Octadecabacter temperatus strain SB1 plasmid OSB_p1, complete sequence.
type: Entry
definition: Octadecabacter temperatus strain SB1 plasmid OSB_p1, complete sequence.
sequence version: NZ_CP012161.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NZ_CP012161.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03891579
keyword: RefSeq
source: Octadecabacter temperatus
organism: Octadecabacter temperatus
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Octadecabacter.
reference: 1
references: 26358607
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012161.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: mira v. 3.4.0; SPAdes v. 2.5.0\nGenome Coverage :: 158x\nSequencing Technology :: 454; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 01:52:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,295\nCDSs (total) :: 3,250\nGenes (coding) :: 3,227\nCDSs (with protein) :: 3,227\nGenes (RNA) :: 45\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 39\nncRNAs :: 3\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 9 of 23\nPseudo Genes (incomplete) :: 12 of 23\nPseudo Genes (internal stop) :: 6 of 23\nPseudo Genes (multiple problems) :: 3 of 23\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 31560
topology: circular
so has quality: SO_0000988
location: 1..31560
location: region:1-31560:1
RO_0002162: 1458307

NZ_CP012161
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03891579
type: BioSample
SIO_000068: biosample

1
title: Closed Genome Sequence of Octadecabacter temperatus SB1, the First Mesophilic Species of the Genus Octadecabacter
author: Voget, S.
author: Billerbeck, S.
author: Simon, M.
author: Daniel, R.
journal: Genome Announc 3 (5), e01051-15 (2015)
pubmed: 26358607
comments: Publication Status: Online-Only

26358607
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Voget, S.
author: Billerbeck, S.
author: Simon, M.
author: Daniel, R.
journal: Submitted (27-JUL-2015) Genomic and Applied Microbiology and Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen 37077, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31560:1
position: 31560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31560:1:source
so part of: sequence
organism: Octadecabacter temperatus
mol type: genomic DNA
strain: SB1
isolation source: surface water of the southern North Sea
culture collection: DSM:26878
type material: type strain of Octadecabacter temperatus
plasmid: OSB_p1
country: Germany: Helgoland harbor
lat lon: 54.188 N 7.898 E
collection date: 2010-09-24
collected by: Sara Billerbeck, ICBM Oldenburg, Germany

1458307
type: Taxonomy
SIO_000068: taxonomy

OSB_RS16260
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: repA
locus tag: OSB_RS16260
old locus tag: OSB_33100
so part of: sequence
location: 102..1283
location: region:102-1283:1
so has part: feature:102-1283:1:exon
subclass of: SO_0000010

position:102:1
position: 102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283:1
position: 1283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102-1283:1:exon

OSB_RS16260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: repA
locus tag: OSB_RS16260
old locus tag: OSB_33100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015493462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MFQTAPISAASQSEVTEQMAERLKTALTTHLQQVYAPDQRKSLRGFSATETAELLGVSGQFLRKGHSEGTLPEPAVNKGGRRSYSGDEIWAMRQSLEAGSRTKGKYLPGRREDDKLQVIQLMNFKGGSAKSTATIHLCHYLALNGYRVLAIDLDPQGSLTGFCGLQTELEFDGPTIYDALRYEAPLPLSDVIVDTYFPGLDLAPARLILSEFETETAVNAGRGAAFFERLSDALAPVEGDYDVVIIDSPPALGFLTLTGLFAATSVLVPMTPSMLDLASTQQFIEMTSAYLGVIEDTGVRMDHDFFSFLITRDDPSDIPSQQIVSLMRALFQDRIIPSTALRSTAIADASMLKMSIYEVARSDMTRSTYDRARTSMDAVGADIANLVQKAWGR
SIO_010081: OSB_RS16260
subclass of: SO_0000673
so part of: OSB_RS16260
location: 102..1283
location: region:102-1283:1
so has part: feature:102-1283:1:exon

WP_049836225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102-1283:1:exon

OSB_RS16265
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: repB
locus tag: OSB_RS16265
old locus tag: OSB_33110
so part of: sequence
location: 1286..2266
location: region:1286-2266:1
so has part: feature:1286-2266:1:exon
subclass of: SO_0000010

position:1286:1
position: 1286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266:1
position: 2266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286-2266:1:exon

OSB_RS16265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: repB
locus tag: OSB_RS16265
old locus tag: OSB_33110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015493463.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MALDKNKAGIMAAITAATEGVAPKQTQKSTRAHRTLPKGTVGSVRAGLGGIQEIDTALILPWGPQDRLELTAVNTDEADDVQDLVESIRTSGQQVPVLLRPAADRDGKFEVVYGRRRTLACQELGIPVKALIRTLDDREALMAKGLENASRQDLSFYERARFAQAILDQGHTREEAQQALSISKNTLSQLERVARLIPDLVGVKIGPAPGAGRPKWMALAAAFDAGQINEDSAFRLLATQDIETPSDARLEAVLNSLSKRGAAEARAVERSPVAGTAVKSTGSSVTLTVKRAGQNKAFAEWFDDNIDRLLKESYQTFKNEAGGEGG
SIO_010081: OSB_RS16265
subclass of: SO_0000673
so part of: OSB_RS16265
location: 1286..2266
location: region:1286-2266:1
so has part: feature:1286-2266:1:exon

