Borrelia coriaceae strain Co53 plasmid lp38, complete sequence.
type: Entry
definition: Borrelia coriaceae strain Co53 plasmid lp38, complete sequence.
sequence version: NZ_CP075097.1
sequence date: 2023-05-09
sequence: sequence
division: CON
label: NZ_CP075097.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18441555
keyword: RefSeq
source: Borrelia coriaceae
organism: Borrelia coriaceae
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075097.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 141.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/09/2023 04:11:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,761\nCDSs (total) :: 1,723\nGenes (coding) :: 1,660\nCDSs (with protein) :: 1,660\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 31 of 63\nPseudo Genes (incomplete) :: 29 of 63\nPseudo Genes (internal stop) :: 16 of 63\nPseudo Genes (multiple problems) :: 12 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38423
topology: linear
so has quality: SO_0000987
location: 1..38423
location: region:1-38423:1
RO_0002162: 144

NZ_CP075097
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18441555
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (15-APR-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38423:1
position: 38423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38423:1:source
so part of: sequence
organism: Borrelia coriaceae
mol type: genomic DNA
strain: Co53
isolation source: tick tissue
host: Ornithodoros coriaceus
type material: type strain of Borrelia coriaceae
plasmid: lp38
country: USA: California
collection date: 1985

144
type: Taxonomy
SIO_000068: taxonomy

bcCo53_RS08075
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08075
old locus tag: bcCo53_001620
so part of: sequence
location: 1635..2456
location: region:1635-2456:1
so has part: feature:1635-2456:1:exon
subclass of: SO_0000010

position:1635:1
position: 1635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456:1
position: 2456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1635-2456:1:exon

bcCo53_RS08075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08075
old locus tag: bcCo53_001620
inference: COORDINATES: protein motif:HMM:NF017525.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRASP family complement regulator-acquiring lipoprotein
translation: MITNFFKKFLFISLLTTLGATENENSTVLIEQNLTELENIQNDNENTQHNHSLNLNEELLLQNDDRKEIKFIEAQKIGENADLIFNIIETATNNYNKITKDNKKIEKSDQEGMKTAFDKIILDNNKPLSQNTNKIYREALYLSLDWDINTLKNFKEQLIFSIEKVKTTHLHTQMVKIGINIQIYSEIALYTVCCNSKTKNNLYNKKLTTEDLKNIKTQIDEIMTLRKQWQALINKNNYIGFFHNELLKEAKEVLNNIKTINTEIQTILKDKKS
SIO_010081: bcCo53_RS08075
subclass of: SO_0000673
so part of: bcCo53_RS08075
location: 1635..2456
location: region:1635-2456:1
so has part: feature:1635-2456:1:exon

WP_025408595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1635-2456:1:exon

bcCo53_RS08080
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08080
old locus tag: bcCo53_001621
pseudo: true
so part of: sequence
location: complement(2701..3221)
location: region:2701-3221:-1
so has part: feature:2701-3221:-1:exon
subclass of: SO_0000010

position:2701:-1
position: 2701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3221:-1
position: 3221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701-3221:-1:exon

bcCo53_RS08080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08080
old locus tag: bcCo53_001621
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696762.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Bdr family repetitive protein
SIO_010081: bcCo53_RS08080
subclass of: SO_0000673
so part of: bcCo53_RS08080
location: complement(2701..3221)
location: region:2701-3221:-1
so has part: feature:2701-3221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701-3221:-1:exon

bcCo53_RS08085
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08085
old locus tag: bcCo53_001622
so part of: sequence
location: 4217..5314
location: region:4217-5314:1
so has part: feature:4217-5314:1:exon
subclass of: SO_0000010

position:4217:1
position: 4217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5314:1
position: 5314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4217-5314:1:exon

bcCo53_RS08085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08085
old locus tag: bcCo53_001622
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MMETKKPTNKYQHKLIVLISTLNYMNFKFKKYTQSDILYYFNNNIKKNSQKPAKIKTLQNYLYKLEKIFKITINYYRHLGVNMGTEINYILKYPKKECYHIINKYFKEKKETRHKNRVNAYLKKNCIKNSSVKKEECYYNYYNNKKEEKNKTKYIEKLQIKKYARKCNFKSNTFFSILDLKLEKNATIEILKILKRTENLIQNDIYKKKDDIKIRKSKTINKRLELNRILSEIFIGLKNKGYDEKQLTVQIQNIYNHYKNKPHFIIENNKYDDLEKIIKKLKKSITNTESTKKKDEREVKNNVFSILLDQFKHKIDIQILKDYLNKQDKLEYNKLFNSHYYYELLSIINSNINYLKSGKFENITS
SIO_010081: bcCo53_RS08085
subclass of: SO_0000673
so part of: bcCo53_RS08085
location: 4217..5314
location: region:4217-5314:1
so has part: feature:4217-5314:1:exon

