Nitrospirillum amazonense CBAmc chromosome 4, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Nitrospirillum.
Complete genome sequence of Nitrospirillum amazonense strain CBAmC, an endophytic nitrogen-fixing and plant growth-promoting bacterium, isolated from sugarcane
Submitted (21-JUN-2017) CNPAB, Embrapa, Rodovia BR 465, km 7, Seropedica, Rio de Janeiro 23891-000, Brazil
Submitted (08-JUL-2014) Centro Nacional de Pesquisa de Agrobiologia, Embrapa, Rodovia BR 465 km 7, Seropedica, Rio de Janeiro 23891-000, Brazil
REFSEQ INFORMATION: The reference sequence is identical to\nCP022113.1.\nBacteria and source DNA available from Centro de Recursos\nBiologicos Johanna Dobereiner, Embrapa Agrobiologia, Brazilian\nAgricultural Research Corporation (Embrapa).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Hierarchical Genome Assembly Process\n (HGAP) v. RS_HGAP_Assembly.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 171.0x\nSequencing Technology :: PacBio; Illumina GAIIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 15:42:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,294\nCDSs (total) :: 6,212\nGenes (coding) :: 6,161\nCDSs (with protein) :: 6,161\nGenes (RNA) :: 82\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 63\nncRNAs :: 4\nPseudo Genes (total) :: 51\nCDSs (without protein) :: 51\nPseudo Genes (ambiguous residues) :: 0 of 51\nPseudo Genes (frameshifted) :: 12 of 51\nPseudo Genes (incomplete) :: 42 of 51\nPseudo Genes (internal stop) :: 2 of 51\nPseudo Genes (multiple problems) :: 5 of 51\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_004271752.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
NADPH-dependent 2,4-dienoyl-CoA reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014753350.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF005699.0
GO:0003824 - catalytic activity [Evidence IEA]
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014748333.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004271883.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272593.1
COORDINATES: protein motif:HMM:NF040115.1
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: similar to AA sequence:RefSeq:WP_014753346.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273823.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:TIGR02375.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273820.1
COORDINATES: similar to AA sequence:RefSeq:WP_010666954.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273975.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273974.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_012978306.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978305.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272272.1
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272271.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006146 - adenine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189604.1
manganese efflux pump MntP family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004272270.1
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: protein motif:HMM:NF003974.0
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012227994.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273969.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272213.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_019462768.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012976874.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462770.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975808.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014748359.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273414.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565647.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: similar to AA sequence:RefSeq:WP_007438489.1
COORDINATES: similar to AA sequence:RefSeq:WP_019646132.1
COORDINATES: protein motif:HMM:NF015764.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274026.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007090177.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274024.1
heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF028169.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004271791.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274020.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517487.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_007396295.1
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008495786.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010511771.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013338331.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197574.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272727.1
invasion associated locus B family protein
COORDINATES: protein motif:HMM:NF012888.2
tetratricopeptide repeat-containing sulfotransferase family protein
COORDINATES: protein motif:HMM:NF013257.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273387.1
COORDINATES: protein motif:HMM:NF018877.2
COORDINATES: similar to AA sequence:RefSeq:WP_014745761.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249582.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014246950.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273689.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014188489.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273690.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019646359.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: similar to AA sequence:RefSeq:WP_008621144.1
COORDINATES: protein motif:HMM:NF024151.2
COORDINATES: similar to AA sequence:RefSeq:WP_019643974.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273691.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_004273692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011630982.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019460537.1
COORDINATES: protein motif:HMM:NF027559.2
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: protein motif:HMM:NF016149.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
copper homeostasis periplasmic binding protein CopC
COORDINATES: similar to AA sequence:RefSeq:WP_004272451.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271544.1
COORDINATES: protein motif:HMM:NF012356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271660.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271659.1
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF021621.2
COORDINATES: protein motif:HMM:NF006741.0
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274125.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274124.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274123.1
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008851023.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272594.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013384.2
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_019645780.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976879.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: similar to AA sequence:RefSeq:WP_007435173.1
COORDINATES: protein motif:HMM:NF040043.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF012935.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008621233.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF012422.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_012554586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012554587.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273623.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02292.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011382455.1
GO:0046872 - metal ion binding [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014753319.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008365178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274005.1
COORDINATES: similar to AA sequence:RefSeq:WP_019646225.1
COORDINATES: similar to AA sequence:RefSeq:WP_008942842.1
COORDINATES: similar to AA sequence:RefSeq:WP_008942841.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012039976.1
COORDINATES: similar to AA sequence:RefSeq:WP_011387884.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
COORDINATES: protein motif:HMM:NF015397.2
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF020130.2
