Micropterus dolomieu mitochondrion, complete genome.
type: Entry
definition: Micropterus dolomieu mitochondrion, complete genome.
sequence version: NC_011361.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_011361.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Micropterus dolomieu (smallmouth bass)
organism: Micropterus dolomieu
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from AB378749.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16488
topology: circular
so has quality: SO_0000988
location: 1..16488
location: region:1-16488:1
RO_0002162: 147949

NC_011361
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial DNA sequences of two haplotypes of the smallmouth bass, Micropterus dolomieu, collected from nonindigenous populations in Japan
author: Mukai, T.
author: Sato, C.
journal: Ichthyol Res 56, 204-207 (2009)

2
title: Direct Submission
journal: Submitted (14-OCT-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Mukai, T.
journal: Submitted (05-FEB-2008) Gifu University, Faculty of Regional Studies; 1-1 Yanagido, Gifu 501-1193, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16488:1
position: 16488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16488:1:source
so part of: sequence
organism: Micropterus dolomieu
organelle: mitochondrion
mol type: genomic DNA
haplotype: n
country: Japan:Ibaraki, Naka River

147949
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Phe
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:region

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 147949
product: 12S ribosomal RNA
so part of: sequence
location: 69..1015
location: region:69-1015:1
so has part: feature:69-1015:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015:1
position: 1015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1015:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Val
so part of: sequence
location: 1016..1087
location: region:1016-1087:1
so has part: feature:1016-1087:1:region

position:1016:1
position: 1016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087:1
position: 1087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016-1087:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 147949
product: 16S ribosomal RNA
so part of: sequence
location: 1088..2778
location: region:1088-2778:1
so has part: feature:1088-2778:1:region

position:1088:1
position: 1088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778:1
position: 2778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088-2778:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2779..2852
location: region:2779-2852:1
so has part: feature:2779-2852:1:region

position:2779:1
position: 2779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852:1
position: 2852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2779-2852:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND1
so part of: sequence
location: 2853..3827
location: region:2853-3827:1
so has part: feature:2853-3827:1:exon
subclass of: SO_0000010

6972979
type: Gene
SIO_000068: ncbigene

position:2853:1
position: 2853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3827:1
position: 3827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853-3827:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MISSLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPILFILTPMLALTLALTLWAPMPLPHPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLNAIIFTGGFTLQTFNVAQESIWLIMPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSATLFLGASHIPAIPELTTINLMTKAALLSVVFLWIRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPPML
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2853..3827
location: region:2853-3827:1
so has part: feature:2853-3827:1:exon

YP_002274332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2853-3827:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Ile
so part of: sequence
location: 3832..3901
location: region:3832-3901:1
so has part: feature:3832-3901:1:region

position:3832:1
position: 3832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3901:1
position: 3901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3832-3901:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Gln
so part of: sequence
location: complement(3901..3971)
location: region:3901-3971:-1
so has part: feature:3901-3971:-1:region

position:3901:-1
position: 3901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3971:-1
position: 3971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3901-3971:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Met
so part of: sequence
location: 3971..4039
location: region:3971-4039:1
so has part: feature:3971-4039:1:region

position:3971:1
position: 3971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4039:1
position: 4039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3971-4039:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND2
so part of: sequence
location: 4040..5086
location: region:4040-5086:1
so has part: feature:4040-5086:1:exon
subclass of: SO_0000010

6972985
type: Gene
SIO_000068: ncbigene

position:4040:1
position: 4040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5086:1
position: 5086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4040-5086:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEMNTLAIIPIMAHLHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWDIQQMSHPLPVTMITLALALKIGLAPVHSWLPEVLQGLDLTTGLILSTWQKLAPFALLLQICPTNSTLLTMLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILILQFSPSLTLLALFTYLIMTFSTFLVFKLNKSTNINALAISWAKAPALTSLTPLILLSLGGLPPLTGFMPKWLILQELTKQELPATATLAALTALLSLYFYLRLSYAMTLTMSPNNLTGTTPWRLPSAQLTLPLALTTTSTLTLLPLTPAITAALSL
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4040..5086
location: region:4040-5086:1
so has part: feature:4040-5086:1:exon

