Mycolicibacterium boenickei strain JCM 15653 plasmid pJCM15653, complete sequence.
type: Entry
definition: Mycolicibacterium boenickei strain JCM 15653 plasmid pJCM15653, complete sequence.
sequence version: NZ_AP022580.1
sequence date: 2022-12-17
sequence: sequence
division: CON
label: NZ_AP022580.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00153197
keyword: RefSeq
source: Mycolicibacterium boenickei (Mycobacterium boenickei)
organism: Mycolicibacterium boenickei
taxonomy: Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycolicibacterium.
reference: 1
references: 31287781
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP022580.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.7\nGenome Coverage :: 165x\nSequencing Technology :: Oxford Nanopore Technologies MinION;\n Illumina HiSeq2500\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/15/2022 00:23:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,351\nCDSs (total) :: 6,291\nGenes (coding) :: 6,234\nCDSs (with protein) :: 6,234\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 57\nCDSs (without protein) :: 57\nPseudo Genes (ambiguous residues) :: 0 of 57\nPseudo Genes (frameshifted) :: 27 of 57\nPseudo Genes (incomplete) :: 37 of 57\nPseudo Genes (internal stop) :: 2 of 57\nPseudo Genes (multiple problems) :: 8 of 57\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 21984
topology: circular
so has quality: SO_0000988
location: 1..21984
location: region:1-21984:1
RO_0002162: 146017

NZ_AP022580
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00153197
type: BioSample
SIO_000068: biosample

1
title: Comprehensive subspecies identification of 175 nontuberculous mycobacteria species based on 7547 genomic profiles
author: Matsumoto, Y.
author: Kinjo, T.
author: Motooka, D.
author: Nabeya, D.
author: Jung, N.
author: Uechi, K.
author: Horii, T.
author: Iida, T.
author: Fujita, J.
author: Nakamura, S.
journal: Emerg Microbes Infect
volume: 8
issue: 1
pages: 1043-1053
year: 2019
pubmed: 31287781

31287781
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Matsumoto, Y.
author: Motooka, D.
author: Nakamura, S.
journal: Submitted (05-FEB-2020) Contact:Yuki Matsumoto Research Institute for Microbial Diseases, Osaka University, Department of infection metagenomics; Yamadaoka 3-1, Suita, Osaka 565-0871, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21984:1
position: 21984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21984:1:source
so part of: sequence
organism: Mycolicibacterium boenickei
mol type: genomic DNA
strain: JCM 15653
culture collection: JCM:15653
type material: type strain of Mycolicibacterium boenickei
plasmid: pJCM15653

146017
type: Taxonomy
SIO_000068: taxonomy

G6N57_RS31485
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31485
so part of: sequence
location: complement(join(21885..21984,1..119))
location: region:1-21984:-1
so has part: feature:1-119:-1:exon
so has part: feature:21885-21984:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21984:-1
position: 21984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-119:-1:exon

position:119:-1
position: 119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21885-21984:-1:exon

position:21885:-1
position: 21885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G6N57_RS31485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASPAQPAQAHPTIEHLIDEYTDWKAVLDRDSDDFGTIAKLVTLYRFAIANYSNPLAELLLDAIAAMEAGES
SIO_010081: G6N57_RS31485
subclass of: SO_0000673
so part of: G6N57_RS31485
location: complement(join(21885..21984,1..119))
location: region:1-21984:-1
so has part: feature:1-119:-1:exon
so has part: feature:21885-21984:-1:exon

WP_077743984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21885-21984:-1:exon

G6N57_RS31490
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31490
old locus tag: MBOE_63340
so part of: sequence
location: 241..1515
location: region:241-1515:1
so has part: feature:241-1515:1:exon
subclass of: SO_0000010

position:241:1
position: 241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515:1
position: 1515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241-1515:1:exon