WP_028328220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4217-5314:1:exon

bcCo53_RS08090
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08090
old locus tag: bcCo53_001623
so part of: sequence
location: 5324..5884
location: region:5324-5884:1
so has part: feature:5324-5884:1:exon
subclass of: SO_0000010

position:5324:1
position: 5324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5884:1
position: 5884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5324-5884:1:exon

bcCo53_RS08090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08090
old locus tag: bcCo53_001623
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MDNILERLKKKKLEIKVKKDRPIFIKIESKNNRTIYHTKIMNDLYIFGIHRRQKNKFFISFRELFNQDKIKALNLFSIRYNDKFLGIFYGYRKPVQNVVKKYEENGILKMSTFSKVYYIEFRFKKGSVCCYIKGLARLLKKEKIDTKYYKSLVEKFTSLEKQVYEFYDKKLTDGSLIKKWIEKKLQ
SIO_010081: bcCo53_RS08090
subclass of: SO_0000673
so part of: bcCo53_RS08090
location: 5324..5884
location: region:5324-5884:1
so has part: feature:5324-5884:1:exon

WP_025408593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5324-5884:1:exon

bcCo53_RS08095
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08095
old locus tag: bcCo53_001624
so part of: sequence
location: 5860..6615
location: region:5860-6615:1
so has part: feature:5860-6615:1:exon
subclass of: SO_0000010

position:5860:1
position: 5860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6615:1
position: 6615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5860-6615:1:exon

bcCo53_RS08095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08095
old locus tag: bcCo53_001624
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890338.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDRKKTTIITIASIKGGVGKSMISIVFSYLLKDMDKKILLIDLDPQNSLTSYFLKYIKNINDNNVYYLLKREQKVVFDKFLNRINDNMYIVPSHPILCKFEKENILYKELILEFYFDKNLSNYNFDYVIIDTPPSLSSLIYNALNVTDKVVVPIQTERWAVESFPILMDEIREVEMIRKKNIEVSIIENQFIKNRNTFKDIEKLLSIEYNNFIKGRVHFSNGIKVFINELREPNSQEIFYTEIKSALESIL
SIO_010081: bcCo53_RS08095
subclass of: SO_0000673
so part of: bcCo53_RS08095
location: 5860..6615
location: region:5860-6615:1
so has part: feature:5860-6615:1:exon

WP_028328219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5860-6615:1:exon

bcCo53_RS08100
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08100
old locus tag: bcCo53_001625
so part of: sequence
location: 6670..7215
location: region:6670-7215:1
so has part: feature:6670-7215:1:exon
subclass of: SO_0000010

position:6670:1
position: 6670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7215:1
position: 7215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6670-7215:1:exon

bcCo53_RS08100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08100
old locus tag: bcCo53_001625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002658520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MVGSRTKEIILNTRKSSIQYFENEELEYRSYKDQLRRIVIHDIDNKIKTMQILHQIRGKKLYLIDGYKKFEDFLSEFIISRSQAFLYLKIYKKVLDGSVSIEDIKQKGFKSVYRDVVNLATGSKSSKLSSIKPLKLQLKNQESYDFYKKNVKLTEFILDKLFSDEKKILKKLVNEFNSLKG
SIO_010081: bcCo53_RS08100
subclass of: SO_0000673
so part of: bcCo53_RS08100
location: 6670..7215
location: region:6670-7215:1
so has part: feature:6670-7215:1:exon

WP_025408592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6670-7215:1:exon

bcCo53_RS08825
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08825
so part of: sequence
location: 8030..8506
location: region:8030-8506:1
so has part: feature:8030-8506:1:exon
subclass of: SO_0000010

position:8030:1
position: 8030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8506:1
position: 8506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8030-8506:1:exon

bcCo53_RS08825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08825
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MFGSFGNALGDALGLTVVKFGDNKSAVGKHLDKVKKGLENTKNKLKELSGKISETKNADTKGVEDAIKNSSGVFEKLIESVTKLVGATSGDTDDIGHNAAPAAAPANRDNVEAFISGVKEIIKTATASGVKIEDSKGKEGSPVEKILILQLLCLVALL
SIO_010081: bcCo53_RS08825
subclass of: SO_0000673
so part of: bcCo53_RS08825
location: 8030..8506
location: region:8030-8506:1
so has part: feature:8030-8506:1:exon

WP_277813759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8030-8506:1:exon

bcCo53_RS08830
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08830
so part of: sequence
location: 8485..8877
location: region:8485-8877:1
so has part: feature:8485-8877:1:exon
subclass of: SO_0000010

position:8485:1
position: 8485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8877:1
position: 8877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8485-8877:1:exon

bcCo53_RS08830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08830
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLGGVTVTAAGTVAKLAGEVSQADPWAMIDKIKNATTKNDTASADNDNAEHGANAVGNNGATAANKADFAAAVALKSMIKNGKLNANAGDISAVKAVATIAVNKVLGTLDLIIRKTVESKLEEARKAVKE
SIO_010081: bcCo53_RS08830
subclass of: SO_0000673
so part of: bcCo53_RS08830
location: 8485..8877
location: region:8485-8877:1
so has part: feature:8485-8877:1:exon

