Nitrospirillum amazonense CBAmc chromosome 2, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Nitrospirillum.
Complete genome sequence of Nitrospirillum amazonense strain CBAmC, an endophytic nitrogen-fixing and plant growth-promoting bacterium, isolated from sugarcane
Submitted (21-JUN-2017) CNPAB, Embrapa, Rodovia BR 465, km 7, Seropedica, Rio de Janeiro 23891-000, Brazil
Submitted (08-JUL-2014) Centro Nacional de Pesquisa de Agrobiologia, Embrapa, Rodovia BR 465 km 7, Seropedica, Rio de Janeiro 23891-000, Brazil
REFSEQ INFORMATION: The reference sequence is identical to\nCP022111.1.\nBacteria and source DNA available from Centro de Recursos\nBiologicos Johanna Dobereiner, Embrapa Agrobiologia, Brazilian\nAgricultural Research Corporation (Embrapa).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Hierarchical Genome Assembly Process\n (HGAP) v. RS_HGAP_Assembly.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 171.0x\nSequencing Technology :: PacBio; Illumina GAIIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 15:42:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,294\nCDSs (total) :: 6,212\nGenes (coding) :: 6,161\nCDSs (with protein) :: 6,161\nGenes (RNA) :: 82\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 63\nncRNAs :: 4\nPseudo Genes (total) :: 51\nCDSs (without protein) :: 51\nPseudo Genes (ambiguous residues) :: 0 of 51\nPseudo Genes (frameshifted) :: 12 of 51\nPseudo Genes (incomplete) :: 42 of 51\nPseudo Genes (internal stop) :: 2 of 51\nPseudo Genes (multiple problems) :: 5 of 51\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0016740 - transferase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007004186.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004273147.1
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011383735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273441.1
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014896.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_012976076.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198636.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274052.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198639.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274055.1
COORDINATES: protein motif:HMM:NF024100.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_012567644.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_012040417.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271539.1
COORDINATES: protein motif:HMM:NF016974.2
GO:0018193 - peptidyl-amino acid modification [Evidence IEA]
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: protein motif:HMM:NF025605.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012569161.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012569162.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272174.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240487.1
COORDINATES: similar to AA sequence:RefSeq:WP_010513520.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271770.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567844.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012567842.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977718.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272027.1
COORDINATES: similar to AA sequence:RefSeq:WP_007003219.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_011382455.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978391.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
Bcr/CflA family multidrug efflux MFS transporter
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006817000.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272629.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272312.1
spore coat protein U domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272762.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943626.1
COORDINATES: protein motif:HMM:NF016874.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274029.1
GO:0008663 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_012975845.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273507.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565488.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272809.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566952.1
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273413.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273412.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422834.1
ribulose bisphosphate carboxylase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004273410.1
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004273409.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007437382.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007422831.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273405.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975171.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272054.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004272056.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241150.1
GO:0010257 - NADH dehydrogenase complex assembly [Evidence IEA]
NADH:ubiquinone oxidoreductase subunit NDUFA12
COORDINATES: similar to AA sequence:RefSeq:WP_012566142.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: protein motif:HMM:NF021444.2
COORDINATES: similar to AA sequence:RefSeq:WP_012566144.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: similar to AA sequence:RefSeq:WP_002727878.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012973696.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566148.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566149.1
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272970.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974929.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_012566860.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975806.1
COORDINATES: similar to AA sequence:RefSeq:WP_002731082.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014190026.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024914.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_007090766.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012567437.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF017079.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272045.1
GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO:0009297 - pilus assembly [Evidence IEA]
fimbria/pilus outer membrane usher protein
COORDINATES: protein motif:HMM:NF012565.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271657.1
COORDINATES: protein motif:HMM:NF012792.2
helix-turn-helix domain-containing GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007091292.1
COORDINATES: similar to AA sequence:RefSeq:WP_012972723.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF039797.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004274286.1
COORDINATES: similar to AA sequence:RefSeq:WP_013639910.1
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: similar to AA sequence:RefSeq:WP_012228435.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240042.1
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273099.1
COORDINATES: similar to AA sequence:RefSeq:WP_003621057.1
COORDINATES: protein motif:HMM:NF015012.2
L-dopachrome tautomerase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_014246810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014246811.1
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF024970.2
histidine kinase dimerization/phosphoacceptor domain -containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273425.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273426.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566816.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002726040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273281.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273280.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_012974944.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272446.1
GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
COORDINATES: protein motif:HMM:NF024516.2
COORDINATES: protein motif:HMM:NF019619.2
COORDINATES: similar to AA sequence:RefSeq:WP_008942712.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014744151.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015513.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977953.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439681.1