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016027.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611092.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273637.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189482.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197568.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012977969.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014189485.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_002726856.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_015074266.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274069.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274070.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189491.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977961.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0019250 - aerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019646793.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007439540.1
COORDINATES: similar to AA sequence:RefSeq:WP_012779117.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011665393.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976048.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_012975330.1
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_011383366.1
COORDINATES: similar to AA sequence:RefSeq:WP_015934105.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
COORDINATES: protein motif:HMM:TIGR01686.1
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF013722.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: similar to AA sequence:RefSeq:WP_012553437.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012974796.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019645049.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
D-glycero-beta-D-manno-heptose-7-phosphate kinase
COORDINATES: protein motif:HMM:NF016464.2
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: similar to AA sequence:RefSeq:WP_019085477.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745586.1
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:NF024120.2
glycosyl hydrolase family 28-related protein
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008494257.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273033.1
COORDINATES: protein motif:HMM:NF013306.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273034.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: protein motif:HMM:NF016109.2
COORDINATES: similar to AA sequence:RefSeq:WP_019459526.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273035.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273036.1
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF037848.2
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019015454.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_015074356.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188913.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_004272834.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019091313.1
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: protein motif:HMM:NF025004.2
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272430.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272431.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188911.1
COORDINATES: similar to AA sequence:RefSeq:WP_009542351.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011382935.1
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189158.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273133.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272819.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272818.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271678.1
COORDINATES: protein motif:HMM:NF014026.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF026941.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF020366.2
COORDINATES: protein motif:HMM:TIGR03361.1
type VI secretion system tip protein VgrG
COORDINATES: protein motif:HMM:TIGR03354.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system-associated FHA domain protein TagH
COORDINATES: protein motif:HMM:TIGR03352.1
type VI secretion system lipoprotein TssJ
COORDINATES: similar to AA sequence:RefSeq:WP_012974390.1
type VI secretion system baseplate subunit TssK
COORDINATES: protein motif:HMM:NF038228.1
type IVB secretion system protein IcmH/DotU
COORDINATES: protein motif:HMM:TIGR03348.1
type VI secretion system membrane subunit TssM
COORDINATES: protein motif:HMM:NF018884.2
type VI secretion system-associated protein TagF
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: protein motif:HMM:TIGR03363.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247367.1
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008493937.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004272690.1
COORDINATES: protein motif:HMM:NF018699.2
type VI secretion system accessory protein TagJ
COORDINATES: protein motif:HMM:TIGR03357.1
type VI secretion system baseplate subunit TssE
COORDINATES: similar to AA sequence:RefSeq:WP_014247362.1
type VI secretion system baseplate subunit TssF
COORDINATES: protein motif:HMM:TIGR03347.1
type VI secretion system baseplate subunit TssG
COORDINATES: similar to AA sequence:RefSeq:WP_019012625.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247373.1
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_004272585.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272584.1
GO:0008832 - dGTPase activity [Evidence IEA]
GO:0006203 - dGTP catabolic process [Evidence IEA]
anti-phage deoxyguanosine triphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014242505.1
COORDINATES: similar to AA sequence:RefSeq:WP_007090621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242507.1
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242510.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273584.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273585.1
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: similar to AA sequence:RefSeq:WP_004274582.1
COORDINATES: protein motif:HMM:NF033563.0
COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
COORDINATES: similar to AA sequence:RefSeq:WP_008495272.1
COORDINATES: similar to AA sequence:RefSeq:WP_008495273.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008495270.1
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: similar to AA sequence:RefSeq:WP_012977233.1
COORDINATES: similar to AA sequence:RefSeq:WP_008493185.1
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: protein motif:HMM:NF025878.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019462510.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273838.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273839.1
GO:0015137 - citrate transmembrane transporter activity [Evidence IEA]
GO:0015746 - citrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019157.2
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013640220.1
COORDINATES: similar to AA sequence:RefSeq:WP_013640219.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF017174.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271973.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271974.1
COORDINATES: protein motif:HMM:NF018528.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271647.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271648.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271650.1
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271651.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271652.1
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977011.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272598.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_012566057.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272780.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272094.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272095.1
COORDINATES: similar to AA sequence:RefSeq:WP_020593402.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019013302.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007090671.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_012976634.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004273748.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273749.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273750.1
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: protein motif:HMM:NF041462.1
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273722.1
COORDINATES: protein motif:HMM:TIGR03396.1
GO:0004629 - phospholipase C activity [Evidence IEA]
phospholipase C, phosphocholine-specific
COORDINATES: similar to AA sequence:RefSeq:WP_014248923.1