G6N57_RS31490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31490
old locus tag: MBOE_63340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014805399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MSDDTATDWDQDDHPDYDLVQDVLLDPDHELANPDSYPRMWNLSAGMAFFEAVIRPDIPERPEFVPIFMPGIASADRDTYGARIFSIARWNSLWEAAQYRRRFFSDDTDPDASDWERLPADLARIAELGDNNIVFIPRTKTRYYDYAPLFHLLPRATLDRFGLPLLHAGQWPFWAELVNPDPYLPADFHQRLTDAWGATVWRHLMPSSPISRFTKDDPIRILAHNLDFWIPAVAEAMEDEMRTWPIVDTGITPGPVTLSNGELLEGATMGGPRKGSDIWSGEHEAAEFVERTVEAADHTGQLRDILDAVRSHRAHDDFSDRWSHAKEDFERKLNHTRSRVKVTFIELDDTTPVHGPETEIVGQLACSDFLTLLNPKDREVVVVLRTGVTSLTEVGNILGYSNHSAVSKRLTRIRKQAARYFNDN
SIO_010081: G6N57_RS31490
subclass of: SO_0000673
so part of: G6N57_RS31490
location: 241..1515
location: region:241-1515:1
so has part: feature:241-1515:1:exon

WP_234815896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241-1515:1:exon

G6N57_RS32165
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS32165
old locus tag: MBOE_63350
so part of: sequence
location: complement(1960..2217)
location: region:1960-2217:-1
so has part: feature:1960-2217:-1:exon
subclass of: SO_0000010

position:1960:-1
position: 1960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217:-1
position: 2217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960-2217:-1:exon

G6N57_RS32165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS32165
old locus tag: MBOE_63350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHTTQAGPETLLIIDRDDTLVSFDNQQLIEFTRRAGCRDTLRYEHRSDKTELLLGIPDAIAWCWGKGGGWRQLIRPAITGIYEL
SIO_010081: G6N57_RS32165
subclass of: SO_0000673
so part of: G6N57_RS32165
location: complement(1960..2217)
location: region:1960-2217:-1
so has part: feature:1960-2217:-1:exon

WP_234815895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1960-2217:-1:exon

G6N57_RS31500
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31500
old locus tag: MBOE_63370
so part of: sequence
location: complement(2755..2955)
location: region:2755-2955:-1
so has part: feature:2755-2955:-1:exon
subclass of: SO_0000010

position:2755:-1
position: 2755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955:-1
position: 2955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2755-2955:-1:exon

G6N57_RS31500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31500
old locus tag: MBOE_63370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006244020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPGVVVLLAVLLLAVLVSAGYMVMCAYIAKVTGSTAGLADIGNAAGLTAGFSALAVVIRLGRWWR
SIO_010081: G6N57_RS31500
subclass of: SO_0000673
so part of: G6N57_RS31500
location: complement(2755..2955)
location: region:2755-2955:-1
so has part: feature:2755-2955:-1:exon

WP_133118406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2755-2955:-1:exon

G6N57_RS31505
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31505
old locus tag: MBOE_63380
so part of: sequence
location: 3377..4024
location: region:3377-4024:1
so has part: feature:3377-4024:1:exon
subclass of: SO_0000010

position:3377:1
position: 3377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4024:1
position: 4024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3377-4024:1:exon

G6N57_RS31505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31505
old locus tag: MBOE_63380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016892183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSPAITIAVANLKGGSTKTTSAAYALHALEEAGLPAIGVDADGENESLLSWSEAGEWSIPVIGMPVADLHRKLPGIVDDRYDAVVIDTPPMKERLGVVASAIRLATHILVPMAPTGIEYARLPAIRTAVEDAAELRSGPPPELAVVFTRTVPNAASTDVYRQMIIDDGLRVLGPTVGRLERYAQAYGLPIKNAAASAYGDIVAELLATPTELLNS
SIO_010081: G6N57_RS31505
subclass of: SO_0000673
so part of: G6N57_RS31505
location: 3377..4024
location: region:3377-4024:1
so has part: feature:3377-4024:1:exon

WP_097926524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3377-4024:1:exon

G6N57_RS31510
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31510
old locus tag: MBOE_63390
so part of: sequence
location: 4079..4444
location: region:4079-4444:1
so has part: feature:4079-4444:1:exon
subclass of: SO_0000010

position:4079:1
position: 4079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4444:1
position: 4444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4079-4444:1:exon

G6N57_RS31510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31510
old locus tag: MBOE_63390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019737021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTAADRIRANATRIKTQAPQAPLTTADPAPEAPAPAQATTPAEPAPAPVNRPVVRQKSIRRTVDLTPAQHRALDVWQRETADNLGLARVTGQDVLAALVDQLLASPELGAQITRTIQARQ
SIO_010081: G6N57_RS31510
subclass of: SO_0000673
so part of: G6N57_RS31510
location: 4079..4444
location: region:4079-4444:1
so has part: feature:4079-4444:1:exon