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009539855.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019645198.1
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010512657.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007396268.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_008944929.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247504.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566899.1
COORDINATES: protein motif:HMM:NF025292.2
lipocalin-like domain-containing protein
COORDINATES: protein motif:HMM:NF018984.2
COORDINATES: similar to AA sequence:RefSeq:WP_019462598.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
class I poly(R)-hydroxyalkanoic acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008620431.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566496.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008620434.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976048.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_012975330.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_011982890.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004273067.1
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273071.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273072.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF009074.0
COORDINATES: similar to AA sequence:RefSeq:WP_076611705.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012569063.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF025008.2
COORDINATES: protein motif:HMM:NF024966.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976672.1
COORDINATES: protein motif:HMM:NF012339.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976673.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:NF019335.2
COORDINATES: protein motif:HMM:NF014698.2
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: similar to AA sequence:RefSeq:WP_009542246.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976680.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976658.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945122.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007004494.1
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976681.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_008945503.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976712.1
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976492.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976667.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012976666.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012976603.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976602.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013757.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF019845.2
2-enoyl thioester reductase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019460525.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004999.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF014757.2
COORDINATES: similar to AA sequence:RefSeq:WP_019014522.1
COORDINATES: similar to AA sequence:RefSeq:WP_019012683.1
COORDINATES: protein motif:HMM:NF013044.2
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF009478.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976519.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272579.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976689.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976697.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004273078.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_011631116.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389723.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_014249807.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007422231.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014249805.1
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274160.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012554260.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014199843.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976867.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976868.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976869.1
COORDINATES: similar to AA sequence:RefSeq:WP_010507363.1
COORDINATES: similar to AA sequence:RefSeq:WP_015934105.1
COORDINATES: similar to AA sequence:RefSeq:WP_011383366.1
COORDINATES: similar to AA sequence:RefSeq:WP_003596089.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004271722.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460535.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271719.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271718.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271717.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188797.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012553437.1
COORDINATES: protein motif:HMM:NF039360.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271705.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271715.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271714.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271712.1
COORDINATES: protein motif:HMM:NF024865.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271710.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014753198.1
COORDINATES: similar to AA sequence:RefSeq:WP_014753206.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271707.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271704.1
COORDINATES: similar to AA sequence:RefSeq:WP_008613613.1
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004271702.1
indolepyruvate oxidoreductase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271701.1
alpha/beta hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271700.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271699.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271698.1
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271461.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271697.1
COORDINATES: protein motif:HMM:NF024212.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271694.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271693.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271691.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271690.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271689.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271688.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437661.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271686.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271685.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271683.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271682.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271681.1
COORDINATES: protein motif:HMM:NF018399.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271680.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005760.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271845.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944639.1
COORDINATES: protein motif:HMM:NF025051.2
COORDINATES: similar to AA sequence:RefSeq:WP_014198036.1
COORDINATES: similar to AA sequence:RefSeq:WP_011382636.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_016737767.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03794.1
NHLP bacteriocin system secretion protein
COORDINATES: similar to AA sequence:RefSeq:WP_007005609.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit
COORDINATES: protein motif:HMM:TIGR03797.1
GO:0015440 - ABC-type peptide transporter activity [Evidence IEA]
GO:0043213 - bacteriocin transport [Evidence IEA]
NHLP bacteriocin export ABC transporter permease/ATPase subunit
COORDINATES: protein motif:HMM:TIGR03897.1
type 2 lanthipeptide synthetase LanM family protein
Nif11-like leader peptide family natural product precursor
COORDINATES: similar to AA sequence:RefSeq:WP_004274667.1
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611806.1
GO:0015074 - DNA integration [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004274664.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_007817150.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003544693.1