WP_051428613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8485-8877:1:exon

bcCo53_RS08110
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08110
old locus tag: bcCo53_001627
so part of: sequence
location: 8900..9634
location: region:8900-9634:1
so has part: feature:8900-9634:1:exon
subclass of: SO_0000010

position:8900:1
position: 8900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9634:1
position: 9634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8900-9634:1:exon

bcCo53_RS08110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08110
old locus tag: bcCo53_001627
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633320.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKIRIKRICATLFISLFLSCNNGIEELEKRNHFLSSLANLGNDFLDVFTSFGDMATDAFGIKAETKKSDIVNYFTAIATTMKTVKEKLNVIMAENGNYEKVKGRVNAFIQTIEKIEKGAIAAASGIKDANGNLGDIGKSSNSSKGGDAISVGSLVKRIKTIVEVVLKEGDGEKDITDPFAKDKQKIGKLFGDSTGNGAEEKPIAAGASMGAVSGAYMLKAIAKSSDKVVDVKVKSKYITHCDHR
SIO_010081: bcCo53_RS08110
subclass of: SO_0000673
so part of: bcCo53_RS08110
location: 8900..9634
location: region:8900-9634:1
so has part: feature:8900-9634:1:exon

WP_025408589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8900-9634:1:exon

bcCo53_RS08115
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08115
old locus tag: bcCo53_001628
pseudo: true
so part of: sequence
location: 9896..>10257
location: region:9896-10257:1
so has part: feature:9896-10257:1:exon
subclass of: SO_0000010

position:9896:1
position: 9896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10257:1
position: 10257
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9896-10257:1:exon

bcCo53_RS08115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08115
old locus tag: bcCo53_001628
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539535.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Bdr family repetitive protein
SIO_010081: bcCo53_RS08115
subclass of: SO_0000673
so part of: bcCo53_RS08115
location: 9896..>10257
location: region:9896-10257:1
so has part: feature:9896-10257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9896-10257:1:exon

bcCo53_RS08120
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08120
old locus tag: bcCo53_001629
so part of: sequence
location: 10560..11612
location: region:10560-11612:1
so has part: feature:10560-11612:1:exon
subclass of: SO_0000010

position:10560:1
position: 10560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11612:1
position: 11612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10560-11612:1:exon

bcCo53_RS08120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08120
old locus tag: bcCo53_001629
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVRSICATLFISLFLSCNNGIEDLQKEKDFLSSLANLGKGFLDVFVSFGDMVTDTLDIKADTKKEDIGKYFINIEKTMISVKEKLQAEVAKNGYEKVKAVVDKFIIDVLDKIAEGSKKAAIGVGDAGVISNASESSGQEAEPAQAESVNALVKGIKTMVSVVLKDGEGSAEATKTTQNENKEIGKLFGQKSAATETVAAASASVGAVSGADILRAIAKSGDVSGTPVITSAQDAASIAVAQKQNTQTLNVAKKYAVIAAGIALRVMAKGGQFAANNDKKVVHAVNGAAASAVSKTLSTLIIAIRNTVDSGLKKINDALATVTQEDHSVAVIKTAEATSSTQQ
SIO_010081: bcCo53_RS08120
subclass of: SO_0000673
so part of: bcCo53_RS08120
location: 10560..11612
location: region:10560-11612:1
so has part: feature:10560-11612:1:exon

WP_025408587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10560-11612:1:exon

bcCo53_RS08125
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08125
old locus tag: bcCo53_001630
so part of: sequence
location: 11747..12799
location: region:11747-12799:1
so has part: feature:11747-12799:1:exon
subclass of: SO_0000010

position:11747:1
position: 11747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12799:1
position: 12799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11747-12799:1:exon

bcCo53_RS08125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08125
old locus tag: bcCo53_001630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNISIKSICAILFISLFLSCNNGIEELEKQRDSISSISKLRQDFLDIFTSFGDMFTDALGIKVDTKKSEIGGYFTQIAETMKKVKEKLTSEVAKNENYAKIETVVNELVKTIEKIGEGAKIVGNAIGTEGVELIGNVISANVSAPAAKGDTGDVNKLNRLIEGMKGIIEVVLGNVGNHDAGDTNKAQTGSARADDGAVKLFDGTTGPDSNAKTVAADAAKAVGSVTGADILQAMVKNDVAAKLAKNNAAIASVASNAKDSTISGAIALRAMAKGGQFANGNSGNDVTDTVKGVAVSAITKALNTLAVAIRKTIDAGLKKVQEAMKLGANATSLTADTGASKPQGK
SIO_010081: bcCo53_RS08125
subclass of: SO_0000673
so part of: bcCo53_RS08125
location: 11747..12799
location: region:11747-12799:1
so has part: feature:11747-12799:1:exon

WP_025408586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11747-12799:1:exon

bcCo53_RS08130
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08130
old locus tag: bcCo53_001631
pseudo: true
so part of: sequence
location: 13115..13798
location: region:13115-13798:1
so has part: feature:13115-13798:1:exon
subclass of: SO_0000010

position:13115:1
position: 13115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13798:1
position: 13798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13115-13798:1:exon

bcCo53_RS08130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08130
old locus tag: bcCo53_001631
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08130
subclass of: SO_0000673
so part of: bcCo53_RS08130
location: 13115..13798
location: region:13115-13798:1
so has part: feature:13115-13798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13115-13798:1:exon

bcCo53_RS08835
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08835
so part of: sequence
location: 13806..14033
location: region:13806-14033:1
so has part: feature:13806-14033:1:exon
subclass of: SO_0000010

position:13806:1
position: 13806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14033:1
position: 14033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13806-14033:1:exon

bcCo53_RS08835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08835
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLAAGASKGVGTQGGKEGVQGIGITAVNKLLVAVKDIIKKTVKNVLEKVKVEIDKAREPKEPIAESSNNRQDKPN
SIO_010081: bcCo53_RS08835
subclass of: SO_0000673
so part of: bcCo53_RS08835
location: 13806..14033
location: region:13806-14033:1
so has part: feature:13806-14033:1:exon