COORDINATES: similar to AA sequence:RefSeq:WP_018266249.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977930.1
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: similar to AA sequence:RefSeq:WP_012222910.1
COORDINATES: protein motif:HMM:NF027798.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271728.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272138.1
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_008946162.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198716.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019015160.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272139.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008946163.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241920.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:TIGR01901.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272063.1
COORDINATES: similar to AA sequence:RefSeq:WP_014753362.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438657.1
COORDINATES: similar to AA sequence:RefSeq:WP_019086628.1
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272257.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240662.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272259.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272262.1
COORDINATES: similar to AA sequence:RefSeq:WP_008494219.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272264.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272265.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011390766.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240723.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272530.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272531.1
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273047.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273048.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273049.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007422865.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01782.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273051.1
COORDINATES: protein motif:HMM:NF018928.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273052.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271527.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274145.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004274144.1
GO:0045027 - DNA end binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011388742.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274143.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274142.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274141.1
COORDINATES: similar to AA sequence:RefSeq:WP_003627141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014744882.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274522.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_008891435.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272421.1
LamG-like jellyroll fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272422.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272424.1
COORDINATES: protein motif:HMM:NF012335.2
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012568040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272425.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977671.1
COORDINATES: similar to AA sequence:RefSeq:WP_008891412.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_012977669.1
COORDINATES: similar to AA sequence:RefSeq:WP_019089979.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422894.1
GO:0018454 - acetoacetyl-CoA reductase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274135.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274137.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747369.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274138.1
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF025688.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273818.1
COORDINATES: protein motif:HMM:NF012506.2
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_019015751.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004271558.1
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_019014408.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012040242.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461292.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611778.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025852.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274000.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274004.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF015279.2
COORDINATES: similar to AA sequence:RefSeq:WP_007088911.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197900.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197899.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197898.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF025839.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272291.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272290.1
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_007435439.1
COORDINATES: similar to AA sequence:RefSeq:WP_015074206.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976052.1
COORDINATES: similar to AA sequence:RefSeq:WP_008492054.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004457 - lactate dehydrogenase activity [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]
FMN-dependent L-lactate dehydrogenase LldD
COORDINATES: similar to AA sequence:RefSeq:WP_004274276.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274278.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274280.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188967.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274257.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274256.1
YVTN family beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_011632616.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241335.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:TIGR03032.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025611.2
autotransporter-associated beta strand repeat-containing protein
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274188.1
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274191.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014190032.1
COORDINATES: protein motif:HMM:TIGR04557.1
quinoprotein dehydrogenase-associated SoxYZ-like carrier
COORDINATES: protein motif:HMM:TIGR04559.1
quinoprotein relay system zinc metallohydrolase 2
COORDINATES: similar to AA sequence:RefSeq:WP_006115941.1
GO:0018149 - peptide cross-linking [Evidence IEA]; GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis protein PqqE
COORDINATES: similar to AA sequence:RefSeq:WP_011632627.1
GO:0048038 - quinone binding [Evidence IEA]
GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis peptide chaperone PqqD
COORDINATES: similar to AA sequence:RefSeq:WP_019087836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011632629.1
pyrroloquinoline quinone biosynthesis protein PqqB
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: similar to AA sequence:RefSeq:WP_008618166.1
GO:0035991 - nitric oxide sensor activity [Evidence IEA]
GO:0046209 - nitric oxide metabolic process [Evidence IEA]
NahK/ErcS family hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: similar to AA sequence:RefSeq:WP_007424916.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424915.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004271765.1
GO:0045735 - nutrient reservoir activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241328.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271764.1
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014188386.1
COORDINATES: protein motif:HMM:TIGR03871.1
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR03865.1
PQQ-dependent catabolism-associated CXXCW motif protein
COORDINATES: similar to AA sequence:RefSeq:WP_013635114.1
COORDINATES: protein motif:HMM:NF025104.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_007002147.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747923.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271759.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002151.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271757.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271756.1
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_014104247.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014753349.1