WP_174814604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4079-4444:1:exon

G6N57_RS31515
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31515
old locus tag: MBOE_63410
so part of: sequence
location: 4824..5168
location: region:4824-5168:1
so has part: feature:4824-5168:1:exon
subclass of: SO_0000010

position:4824:1
position: 4824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168:1
position: 5168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4824-5168:1:exon

G6N57_RS31515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31515
old locus tag: MBOE_63410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006243939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADQISAGQITALLHRAQLNPEQWDLSEIVRKANAWITDNLNELSHMGASWSPEDRAAHLAEFGNLTAIDFIEQCVIEAGPGTAPWQDLQHRVDAGEFDTWPPIWLAQRAIDVC
SIO_010081: G6N57_RS31515
subclass of: SO_0000673
so part of: G6N57_RS31515
location: 4824..5168
location: region:4824-5168:1
so has part: feature:4824-5168:1:exon

WP_077743997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4824-5168:1:exon

G6N57_RS31520
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31520
old locus tag: MBOE_63420
so part of: sequence
location: 5215..5478
location: region:5215-5478:1
so has part: feature:5215-5478:1:exon
subclass of: SO_0000010

position:5215:1
position: 5215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5478:1
position: 5478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5215-5478:1:exon

G6N57_RS31520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31520
old locus tag: MBOE_63420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADQDRDEPRPGQWVRYDQLERKEARLRPDQYGRLSGISRSLNRTRAGRGERITENTLIRVAIDLLLQREADLAGDTEVELRRSLGL
SIO_010081: G6N57_RS31520
subclass of: SO_0000673
so part of: G6N57_RS31520
location: 5215..5478
location: region:5215-5478:1
so has part: feature:5215-5478:1:exon

WP_077743996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5215-5478:1:exon

G6N57_RS31525
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31525
old locus tag: MBOE_63430
so part of: sequence
location: 5533..5967
location: region:5533-5967:1
so has part: feature:5533-5967:1:exon
subclass of: SO_0000010

position:5533:1
position: 5533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5967:1
position: 5967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5533-5967:1:exon

G6N57_RS31525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31525
old locus tag: MBOE_63430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPDEFLTAATANIRAFNDATSMAQLFDRALTADEAYGILDATEVLVQLMPRALIRLSLAVGQSLAVSSTDDAATDGAVAPLAVAAMHMAQAAHFISEASENIDPLLADVLDDTDDGEAHQWRGFVAVVRGWTRTRRGHQAAA
SIO_010081: G6N57_RS31525
subclass of: SO_0000673
so part of: G6N57_RS31525
location: 5533..5967
location: region:5533-5967:1
so has part: feature:5533-5967:1:exon

WP_077743995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5533-5967:1:exon

G6N57_RS31530
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31530
old locus tag: MBOE_63440
so part of: sequence
location: 6127..6507
location: region:6127-6507:1
so has part: feature:6127-6507:1:exon
subclass of: SO_0000010

position:6127:1
position: 6127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6507:1
position: 6507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6127-6507:1:exon

G6N57_RS31530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31530
old locus tag: MBOE_63440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTATLPVTVLTAAAAAAADHGIDRSALLTDIVCFHYGRPDLMRHLPQQLLFESQHPTTAAADDAIGPHAKVRLPLPIAALVERDHQQLGMQRSTYLADIICRHMGFPHLVRELDKGFEKEVLPLAI
SIO_010081: G6N57_RS31530
subclass of: SO_0000673
so part of: G6N57_RS31530
location: 6127..6507
location: region:6127-6507:1
so has part: feature:6127-6507:1:exon

WP_077743994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6127-6507:1:exon

G6N57_RS31535
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31535
old locus tag: MBOE_63450
so part of: sequence
location: 6856..8202
location: region:6856-8202:1
so has part: feature:6856-8202:1:exon
subclass of: SO_0000010

position:6856:1
position: 6856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8202:1
position: 8202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6856-8202:1:exon