WP_241766573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13806-14033:1:exon

bcCo53_RS08135
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08135
old locus tag: bcCo53_001632
so part of: sequence
location: 14172..15221
location: region:14172-15221:1
so has part: feature:14172-15221:1:exon
subclass of: SO_0000010

position:14172:1
position: 14172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15221:1
position: 15221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14172-15221:1:exon

bcCo53_RS08135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08135
old locus tag: bcCo53_001632
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVRSICVTLFISLFLSCNNGIEELEKQRDFILSISNLRQSFLDIFTSFGDSLGGVLGFKSETKKSEIGDYFKTVKETVEGIKGKLNTIVTDMKNENNSNASGTEAAVAALNKKLDQIIQGAKTVSDAISSASDPIANVATGDASGIAGGEVDNLVKGIKSIVEVVLKEGKPDAGTENKADDLGARTGNGEGEAGKLFDDSSNAGSSPKKAAADAAKAVGAVTGADILKAISQGDNGDAAKLAKHNNSNGNAGNSKNDAVIAGGIALRAMAKGGKFANGSSADVSTSVRRVAVSAVTKALNALTIAIKKTIDEGLKTVKEAIKIEPNDTPLISDKDGSEAKS
SIO_010081: bcCo53_RS08135
subclass of: SO_0000673
so part of: bcCo53_RS08135
location: 14172..15221
location: region:14172-15221:1
so has part: feature:14172-15221:1:exon

WP_025408585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14172-15221:1:exon

bcCo53_RS08140
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08140
old locus tag: bcCo53_001633
pseudo: true
so part of: sequence
location: <15470..16444
location: region:15470-16444:1
so has part: feature:15470-16444:1:exon
subclass of: SO_0000010

position:15470:1
position: 15470
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16444:1
position: 16444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15470-16444:1:exon

bcCo53_RS08140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08140
old locus tag: bcCo53_001633
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633313.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08140
subclass of: SO_0000673
so part of: bcCo53_RS08140
location: <15470..16444
location: region:15470-16444:1
so has part: feature:15470-16444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15470-16444:1:exon

bcCo53_RS08145
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08145
old locus tag: bcCo53_001634
so part of: sequence
location: 16554..17483
location: region:16554-17483:1
so has part: feature:16554-17483:1:exon
subclass of: SO_0000010

position:16554:1
position: 16554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17483:1
position: 17483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16554-17483:1:exon

bcCo53_RS08145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08145
old locus tag: bcCo53_001634
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVRSICATLFISLFLSCNNGIEELQNQKDSILSISNLRQNFLDIFTSFSDMFTDAFGITATTTKKEVGEQLGKLGKAVSEVKDKLKELKENEQFSLIKKDKADEEITKVINTLENIVNGVDKIKDATANADDTGGDKDAKAADTGSIKNLVEGINFIYGAAKKTEIPLEGKAVKTIEDSGAVGKLFHNNSTANTPNVENALKGAQRAVIAANGADILAAIEAVKGKSSGQAVQIQNATNAFEIAISTASGANDLGSDVNTNASAIAAGLALRAMAQSGKLAAHFWWCESKRSEFNINRVSF
SIO_010081: bcCo53_RS08145
subclass of: SO_0000673
so part of: bcCo53_RS08145
location: 16554..17483
location: region:16554-17483:1
so has part: feature:16554-17483:1:exon

WP_051428610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16554-17483:1:exon

bcCo53_RS08150
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08150
old locus tag: bcCo53_001636
so part of: sequence
location: 17956..19035
location: region:17956-19035:1
so has part: feature:17956-19035:1:exon
subclass of: SO_0000010

position:17956:1
position: 17956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19035:1
position: 19035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17956-19035:1:exon

bcCo53_RS08150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08150
old locus tag: bcCo53_001636
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539666.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVRSICATLFISLFLSCNSGVIEELEKRNTFFDSLVNIGHGFQEILGSFGNTVGDALGFNAVKSGDPKSAVGKHFEKIKKGLENIKGKLDGLTKDITSTPHADTTGVETVINSASDVLTKLIDSVSKLAGVTNDSDPIGIANSGGAPSAADKAEVDTVIKSVSSIIEVAEESGVKIEPGNAGSEIAKASAQTDAIATFGGHNSGHAQAGAGDKLAVEVSKADPWAIINKIKHAIATVGAKLKTDTTNEAGGLAASNDKADNTAGAKSNADLAAAVALKAMIKGGKFSAASGDEGAVKGAATSAVNKVLGILNLIIRQTVESNLDKLRKAVKEMKYSEAIGTNSTQSGTATK
SIO_010081: bcCo53_RS08150
subclass of: SO_0000673
so part of: bcCo53_RS08150
location: 17956..19035
location: region:17956-19035:1
so has part: feature:17956-19035:1:exon

