Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus.
Complete genome sequence of Paracoccus yeei TT13 isolated from human skin
Submitted (27-OCT-2017) Bio Health Science, Changwon National University, Changwondaero, Changwon, Gyeongnam 51140, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP024424.1.\nBacteria and source DNA available from Prof Kyoung Lee, Changwon\nNational University.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRTpipe HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 178.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/09/2023 03:30:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,573\nCDSs (total) :: 4,510\nGenes (coding) :: 4,349\nCDSs (with protein) :: 4,349\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 161\nCDSs (without protein) :: 161\nPseudo Genes (ambiguous residues) :: 0 of 161\nPseudo Genes (frameshifted) :: 58 of 161\nPseudo Genes (incomplete) :: 136 of 161\nPseudo Genes (internal stop) :: 18 of 161\nPseudo Genes (multiple problems) :: 46 of 161\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_010398786.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011749186.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007767944.1
COORDINATES: similar to AA sequence:RefSeq:WP_018632215.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_011747948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015458368.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001344.1
COORDINATES: similar to AA sequence:RefSeq:WP_009147842.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008887339.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010546334.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015458547.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001322.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_006725330.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_012978271.1
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_011751322.1
COORDINATES: similar to AA sequence:RefSeq:WP_018116806.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001477.1
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010395408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750786.1
COORDINATES: similar to AA sequence:RefSeq:WP_010096231.1
COORDINATES: similar to AA sequence:RefSeq:WP_006472093.1
COORDINATES: similar to AA sequence:RefSeq:WP_002968376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545792.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012092549.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019994653.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_017927482.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001482.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015344 - siderophore uptake transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
FepA family TonB-dependent siderophore receptor
COORDINATES: similar to AA sequence:RefSeq:WP_010393583.1
COORDINATES: similar to AA sequence:RefSeq:WP_020011781.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004434585.1
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_013319113.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199940.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012091484.1
galactofuranose ABC transporter, galactofuranose-binding protein YtfQ
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010682845.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010397474.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000883.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011747084.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748412.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751256.1
COORDINATES: similar to AA sequence:RefSeq:WP_017999661.1
COORDINATES: similar to AA sequence:RefSeq:WP_014038385.1
COORDINATES: similar to AA sequence:RefSeq:WP_012272226.1
GO:0004673 - protein histidine kinase activity [Evidence IEA]
HWE histidine kinase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009178589.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001167.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018001166.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396423.1
COORDINATES: similar to AA sequence:RefSeq:WP_018322201.1
COORDINATES: protein motif:HMM:NF012422.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011751008.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749695.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007799199.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008332073.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001442.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011570216.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001440.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001439.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750680.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020041971.1
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: similar to AA sequence:RefSeq:WP_018687718.1
COORDINATES: similar to AA sequence:RefSeq:WP_004437639.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428785.1
COORDINATES: similar to AA sequence:RefSeq:WP_007600745.1
COORDINATES: similar to AA sequence:RefSeq:WP_009208007.1
COORDINATES: similar to AA sequence:RefSeq:WP_012649979.1
COORDINATES: similar to AA sequence:RefSeq:WP_006938470.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480358.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011748660.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010397079.1
COORDINATES: similar to AA sequence:RefSeq:WP_015930063.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
putative selenate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013652022.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004582305.1
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_004689976.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747339.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396021.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_009565864.1
GO:0050487 - sulfoacetaldehyde acetyltransferase activity [Evidence IEA]
GO:0019529 - taurine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017998122.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747939.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003532392.1
COORDINATES: similar to AA sequence:RefSeq:WP_036756131.1
taurine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017998126.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015411 - ABC-type taurine transporter transporter activity [Evidence IEA]; GO:0030977 - taurine binding [Evidence IEA]
GO:0015734 - taurine transport [Evidence IEA]
taurine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002724863.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019307376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747021.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018000920.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000919.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000918.1
