Lichenicola cladoniae strain PAMC 26569 plasmid unnamed1, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Lichenicola.
Biodiversity and physiological characteristics of Antarctic and Arctic lichens-associated bacteria
Submitted (19-MAY-2020) Division of Polar Life Sciences, Korea Polar Research institute, 26 Songdomirae-ro, Incheon 21990, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP053709.1.\nBacteria and source DNA available from PAMC, Korea Polar Research\nInstitute.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler assembler v. v0.4.8\nAssembly Name :: KOPRI_Lcla_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 516.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 06:14:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,687\nCDSs (total) :: 5,624\nGenes (coding) :: 5,398\nCDSs (with protein) :: 5,398\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 226\nCDSs (without protein) :: 226\nPseudo Genes (ambiguous residues) :: 0 of 226\nPseudo Genes (frameshifted) :: 81 of 226\nPseudo Genes (incomplete) :: 148 of 226\nPseudo Genes (internal stop) :: 71 of 226\nPseudo Genes (multiple problems) :: 63 of 226\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Lichenicola cladoniae Noh et al. 2020
COORDINATES: similar to AA sequence:RefSeq:WP_007158585.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_017978073.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COX aromatic rich motif-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010402679.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007403581.1
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: similar to AA sequence:RefSeq:WP_011439919.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006982169.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007668740.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017118289.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611376.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611158.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611187.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006966249.1
COORDINATES: similar to AA sequence:RefSeq:WP_010186313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_012275061.1
COORDINATES: similar to AA sequence:RefSeq:WP_005849349.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF015642.2
COORDINATES: similar to AA sequence:RefSeq:WP_018270228.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976042.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF016255.2
COORDINATES: similar to AA sequence:RefSeq:WP_007918191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012255371.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018509000.1
COORDINATES: similar to AA sequence:RefSeq:WP_012881221.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553139.1
COORDINATES: similar to AA sequence:RefSeq:WP_011511227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004666649.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611653.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611663.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437421.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382917.1
COORDINATES: similar to AA sequence:RefSeq:WP_003629129.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007424906.1
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: similar to AA sequence:RefSeq:WP_010516759.1
COORDINATES: similar to AA sequence:RefSeq:WP_009764868.1
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242593.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013836303.1
COORDINATES: similar to AA sequence:RefSeq:WP_012468524.1
COORDINATES: similar to AA sequence:RefSeq:WP_012554517.1
COORDINATES: similar to AA sequence:RefSeq:WP_012554884.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_007565333.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008971011.1
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_020174891.1
cytochrome (ubi)quinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_020174890.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_010542800.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012452987.1
COORDINATES: similar to AA sequence:RefSeq:WP_008852456.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018980816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012225036.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008972439.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013700100.1
COORDINATES: similar to AA sequence:RefSeq:WP_018261390.1
COORDINATES: protein motif:HMM:NF024803.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011077905.1
COORDINATES: similar to AA sequence:RefSeq:WP_019092241.1
COORDINATES: protein motif:HMM:NF015255.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011630626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008830442.1
COORDINATES: similar to AA sequence:RefSeq:WP_001262004.1
COORDINATES: protein motif:HMM:NF037136.2
COORDINATES: similar to AA sequence:RefSeq:WP_004113614.1
COORDINATES: similar to AA sequence:RefSeq:WP_018447735.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_015280981.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_018244418.1
COORDINATES: similar to AA sequence:RefSeq:WP_018971951.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011388434.1
COORDINATES: similar to AA sequence:RefSeq:WP_015821561.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018237777.1
COORDINATES: similar to AA sequence:RefSeq:WP_012755583.1
COORDINATES: similar to AA sequence:RefSeq:WP_043767036.1
COORDINATES: similar to AA sequence:RefSeq:WP_010666496.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005543.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005542.1
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014106103.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461632.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
ligand-binding sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_076611490.1
COORDINATES: similar to AA sequence:RefSeq:WP_018700754.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007607994.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014493207.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004107652.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011788482.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067884.1
COORDINATES: similar to AA sequence:RefSeq:WP_016844573.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491865.1
COORDINATES: similar to AA sequence:RefSeq:WP_011084462.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199526.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611329.1
COORDINATES: similar to AA sequence:RefSeq:WP_009802385.1
COORDINATES: protein motif:HMM:NF013206.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_014684156.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019587659.1
COORDINATES: similar to AA sequence:RefSeq:WP_013555234.1
COORDINATES: protein motif:HMM:NF008352.0
COORDINATES: similar to AA sequence:RefSeq:WP_019587657.1
COORDINATES: similar to AA sequence:RefSeq:WP_019587661.1
2-dehydropantoate 2-reductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007253638.1
COORDINATES: similar to AA sequence:RefSeq:WP_019587663.1
COORDINATES: similar to AA sequence:RefSeq:WP_019646643.1
COORDINATES: similar to AA sequence:RefSeq:WP_008877411.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_003627659.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003167762.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007396143.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556050.1