WP_025408583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17956-19035:1:exon

bcCo53_RS08155
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08155
old locus tag: bcCo53_001637
so part of: sequence
location: 19168..20250
location: region:19168-20250:1
so has part: feature:19168-20250:1:exon
subclass of: SO_0000010

position:19168:1
position: 19168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20250:1
position: 20250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19168-20250:1:exon

bcCo53_RS08155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08155
old locus tag: bcCo53_001637
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVKRICATLFISLFLSCNNGIEELEKRNQFLSSLANLGNDFLSVFTSFGDSLGGVLGFKEGSKKSDVANYFNKIQDTVQGTKDKLNTIVDNMKAQGNLNATAVESAVKTLIDNTLNNIIEGAKTASDAVGTDDKPLGDVADTNGGSKGESVDSLVKGIKDIVEVVLGVKEGNPDAGDAKTSVDESNGNAGALRATAAAGAGKLFGSDSAGAPGDAAKAAKDASKAVGAVTGADILQAIAKGVSGKAAELAKNASVNSNVAAADGAKDAEVAGAIAIRAMTKNGKFSGPTGGAKADVSAAVKGAAISAVTKALDILTIAIRRTIDEGLKAVKDAMKLNAETTPVISETGNATK
SIO_010081: bcCo53_RS08155
subclass of: SO_0000673
so part of: bcCo53_RS08155
location: 19168..20250
location: region:19168-20250:1
so has part: feature:19168-20250:1:exon

WP_025408582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19168-20250:1:exon

bcCo53_RS08160
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08160
old locus tag: bcCo53_001638
so part of: sequence
location: 20383..21435
location: region:20383-21435:1
so has part: feature:20383-21435:1:exon
subclass of: SO_0000010

position:20383:1
position: 20383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21435:1
position: 21435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20383-21435:1:exon

bcCo53_RS08160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08160
old locus tag: bcCo53_001638
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKSINIKSICATLFISLFLSCNNGIEELEKKNQFLSSLANLGNDFLSVFTSFGDSLGSVLGFNTKTTKSDVGKYFKNIENNLTTTKTSLEKIVSNMKDKGNPNATAAETAVNKLVKETLDKIIEGAKTASEAIGITGNDLLGNVAAQSQGGVAGTEVEKLIKGIKDIVDIVLKNDEGNAEAGDENKADDIASARGANAGDVGKLFATDTNIAANDKKAAADASKAVGAVTGADILQAIAKGASGEAAKLPNHKTVVGSLSVTSPKDAAVAGGIALRAMVKDGKFANGSSSVEESIRRAATSSVTKALDTLTTAVRKTIDEGFKIVRDAMKININDTLATSESGSSK
SIO_010081: bcCo53_RS08160
subclass of: SO_0000673
so part of: bcCo53_RS08160
location: 20383..21435
location: region:20383-21435:1
so has part: feature:20383-21435:1:exon

WP_025408581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20383-21435:1:exon

bcCo53_RS08165
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08165
old locus tag: bcCo53_001639
so part of: sequence
location: 21574..22245
location: region:21574-22245:1
so has part: feature:21574-22245:1:exon
subclass of: SO_0000010

position:21574:1
position: 21574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22245:1
position: 22245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21574-22245:1:exon

bcCo53_RS08165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08165
old locus tag: bcCo53_001639
inference: COORDINATES: protein motif:HMM:NF013599.2
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNIRIKSICATLFISLFLSCNNAGPELRDGQAATADGAVIDLRKISEKIGEVIAFSESVKEIEALIKSIDELAKGIGKKIQSSDLASDSDKNNSLLSGVYSLALDIIKRSKALRVSNSLQGKGLDTKISAVTTSTETFVSTLKSKNSVLGVSSGAATDDNAQKAIDRIKQSSGENGASELVKINTAIDALVDSTQGILKSVVKELTATSDKAETIKVN
SIO_010081: bcCo53_RS08165
subclass of: SO_0000673
so part of: bcCo53_RS08165
location: 21574..22245
location: region:21574-22245:1
so has part: feature:21574-22245:1:exon

WP_025408580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21574-22245:1:exon

bcCo53_RS08170
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08170
old locus tag: bcCo53_001640
pseudo: true
so part of: sequence
location: 22437..23496
location: region:22437-23496:1
so has part: feature:22437-23496:1:exon
subclass of: SO_0000010

position:22437:1
position: 22437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23496:1
position: 23496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22437-23496:1:exon

bcCo53_RS08170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08170
old locus tag: bcCo53_001640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014687021.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08170
subclass of: SO_0000673
so part of: bcCo53_RS08170
location: 22437..23496
location: region:22437-23496:1
so has part: feature:22437-23496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22437-23496:1:exon

bcCo53_RS08175
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08175
old locus tag: bcCo53_001641
pseudo: true
so part of: sequence
location: 23641..24708
location: region:23641-24708:1
so has part: feature:23641-24708:1:exon
subclass of: SO_0000010

position:23641:1
position: 23641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24708:1
position: 24708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23641-24708:1:exon

bcCo53_RS08175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08175
old locus tag: bcCo53_001641
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08175
subclass of: SO_0000673
so part of: bcCo53_RS08175
location: 23641..24708
location: region:23641-24708:1
so has part: feature:23641-24708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23641-24708:1:exon