WP_049836226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1286-2266:1:exon

OSB_RS16270
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: repC
locus tag: OSB_RS16270
old locus tag: OSB_33120
so part of: sequence
location: 2474..3808
location: region:2474-3808:1
so has part: feature:2474-3808:1:exon
subclass of: SO_0000010

position:2474:1
position: 2474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3808:1
position: 3808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2474-3808:1:exon

OSB_RS16270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: repC
locus tag: OSB_RS16270
old locus tag: OSB_33120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015493464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MNPPQGATGPVGYQHGLSMLSGWRKPSPGLGIAEQLASEGERLAVPKSRAFVAVKRVGAHIGLKAGDMMLLDTLGAFTQAQDWEESRRPIVWASNAYLMEQTGFSLSALKRHARRLAEAGAISFQDSPNGKRWGRRDAEGVIIEAYGFDLSPLSARVDEFEQLHAELQTERALCQRLKRQITVTRRMIRARIEAALSGALKGPWVQFTGAFEDLLDRLPRRKEASEHLMGLLTWFKDLQQRVEAAYLLAAQPIQAVENLTETTGQVSNMTQDMDPIGVNTDPHILTTKQLDSVTCSSSETEEAASVVPNAQPEDQVDSELEEWVAETRKKRGAAVDLPTVMQACPEFASWAHNIGGFLKDWSDLHRVAGQLRPMIGISEHAWNVAQDRLGPQIATAALVLVFEKHSAGEVASPGGYLRGMVEKAGAGELNLERSFYGRLNGLAA
SIO_010081: OSB_RS16270
subclass of: SO_0000673
so part of: OSB_RS16270
location: 2474..3808
location: region:2474-3808:1
so has part: feature:2474-3808:1:exon

WP_234967442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2474-3808:1:exon

OSB_RS16275
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16275
old locus tag: OSB_33130
so part of: sequence
location: 4137..5882
location: region:4137-5882:1
so has part: feature:4137-5882:1:exon
subclass of: SO_0000010

position:4137:1
position: 4137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5882:1
position: 5882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4137-5882:1:exon

OSB_RS16275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16275
old locus tag: OSB_33130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005854405.1
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate sugar epimerase/dehydratase
translation: MEWISADWPIWLIALAVSPFVVVFCRLPWIKLSTLDFRGALRIAAAAGILAIVASLASYALSIGSPRSIPGIFAVSFFALSFFGRVIATLCLQRIAGTRRGTPVAIFGAGAAGIQLSSALRQSPEVEPVCFVDDDPSYRGLNIAGLRVHSRDQLKRMVENGQVSRVLIAIPSMDQSGISRIVEDLGELGVEIQVLPSFVDLISGRSKELKLVAPEALLGREKVNLDLPVVAKSYAGRSVMVTGAGGSIGSELCKQLLECNPERIVLFEQSEFALYEIEAAMRAGAASKNIEVVARLGSVCDRNRVDEVLQAQEVEIILHAAAYKHVPLIEENEVEGARNNILGTRTLALAARAAGIERFILVSTDKAVRPTNIMGATKRLAELVLQDLASRSDKTRFSMVRFGNVLGSSGSVLPLFQKQIRHGGPVTVTHPDVTRFFMTIPEASRLVLLAGAYSKGGDVFVLDMGKPMRIIDIARRMIELSGSTVKSPSNPGGIDVVVTGLRPGEKLYEELLIDDSLLTETPHEMILRAEQEKLSEIMTKRMLKGFEAAVAAADAEEIRKLVMEYASGYHIPDHEAPASVS
SIO_010081: OSB_RS16275
subclass of: SO_0000673
so part of: OSB_RS16275
location: 4137..5882
location: region:4137-5882:1
so has part: feature:4137-5882:1:exon

WP_234967443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4137-5882:1:exon

OSB_RS16280
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16280
old locus tag: OSB_33140
so part of: sequence
location: complement(5985..8774)
location: region:5985-8774:-1
so has part: feature:5985-8774:-1:exon
subclass of: SO_0000010

position:5985:-1
position: 5985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8774:-1
position: 8774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5985-8774:-1:exon