G6N57_RS31535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31535
old locus tag: MBOE_63450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIVAGIFRRYDDGSAALGDLSARGCSAGGASPSRPANIGEQARRPYNGSSRTKRRRGAIRTRPRANARLRRRAARKPVPREHVWLDSELVYLELPEGAHKGVPCWTGGADYWVHITVATAYAAHYNEIRPRMSNGGIGRKALLTIAAARARYADHATGRNCRPTVAQLAADTGLSERQVQRCNEALILLGVATEILRGRQRTLTERLASWRVGDRGRGWASVWVLHDSTWLARVIHKMSPHLGGSLLSSKSSLLPQLTTEKRSPKGSRGCGARRRTSPDPGGSALARSWRADRHSPSWAQRHSADAWAALLAAPARHGWTARDLNQLITDWLGITGRTIPGAPHKPIGLLGAILAWHGTDNLDDRPAAAEEAREAEERAAAAARVARARQAIEVTPPRGPNSGGAGRLAARAVALEAARNAARKRTEETARQTAQLDAAVRRARGLQT
SIO_010081: G6N57_RS31535
subclass of: SO_0000673
so part of: G6N57_RS31535
location: 6856..8202
location: region:6856-8202:1
so has part: feature:6856-8202:1:exon

WP_234815898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6856-8202:1:exon

G6N57_RS31540
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31540
old locus tag: MBOE_63460
so part of: sequence
location: complement(8222..8671)
location: region:8222-8671:-1
so has part: feature:8222-8671:-1:exon
subclass of: SO_0000010

position:8222:-1
position: 8222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8671:-1
position: 8671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8222-8671:-1:exon

G6N57_RS31540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31540
old locus tag: MBOE_63460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKVGKAWVYLVDDSTGVVYHDVEIHPSGVLRASNRASQEVTNVGTVQGETKAVYYAPHAWTRVEPVRHRDLTVWVSDVEMQRTDPEWRQLASCVGRDNVNALAMQYLRDSYGDRDDLVKVVEEAFDGGTKFGSANGDRTVRFACYRLE
SIO_010081: G6N57_RS31540
subclass of: SO_0000673
so part of: G6N57_RS31540
location: complement(8222..8671)
location: region:8222-8671:-1
so has part: feature:8222-8671:-1:exon

WP_077743993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8222-8671:-1:exon

G6N57_RS31545
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31545
old locus tag: MBOE_63470
so part of: sequence
location: 8939..14374
location: region:8939-14374:1
so has part: feature:8939-14374:1:exon
subclass of: SO_0000010

position:8939:1
position: 8939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14374:1
position: 14374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8939-14374:1:exon