bcCo53_RS08180
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08180
old locus tag: bcCo53_001643
so part of: sequence
location: 25322..26254
location: region:25322-26254:1
so has part: feature:25322-26254:1:exon
subclass of: SO_0000010

position:25322:1
position: 25322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26254:1
position: 26254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25322-26254:1:exon

bcCo53_RS08180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08180
old locus tag: bcCo53_001643
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRIKNICAILFIFLFLSCNNSGESEVGKLQKEKDFLYSLANLGNDFSNIFTSFGDTIGSVLGFNAETKKSEVADYFKKIQTTIEGTKTAFEKLVADMKAANNPNADAVEKEVEKLVSEKLNNIIEGSKIAFGAIDSDDDLLGNIAAVSGAEAVGSEVTKLIDGVKNIVKTGTDEAGKLFASDNAGTASNAKKSADILQAMIGSEPIAAAKLLKAKDGTIAGAIALRAMTKGGKFANATSSDGDYVAAVKGVAVGAVTKALNTLTIAIRKTIDEGLNKKVKDVMNITPETIPVTYDRNTPETKK
SIO_010081: bcCo53_RS08180
subclass of: SO_0000673
so part of: bcCo53_RS08180
location: 25322..26254
location: region:25322-26254:1
so has part: feature:25322-26254:1:exon

WP_051428609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25322-26254:1:exon

bcCo53_RS08185
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08185
old locus tag: bcCo53_001644
so part of: sequence
location: 26403..27080
location: region:26403-27080:1
so has part: feature:26403-27080:1:exon
subclass of: SO_0000010

position:26403:1
position: 26403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27080:1
position: 27080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26403-27080:1:exon

bcCo53_RS08185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08185
old locus tag: bcCo53_001644
inference: COORDINATES: protein motif:HMM:NF013599.2
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNINIKSICATLFISLFLFISCGNAGPVPKEGQAATADGTLINLKGIGDNIKGVVEFVMNIEEVKNLIVAIDELAKGIGKKINTSGSGIEADGSHGNNKNNGLIAGVYEIASLIETKAKGLQVGESFNDKELQTKVDIVKNKAEAFKSTLRSSHSNLGSGSAVTDINAQKAIDRKSHGSDGTYGAIQLAELYEAVNALMSTANEVLKGVIAPAKEVSPAN
SIO_010081: bcCo53_RS08185
subclass of: SO_0000673
so part of: bcCo53_RS08185
location: 26403..27080
location: region:26403-27080:1
so has part: feature:26403-27080:1:exon

WP_025408577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26403-27080:1:exon

bcCo53_RS08190
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08190
old locus tag: bcCo53_001645
so part of: sequence
location: 27266..28354
location: region:27266-28354:1
so has part: feature:27266-28354:1:exon
subclass of: SO_0000010

position:27266:1
position: 27266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28354:1
position: 28354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27266-28354:1:exon

bcCo53_RS08190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08190
old locus tag: bcCo53_001645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVRSICATLFISLFLSCNNGIVEELEKEKTFLSSLMDVGRSAENTYYSFMELVSDVLGFNVTKETTGTKVKEYFTGLASGIEKAIQELVKIKNNTEEFAKEETESAFNKTIEGFKDTLTTLKGYVESLKDIGDANQKVGEVGGSQNGAAADTEELKKALKALKGIVDIAKTQKVEEPKKNDVAISDANLVANTPKDGARALVTGKNAGASAGPGAAAIVSAVSGEAILAAIVAAQEDDASTGVPGGTASANTSAVAFAKGGTDQTNIANVAAKASAVAGGIALRSLVKTGKLAANDANNDKATVQAAGVAAVNKLLVALEDIIIKTVKKVLEKAKEKIDKSRDSQQNPVSQPSR
SIO_010081: bcCo53_RS08190
subclass of: SO_0000673
so part of: bcCo53_RS08190
location: 27266..28354
location: region:27266-28354:1
so has part: feature:27266-28354:1:exon

WP_025408576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27266-28354:1:exon

bcCo53_RS08195
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08195
old locus tag: bcCo53_001646
so part of: sequence
location: 28503..29567
location: region:28503-29567:1
so has part: feature:28503-29567:1:exon
subclass of: SO_0000010

position:28503:1
position: 28503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29567:1
position: 29567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28503-29567:1:exon

bcCo53_RS08195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08195
old locus tag: bcCo53_001646
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539573.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVKSICATLFISLFLSCNSGVIEELEKKNTFFDSLIKIGHGFQEIFGSFGDAFGFSAFKSGDKRSAVGAHFEKIKIGLKGTKDKLDEFATKISSIPYADTTIVKGEIKGANDVFDKLIAALTKLAGATNDSTNDIGNTASGAKAGVADKPEVEVVIAGVKEIIDAAVKSGVQIEQGKEGSPVGSASGDGATGVLVGKNNSSAPAANAGFKLADEVAKADPWAMIDKIKDANAGAELSATSEAGALATKIDTSNTAGAKTNADLAAATALKAMTKGSGKLTANGANNEPDAVKAAGVSAVNKVLGILDLIIRKTVANNLEKIKEAVKKITYSETEGTNATEAGTVTK
SIO_010081: bcCo53_RS08195
subclass of: SO_0000673
so part of: bcCo53_RS08195
location: 28503..29567
location: region:28503-29567:1
so has part: feature:28503-29567:1:exon