COORDINATES: similar to AA sequence:RefSeq:WP_012227026.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274660.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274659.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274658.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977324.1
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274656.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274655.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
Ni/Fe-hydrogenase, b-type cytochrome subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274654.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_004274653.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_004274652.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274651.1
hydrogenase expression/formation protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274650.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274649.1
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: similar to AA sequence:RefSeq:WP_007423295.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_004274646.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0051604 - protein maturation [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_014189579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274644.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274643.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_004274642.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274641.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274640.1
COORDINATES: similar to AA sequence:RefSeq:WP_008622301.1
GO:0016151 - nickel cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274638.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274637.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274635.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274634.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274633.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977158.1
COORDINATES: protein motif:HMM:NF017775.2
ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274627.1
GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274626.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_017980846.1
COORDINATES: similar to AA sequence:RefSeq:WP_009239774.1
COORDINATES: protein motif:HMM:NF006002.0
COORDINATES: similar to AA sequence:RefSeq:WP_002726778.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0052737 - pyruvate dehydrogenase (quinone) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0006090 - pyruvate metabolic process [Evidence IEA]
ubiquinone-dependent pyruvate dehydrogenase
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976053.1
COORDINATES: similar to AA sequence:RefSeq:WP_014746867.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274381.1
COORDINATES: protein motif:HMM:NF005566.0
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271322.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273831.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_019088882.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272613.1
COORDINATES: protein motif:HMM:NF024809.2
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011385791.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272519.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272520.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011630854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272522.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272523.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272524.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271536.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271535.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271534.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242602.1
COORDINATES: similar to AA sequence:RefSeq:WP_012224151.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273296.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272097.1
COORDINATES: protein motif:HMM:NF019011.2
COORDINATES: similar to AA sequence:RefSeq:WP_007438701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198596.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011386575.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271891.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199715.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976750.1
COORDINATES: similar to AA sequence:RefSeq:WP_011391231.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273583.1
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274018.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:NF022201.2
COORDINATES: protein motif:HMM:TIGR02517.1
COORDINATES: protein motif:HMM:NF015867.2
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF038403.1
permease prefix domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007439430.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462164.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978505.1
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014199938.1
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_014747326.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747327.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199941.1
galactofuranose ABC transporter, galactofuranose-binding protein YtfQ
COORDINATES: similar to AA sequence:RefSeq:WP_004273218.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273217.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273215.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273214.1
COORDINATES: protein motif:HMM:NF018647.2
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271772.1
COORDINATES: similar to AA sequence:RefSeq:WP_008852673.1
COORDINATES: protein motif:HMM:NF012273.2
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF006564.0
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011632427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424894.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011382976.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008495455.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273237.1
bifunctional protein-serine/threonine kinase/phosphatase
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_007421687.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_019462146.1
GO:0004334 - fumarylacetoacetase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978116.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF006719.0
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: similar to AA sequence:RefSeq:WP_019012696.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272364.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020592374.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:TIGR03025.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF013793.2
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF014606.2
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF021589.2
COORDINATES: similar to AA sequence:RefSeq:WP_009542823.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012976442.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024120.2
glycosyl hydrolase family 28-related protein
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF037627.2
COORDINATES: similar to AA sequence:RefSeq:WP_010510726.1
COORDINATES: similar to AA sequence:RefSeq:WP_003626015.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_008495373.1
COORDINATES: similar to AA sequence:RefSeq:WP_013639927.1
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_011631213.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435505.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_007005106.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_004274117.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: protein motif:HMM:TIGR01433.1
COORDINATES: similar to AA sequence:RefSeq:WP_009542311.1
COORDINATES: similar to AA sequence:RefSeq:WP_013639881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274118.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271952.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271951.1
COORDINATES: similar to AA sequence:RefSeq:WP_010668485.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015072183.1
COORDINATES: protein motif:HMM:NF019157.2
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011632992.1
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:NF015552.2
dicarboxylate transporter/tellurite-resistance protein TehA
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_007006320.1