OSB_RS16280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16280
old locus tag: OSB_33140
EC number: 4.2.1.3
EC number: 4.2.1.99
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887564.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
translation: MSLYAAYLEEIETRKKQDLSPKPIDGAELTQEIIAQIKDAGHAHRDASLNFLIYNTLPGTTGAAGVKAQFLKDIILGATEVPEISAEFAFEMLSHMKGGPSVDVLLDLALGDDAAIAGQASDVLQTQFFLYDADMDRLKAAFEAGNTVAREILESYAKAEFFTKLPDIDEEVEVVTFVAGEGDISTDLLSPGNQAHSRADRELHGKCMIDEAAQKHIQDLKLQHPNARVMLIAEKGTMGVGSSRMSGVNNVALWTGKQASPYVPFVNFAPVVAGTNGISPIFLTTVGVTGGIGVDLKNWVKKTDEDGNPILNNDGNAILEEKYSVATGTVLKINTKDKKLYSEEGDELVDMSSSFTPQKMEFMKAGGSYAIVFGKKLQTFAAETLGVEAPLVFAPSKEISHEGQGLTAVEKIFTANARGVAPGTVLHAGSDVRVGVNIVGSQDTTGLMTMQELEAMAATTVSPSVDGAYQSGCHTASVWDFKAQENTPRLMKFMNDFGLVTGRDPKGEYHAMTDVIHKVLNDVTVSDWDVIIGGDSHTRMSKGVAFGADSGTVALALATGEASMPIPESVKVTFKGQMADHMDFRDVVHATQMQMLDQHGDNVFQGRVIEVHIGTLLADQAFTFTDWTAEMKAKASVCISNDETLIGSLELAKSRIQIMIDKGMEHDNGTLASLIAKADKRIAEIRSGEKPALQPDGNAKYFAEVVVDLDTIVEPMIADPDVNNADVSKRYTHDTIRPISFYKAEKHVDLGFVGSCMVHKGDIKIVAQMLRNLEAENGKVSFEAPLVVTAPTYNIIDELKDEGDWAILQKYCGFEFDDTAPKQTARTEYENILYLERPGCNLCMGNQEKAAKGDTVLATSTRLFQGRVVADSAEKKGESLLASTPVVVLSAILGRTPTLDEYKQAVDGIDLTKFAPPIEKPAGTKSAHF
SIO_010081: OSB_RS16280
subclass of: SO_0000673
so part of: OSB_RS16280
location: complement(5985..8774)
location: region:5985-8774:-1
so has part: feature:5985-8774:-1:exon

WP_049836228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5985-8774:-1:exon

OSB_RS16285
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16285
old locus tag: OSB_33150
so part of: sequence
location: 9707..10819
location: region:9707-10819:1
so has part: feature:9707-10819:1:exon
subclass of: SO_0000010

position:9707:1
position: 9707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10819:1
position: 10819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9707-10819:1:exon

OSB_RS16285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16285
old locus tag: OSB_33150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009159821.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis/export family protein
translation: MLRLLICFCAMALLTACDWIPRGAGLQSEVLATSRDRDAETVPNFAIEVVTRSNLATFVSWPAADTAHYHWIDRVDQPNTRTIQSGDTLRITIWTTENDGLLTGPGQRSVTLPDTRVSSSGRVFLPYIGDFRVNGMSPNTARARIEEAYMGAIPSAQVQLEMAEGRGQSVSLIGGVNQPGSFALPDNDFSILQLLADGGGISTGLLNPQVRLHRNGRIYGVSAERLLDTPRLDTTLVGGDKIYVEADERTFLSLGAAGTEAVHPFPTDQVSALEALSIIGGVSDTRADAKGILILRRYPVAQITEDRTGPDHPRTVFTLDLTSADGLFSADQFEIQSGDLIYVTESPVTAASSVFGLIGSVLGLNNAITN
SIO_010081: OSB_RS16285
subclass of: SO_0000673
so part of: OSB_RS16285
location: 9707..10819
location: region:9707-10819:1
so has part: feature:9707-10819:1:exon

WP_049836229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9707-10819:1:exon

OSB_RS16295
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16295
old locus tag: OSB_33170
so part of: sequence
location: 11509..12105
location: region:11509-12105:1
so has part: feature:11509-12105:1:exon
subclass of: SO_0000010

position:11509:1
position: 11509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12105:1
position: 12105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11509-12105:1:exon

OSB_RS16295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16295
old locus tag: OSB_33170
inference: COORDINATES: protein motif:HMM:NF040319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MITSKILQRVKGKGRGAIFAPSDLLDLGSRASVDQTLSRLTDQGVIRRLTRGLYDYPKISARFGMVQPSVYDVARVIARKDHYVLLMSQAAAANQFGLSTQVPSKPTYITDGPTRTRTVGRQVIQFRNASRKTLTGAGQTSGAVFQALRFVGKDGVTDRVINKLAAALSDKDCDLLVKQSRDVPAWMKPVVQQIAAHV
SIO_010081: OSB_RS16295
subclass of: SO_0000673
so part of: OSB_RS16295
location: 11509..12105
location: region:11509-12105:1
so has part: feature:11509-12105:1:exon

WP_049836231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11509-12105:1:exon

OSB_RS16300
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16300
old locus tag: OSB_33180
so part of: sequence
location: 12405..12647
location: region:12405-12647:1
so has part: feature:12405-12647:1:exon
subclass of: SO_0000010

position:12405:1
position: 12405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12647:1
position: 12647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12405-12647:1:exon

OSB_RS16300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16300
old locus tag: OSB_33180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006728090.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MATMNVSLPEQMKSWVEQQSEGGRFSNSSDYVRDLIRRDQERGVRIAELQAAIDAGLNSGPAKTFDPAVFKRKMHQARDQ
SIO_010081: OSB_RS16300
subclass of: SO_0000673
so part of: OSB_RS16300
location: 12405..12647
location: region:12405-12647:1
so has part: feature:12405-12647:1:exon