WP_025408575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28503-29567:1:exon

bcCo53_RS08200
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08200
old locus tag: bcCo53_001647
pseudo: true
so part of: sequence
location: 29708..30782
location: region:29708-30782:1
so has part: feature:29708-30782:1:exon
subclass of: SO_0000010

position:29708:1
position: 29708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30782:1
position: 30782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29708-30782:1:exon

bcCo53_RS08200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08200
old locus tag: bcCo53_001647
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08200
subclass of: SO_0000673
so part of: bcCo53_RS08200
location: 29708..30782
location: region:29708-30782:1
so has part: feature:29708-30782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29708-30782:1:exon

bcCo53_RS08205
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08205
old locus tag: bcCo53_001648
so part of: sequence
location: 31161..31859
location: region:31161-31859:1
so has part: feature:31161-31859:1:exon
subclass of: SO_0000010

position:31161:1
position: 31161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31859:1
position: 31859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31161-31859:1:exon

bcCo53_RS08205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08205
old locus tag: bcCo53_001648
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRNVLAICMLALMCFISCDINALNELLGKSKEKFLEENIRIKDLKSKKESQEVVKKQVGDIDNTKALDKGLSNLVAVKEDSINANGKDNIIVEDETKGFQWWDGSNEKTWENLDKMYIEARARVKSCYDIWMNAIATCHDADKALYQAISELNKVGERSVNIINGKDVIFAAEKKVDAAVEVLKRAEKAEEKANEDRKAADVYLSKVEATIEVFRNFLIDHEGVKESQMYD
SIO_010081: bcCo53_RS08205
subclass of: SO_0000673
so part of: bcCo53_RS08205
location: 31161..31859
location: region:31161-31859:1
so has part: feature:31161-31859:1:exon

WP_025408574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31161-31859:1:exon

bcCo53_RS08210
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08210
old locus tag: bcCo53_001649
so part of: sequence
location: complement(32251..32622)
location: region:32251-32622:-1
so has part: feature:32251-32622:-1:exon
subclass of: SO_0000010

position:32251:-1
position: 32251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32622:-1
position: 32622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32251-32622:-1:exon

bcCo53_RS08210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08210
old locus tag: bcCo53_001649
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539643.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNGIKKHINIIGSISTALFVCVSWIGTYAFKGFLVEFKKEMMGELRVEAEGRLKSEFESLKSFLKESLKKDIEKLDSHIKEMIGELEALLFKEQFKIKRAFKQELKKCFDALRSVEDINYDK
SIO_010081: bcCo53_RS08210
subclass of: SO_0000673
so part of: bcCo53_RS08210
location: complement(32251..32622)
location: region:32251-32622:-1
so has part: feature:32251-32622:-1:exon

WP_025408573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32251-32622:-1:exon

bcCo53_RS08215
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08215
old locus tag: bcCo53_001650
so part of: sequence
location: 32945..33616
location: region:32945-33616:1
so has part: feature:32945-33616:1:exon
subclass of: SO_0000010

position:32945:1
position: 32945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33616:1
position: 33616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32945-33616:1:exon

bcCo53_RS08215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08215
old locus tag: bcCo53_001650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKISEVKLYKVGEVVKILKENFKYETNNQILCRKAVTLNAYVTYNRIRYIPEDIICNLTTNIRKRDIKKNIEEIIEKKRENIIERIRIYDQRYGIPPIIAIKNIKSHSPNTNTIVQAILQLKEEISKQQEEISKQQEEISKQQEEIQKIQEELKEKNKEITKQQEEIQKIQEELKEKNKEITKQQEEIQNIKKQSQETIQINMLKEVKATLNHLVYKESNKN
SIO_010081: bcCo53_RS08215
subclass of: SO_0000673
so part of: bcCo53_RS08215
location: 32945..33616
location: region:32945-33616:1
so has part: feature:32945-33616:1:exon

WP_025408572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32945-33616:1:exon

bcCo53_RS08220
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08220
old locus tag: bcCo53_001651
so part of: sequence
location: 33925..35517
location: region:33925-35517:1
so has part: feature:33925-35517:1:exon
subclass of: SO_0000010

position:33925:1
position: 33925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35517:1
position: 35517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33925-35517:1:exon

bcCo53_RS08220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08220
old locus tag: bcCo53_001651
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MEYKITRTNSLTKKTTNFNSNNTKDQIKSILKSLVELNKDKTSADTKFIRVSQVKYQINRMLRRKLRLYKIYWIIDIKNAKYRKSCGVEEYSARDIYNVVIKMLKNDGQKTVCKRTIERDIKLLNEMGLLESKIIRFGENKGSMSFYKQNMQLAHLHKDITFKYLLHLLKTSLSDKKIVGNFDDSLEESNFNYTNLKKFGILSEIDEMNKKSVMSHRVDPHAFNNKANISNNKNSKELLFKNTDSSKPKKEECRFKRNDVETRLTCEHKISKNYLKQIKEHSNNDATYINALINLETAIDEYQSEYYIEDILEHFLKQFGNRYKYKIWMMMRRSDGVISDYDLIWEGRFRDWYPNKYKSNCAVKETYGDNLRIGIKKASVIKEKKAKEQLNVEELKEKEIEKEKEREEERKREADRLQKYLTGLFEREAKEREERLRKAREEELNLKKKARESMLATLEKSKERCVGLDISNNGMDKMIDASSNEDAMVKFAIRDEFGGFKTTKGLSMVNLGIMIEDMGQNDNLKEKESK
SIO_010081: bcCo53_RS08220
subclass of: SO_0000673
so part of: bcCo53_RS08220
location: 33925..35517
location: region:33925-35517:1
so has part: feature:33925-35517:1:exon