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_007005970.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187828.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390043.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274559.1
COORDINATES: protein motif:HMM:NF018351.2
catalase-related domain-containing protein
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_006558398.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271849.1
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009541474.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943937.1
COORDINATES: protein motif:HMM:NF021462.2
COORDINATES: similar to AA sequence:RefSeq:WP_007422042.1
COORDINATES: protein motif:HMM:TIGR02451.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019646368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273603.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273604.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012967.2
COORDINATES: protein motif:HMM:NF015437.2
COORDINATES: protein motif:HMM:NF024778.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273752.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247033.1
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249993.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567100.1
lipid-A-disaccharide synthase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012567099.1
COORDINATES: similar to AA sequence:RefSeq:WP_019016614.1
bifunctional nicotinamidase/pyrazinamidase
COORDINATES: similar to AA sequence:RefSeq:WP_007090281.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273096.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015074676.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004273210.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249606.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273211.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
GDL motif peptide-associated radical SAM/SPASM maturase
COORDINATES: similar to AA sequence:RefSeq:WP_012566748.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197479.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566746.1
COORDINATES: similar to AA sequence:RefSeq:WP_019644145.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008621430.1
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_012566745.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272347.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014745359.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272348.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014104381.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977764.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_007091545.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272406.1
COORDINATES: similar to AA sequence:RefSeq:WP_007091536.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272841.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: similar to AA sequence:RefSeq:WP_019462051.1
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272316.1
COORDINATES: similar to AA sequence:RefSeq:WP_011632490.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973926.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012973927.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF021367.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274147.1
COORDINATES: similar to AA sequence:RefSeq:WP_002725939.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF012532.2
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007422513.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_019645632.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274434.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274435.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566773.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_002726368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274440.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566766.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272381.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272380.1
COORDINATES: similar to AA sequence:RefSeq:WP_009540552.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_018266249.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189761.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566831.1
COORDINATES: similar to AA sequence:RefSeq:WP_009542172.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039197.1
COORDINATES: protein motif:HMM:NF024317.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_002728206.1
COORDINATES: similar to AA sequence:RefSeq:WP_002728205.1
COORDINATES: similar to AA sequence:RefSeq:WP_002728204.1
COORDINATES: similar to AA sequence:RefSeq:WP_019647008.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240647.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_009540111.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012565983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566774.1
COORDINATES: similar to AA sequence:RefSeq:WP_011386724.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271795.1
COORDINATES: similar to AA sequence:RefSeq:WP_006117106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271796.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF028169.2
COORDINATES: similar to AA sequence:RefSeq:WP_014198602.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005049.1
COORDINATES: protein motif:HMM:NF016269.2
lipid-binding SYLF domain-containing protein
COORDINATES: protein motif:HMM:TIGR02284.1
COORDINATES: protein motif:HMM:NF019696.2
GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271994.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271996.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271997.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004271998.1
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272545.1
COORDINATES: similar to AA sequence:RefSeq:WP_019459887.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_012974539.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012227230.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_012974535.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:NF012659.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273221.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_008493626.1
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF025851.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273085.1
exo 1,3/1,4-beta-D-glucan glucohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004273086.1
COORDINATES: protein motif:HMM:NF016150.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271527.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273088.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273090.1
COORDINATES: protein motif:HMM:TIGR01782.1
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273092.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273093.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF024864.2
cupredoxin family copper-binding protein
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274212.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274213.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274214.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274215.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274216.1
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF015553.2
COORDINATES: similar to AA sequence:RefSeq:WP_007002023.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005381.1
COORDINATES: protein motif:HMM:NF008185.0
TMAO reductase system periplasmic protein TorT
COORDINATES: similar to AA sequence:RefSeq:WP_004271929.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009539876.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566253.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019643773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274034.1
COORDINATES: protein motif:HMM:NF012705.2
squalene/phytoene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274032.1
COORDINATES: similar to AA sequence:RefSeq:WP_019013867.1
COORDINATES: protein motif:HMM:NF014564.2
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019463200.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273542.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273541.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566258.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197273.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_012974308.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271790.1