G6N57_RS31545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31545
old locus tag: MBOE_63470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative relaxase TrwC/TraI family protein
translation: MGLHKLSAGDGYLYLIRQVAASDDTHRGKPSLADYYSEKGESPGRWMGSGLAGLGAPAGRDAADPMVAELWSVPEGSEVTEDQMKALFGEGLHPNADRITQRLTGFGLGHEGAIAAARLGRPFRVNKTDNDWMRRLREGYADFNTTLGRDRQASLEPEERARIRTAVGREMFTETYGRAPADERELTGFVARKSRAQTQAVAGYDLTFTPVKSVSALWAIAPHDIAAKIEKAHHRAVADAIAFLEEHAAFSRTGTNGVAQVDTTGFIAAAFDHRDSRAGDPCLHTHVAISNKCMVIGADGVPRWLALDGQPLHKATVAASELYNTRLEAHLMAALGVEFAETRTKTGKRPVREIDGIPVELIERWSSRRAAVEHRVGELAKAFQDEHHREPTAVEILALSQQATLETRQAKHEPRSRGEQRQSWRTEAVEVLGSHRELARLITDVTARSVRRRPVAITGEWVTEQAESVIKAVSHDRSTWGVNHVRAEAHRLLRQVGRQGDIEALDRIVKTALDECSIALSTHVDTEMNEPVALRRRDGASVYTRHDSAVYTSEAIRAAERRILDAAALGGGRVADDTSIGLAMLEAHAQHGLQLNAGQEALVRGMATSGARLQLALAPAGTGKTTAMSVLAAAWTNSGGNVIGLAPTAGAAEVLANDAHITTDTMAKFVQLAGTEQDRSARRDPARKWFNAIGPDTLLIVDEAGMASTFDLDEMITHAKAKGAKVCLVADDQQLASISAGGIITDLASRPETLTLSTVVRFRDPAQSAASLAIRDGDPAGIAYYIDHGRVHVGADQTAADMAYKAWADDIAAGHRSVLLAPTNDLVAQLNERARLDRLRTSPKPSATVTLSDGLTASTGDWIITRKNARGLRMRNGTWVKNGHRWVIKSAHRDGSVTAYRLGSDPKTGTIRLPADYVAANTTLGYASTINAAQGITAGTQKNKGTCHIVGTDHLTRQQLYVAATRAKDENHVYFSTSEADPHRILAPKATQQPTAVDILTAILRRDGRQVSAHTAAHAETDPFQRLHGLASMYADALATGAEHLAGTDTMARIDQAATAIASDITDAEAWPVLRRNLALLALDGHDPIAALQHAAAKPLGNAVDVAAVLDWRLPTPAGTSLGTVGPLRWLPAIPAALRDEPAWGQYLTARAQGVTECAAQIRDTAQQWTQATAPAWARRLIAKQPGLTAEIAVFRAAHDVDAADTRLTGPGQHANRSAAVQKLIHDNVEVAITREHNSTQRWRPLVATLDPHILSDPYWPRLATYLDDAAQDGADVSAMLVTAMATGGPLPDELPAAALWWRLSTTAVVFDREAPAVDHDQTQAPTPALQVGQPVDIPALRRRRDQARQRVRALEHAILHQNAGPAEQAAAAEIAALTTRHQQQRPYHHAYVHAQADWVRAQLGAETHHRLLDQLTHQLNAAQTAGNTALDDLYSSSRDYLARHTPDIEAAVEHAQQHREAAYAELLDAAGGPEGIVTERDIQQRRSVALTADAQALREARAEATTLDNQLFRAEAAAARAFATHPGKDYDMTAELPSLQTEVEFLEAAGARSPNAGYEVPQVALEQLDDDHRRVVVAIAGSLETVQSLHLEPDADKVSVLGALAQAAHRGNYQGDRRVLAIPASDRAQRYAAQHRYADTTASPAEARDNLGAGRWKLPEATLIVIDDADHLQPEQLRWLTEHADQTRTKLLLVTHTEASVKTVAQERRQPPPSRELTDALRAHLPWHQHLGNGETVTAAQTPPTAIDRARTHLETTSTTASSAGTEHQAQAKQLLQRVDQLTANFQYRATDHRAHDLDRAQQRSHGLEL
SIO_010081: G6N57_RS31545
subclass of: SO_0000673
so part of: G6N57_RS31545
location: 8939..14374
location: region:8939-14374:1
so has part: feature:8939-14374:1:exon

WP_097926525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8939-14374:1:exon

G6N57_RS31550
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31550
old locus tag: MBOE_63480
so part of: sequence
location: 14407..14805
location: region:14407-14805:1
so has part: feature:14407-14805:1:exon
subclass of: SO_0000010

position:14407:1
position: 14407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14805:1
position: 14805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14407-14805:1:exon

G6N57_RS31550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31550
old locus tag: MBOE_63480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGTPFSEEFAQALDLAAQYHQLREDFDTDLRSDRRESRRVFWGLPLNDKPTMSWGAASAARSEQLGSIVKEYGELWYQIQAVAPALAGVLPFPWLMRTGNRLPGWSERISRRRAGNSWFVTPKAYKPSTAV
SIO_010081: G6N57_RS31550
subclass of: SO_0000673
so part of: G6N57_RS31550
location: 14407..14805
location: region:14407-14805:1
so has part: feature:14407-14805:1:exon

WP_133118409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14407-14805:1:exon

G6N57_RS32170
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS32170
old locus tag: MBOE_63490
so part of: sequence
location: complement(14817..17195)
location: region:14817-17195:-1
so has part: feature:14817-17195:-1:exon
subclass of: SO_0000010

position:14817:-1
position: 14817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17195:-1
position: 17195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14817-17195:-1:exon