WP_025408571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33925-35517:1:exon

bcCo53_RS08225
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08225
old locus tag: bcCo53_001652
so part of: sequence
location: 35583..35984
location: region:35583-35984:1
so has part: feature:35583-35984:1:exon
subclass of: SO_0000010

position:35583:1
position: 35583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35984:1
position: 35984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35583-35984:1:exon

bcCo53_RS08225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08225
old locus tag: bcCo53_001652
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSREVQSKRTDKTIINFPILSSQDIDYEYVYAYLKDWVSKKYRAGHGIIINRVGDNYECETIQGALMSNILDMIFEDYKELFLGSLERESVDSKGKVGGIEPVDVLEGKGEIPFERLQGKQSKGFKKGKITIA
SIO_010081: bcCo53_RS08225
subclass of: SO_0000673
so part of: bcCo53_RS08225
location: 35583..35984
location: region:35583-35984:1
so has part: feature:35583-35984:1:exon

WP_197538494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35583-35984:1:exon

bcCo53_RS08230
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08230
old locus tag: bcCo53_001653
so part of: sequence
location: complement(36051..36587)
location: region:36051-36587:-1
so has part: feature:36051-36587:-1:exon
subclass of: SO_0000010

position:36051:-1
position: 36051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36587:-1
position: 36587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36051-36587:-1:exon

bcCo53_RS08230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS08230
old locus tag: bcCo53_001653
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MGLPQTIGITRQMVLNELIKAGINRDIADDLSYRYYHNELTFKDLELIKMELKSDIMSVKNELKSDIKDLDNKIDNKFNELDNKIENVENNLNNKIDNKFNELDNKINNVRNELKADIKDIDNKIDTVRNELKSYVSNEISIVRKDISNLEKNNKWIFGLTFALWLTILGGFIALILK
SIO_010081: bcCo53_RS08230
subclass of: SO_0000673
so part of: bcCo53_RS08230
location: complement(36051..36587)
location: region:36051-36587:-1
so has part: feature:36051-36587:-1:exon

WP_025408569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36051-36587:-1:exon

bcCo53_RS08235
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08235
old locus tag: bcCo53_001654
so part of: sequence
location: complement(36678..37436)
location: region:36678-37436:-1
so has part: feature:36678-37436:-1:exon
subclass of: SO_0000010

position:36678:-1
position: 36678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37436:-1
position: 37436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36678-37436:-1:exon

bcCo53_RS08235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08235
old locus tag: bcCo53_001654
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSLKKFFNRKTPITTIYKINPDEFILLSKHLIHSSSTIHNLLGIIMASGIPLTHLKDPNIKTPYNFKKNIILYALSNGLQFEQYSLFNSNDIANCIRNLDKHKLTSIHTYKINYIAKHIFNFRITTKQIQLIHSLIIKSKATLNNISYNHTHNIILERKPCILNLYDKIKYIKSFYLLKLNKNNLNHYKNNSNQTLATIATLVENFFLEHTSNKNLRTLKSYINLHLKKLGINYKYTNRIQHQLFSNIFLH
SIO_010081: bcCo53_RS08235
subclass of: SO_0000673
so part of: bcCo53_RS08235
location: complement(36678..37436)
location: region:36678-37436:-1
so has part: feature:36678-37436:-1:exon

WP_246938474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36678-37436:-1:exon

bcCo53_RS08240
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08240
old locus tag: bcCo53_001655
so part of: sequence
location: complement(37436..38173)
location: region:37436-38173:-1
so has part: feature:37436-38173:-1:exon
subclass of: SO_0000010

position:38173:-1
position: 38173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37436-38173:-1:exon

bcCo53_RS08240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08240
old locus tag: bcCo53_001655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKILLFLIPLVNIFAISEEEYYKRDKYSYFKRKLIRVKDWKTNFNNLKNIGKYFTESIENIKSTPDKELAYYFQHHFTTSLCSPMEKDADVVPKEHKPLFEKSYKFIKALKNQNPDQAAYLIYEIGDLNSMFSEAHEEIGTLYYLIKDKKIKHYNKYKNTDEKIKDIYDKIRQKYFSTINILEHNDINNNFNKFMLKFSELHKLVTHLYFNIIKLLVHARNHRTINHNYLDNIYNTDIHTINTT
SIO_010081: bcCo53_RS08240
subclass of: SO_0000673
so part of: bcCo53_RS08240
location: complement(37436..38173)
location: region:37436-38173:-1
so has part: feature:37436-38173:-1:exon

WP_246938475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37436-38173:-1:exon