Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
Non-Contiguous Finished Genome Sequence of Streptomyces parvulus 2297 Integrated Site-Specifically with Actinophage R4
Submitted (24-MAY-2016) Department of Bioresource Science, Ibaraki University College of Agriculture, 3-21-1 Chuou, Ami 300-0393, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nCP015867.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 253.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 00:02:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,980\nCDSs (total) :: 6,893\nGenes (coding) :: 6,814\nCDSs (with protein) :: 6,814\nGenes (RNA) :: 87\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 66\nncRNAs :: 3\nPseudo Genes (total) :: 79\nCDSs (without protein) :: 79\nPseudo Genes (ambiguous residues) :: 0 of 79\nPseudo Genes (frameshifted) :: 30 of 79\nPseudo Genes (incomplete) :: 60 of 79\nPseudo Genes (internal stop) :: 5 of 79\nPseudo Genes (multiple problems) :: 15 of 79\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007385002.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006132475.1
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011039569.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008735723.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009716301.1
COORDINATES: similar to AA sequence:RefSeq:WP_004936825.1
COORDINATES: similar to AA sequence:RefSeq:WP_016430331.1
LamG-like jellyroll fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015654831.1
COORDINATES: similar to AA sequence:RefSeq:WP_005473972.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: similar to AA sequence:RefSeq:WP_013228023.1
COORDINATES: protein motif:HMM:NF013696.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020635769.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020635768.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014045633.1
COORDINATES: similar to AA sequence:RefSeq:WP_010047405.1
COORDINATES: protein motif:HMM:NF025757.2
BtrH N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019067888.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_020635767.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009191845.1
COORDINATES: similar to AA sequence:RefSeq:WP_008745062.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:TIGR00768.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01902.1
COORDINATES: protein motif:HMM:NF021527.2
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: similar to AA sequence:RefSeq:WP_020635749.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_019067887.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF013166.2
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014790.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: similar to AA sequence:RefSeq:WP_010982391.1
COORDINATES: similar to AA sequence:RefSeq:WP_006764342.1
COORDINATES: protein motif:HMM:NF024589.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011694529.1
COORDINATES: similar to AA sequence:RefSeq:WP_012075133.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: similar to AA sequence:RefSeq:WP_003988597.1
COORDINATES: similar to AA sequence:RefSeq:WP_013283513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020133663.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: similar to AA sequence:RefSeq:WP_007820688.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: similar to AA sequence:RefSeq:WP_010981522.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_012887003.1
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010982133.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007502067.1
COORDINATES: similar to AA sequence:RefSeq:WP_014668731.1
COORDINATES: similar to AA sequence:RefSeq:WP_020124410.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003963347.1
COORDINATES: similar to AA sequence:RefSeq:WP_009192467.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106296.1
COORDINATES: similar to AA sequence:RefSeq:WP_014669152.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_018569291.1
COORDINATES: similar to AA sequence:RefSeq:WP_007387459.1
COORDINATES: similar to AA sequence:RefSeq:WP_018794048.1
COORDINATES: similar to AA sequence:RefSeq:WP_018908478.1
COORDINATES: similar to AA sequence:RefSeq:WP_018961451.1
COORDINATES: similar to AA sequence:RefSeq:WP_018794050.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014058404.1
COORDINATES: similar to AA sequence:RefSeq:WP_018568368.1
COORDINATES: similar to AA sequence:RefSeq:WP_010981855.1
COORDINATES: similar to AA sequence:RefSeq:WP_003102381.1
COORDINATES: similar to AA sequence:RefSeq:WP_019032341.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803621.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020636835.1
COORDINATES: similar to AA sequence:RefSeq:WP_013222554.1
3-dehydroquinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011434898.1
COORDINATES: similar to AA sequence:RefSeq:WP_018808824.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_018501091.1
COORDINATES: similar to AA sequence:RefSeq:WP_013222559.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009740684.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074884.1
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
COORDINATES: similar to AA sequence:RefSeq:WP_009072605.1
COORDINATES: similar to AA sequence:RefSeq:WP_018568646.1
COORDINATES: similar to AA sequence:RefSeq:WP_012181490.1
COORDINATES: similar to AA sequence:RefSeq:WP_008742101.1
COORDINATES: similar to AA sequence:RefSeq:WP_007387429.1
COORDINATES: similar to AA sequence:RefSeq:WP_007387458.1
ScbR family autoregulator-binding transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_018106292.1
COORDINATES: similar to AA sequence:RefSeq:WP_007387457.1
ScbA/BarX family gamma-butyrolactone biosynthesis protein