YP_002274333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4040-5086:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Trp
so part of: sequence
location: 5086..5157
location: region:5086-5157:1
so has part: feature:5086-5157:1:region

position:5157:1
position: 5157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5086-5157:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Ala
so part of: sequence
location: complement(5160..5228)
location: region:5160-5228:-1
so has part: feature:5160-5228:-1:region

position:5160:-1
position: 5160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5228:-1
position: 5228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5160-5228:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Asn
so part of: sequence
location: complement(5230..5302)
location: region:5230-5302:-1
so has part: feature:5230-5302:-1:region

position:5230:-1
position: 5230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5302:-1
position: 5302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5230-5302:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Cys
so part of: sequence
location: complement(5340..5406)
location: region:5340-5406:-1
so has part: feature:5340-5406:-1:region

position:5340:-1
position: 5340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5406:-1
position: 5406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5340-5406:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Tyr
so part of: sequence
location: complement(5406..5476)
location: region:5406-5476:-1
so has part: feature:5406-5476:-1:region

position:5476:-1
position: 5476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5406-5476:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: COX1
so part of: sequence
location: 5478..7028
location: region:5478-7028:1
so has part: feature:5478-7028:1:exon
subclass of: SO_0000010

6972986
type: Gene
SIO_000068: ncbigene

position:5478:1
position: 5478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7028:1
position: 7028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5478-7028:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGASIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIVAAFVHWFPLFSGYTLHSTWTKIHFGIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLVAVIMFLFIIWEAFAAKREVLAVELTTTNVEWLHGCPPPYHTFEEPAFVQVQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5478..7028
location: region:5478-7028:1
so has part: feature:5478-7028:1:exon

YP_002274334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5478-7028:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7029..7099)
location: region:7029-7099:-1
so has part: feature:7029-7099:-1:region

position:7029:-1
position: 7029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7099:-1
position: 7099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7029-7099:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Asp
so part of: sequence
location: 7103..7174
location: region:7103-7174:1
so has part: feature:7103-7174:1:region

position:7103:1
position: 7103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7174:1
position: 7174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7103-7174:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: COX2
so part of: sequence
location: 7182..7872
location: region:7182-7872:1
so has part: feature:7182-7872:1:exon
subclass of: SO_0000010

6972982
type: Gene
SIO_000068: ncbigene

position:7182:1
position: 7182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7872:1
position: 7872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7182-7872:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7872,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIVAMVSTKLTNKYILDSQEIEIIWTILPAIILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMIPTQDLTPGQFRLLEADHRMVVPVESPIRVLVSAEDVLHSWAVPALGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7182..7872
location: region:7182-7872:1
so has part: feature:7182-7872:1:exon

YP_002274335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7182-7872:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Lys
so part of: sequence
location: 7873..7946
location: region:7873-7946:1
so has part: feature:7873-7946:1:region

position:7873:1
position: 7873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7946:1
position: 7946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7873-7946:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ATP8
so part of: sequence
location: 7948..8115
location: region:7948-8115:1
so has part: feature:7948-8115:1:exon
subclass of: SO_0000010

6972983
type: Gene
SIO_000068: ncbigene

position:7948:1
position: 7948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8115:1
position: 8115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7948-8115:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFAILVFSWLIFLTVLPPKVLAHTFPNEPSLQSTETPKTEPWNWPWH
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7948..8115
location: region:7948-8115:1
so has part: feature:7948-8115:1:exon

YP_002274336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7948-8115:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ATP6
so part of: sequence
location: 8106..8788
location: region:8106-8788:1
so has part: feature:8106-8788:1:exon
subclass of: SO_0000010