G6N57_RS32170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS32170
old locus tag: MBOE_63490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVVSRPVPSPFPDPPKEDPDKWIAHQLVRQIVAAQPAADNFAPHKGVPCGQDIQLRPGAYTYALIAPGEWPTDSETALKAAGEELTARSRRTEDAAEESNRLSTSVFNDPCTDGKWADAASAHYQKQHKALLRLSEAQAAVGAGYTTLGEDVRTIKQKIREEHDTAHAKIERTLRFQAMSGGPVGVAAIVAEHRPKISAFATELRGHVATQTGTLLKDFPETPQFDGDPRKGTGIGKDLPTDGSSGKKDDLNPPGTGAKKDLPTTGQSPAGSTETGNGIGKALPSAGIGSSQPSPSSSPGRPSLPSLPAAGGGSGSSPLSGAASGGMGGPLSGLLGGGPASGVAGGVGSPASSVQGQTARAMQASMGGEFGRGLAAGANAAGTMPISPPSQPMPPQSPASPLAAPMGGSAPPVAAPATTSAPVASAAPAPTASGGAIGAPGGGPGGQMTSYGSVLPPGPAAGAGPVAGSGAMPAGSAAPPPPVGGGAGAGPGFVPVGGSNGGARPVPRDVSLSDLERARAVVADLAAASSAVHPGLGWAVGVARGASGVPEFWIASNEGASYVPAGVHVSRTMPTVGGLDAGFDAQWFGWFNPAETVFRALRAREYSVSAIATTFMSRSELIDEAVRDIAVGVGPSGGPEDAEASQPLQSRSHRLETVAPGLFQELSAADPAAVDSYARHVVGQTVFNAGPELSNSAQAVARAIISGRWPADEQWSALRQEYCSAVLMAGSQRPGIIGLEDEHQLLIYQQDFVVCRRLETVVCWEHDSPADVVYAAWQAGVRVPFELLDRV
SIO_010081: G6N57_RS32170
subclass of: SO_0000673
so part of: G6N57_RS32170
location: complement(14817..17195)
location: region:14817-17195:-1
so has part: feature:14817-17195:-1:exon

WP_234815900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14817-17195:-1:exon

G6N57_RS31560
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31560
old locus tag: MBOE_63500
so part of: sequence
location: complement(17195..17659)
location: region:17195-17659:-1
so has part: feature:17195-17659:-1:exon
subclass of: SO_0000010

position:17659:-1
position: 17659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17195-17659:-1:exon

G6N57_RS31560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31560
old locus tag: MBOE_63500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAIAATGAITYALSHGGDSQLTPSTEPALTGPSGSSAPTPTYSQAEQAAAKEKLCHVFEVSVRGQEGQGGVVVNGEPNIGLILRTVNSVVAVQNKTNPAVPESLKAAVQKYVETSTDLTTAALGKTPIDELTRLTEVNNEATYVLADECGVPR
SIO_010081: G6N57_RS31560
subclass of: SO_0000673
so part of: G6N57_RS31560
location: complement(17195..17659)
location: region:17195-17659:-1
so has part: feature:17195-17659:-1:exon

WP_077743990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17195-17659:-1:exon

G6N57_RS31565
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31565
old locus tag: MBOE_63510
so part of: sequence
location: complement(17841..18116)
location: region:17841-18116:-1
so has part: feature:17841-18116:-1:exon
subclass of: SO_0000010

position:17841:-1
position: 17841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18116:-1
position: 18116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17841-18116:-1:exon

G6N57_RS31565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31565
old locus tag: MBOE_63510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAANVFGMDAENTRTGLGAAGLAAQAGVAAGLAPALPKGAYTAVYTGAAETLLAKLEAEASALVEFGLVTSAASVTTVESAENQNARELGT
SIO_010081: G6N57_RS31565
subclass of: SO_0000673
so part of: G6N57_RS31565
location: complement(17841..18116)
location: region:17841-18116:-1
so has part: feature:17841-18116:-1:exon

WP_077743989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17841-18116:-1:exon

G6N57_RS31570
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31570
old locus tag: MBOE_63520
so part of: sequence
location: complement(18119..19033)
location: region:18119-19033:-1
so has part: feature:18119-19033:-1:exon
subclass of: SO_0000010

position:18119:-1
position: 18119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19033:-1
position: 19033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18119-19033:-1:exon