COORDINATES: protein motif:HMM:NF025192.2
COORDINATES: similar to AA sequence:RefSeq:WP_018548737.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106319.1
AfsR/SARP family transcriptional regulator
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018521819.1
COORDINATES: similar to AA sequence:RefSeq:WP_013005381.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004945519.1
GO:0043880 - crotonyl-CoA reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007269134.1
COORDINATES: similar to AA sequence:RefSeq:WP_005321617.1
COORDINATES: similar to AA sequence:RefSeq:WP_007268976.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106314.1
COORDINATES: similar to AA sequence:RefSeq:WP_007389922.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017604193.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106311.1
COORDINATES: similar to AA sequence:RefSeq:WP_018531583.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106310.1
COORDINATES: similar to AA sequence:RefSeq:WP_011438471.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018106309.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_018106307.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018106306.1
COORDINATES: similar to AA sequence:RefSeq:WP_020207396.1
COORDINATES: similar to AA sequence:RefSeq:WP_012826354.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106304.1
COORDINATES: similar to AA sequence:RefSeq:WP_016435292.1
COORDINATES: similar to AA sequence:RefSeq:WP_003956418.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018539983.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016828647.1
COORDINATES: similar to AA sequence:RefSeq:WP_015575918.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015037176.1
COORDINATES: similar to AA sequence:RefSeq:WP_017601709.1
NDP-hexose 2,3-dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017620940.1
COORDINATES: similar to AA sequence:RefSeq:WP_018722248.1
COORDINATES: similar to AA sequence:RefSeq:WP_007031880.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010315535.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_016467342.1
COORDINATES: similar to AA sequence:RefSeq:WP_019890111.1
FdtA/QdtA family cupin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017601703.1
COORDINATES: protein motif:HMM:TIGR01426.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018819794.1
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: similar to AA sequence:RefSeq:WP_008743411.1
COORDINATES: similar to AA sequence:RefSeq:WP_018819762.1
COORDINATES: similar to AA sequence:RefSeq:WP_016466909.1
COORDINATES: similar to AA sequence:RefSeq:WP_017594891.1
activator-dependent family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018819766.1
COORDINATES: similar to AA sequence:RefSeq:WP_019059441.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018520791.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010468657.1
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: similar to AA sequence:RefSeq:WP_018564326.1
COORDINATES: protein motif:HMM:TIGR01733.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: similar to AA sequence:RefSeq:WP_010359203.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012184561.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_003980916.1
COORDINATES: similar to AA sequence:RefSeq:WP_014173276.1
COORDINATES: similar to AA sequence:RefSeq:WP_018739761.1
COORDINATES: similar to AA sequence:RefSeq:WP_012893402.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007451931.1
COORDINATES: similar to AA sequence:RefSeq:WP_014627964.1
COORDINATES: similar to AA sequence:RefSeq:WP_010072426.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004981608.1
COORDINATES: similar to AA sequence:RefSeq:WP_018519169.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018511408.1
GO:0003824 - catalytic activity [Evidence IEA]
lipopolysaccharide biosynthesis protein RfbH
COORDINATES: similar to AA sequence:RefSeq:WP_019510851.1
COORDINATES: similar to AA sequence:RefSeq:WP_019630019.1
GO:0010126 - mycothiol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006344618.1
lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006344617.1
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006344616.1
COORDINATES: similar to AA sequence:RefSeq:WP_018564285.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006607544.1
COORDINATES: similar to AA sequence:RefSeq:WP_019325166.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_019526146.1
COORDINATES: similar to AA sequence:RefSeq:WP_003960268.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016645359.1
COORDINATES: similar to AA sequence:RefSeq:WP_011856103.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803936.1
COORDINATES: similar to AA sequence:RefSeq:WP_006344615.1
COORDINATES: similar to AA sequence:RefSeq:WP_015580227.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803939.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803940.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803941.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803942.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803943.1
COORDINATES: similar to AA sequence:RefSeq:WP_007301559.1
COORDINATES: similar to AA sequence:RefSeq:WP_020416920.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803945.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803946.1
COORDINATES: similar to AA sequence:RefSeq:WP_018803947.1
COORDINATES: similar to AA sequence:RefSeq:WP_011603717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011603718.1
COORDINATES: similar to AA sequence:RefSeq:WP_016638480.1
COORDINATES: similar to AA sequence:RefSeq:WP_011603720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011603721.1