6972981
type: Gene
SIO_000068: ncbigene

position:8106:1
position: 8106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8788:1
position: 8788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8106-8788:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ATP6
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8787..8788,aa:TERM)
transl table: 2
product: ATP synthase F0 subunit 6
translation: MTLSFFDQFMSPTYLGIPLIALALSLPWVLFPTPSSRWLNNRLLTLQGWFMNRFTQQLLLPLSPGGHKWAVLFTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPTLLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8106..8788
location: region:8106-8788:1
so has part: feature:8106-8788:1:exon

YP_002274337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8106-8788:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: COX3
so part of: sequence
location: 8789..9573
location: region:8789-9573:1
so has part: feature:8789-9573:1:exon
subclass of: SO_0000010

6972980
type: Gene
SIO_000068: ncbigene

position:8789:1
position: 8789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9573:1
position: 9573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8789-9573:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9572..9573,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLMTSGLAIWFHFHSTTLLALGLVLLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGITVLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLTLTILLGFYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8789..9573
location: region:8789-9573:1
so has part: feature:8789-9573:1:exon

YP_002274338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8789-9573:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Gly
so part of: sequence
location: 9574..9645
location: region:9574-9645:1
so has part: feature:9574-9645:1:region

position:9574:1
position: 9574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9645:1
position: 9645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9574-9645:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND3
so part of: sequence
location: 9646..9994
location: region:9646-9994:1
so has part: feature:9646-9994:1:exon
subclass of: SO_0000010

6972984
type: Gene
SIO_000068: ncbigene

position:9646:1
position: 9646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9994:1
position: 9994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9646-9994:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9994,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLVTTIICIATALCIILAIVSFWLPQMNPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLTSPLTTFLWASAVLILLTLGLIYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9646..9994
location: region:9646-9994:1
so has part: feature:9646-9994:1:exon

YP_002274339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9646-9994:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Arg
so part of: sequence
location: 9995..10063
location: region:9995-10063:1
so has part: feature:9995-10063:1:region

position:9995:1
position: 9995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10063:1
position: 10063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9995-10063:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND4L
so part of: sequence
location: 10064..10360
location: region:10064-10360:1
so has part: feature:10064-10360:1:exon
subclass of: SO_0000010

6972987
type: Gene
SIO_000068: ncbigene

position:10064:1
position: 10064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10360:1
position: 10360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10064-10360:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFVFSSTFLLGLTGLALHRTHLLSALLCLEGMMLSLFIALSLWTLQLDSTSFSAAPMLLLAFSACEASAGLALLVATARTHGSDRLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10064..10360
location: region:10064-10360:1
so has part: feature:10064-10360:1:exon

YP_002274340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10064-10360:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND4
so part of: sequence
location: 10354..11734
location: region:10354-11734:1
so has part: feature:10354-11734:1:exon
subclass of: SO_0000010

6972989
type: Gene
SIO_000068: ncbigene

position:10354:1
position: 10354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11734:1
position: 11734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10354-11734:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11734,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKVLVPTLMLIPTIWMTPAKWLWPATLLHSLTIALISLTWLKNLLETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTTSEPINRQRMFITLLTSLQAFLIMAFSATEIIMFYVMFEATLIPTLFLITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSLLTLQYSAPLSLTTYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLEPLTKELSYPFIIFALWGVVMTGSICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQIALPLMTSWWFIASLANLALPPLPNLMGELMIITSLFNWSWWTLALTGAGTLITAGYSLYMFLMTQRGPLPTHIIALDPSHSREHLLMALHLLPLLLLILKPELIWGWAA
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10354..11734
location: region:10354-11734:1
so has part: feature:10354-11734:1:exon

YP_002274341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10354-11734:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-His
so part of: sequence
location: 11735..11803
location: region:11735-11803:1
so has part: feature:11735-11803:1:region

position:11735:1
position: 11735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11803:1
position: 11803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11735-11803:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11804..11871
location: region:11804-11871:1
so has part: feature:11804-11871:1:region

position:11804:1
position: 11804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11871:1
position: 11871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11804-11871:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11876..11948
location: region:11876-11948:1
so has part: feature:11876-11948:1:region

position:11876:1
position: 11876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11948:1
position: 11948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11876-11948:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND5
so part of: sequence
location: 11949..13787
location: region:11949-13787:1
so has part: feature:11949-13787:1:exon
subclass of: SO_0000010