WP_049836232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12405-12647:1:exon

OSB_RS16310
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16310
old locus tag: OSB_33200
so part of: sequence
location: 12959..13174
location: region:12959-13174:1
so has part: feature:12959-13174:1:exon
subclass of: SO_0000010

position:12959:1
position: 12959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13174:1
position: 13174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12959-13174:1:exon

OSB_RS16310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16310
old locus tag: OSB_33200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MHLTKINPELNVNRFYHLEILPGLFGDWGLVRNWGRTGSNGQLRTDWFATKGEAKDARFALHMKKAKRGYE
SIO_010081: OSB_RS16310
subclass of: SO_0000673
so part of: OSB_RS16310
location: 12959..13174
location: region:12959-13174:1
so has part: feature:12959-13174:1:exon

WP_049836234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12959-13174:1:exon

OSB_RS16315
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16315
old locus tag: OSB_33210
pseudo: true
so part of: sequence
location: complement(<13396..13680)
location: region:13396-13680:-1
so has part: feature:13396-13680:-1:exon
subclass of: SO_0000010

position:13396:-1
position: 13396
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:13680:-1
position: 13680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13396-13680:-1:exon

OSB_RS16315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16315
old locus tag: OSB_33210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611865.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: OSB_RS16315
subclass of: SO_0000673
so part of: OSB_RS16315
location: complement(<13396..13680)
location: region:13396-13680:-1
so has part: feature:13396-13680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13396-13680:-1:exon

OSB_RS16320
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16320
old locus tag: OSB_33220
so part of: sequence
location: complement(14079..14684)
location: region:14079-14684:-1
so has part: feature:14079-14684:-1:exon
subclass of: SO_0000010

position:14079:-1
position: 14079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14684:-1
position: 14684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14079-14684:-1:exon

OSB_RS16320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16320
old locus tag: OSB_33220
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009159725.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0006486 - protein glycosylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MTPSKRLLDLICAIGLSIVLTPVIILTMVLVTLLDGRPVFYISERMKSQTEGFSLIKFRTMKVVDEDSGVSGGDKSDRITNTGAFLRRTRLDEVPQLFNVLCGDISLIGPRPPLRQYVERFPETYSQVLKSRPGISGLASIYFHSHEEYLLAKATTLEETDMIYSRVCIPRKARLDLIYQKKRTICLDVSLMFKSVFKSLR
SIO_010081: OSB_RS16320
subclass of: SO_0000673
so part of: OSB_RS16320
location: complement(14079..14684)
location: region:14079-14684:-1
so has part: feature:14079-14684:-1:exon

WP_049836235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14079-14684:-1:exon

OSB_RS16325
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16325
old locus tag: OSB_33230
so part of: sequence
location: complement(14681..15514)
location: region:14681-15514:-1
so has part: feature:14681-15514:-1:exon
subclass of: SO_0000010

position:14681:-1
position: 14681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15514:-1
position: 15514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14681-15514:-1:exon

OSB_RS16325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16325
old locus tag: OSB_33230
inference: COORDINATES: protein motif:HMM:NF013530.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MGGTGRVGQMVLHHWNFVLPSAVQVIEQHRDPARSTGIHWCLTKKPKETLDSFDIDAIVCLAGVTPGPNADLLLNTPLASTVMREASRAGIKRVLLASSSAVYGAGDGTPFNESSPTNPINEYGKAKLEMEQSCAHWREEGLEVCCLRIGNVAGADALLLNVAGSTSNQPLHIDRFADGRGPVRSYIGPKTLAEVLYSLATHKGQLPETLNIAAPKVVYMEELAHAANHPFDLCSAQEGSHQSITLDCDALSTFHAFDTDASEATQMVAQWKEATSR
SIO_010081: OSB_RS16325
subclass of: SO_0000673
so part of: OSB_RS16325
location: complement(14681..15514)
location: region:14681-15514:-1
so has part: feature:14681-15514:-1:exon

WP_268794165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14681-15514:-1:exon

OSB_RS16330
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16330
old locus tag: OSB_33240
so part of: sequence
location: complement(15602..16270)
location: region:15602-16270:-1
so has part: feature:15602-16270:-1:exon
subclass of: SO_0000010

position:15602:-1
position: 15602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16270:-1
position: 16270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15602-16270:-1:exon

OSB_RS16330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16330
old locus tag: OSB_33240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008279688.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIRIENLSKSFATKSVRKVIVENLTAEFPTGSSVALLGRNGAGKSTLLQLLAGTIRPDRGRVLSTGSISYPVGFAGSFSPDMTGLQNARFVARLYGVDTDELVDFVEDFAELGPHFNMPFRSYSSGMRSRLSFGVSMAIPFDTYLVDEVTSVGDGAFREKSMQVFERRRETSSAIVVTHSPRMVREICDSGAVLEGGKLHLYDDLETALEHHNRALRAPLKA
SIO_010081: OSB_RS16330
subclass of: SO_0000673
so part of: OSB_RS16330
location: complement(15602..16270)
location: region:15602-16270:-1
so has part: feature:15602-16270:-1:exon