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF037008.2
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_011493397.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965515.1
COORDINATES: similar to AA sequence:RefSeq:WP_053111714.1
COORDINATES: similar to AA sequence:RefSeq:WP_009573230.1
COORDINATES: similar to AA sequence:RefSeq:WP_014132914.1
COORDINATES: similar to AA sequence:RefSeq:WP_009573232.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517228.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011750493.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018000643.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394645.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394643.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000646.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006815330.1
COORDINATES: similar to AA sequence:RefSeq:WP_014656118.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_014765807.1
COORDINATES: protein motif:HMM:TIGR02588.1
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: similar to AA sequence:RefSeq:WP_020009338.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750610.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002719559.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:YP_002517214.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611844.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011471204.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018259.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025304.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611979.1
COORDINATES: similar to AA sequence:RefSeq:WP_009177859.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396477.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: similar to AA sequence:RefSeq:WP_018000798.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012224168.1
COORDINATES: similar to AA sequence:RefSeq:WP_011508812.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611845.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015931502.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_086558163.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009492350.1
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015918650.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: similar to AA sequence:RefSeq:WP_013383096.1
COORDINATES: similar to AA sequence:RefSeq:WP_013513254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013383099.1
COORDINATES: similar to AA sequence:RefSeq:WP_018062740.1
COORDINATES: similar to AA sequence:RefSeq:WP_018062739.1
COORDINATES: similar to AA sequence:RefSeq:WP_018897746.1
GO:0016151 - nickel cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019862527.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018425739.1
COORDINATES: similar to AA sequence:RefSeq:WP_018897748.1
COORDINATES: similar to AA sequence:RefSeq:WP_008063943.1
GO:0009039 - urease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016346028.1
GO:0035550 - urease complex [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015818623.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003528599.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: similar to AA sequence:RefSeq:WP_013053897.1
GO:0043819 - precorrin-6A synthase (deacetylating) activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008884460.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011337777.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017499814.1
COORDINATES: similar to AA sequence:RefSeq:WP_008071956.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_010668374.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011748816.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009856418.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013833175.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010666161.1
COORDINATES: similar to AA sequence:RefSeq:WP_008031206.1
COORDINATES: similar to AA sequence:RefSeq:WP_019298450.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422877.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007601841.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010396934.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010396932.1
COORDINATES: similar to AA sequence:RefSeq:WP_011339270.1
COORDINATES: similar to AA sequence:RefSeq:WP_013791313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748899.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017928073.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015920434.1
COORDINATES: similar to AA sequence:RefSeq:WP_002719817.1
COORDINATES: similar to AA sequence:RefSeq:WP_009562338.1
COORDINATES: similar to AA sequence:RefSeq:WP_011337643.1
COORDINATES: similar to AA sequence:RefSeq:WP_003530327.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748898.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002723572.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910586.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723577.1
COORDINATES: similar to AA sequence:RefSeq:WP_011339035.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_017968366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748011.1
COORDINATES: similar to AA sequence:RefSeq:WP_010395474.1
COORDINATES: similar to AA sequence:RefSeq:WP_012067080.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_002723937.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483418.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017184162.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020817728.1
COORDINATES: similar to AA sequence:RefSeq:WP_017999529.1
COORDINATES: similar to AA sequence:RefSeq:WP_018641475.1
COORDINATES: similar to AA sequence:RefSeq:WP_019966444.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0005488 - binding [Evidence IEA]
GO:0042918 - alkanesulfonate transport [Evidence IEA]
aliphatic sulfonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011907824.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_017999524.1
GO:0008726 - alkanesulfonate monooxygenase activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
FMNH2-dependent alkanesulfonate monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_018001353.1
COORDINATES: similar to AA sequence:RefSeq:WP_014538212.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885299.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_002965991.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018633648.1
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018633649.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018633650.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007297570.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_009572694.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019567003.1
GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO:0018874 - benzoate metabolic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015921727.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747953.1