681.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014891826.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_011156506.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_012591736.1
COORDINATES: similar to AA sequence:RefSeq:WP_012591737.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012591738.1
COORDINATES: similar to AA sequence:RefSeq:WP_011765147.1
COORDINATES: similar to AA sequence:RefSeq:WP_020174961.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012591741.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_014402861.1