WP_049836249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15602-16270:-1:exon

OSB_RS16335
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16335
old locus tag: OSB_33250
so part of: sequence
location: complement(16278..17306)
location: region:16278-17306:-1
so has part: feature:16278-17306:-1:exon
subclass of: SO_0000010

position:16278:-1
position: 16278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17306:-1
position: 17306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16278-17306:-1:exon

OSB_RS16335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16335
old locus tag: OSB_33250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009816556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTYAADQYASKLAFSVRSEEQSSAIELLGGITELSGSSSTDTDVLYAFLNSQELVSRVNERVDLESIWSRVSIEQDPLYAYDPGGTIEDLVNHWSRKVSVIYDSGTSLIEIRVLAFDPHEAQRIANAVLAECTVMINNLSTIAREDAIRYSRDDLEIASARLREARQSLTLFRNRTQIVDPSIDTQNQMGLLVTLQQQLADAMIEGDLLRDTTSTSDPRLEQADRRVEVINQRIEEERQKLGLGGGAEGAVVFADLVGEYEGLIVDREFAEVAYTTALAGFNGAQAEARRQSRYLAAHIQPSLAQKAEHPERIKLILFVALFSFLSWCVLALVYYSLRDRS
SIO_010081: OSB_RS16335
subclass of: SO_0000673
so part of: OSB_RS16335
location: complement(16278..17306)
location: region:16278-17306:-1
so has part: feature:16278-17306:-1:exon

WP_049836250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16278-17306:-1:exon

OSB_RS16340
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16340
old locus tag: OSB_33260
so part of: sequence
location: 17737..18477
location: region:17737-18477:1
so has part: feature:17737-18477:1:exon
subclass of: SO_0000010

position:17737:1
position: 17737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18477:1
position: 18477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17737-18477:1:exon

OSB_RS16340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16340
old locus tag: OSB_33260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008279690.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFALVLREISTTYGRSAGGYIWAVLEPAAGVVLLTIIFSIGFKSPPLGSDFAYFYASGLLAFTMYADISAKLGQSIQFSQRLLSYPRVTFVDALLARLLLNTLTQLIIHLIVMTFVVLISSADVSIDMSKLVIGYAMVIVLSAGIGTLNSFLSLAYPIWATAWAVLSRPLFIASCIFFVFDAVPQPYNDYLWYNPLVHIIGMMRDGYYPYYQPNYVSVVYVFVVGLTTLCIGLFFLNRYHRDIILK
SIO_010081: OSB_RS16340
subclass of: SO_0000673
so part of: OSB_RS16340
location: 17737..18477
location: region:17737-18477:1
so has part: feature:17737-18477:1:exon

WP_268794166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17737-18477:1:exon

OSB_RS16345
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16345
old locus tag: OSB_33270
so part of: sequence
location: complement(18495..20594)
location: region:18495-20594:-1
so has part: feature:18495-20594:-1:exon
subclass of: SO_0000010

position:18495:-1
position: 18495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20594:-1
position: 20594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18495-20594:-1:exon

OSB_RS16345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16345
old locus tag: OSB_33270
inference: COORDINATES: protein motif:HMM:NF020137.2
GO component: GO:0005615 - extracellular space [Evidence IEA]
GO function: GO:0005509 - calcium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M10 family metallopeptidase C-terminal domain-containing protein
translation: MCIICEIQRQPVETDYTNNKLCNASNNEPLQAVVSEDPDASEDTLTGFEMIVGDTFNGTISDGTDEDWIAIELTAGVNYQFTMTGNTLSDTYLRLRDGSGDILRENDDFGGTFNSQISYVATETGTFFVEADAYSTYTGTYSLTITEQAAPDFASTQELADYLLEGDRGYEISFDTSSSNVITVNLSGLTADGQQLAQWAMEAWEMVANIDFQIVTSGEMITLDDEDSGAFAYYPNSGSTSILYGDNTDGVELNVETDWLVYSGTTIDSYSFQTYVHEFGHALGLGHQGDYNGSAIFGTSNLFANDSWQMSVMSYFNQTENTNTDASYGYTAGAMMVDILAIQELYGEPDANSVTAGDTTYGANSTLGNYLDDVFQVYMSGVPTTDVTGNDMVFTIYDRDGVDLLDFSTLGSSVDARIDMNDGTFSDFGLSIGIMGIAESTIIENAALGAGDDVVTGNAADNVIHGGAGEDILDGEVGDDTLDGGAGADELNGGTGTDTASYHSAVSRIIVDLQNSAINVGDAIGDAFDSIEMFVASRYGDQLRGDSNANDFSGGNASDRLYGRAGDDILDGEFGADALYGNSGADTMTGGEGDVRDRFIFFQLSDSGVGEGNRDIITDYQVGIDRIEVSRLDADLTTGGRQDFDFIGENNFSGTAGEMIQRTVGLNTLIEADVDGDGASDFSIELVGQLVLTSDDFLF
SIO_010081: OSB_RS16345
subclass of: SO_0000673
so part of: OSB_RS16345
location: complement(18495..20594)
location: region:18495-20594:-1
so has part: feature:18495-20594:-1:exon