COORDINATES: similar to AA sequence:RefSeq:WP_010638157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014054390.1
COORDINATES: similar to AA sequence:RefSeq:WP_018521702.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019330797.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031217.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016473333.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009314436.1
COORDINATES: similar to AA sequence:RefSeq:WP_014673386.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018524344.1
COORDINATES: similar to AA sequence:RefSeq:WP_014151941.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011727834.1
COORDINATES: similar to AA sequence:RefSeq:WP_018786807.1
COORDINATES: similar to AA sequence:RefSeq:WP_019330856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004993135.1
COORDINATES: similar to AA sequence:RefSeq:WP_003993924.1
COORDINATES: similar to AA sequence:RefSeq:WP_006383470.1
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018839198.1
COORDINATES: similar to AA sequence:RefSeq:WP_014668814.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031862.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003971410.1
COORDINATES: similar to AA sequence:RefSeq:WP_006129520.1
COORDINATES: similar to AA sequence:RefSeq:WP_008355213.1
COORDINATES: similar to AA sequence:RefSeq:WP_012923154.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677111.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014677110.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_005249211.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009189323.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011020875.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011039495.1
COORDINATES: similar to AA sequence:RefSeq:WP_020103330.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF028235.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018514297.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003954166.1
muconolactone Delta-isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007295968.1
COORDINATES: similar to AA sequence:RefSeq:WP_015655004.1
COORDINATES: similar to AA sequence:RefSeq:WP_020139625.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015034039.1
COORDINATES: similar to AA sequence:RefSeq:WP_020419248.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018562143.1
COORDINATES: similar to AA sequence:RefSeq:WP_014669038.1
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019072756.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014676342.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020129493.1
GO:0070273 - phosphatidylinositol-4-phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009187271.1
COORDINATES: similar to AA sequence:RefSeq:WP_014668997.1
COORDINATES: similar to AA sequence:RefSeq:WP_014173038.1
COORDINATES: similar to AA sequence:RefSeq:WP_018562116.1
COORDINATES: similar to AA sequence:RefSeq:WP_014447508.1
COORDINATES: similar to AA sequence:RefSeq:WP_018104782.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_007379539.1
COORDINATES: similar to AA sequence:RefSeq:WP_015655016.1
COORDINATES: protein motif:HMM:NF013124.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009712572.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014141242.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016909954.1
COORDINATES: similar to AA sequence:RefSeq:WP_014669050.1
COORDINATES: similar to AA sequence:RefSeq:WP_020140422.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010982962.1
COORDINATES: similar to AA sequence:RefSeq:WP_010982106.1
COORDINATES: similar to AA sequence:RefSeq:WP_019060904.1
COORDINATES: similar to AA sequence:RefSeq:WP_010355132.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015493145.1
COORDINATES: similar to AA sequence:RefSeq:WP_018557691.1
COORDINATES: similar to AA sequence:RefSeq:WP_018561090.1
COORDINATES: similar to AA sequence:RefSeq:WP_006141554.1
COORDINATES: similar to AA sequence:RefSeq:WP_018557852.1
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF025292.2
lipocalin-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009478433.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009478434.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_009281305.1
COORDINATES: similar to AA sequence:RefSeq:WP_003983758.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007389208.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_016430410.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031702.1
glycogen debranching N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003971650.1
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003971651.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019527306.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031697.1
COORDINATES: similar to AA sequence:RefSeq:WP_003971654.1
COORDINATES: similar to AA sequence:RefSeq:WP_009069117.1
COORDINATES: similar to AA sequence:RefSeq:WP_018468180.1
COORDINATES: similar to AA sequence:RefSeq:WP_010048717.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: similar to AA sequence:RefSeq:WP_012890771.1
COORDINATES: similar to AA sequence:RefSeq:WP_019876909.1
SsgA family sporulation/cell division regulator
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_012887147.1
COORDINATES: similar to AA sequence:RefSeq:WP_018557853.1
COORDINATES: similar to AA sequence:RefSeq:WP_018557850.1
COORDINATES: similar to AA sequence:RefSeq:WP_010358763.1
COORDINATES: similar to AA sequence:RefSeq:WP_010358764.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003269731.1
COORDINATES: similar to AA sequence:RefSeq:WP_020707980.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523574.1
COORDINATES: similar to AA sequence:RefSeq:WP_007830368.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018557656.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011027111.1