Sec-independent protein translocase subunit TatA
COORDINATES: protein motif:HMM:TIGR01410.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
Sec-independent protein translocase protein TatB
COORDINATES: similar to AA sequence:RefSeq:WP_014188427.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944670.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002727836.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566248.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012974065.1
LysM peptidoglycan-binding domain-containing M23 family metallopeptidase
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03506.1
flagellar hook-basal body complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247552.1
putative metalloprotease CJM1_0395 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197584.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012568425.1
COORDINATES: similar to AA sequence:RefSeq:WP_012568424.1
COORDINATES: similar to AA sequence:RefSeq:WP_012568423.1
COORDINATES: similar to AA sequence:RefSeq:WP_012568422.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274184.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: similar to AA sequence:RefSeq:WP_014190031.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: similar to AA sequence:RefSeq:WP_006557842.1
COORDINATES: protein motif:HMM:NF021119.2
spore germination protein GerW family protein
COORDINATES: protein motif:HMM:NF012888.2
GO:0008146 - sulfotransferase activity [Evidence IEA]
sulfotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273173.1
COORDINATES: protein motif:HMM:NF023330.2
COORDINATES: similar to AA sequence:RefSeq:WP_012568263.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273169.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004273168.1
COORDINATES: similar to AA sequence:RefSeq:WP_002730848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273166.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273165.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242544.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_004272817.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_004272329.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272331.1
COORDINATES: similar to AA sequence:RefSeq:WP_007438442.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189162.1
COORDINATES: similar to AA sequence:RefSeq:WP_014413434.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272811.1
COORDINATES: similar to AA sequence:RefSeq:WP_016738213.1
GO:0045735 - nutrient reservoir activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019460895.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_012568529.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945825.1
COORDINATES: similar to AA sequence:RefSeq:WP_011347541.1
COORDINATES: similar to AA sequence:RefSeq:WP_012222499.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273493.1
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: similar to AA sequence:RefSeq:WP_008615601.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945667.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273491.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002731173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273490.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273489.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566369.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008615621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240453.1
GGDEF domain-containing phosphodiesterase
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272513.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: similar to AA sequence:RefSeq:WP_014415661.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004272512.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF016819.2
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273850.1
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF014586.2
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737891.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272163.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008944228.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272164.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014188745.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018264.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272166.1
COORDINATES: similar to AA sequence:RefSeq:WP_014746063.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_004272167.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006116237.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274218.1
GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274219.1
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566261.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_008494380.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274223.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566241.1
COORDINATES: similar to AA sequence:RefSeq:WP_009539892.1
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_011389532.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272011.1
GO:0008832 - dGTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272010.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_008944683.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016041.2
COORDINATES: similar to AA sequence:RefSeq:WP_011388515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011388516.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566749.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_014247827.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: similar to AA sequence:RefSeq:WP_014247829.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:TIGR04407.1
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_004273259.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974558.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273260.1
COORDINATES: similar to AA sequence:RefSeq:WP_003618032.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273262.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271881.1
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272227.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974285.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014414632.1
COORDINATES: similar to AA sequence:RefSeq:WP_002728308.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012566760.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF022784.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247974.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974291.1
COORDINATES: similar to AA sequence:RefSeq:WP_011384498.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015074437.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975558.1
COORDINATES: similar to AA sequence:RefSeq:WP_008851853.1
COORDINATES: protein motif:HMM:TIGR01728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274060.1
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273612.1
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_019086079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240409.1
molybdopterin-binding/glycosyltransferase family 2 protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272624.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274429.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274428.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241955.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273257.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272105.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_011204222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274157.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004274158.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007005361.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007090923.1
COORDINATES: similar to AA sequence:RefSeq:WP_043743620.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_004272171.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0008152 - metabolic process [Evidence IEA]; GO:0009853 - photorespiration [Evidence IEA]
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004272170.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022155.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272437.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240447.1