WP_049836237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18495-20594:-1:exon

OSB_RS16350
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16350
old locus tag: OSB_33280
so part of: sequence
location: complement(20751..22607)
location: region:20751-22607:-1
so has part: feature:20751-22607:-1:exon
subclass of: SO_0000010

position:20751:-1
position: 20751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22607:-1
position: 22607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20751-22607:-1:exon

OSB_RS16350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16350
old locus tag: OSB_33280
inference: COORDINATES: protein motif:HMM:NF016903.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhamnan synthesis F family protein
translation: MTIAIYTVGQRPETAPYVRLAIHELAREADRVYVGIHPSGEDTVPMFIGGLPNVEYVVYPEHYTSAFGRMQYVINQLGEAAIGKTIIASGSNVIGPLFSVKKILSDAERSGSALYSSYWHNSNLDPRLKGIKCPDLIPYFDFVVMSPEFLGSTMIREVFARIEPNSDYWEEFVNCIVPIAKTTIQLGLKVAYPFKADELNTVDPRLFEVHKLVKGRGICFPLALFELDPLLHDLNAIRLRDAVDAIRTRAPRVYKSTMTYLNGSLPLRDFAMIADQYEVIADTAAEPDKSEWDFGEVAVFVHAFYAEMMPEFLELSKNIPAAHHLFITTASDENRSKIIAFLESKKLSKKKYTVRVVEQNRGRDMSSLFITWRDIILEGDYKVALRLHSKRTPQVSPRVGESFKEHLFENLVGSSDYVRNVLDLMEREPDIGLVIPPIIHMGFGTLGHSWFNNKKQVQTELDSMGMSVVVDYNTPVAAYGTMYWFRTDALFPMFLKEWNWEDYNPEPHHVDGGLAHVQERLIAYVIQGRGYRVMSVMTQNYAARSYAKLEYKLQRLAALTISGNVFEQVRQLETSNATTRSRLFRWLQQHYGNLLTRSPKARVYLKPFKNFVVWIFQR
SIO_010081: OSB_RS16350
subclass of: SO_0000673
so part of: OSB_RS16350
location: complement(20751..22607)
location: region:20751-22607:-1
so has part: feature:20751-22607:-1:exon

WP_049836238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20751-22607:-1:exon

OSB_RS16355
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16355
old locus tag: OSB_33290
so part of: sequence
location: complement(22634..23413)
location: region:22634-23413:-1
so has part: feature:22634-23413:-1:exon
subclass of: SO_0000010

position:22634:-1
position: 22634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23413:-1
position: 23413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22634-23413:-1:exon

OSB_RS16355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16355
old locus tag: OSB_33290
inference: COORDINATES: protein motif:HMM:NF012888.2
GO function: GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase domain-containing protein
translation: MNDTNQFELTVGLYSFPKSGNTWLRAIIAGITEMPQGPGILQRFVTDTHYGKVKEDPWYFQGKDWYFYKSHWKDEMTEDGGGKFATDKIIYIYRHPLDVFLSYLNFVSRNVAANAGKNLPIQFDSVEDLKPEEMEQLFQIFLEHQTLFPQNRKFGGLFEHIDLAKEREAAGESIKIIRYEDLQDNFTSTVEDICSFLGMEGIQVEKVFEKADQRTQQNGKFFWKRQKNNYLNYLTKDQLDRFYEAHGEKMTSYGYPRED
SIO_010081: OSB_RS16355
subclass of: SO_0000673
so part of: OSB_RS16355
location: complement(22634..23413)
location: region:22634-23413:-1
so has part: feature:22634-23413:-1:exon

WP_049836239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22634-23413:-1:exon

OSB_RS16360
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16360
old locus tag: OSB_33300
so part of: sequence
location: complement(23410..24507)
location: region:23410-24507:-1
so has part: feature:23410-24507:-1:exon
subclass of: SO_0000010

position:23410:-1
position: 23410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24507:-1
position: 24507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23410-24507:-1:exon

OSB_RS16360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16360
old locus tag: OSB_33300
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020041592.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GSCFA domain-containing protein
translation: MSNPYKNLPDHCFWSRAHRVEHISDVDPVVKGGFLLKENMKIATAGSCFAQHIARHLQKAGYNYFVTEEVPHPIIPEAVAASFGYGVFSARYGNLYTARQLLQLAKRAYGEFTPEEDFWRNADGYLIDPFRPSVQPGGFVSEDEFYADREVHFAAVRRIVEESDVFVFTFGLTEAWRAKSDGAVFALAPGVAGGLYSTDQHEFVNFSVDEIVADFEEFVTMMRSKNPNVKILMTVSPVPLIATAREDESVLSATSYSKSVLRVAVEQLRERLNDAHYFPSYEVITGNYNRGAYYSENLRDVEEDGVSHAMSLFMKHYTEQSQPSLASRVKKKLTKRKSASNKFQEEVGEALAVICDEELIEKSVK
SIO_010081: OSB_RS16360
subclass of: SO_0000673
so part of: OSB_RS16360
location: complement(23410..24507)
location: region:23410-24507:-1
so has part: feature:23410-24507:-1:exon