6972988
type: Gene
SIO_000068: ncbigene

position:11949:1
position: 11949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13787:1
position: 13787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11949-13787:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHPTSLMMTSSLIIIFFLLAFPVLTTLTPNPQGPSWALFYVKTAVKLAFFTSLLPLALFLNEGAETVITNWSWMNTLTFDINISLKFDLYSVVFTPVALYVTWSILEFASWYMHADPYMNRFFKYLLIFLIAMIILVTANNMFQFFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRVGDIGLIFAMAWMATNFNSWEIQQMFITANNFDLTFPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQMALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALALTLLATSFTAIYSLRIVFFVSMGHPRFNSLSPINENNPAVINPIKRLAWGSIIAGLIITSNITPIKTPVMSMPPLLKLAALIVTIFGLLIALELASLTSKQHQHTPHLTPHHFSNMLGFFPMVFHRLMPKLNLTLGQAIASQLIDQTWLEKTGPKAVASLNTPLVSTTSNIQQGMIKTYLALFLLTLALASLLLAS
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11949..13787
location: region:11949-13787:1
so has part: feature:11949-13787:1:exon

YP_002274342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11949-13787:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: ND6
so part of: sequence
location: complement(13784..14305)
location: region:13784-14305:-1
so has part: feature:13784-14305:-1:exon
subclass of: SO_0000010

6972990
type: Gene
SIO_000068: ncbigene

position:13784:-1
position: 13784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14305:-1
position: 14305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13784-14305:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYIMSLLLIGLVLGLVAVASNPSPYFAALGLVVVAGMGCGVLVGHGGPFLSLVLFLIYLGGMLVVFAYSAALAAEPYPESWGSRPVAAYMVLYAAVVGVVSGFFWGGWYEASWMSVDEFGGFLVVRGDVGGVALMYSAGGGMLVISAWVLLLTLFVVLELTRGLSRGALRVV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13784..14305)
location: region:13784-14305:-1
so has part: feature:13784-14305:-1:exon

YP_002274343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13784-14305:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Glu
so part of: sequence
location: complement(14306..14374)
location: region:14306-14374:-1
so has part: feature:14306-14374:-1:region

position:14306:-1
position: 14306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14374:-1
position: 14374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14306-14374:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 147949
gene: CYTB
so part of: sequence
location: 14379..15519
location: region:14379-15519:1
so has part: feature:14379-15519:1:exon
subclass of: SO_0000010

6972991
type: Gene
SIO_000068: ncbigene

position:14379:1
position: 14379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15519:1
position: 15519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14379-15519:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 147949
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15519,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLATQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNIHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATVIHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAALLIALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPILHTSKQRGLTFRPLTQLLFWALVADVAILTWIGGMPVEHPFVVIGQVASFMYFSLFLFLSPLAGWLENKALEWS
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14379..15519
location: region:14379-15519:1
so has part: feature:14379-15519:1:exon

YP_002274344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14379-15519:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Thr
so part of: sequence
location: 15520..15591
location: region:15520-15591:1
so has part: feature:15520-15591:1:region

position:15520:1
position: 15520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15591:1
position: 15591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15520-15591:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 147949
product: tRNA-Pro
so part of: sequence
location: complement(15591..15660)
location: region:15591-15660:-1
so has part: feature:15591-15660:-1:region

position:15591:-1
position: 15591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15660:-1
position: 15660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15591-15660:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 147949
note: control region
so part of: sequence
location: 15662..16488
location: region:15662-16488:1
so has part: feature:15662-16488:1:region

position:15662:1
position: 15662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15662-16488:1:region