protein-L-isoaspartate O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004274668.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274595.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274596.1
COORDINATES: protein motif:HMM:NF007570.0
GO:0000700 - mismatch base pair DNA N-glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019013577.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_004273480.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013639213.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019462131.1
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566360.1
COORDINATES: protein motif:HMM:NF018038.2
COORDINATES: similar to AA sequence:RefSeq:WP_007005059.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517162.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011383521.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
Orn/Lys/Arg decarboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274385.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747395.1
COORDINATES: similar to AA sequence:RefSeq:WP_007001925.1
COORDINATES: similar to AA sequence:RefSeq:WP_007004507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272699.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272700.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272701.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976771.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012222568.1
COORDINATES: similar to AA sequence:RefSeq:WP_013635100.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272703.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272704.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435129.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272705.1
COORDINATES: protein motif:HMM:NF014841.2
D-isomer specific 2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019462868.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007005535.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005536.1
COORDINATES: similar to AA sequence:RefSeq:WP_007005537.1
COORDINATES: similar to AA sequence:RefSeq:WP_007089348.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944130.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273683.1
COORDINATES: protein motif:HMM:NF012517.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272063.1
COORDINATES: similar to AA sequence:RefSeq:WP_019012722.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019462833.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_004272442.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: similar to AA sequence:RefSeq:WP_014747341.1
COORDINATES: similar to AA sequence:RefSeq:WP_008985258.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272293.1
formate dehydrogenase accessory protein FdhE
COORDINATES: protein motif:HMM:TIGR01583.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003625431.1
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0045333 - cellular respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011378913.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189731.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011632244.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011385784.1
COORDINATES: protein motif:HMM:NF024922.2
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: similar to AA sequence:RefSeq:WP_004272288.1
COORDINATES: similar to AA sequence:RefSeq:WP_014106570.1
cytochrome (ubi)quinol oxidase subunit III
COORDINATES: protein motif:HMM:TIGR02847.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461066.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008613345.1
COORDINATES: protein motif:HMM:NF012335.2
NADPH:quinone oxidoreductase family protein
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: similar to AA sequence:RefSeq:WP_007089897.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436257.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745008.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389773.1
COORDINATES: similar to AA sequence:RefSeq:WP_014413691.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272580.1
COORDINATES: protein motif:HMM:NF024039.2
COORDINATES: protein motif:HMM:NF009206.0
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:TIGR00791.1
GO:0015295 - solute:proton symporter activity [Evidence IEA]
GO:0015718 - monocarboxylic acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272023.1
GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272022.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272020.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389106.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF019352.2
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: similar to AA sequence:RefSeq:WP_012977488.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF013706.2
COORDINATES: similar to AA sequence:RefSeq:WP_007437558.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273816.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010513982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272311.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737755.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012977383.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239655.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273630.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273629.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273628.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273627.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977432.1
COORDINATES: similar to AA sequence:RefSeq:WP_008850231.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272715.1
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_008890863.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247882.1
GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566353.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024913.2
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273136.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566352.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008621803.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028467.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271353.1
COORDINATES: protein motif:HMM:NF016674.2
COORDINATES: protein motif:HMM:NF022440.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273469.1
GO:0033573 - high-affinity iron permease complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005381 - iron ion transmembrane transporter activity [Evidence IEA]
GO:0034755 - iron ion transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566290.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273473.1
COORDINATES: similar to AA sequence:RefSeq:WP_008942708.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272961.1
COORDINATES: similar to AA sequence:RefSeq:WP_007437659.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272963.1
COORDINATES: similar to AA sequence:RefSeq:WP_100085453.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004272965.1
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249206.1
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF036537.2
COORDINATES: protein motif:HMM:NF024306.2
COORDINATES: similar to AA sequence:RefSeq:WP_015073356.1
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273621.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273623.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390942.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008945713.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271778.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004271779.1
COORDINATES: similar to AA sequence:RefSeq:WP_019012808.1
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: similar to AA sequence:RefSeq:WP_007282782.1
COORDINATES: protein motif:HMM:NF022636.2
COORDINATES: similar to AA sequence:RefSeq:WP_011631508.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013882.2
COORDINATES: similar to AA sequence:RefSeq:WP_008944466.1
PleD family two-component system response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014413270.1
COORDINATES: similar to AA sequence:RefSeq:WP_011253626.1
COORDINATES: protein motif:HMM:NF019484.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189549.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: protein motif:HMM:NF016693.2
COORDINATES: similar to AA sequence:RefSeq:WP_008891740.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF020478.2