WP_049836240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23410-24507:-1:exon

OSB_RS16365
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16365
old locus tag: OSB_33310
so part of: sequence
location: complement(24507..25298)
location: region:24507-25298:-1
so has part: feature:24507-25298:-1:exon
subclass of: SO_0000010

position:25298:-1
position: 25298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24507-25298:-1:exon

OSB_RS16365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16365
old locus tag: OSB_33310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSDLNILLIGHSHAGCIARAYRQSEIDGSDLDFEMSQARLNYKTFQPNFEMTNGVRNVHPDLVKRLRHLPKARDADVILTSMMGNEYNQLALMSHPEPYDFEMPDSDFGVLEGVQKLPYEIIRATMASLADENALMLVRQLASTTDLPILVLPPPPPIADPDHIRKFPGAFGKRLKKYEVAPISFRIKMWTLYCHVLRQAAADIENVRFIELPARVFKDGALAPQYWSEDPTHGNEVYGAALLEEISGLAKHVVDQHRKVSA
SIO_010081: OSB_RS16365
subclass of: SO_0000673
so part of: OSB_RS16365
location: complement(24507..25298)
location: region:24507-25298:-1
so has part: feature:24507-25298:-1:exon

WP_143831391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24507-25298:-1:exon

OSB_RS16370
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16370
old locus tag: OSB_33320
so part of: sequence
location: complement(25301..26407)
location: region:25301-26407:-1
so has part: feature:25301-26407:-1:exon
subclass of: SO_0000010

position:25301:-1
position: 25301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26407:-1
position: 26407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25301-26407:-1:exon

OSB_RS16370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16370
old locus tag: OSB_33320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020042869.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MTTKPSKILITGGAGFIGSRLALNLKQNGAEVTVYDNLHPQAHDGNPANLASLEQAAVPVIKGDVCDLEALQSALETVQPEVIYHLAAETGTGQSFDLPTRYCNVNVIGTTNLIEAVRATKSVTRVVLAGSRSVYGEGACVDENGAPTKAVERSPSDLEAGDFAVKDHEGGILTPVPTDASTCPVAPASVYASSKLMQEYLLTQAFWNTDVKVGILRLQNVYGPGQSLNNPYTGVLSIFARQIQEGRVLEIYEDGDITRDFVYVDDVVRAFAAFASVATLPDRIVDIGLGQGATILEIARKMLVSFGEDAMKYRISGAFRPGDIRYGVADISAAKSQLEWAPQHSLENGLAALVAWSKTVHTRPKQEA
SIO_010081: OSB_RS16370
subclass of: SO_0000673
so part of: OSB_RS16370
location: complement(25301..26407)
location: region:25301-26407:-1
so has part: feature:25301-26407:-1:exon

WP_049836242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25301-26407:-1:exon

OSB_RS16375
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: rfbC
locus tag: OSB_RS16375
old locus tag: OSB_33330
so part of: sequence
location: 27000..27563
location: region:27000-27563:1
so has part: feature:27000-27563:1:exon
subclass of: SO_0000010

position:27000:1
position: 27000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27563:1
position: 27563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27000-27563:1:exon

OSB_RS16375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: rfbC
locus tag: OSB_RS16375
old locus tag: OSB_33330
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504426.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MLDIHKTALPGVLVLTPRRFGDDRGFFSETWNKERMAEAGITLDFVQDNHSISATVGTVRGLHFQSPPHAQDKLVRCGRGALLDVAVDIRRGSPTYGHWVAEELSFENGKQLLVPAGFLHGFMTRMPDTEIVYKCTDYYAPECDGAVRWDSCGIEWGFDGNAPVLSEKDMAAPTLAEFSSPFTYEAS
SIO_010081: OSB_RS16375
subclass of: SO_0000673
so part of: OSB_RS16375
location: 27000..27563
location: region:27000-27563:1
so has part: feature:27000-27563:1:exon

WP_049836243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27000-27563:1:exon

OSB_RS16380
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: rfbB
locus tag: OSB_RS16380
old locus tag: OSB_33340
so part of: sequence
location: 27575..28624
location: region:27575-28624:1
so has part: feature:27575-28624:1:exon
subclass of: SO_0000010

position:27575:1
position: 27575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28624:1
position: 28624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27575-28624:1:exon