COORDINATES: similar to AA sequence:RefSeq:WP_005319054.1
COORDINATES: similar to AA sequence:RefSeq:WP_018558305.1
COORDINATES: similar to AA sequence:RefSeq:WP_018558304.1
COORDINATES: similar to AA sequence:RefSeq:WP_010352702.1
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003971964.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018562812.1
COORDINATES: similar to AA sequence:RefSeq:WP_006138329.1
COORDINATES: similar to AA sequence:RefSeq:WP_018961231.1
COORDINATES: similar to AA sequence:RefSeq:WP_019526901.1
COORDINATES: similar to AA sequence:RefSeq:WP_006137015.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009192191.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_018563905.1
COORDINATES: similar to AA sequence:RefSeq:WP_018381738.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018852526.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569321.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013225363.1
COORDINATES: similar to AA sequence:RefSeq:WP_018560861.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584548.1
COORDINATES: similar to AA sequence:RefSeq:WP_019634312.1
COORDINATES: similar to AA sequence:RefSeq:WP_007461787.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012919991.1
COORDINATES: similar to AA sequence:RefSeq:WP_011292354.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004978842.1
COORDINATES: similar to AA sequence:RefSeq:WP_019063575.1
COORDINATES: similar to AA sequence:RefSeq:WP_018563804.1
COORDINATES: similar to AA sequence:RefSeq:WP_018564480.1
COORDINATES: similar to AA sequence:RefSeq:WP_018562244.1
COORDINATES: similar to AA sequence:RefSeq:WP_018562245.1
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019074368.1
COORDINATES: similar to AA sequence:RefSeq:WP_012786622.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010352407.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018563694.1
COORDINATES: protein motif:HMM:NF019473.2
limonene-1,2-epoxide hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013422419.1
COORDINATES: similar to AA sequence:RefSeq:WP_015038095.1
COORDINATES: similar to AA sequence:RefSeq:WP_018558675.1
COORDINATES: similar to AA sequence:RefSeq:WP_019891614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007386767.1
COORDINATES: similar to AA sequence:RefSeq:WP_003079586.1
COORDINATES: similar to AA sequence:RefSeq:WP_003952958.1
COORDINATES: protein motif:HMM:NF038083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014676322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014059091.1
COORDINATES: similar to AA sequence:RefSeq:WP_015034479.1
COORDINATES: similar to AA sequence:RefSeq:WP_019532063.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034096.1
COORDINATES: similar to AA sequence:RefSeq:WP_014047606.1
COORDINATES: similar to AA sequence:RefSeq:WP_015579069.1
COORDINATES: similar to AA sequence:RefSeq:WP_018385580.1
COORDINATES: protein motif:HMM:NF012388.2
GO:0030598 - rRNA N-glycosylase activity [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003975062.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558197.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015575524.1
COORDINATES: similar to AA sequence:RefSeq:WP_007386802.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611377.1
COORDINATES: protein motif:HMM:NF019334.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009998931.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377534.1
COORDINATES: similar to AA sequence:RefSeq:WP_006126498.1
COORDINATES: similar to AA sequence:RefSeq:WP_015506760.1
COORDINATES: similar to AA sequence:RefSeq:WP_010986898.1
COORDINATES: similar to AA sequence:RefSeq:WP_020118798.1
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018547780.1
COORDINATES: similar to AA sequence:RefSeq:WP_014144264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677469.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039392.1
COORDINATES: similar to AA sequence:RefSeq:WP_010064744.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039393.1
COORDINATES: protein motif:HMM:NF013727.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020135859.1
bifunctional lytic transglycosylase/C40 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_010039251.1
COORDINATES: similar to AA sequence:RefSeq:WP_008734493.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109709.1
RRQRL motif-containing zinc-binding protein
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_018554993.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988911.1
COORDINATES: similar to AA sequence:RefSeq:WP_010279902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039370.1
COORDINATES: similar to AA sequence:RefSeq:WP_014674333.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039334.1
COORDINATES: similar to AA sequence:RefSeq:WP_007446618.1
COORDINATES: similar to AA sequence:RefSeq:WP_018961019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109744.1
COORDINATES: similar to AA sequence:RefSeq:WP_020135006.1
COORDINATES: similar to AA sequence:RefSeq:WP_018893073.1
COORDINATES: similar to AA sequence:RefSeq:WP_004993633.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329412.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522993.1
COORDINATES: similar to AA sequence:RefSeq:WP_016435023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677570.1
COORDINATES: protein motif:HMM:NF027613.2
COORDINATES: similar to AA sequence:RefSeq:WP_015663151.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043470.1
COORDINATES: similar to AA sequence:RefSeq:WP_011031890.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_010636464.1
COORDINATES: protein motif:HMM:TIGR04474.1