G6N57_RS31570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31570
old locus tag: MBOE_63520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEGDCAAHPQPECAGCRARDQAAARMISSTMWWLVSDRWPIEIPPDPPAGLREAWFASDAERFGDEWESWTGGLGKSIRSTRSEVRDLQHIIHSFVGTSLERMDEALPPESAELAVMKAVTGWLTGEIGVPAAVAAVWADRDGKRTWAEWDEWLWEQLRAVPTERLWPATHAPASTPASWSYWELVVSSVVGQATSAHPGSGEENQAAHVMRARAALRAAVTLNDEAAMWQAWSWWLRCSLMALDKRRARASWEQYAETLPAALHAMAKVEPTEQAEVAALTFELGAAHGYDLYLPPDPPKEQ
SIO_010081: G6N57_RS31570
subclass of: SO_0000673
so part of: G6N57_RS31570
location: complement(18119..19033)
location: region:18119-19033:-1
so has part: feature:18119-19033:-1:exon

WP_220098786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18119-19033:-1:exon

G6N57_RS31575
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31575
old locus tag: MBOE_63530
so part of: sequence
location: 19293..20351
location: region:19293-20351:1
so has part: feature:19293-20351:1:exon
subclass of: SO_0000010

position:19293:1
position: 19293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20351:1
position: 20351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19293-20351:1:exon

G6N57_RS31575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31575
old locus tag: MBOE_63530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATAAQYQARAVDRIHEILSTEHAVVRREVESRISEGYWQSSGENIDPHHVSNALRYLTDELGELEWVSATTRGKGKRPVPTLQPVNRSGRATKIDKAAARKRLLYGRYQGWASGTQRHPHGLIGPAGEAATRGGILASEVVIPIASDAGEVPNVLGVAVPGPLDSAGFIVPINHQGVPGAAVTLLFEVKNLRQWIYPSAPELYQLLSKAVTVQQARPDAPILPILVCRRAHPTLFWMASQLGFIAIPMDRQFIGPHIEESKYLEVHNELHFNDLTPTSGPSLRVRDRLKGAVRKNCTNFAQTWQRTANDPQISAALLQLPHTKDRQDRAALAETIKDLVVENGWGDGWPVG
SIO_010081: G6N57_RS31575
subclass of: SO_0000673
so part of: G6N57_RS31575
location: 19293..20351
location: region:19293-20351:1
so has part: feature:19293-20351:1:exon

WP_133118407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19293-20351:1:exon

G6N57_RS32175
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS32175
so part of: sequence
location: 20708..21001
location: region:20708-21001:1
so has part: feature:20708-21001:1:exon
subclass of: SO_0000010

position:20708:1
position: 20708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21001:1
position: 21001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20708-21001:1:exon

G6N57_RS32175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS32175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEERAYWRVQSRVTTRLFLCPTTGRALSVGTPHKEVNMVISTAWNLVWILLVLAMVNRAVFCRRDEPMKRIVAFLSGLAKAAAAAATVILALVQILP
SIO_010081: G6N57_RS32175
subclass of: SO_0000673
so part of: G6N57_RS32175
location: 20708..21001
location: region:20708-21001:1
so has part: feature:20708-21001:1:exon

WP_234815897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20708-21001:1:exon

G6N57_RS31585
type: Gene
subclass of: SO_0000704
RO_0002162: 146017
locus tag: G6N57_RS31585
old locus tag: MBOE_63550
so part of: sequence
location: 21319..21888
location: region:21319-21888:1
so has part: feature:21319-21888:1:exon
subclass of: SO_0000010

position:21319:1
position: 21319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21888:1
position: 21888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21319-21888:1:exon

G6N57_RS31585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 146017
locus tag: G6N57_RS31585
old locus tag: MBOE_63550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAVILGYARVSTTGQDIDAQLATLAAAGVEGDRIYTDKLSGAANTARPGLAALLDYARDGDTVIVTAIDRLGRSVAEVTRTIAELSERRILLRAMREGIDTNTPTGRAVAAIMATLAELELELGKERRAASRQSRQARNLPATKPHKLSPARQEQLRRLAATGEPVGELAAAFGVGRATAYRYLAAATD
SIO_010081: G6N57_RS31585
subclass of: SO_0000673
so part of: G6N57_RS31585
location: 21319..21888
location: region:21319-21888:1
so has part: feature:21319-21888:1:exon

WP_077743985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21319-21888:1:exon