cell envelope integrity EipB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012566728.1
COORDINATES: protein motif:HMM:NF019247.2
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: similar to AA sequence:RefSeq:WP_008945694.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012554274.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011385213.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273384.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273385.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012225218.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF025759.2
COORDINATES: similar to AA sequence:RefSeq:WP_012566277.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436032.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198695.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977930.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF025230.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272445.1
COORDINATES: protein motif:HMM:NF006489.0
COORDINATES: similar to AA sequence:RefSeq:WP_011390287.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF018852.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF014604.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273372.1
COORDINATES: similar to AA sequence:RefSeq:WP_007089330.1
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004274081.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014816.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274080.1
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012554606.1
COORDINATES: protein motif:HMM:NF025665.2
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: protein motif:HMM:NF013257.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274175.1
COORDINATES: protein motif:HMM:NF024600.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012565965.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272308.1
COORDINATES: protein motif:HMM:NF014594.2
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014240148.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272304.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF021361.2
COORDINATES: similar to AA sequence:RefSeq:WP_019461641.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012567349.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0043115 - precorrin-2 dehydrogenase activity [Evidence IEA]; GO:0051266 - sirohydrochlorin ferrochelatase activity [Evidence IEA]; GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003628795.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274372.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567352.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567353.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247784.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: similar to AA sequence:RefSeq:WP_012040090.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274375.1
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: similar to AA sequence:RefSeq:WP_014199712.1
COORDINATES: protein motif:HMM:TIGR00481.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944973.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor guanylyltransferase MobA
COORDINATES: protein motif:HMM:NF014869.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273980.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272652.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_012565391.1
COORDINATES: similar to AA sequence:RefSeq:WP_011386159.1
COORDINATES: protein motif:HMM:NF021376.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189691.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008851848.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973705.1
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272458.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272457.1
COORDINATES: protein motif:HMM:NF025034.2
COORDINATES: protein motif:HMM:NF012306.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_019460047.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240143.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004273351.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025878.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272440.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272441.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273253.1
COORDINATES: similar to AA sequence:RefSeq:WP_014753116.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240139.1
COORDINATES: similar to AA sequence:RefSeq:WP_008889926.1
COORDINATES: protein motif:HMM:NF018978.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240136.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014332.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240134.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272890.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoN
COORDINATES: similar to AA sequence:RefSeq:WP_004272891.1
COORDINATES: similar to AA sequence:RefSeq:WP_014415961.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566430.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_008891222.1
COORDINATES: similar to AA sequence:RefSeq:WP_007089414.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: similar to AA sequence:RefSeq:WP_012974706.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_012974707.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: similar to AA sequence:RefSeq:WP_014248414.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_012566436.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_012566437.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274305.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566439.1
COORDINATES: similar to AA sequence:RefSeq:WP_008617504.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248421.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461486.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566442.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248121.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240114.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_014240113.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_014240112.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009539492.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_019644395.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240107.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248129.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016152.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274169.1
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008944189.1
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007439020.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439021.1
COORDINATES: protein motif:HMM:NF018024.2
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747620.1
COORDINATES: protein motif:HMM:NF004113.0
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: similar to AA sequence:RefSeq:WP_011388442.1
COORDINATES: protein motif:HMM:NF018259.2
COORDINATES: protein motif:HMM:NF017437.2
COORDINATES: protein motif:HMM:NF020859.2
Mu transposase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013499.2
GO:0003676 - nucleic acid binding [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF013395.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014825.2
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010505021.1
COORDINATES: protein motif:HMM:NF014336.2
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: protein motif:HMM:NF024671.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271594.1
COORDINATES: similar to AA sequence:RefSeq:WP_012778788.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611193.1
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271586.1
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: protein motif:HMM:NF021640.2
COORDINATES: similar to AA sequence:RefSeq:WP_014859395.1
COORDINATES: similar to AA sequence:RefSeq:WP_010937781.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF019590.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: similar to AA sequence:RefSeq:WP_008851393.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390682.1
COORDINATES: similar to AA sequence:RefSeq:WP_010543264.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008943497.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014238664.1
COORDINATES: protein motif:HMM:NF004634.0