OSB_RS16380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: rfbB
locus tag: OSB_RS16380
old locus tag: OSB_33340
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014876615.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKLLVTGGAGFIGSAVVRQAIAGGHEVVNLDALTYAACLDNVASVADDPKYAFVKADIRDRAALDEAFADHKPDAVMHLAAESHVDRSIDAPGDFIETNITGTYNMLEAARGYWASMGNPDSFRFHHISTDEVFGSLPADPDIQFTEMTAYDPRSPYSASKAASDHLVRAWSETYGLPVVMTNCSNNYGPYHFPEKLVPVIILNALAGKPLPIYGDGSNIRDWLYVEDHAEALLVVLQKGELGRSYNIGGENERTNLELVQTLCSILDDIRPLAEGSYADLITYVADRPGHDARYAIDPKRISTELGWRPSVTVEEGLRRTVQWYLDNPDWWRALQNRDGVGTRLGVKA
SIO_010081: OSB_RS16380
subclass of: SO_0000673
so part of: OSB_RS16380
location: 27575..28624
location: region:27575-28624:1
so has part: feature:27575-28624:1:exon

WP_049836244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27575-28624:1:exon

OSB_RS16385
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: rfbD
locus tag: OSB_RS16385
old locus tag: OSB_33350
so part of: sequence
location: 28621..29466
location: region:28621-29466:1
so has part: feature:28621-29466:1:exon
subclass of: SO_0000010

position:28621:1
position: 28621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29466:1
position: 29466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28621-29466:1:exon

OSB_RS16385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: rfbD
locus tag: OSB_RS16385
old locus tag: OSB_33350
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187402.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MILVFGKSGQVARELSVLDGVKCLGRDEADYNDPTACAEIVATTTASAIINAVAYTAVDNAETDEETARIVNGNTPAAMAQAAAARGIPFVHISTDYVFEGNGDKPWKTNDPVNPQNAYGRTKLLGENGVRDAGGPHAILRTSWVVSAHGNNFVKTMLRLGEARDALTIVADQFGGPTGAREIAAACHSIAHQLVKDTSKSGTYHFSGAPDVSWADFAIAIFAKSGLTCSVTGIPSSDYPSPAARPLNSRLDCETTLSTFAISRPDWSRTLTHILADLEHQ
SIO_010081: OSB_RS16385
subclass of: SO_0000673
so part of: OSB_RS16385
location: 28621..29466
location: region:28621-29466:1
so has part: feature:28621-29466:1:exon

WP_049836245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28621-29466:1:exon

OSB_RS16390
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
gene: rfbA
locus tag: OSB_RS16390
old locus tag: OSB_33360
so part of: sequence
location: 29466..30362
location: region:29466-30362:1
so has part: feature:29466-30362:1:exon
subclass of: SO_0000010

position:30362:1
position: 30362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29466-30362:1:exon

OSB_RS16390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
gene: rfbA
locus tag: OSB_RS16390
old locus tag: OSB_33360
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017999668.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MTVRTNSRKGIILAGGSGTRLYPITVGISKQLLPVYDKPMVYYPLSVLMLAGIREICVITTPQDQEQFRRTLGDGSQWGISLTYIEQPSPDGLAQAFILAEDFLDGAPSALVLGDNIFFGHGLPELLAGASDRDVGGTVFGYRVSDPERYGVVAFDDDAKATVIIEKPEVPPSNYAVTGLYFLDGSAPARARQVKPSERGEVEITSLLQMYLDEDLLDVERMGRGFAWFDTGTHSSLLDAGNFVRTLTKRQGQQTGCPEEIAFENKWIEIDQLAEQAKKFSKNEYGLYLKSLVEVGSS
SIO_010081: OSB_RS16390
subclass of: SO_0000673
so part of: OSB_RS16390
location: 29466..30362
location: region:29466-30362:1
so has part: feature:29466-30362:1:exon

WP_049836246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29466-30362:1:exon

OSB_RS16395
type: Gene
subclass of: SO_0000704
RO_0002162: 1458307
locus tag: OSB_RS16395
old locus tag: OSB_33370
so part of: sequence
location: complement(30449..31390)
location: region:30449-31390:-1
so has part: feature:30449-31390:-1:exon
subclass of: SO_0000010

position:30449:-1
position: 30449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31390:-1
position: 31390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30449-31390:-1:exon

OSB_RS16395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1458307
locus tag: OSB_RS16395
old locus tag: OSB_33370
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MESQSDRVTILLATFNGEKFLNEQLSSFVEQIDDQWDLLVSDDGSSDDTVELIRTFKRQVKQDHEVTIVTGPKGGFAANFLSLLVRVPSTAELVAFSDQDDVWFPEKISRGRASIADVQDKQIPVLYAAGSVICNEELQLVGESSNFSKHPSFGNSLVQSIGAGNTMMLNGPAIRLLQSAAQEVDALVAHDWWVYQMISGCGGVVVRDPAPTLYYRQHLNNLIGTNRTLRGKASRLFFVTGGKFADWNDTNIRNLNATQHKLTPKAKESLAQFSNARKGSAIKRIRALYRSGAARQRTIGTIALYLACLANRL
SIO_010081: OSB_RS16395
subclass of: SO_0000673
so part of: OSB_RS16395
location: complement(30449..31390)
location: region:30449-31390:-1
so has part: feature:30449-31390:-1:exon

WP_049836247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30449-31390:-1:exon