COORDINATES: similar to AA sequence:RefSeq:WP_009805248.1
COORDINATES: similar to AA sequence:RefSeq:WP_019463126.1
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_015931619.1
COORDINATES: protein motif:HMM:NF015340.2
COORDINATES: similar to AA sequence:RefSeq:WP_018389740.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396037.1
COORDINATES: similar to AA sequence:RefSeq:WP_014762509.1
GO:0051304 - chromosome separation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007008655.1
COORDINATES: similar to AA sequence:RefSeq:WP_015072926.1
COORDINATES: similar to AA sequence:RefSeq:WP_008065061.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF025004.2
COORDINATES: protein motif:HMM:NF015366.2
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011494272.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007770189.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_020040247.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013353.2
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008944349.1
COORDINATES: similar to AA sequence:RefSeq:WP_018912209.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF022113.2
LpqB family beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_016482157.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: similar to AA sequence:RefSeq:WP_019013459.1
COORDINATES: similar to AA sequence:RefSeq:WP_019969489.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014332767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012113127.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_003628833.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019514905.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008973952.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF016925.2
COORDINATES: similar to AA sequence:RefSeq:WP_019459299.1
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: similar to AA sequence:RefSeq:WP_019447240.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_012333371.1
COORDINATES: similar to AA sequence:RefSeq:WP_003531330.1
COORDINATES: similar to AA sequence:RefSeq:WP_002803478.1
COORDINATES: similar to AA sequence:RefSeq:WP_008604015.1
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_007917502.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_011979499.1
COORDINATES: protein motif:HMM:NF016670.2
COORDINATES: similar to AA sequence:RefSeq:WP_019462458.1
DUF3991 and toprim domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012384173.1
COORDINATES: similar to AA sequence:RefSeq:WP_019054566.1
COORDINATES: similar to AA sequence:RefSeq:WP_011544395.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967560.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008017157.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012385497.1
COORDINATES: similar to AA sequence:RefSeq:WP_019016453.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: similar to AA sequence:RefSeq:WP_013634863.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382994.1
COORDINATES: protein motif:HMM:TIGR04346.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382998.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382999.1
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_019460417.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460418.1
DotH/IcmK family type IV secretion protein
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: similar to AA sequence:RefSeq:WP_019460421.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460422.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460424.1
COORDINATES: protein motif:HMM:NF028126.2
Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019460426.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019460427.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517045.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460430.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012382851.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018065587.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382857.1
COORDINATES: protein motif:HMM:NF019976.2
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010915960.1
COORDINATES: protein motif:HMM:TIGR02118.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_012279373.1
COORDINATES: protein motif:HMM:NF025713.2
COORDINATES: similar to AA sequence:RefSeq:WP_007425081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011930803.1
COORDINATES: protein motif:HMM:NF025755.2
sugar-transfer associated ATP-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013639361.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_010165160.1
COORDINATES: similar to AA sequence:RefSeq:WP_012226217.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014235295.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013650718.1
COORDINATES: similar to AA sequence:RefSeq:WP_008831884.1
COORDINATES: similar to AA sequence:RefSeq:WP_017503701.1
COORDINATES: protein motif:HMM:NF019370.2
COORDINATES: similar to AA sequence:RefSeq:WP_018268629.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018898766.1
COORDINATES: similar to AA sequence:RefSeq:WP_018065900.1
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: protein motif:HMM:NF024049.2
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: similar to AA sequence:RefSeq:WP_014106038.1
COORDINATES: similar to AA sequence:RefSeq:WP_007396072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012382909.1
COORDINATES: similar to AA sequence:RefSeq:WP_018150255.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052604.1
COORDINATES: similar to AA sequence:RefSeq:WP_015338579.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_076611563.1
COORDINATES: similar to AA sequence:RefSeq:WP_018099234.1
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188732.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611752.1
COORDINATES: protein motif:HMM:TIGR02292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013516321.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_026155209.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010512165.1
COORDINATES: similar to AA sequence:RefSeq:WP_019660552.1
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: similar to AA sequence:RefSeq:WP_013443437.1
COORDINATES: similar to AA sequence:RefSeq:WP_007565557.1
COORDINATES: similar to AA sequence:RefSeq:WP_015244532.1
GO:0015368 - calcium:monoatomic cation antiporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012340188.1
COORDINATES: similar to AA sequence:RefSeq:WP_008965439.1
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: similar to AA sequence:RefSeq:WP_012553362.1
COORDINATES: similar to AA sequence:RefSeq:WP_013634972.1
COORDINATES: similar to AA sequence:RefSeq:WP_011906605.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF033579.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: similar to AA sequence:RefSeq:WP_009476145.1
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009025838.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003590176.1
COORDINATES: similar to AA sequence:RefSeq:WP_007077095.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344847.1
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: similar to AA sequence:RefSeq:WP_010683329.1
COORDINATES: similar to AA sequence:RefSeq:WP_010163241.1
COORDINATES: similar to AA sequence:RefSeq:WP_010183217.1