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
ligand-binding sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012478.2
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF015022.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0030259 - lipid glycosylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566171.1
COORDINATES: similar to AA sequence:RefSeq:WP_014238609.1
GO:0050920 - regulation of chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272846.1
COORDINATES: protein motif:HMM:NF005071.0
COORDINATES: similar to AA sequence:RefSeq:WP_004272447.1
COORDINATES: protein motif:HMM:NF023123.2
COORDINATES: similar to AA sequence:RefSeq:WP_006558973.1
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012553472.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004272298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272299.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase class II
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_004271327.1
COORDINATES: similar to AA sequence:RefSeq:WP_003619631.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439213.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240661.1
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273577.1
COORDINATES: similar to AA sequence:RefSeq:WP_002730578.1
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273578.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016737833.1
ferredoxin family 2Fe-2S iron-sulfur cluster binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273579.1
COORDINATES: similar to AA sequence:RefSeq:WP_029308938.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239837.1
COORDINATES: similar to AA sequence:RefSeq:WP_008942788.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248222.1
COORDINATES: similar to AA sequence:RefSeq:WP_008493686.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271977.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271976.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273766.1
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272603.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
YbaL family putative K(+) efflux transporter
COORDINATES: similar to AA sequence:RefSeq:WP_013635105.1
COORDINATES: similar to AA sequence:RefSeq:WP_013635106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272604.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198192.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008943490.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272609.1
COORDINATES: similar to AA sequence:RefSeq:WP_008891763.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013035.2
COORDINATES: similar to AA sequence:RefSeq:WP_007424721.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012568680.1
hydrogen peroxide-inducible genes activator
COORDINATES: protein motif:HMM:NF023828.2
COORDINATES: protein motif:HMM:NF015709.2
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:NF006099.0
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_004273555.1
COORDINATES: protein motif:HMM:NF004196.0
COORDINATES: similar to AA sequence:RefSeq:WP_014744165.1
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274205.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274204.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274202.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274278.1
COORDINATES: protein motif:HMM:TIGR00792.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_009538517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240024.1
COORDINATES: similar to AA sequence:RefSeq:WP_008621144.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004274199.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004274198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274197.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274196.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004274477.1
COORDINATES: protein motif:HMM:NF021205.2
retroviral-like aspartic protease family protein
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274195.1
COORDINATES: similar to AA sequence:RefSeq:WP_009521756.1
COORDINATES: similar to AA sequence:RefSeq:WP_019459243.1
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012567390.1
GO:0015098 - molybdate ion transmembrane transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012567389.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004274574.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_010668377.1
COORDINATES: similar to AA sequence:RefSeq:WP_018308103.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272346.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747995.1
COORDINATES: similar to AA sequence:RefSeq:WP_019644857.1
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_019013238.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:NF012876.2
COORDINATES: similar to AA sequence:RefSeq:WP_019460697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390275.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422113.1
COORDINATES: similar to AA sequence:RefSeq:WP_008945845.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197072.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: similar to AA sequence:RefSeq:WP_012569033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274509.1
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274510.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745184.1
COORDINATES: protein motif:HMM:TIGR01786.1
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
COORDINATES: similar to AA sequence:RefSeq:WP_004274511.1
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_006559385.1
GO:0015663 - nicotinamide mononucleotide transmembrane transporter activity [Evidence IEA]
GO:0015890 - nicotinamide mononucleotide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019462938.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272420.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011385030.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241189.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012040467.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008890635.1
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_006558998.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272529.1
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_014190005.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: similar to AA sequence:RefSeq:WP_008945838.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_004272301.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187944.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462159.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273563.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
RHO alpha subunit C-terminal catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004273773.1
COORDINATES: protein motif:HMM:NF016903.2
COORDINATES: similar to AA sequence:RefSeq:WP_014752796.1
COORDINATES: similar to AA sequence:RefSeq:WP_010517678.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273771.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013640787.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189945.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188322.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_011930526.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274152.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274153.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188268.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274154.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274155.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012974054.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272745.1
COORDINATES: similar to AA sequence:RefSeq:WP_019644420.1
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188956.1
COORDINATES: similar to AA sequence:RefSeq:WP_003626663.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: protein motif:HMM:NF014624.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:TIGR03453.1
COORDINATES: similar to AA sequence:RefSeq:WP_012568916.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197686.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272737.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272736.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272735.1
COORDINATES: protein motif:HMM:NF027716.2
COORDINATES: similar to AA sequence:RefSeq:WP_008944637.1