Borrelia coriaceae strain Co53 plasmid lp33, complete sequence.
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
Submitted (15-APR-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP075095.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 141.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/09/2023 04:11:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,761\nCDSs (total) :: 1,723\nGenes (coding) :: 1,660\nCDSs (with protein) :: 1,660\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 31 of 63\nPseudo Genes (incomplete) :: 29 of 63\nPseudo Genes (internal stop) :: 16 of 63\nPseudo Genes (multiple problems) :: 12 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_015633307.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014468.2
COORDINATES: similar to AA sequence:RefSeq:WP_012539343.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012593116.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002658086.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:NF017525.2
CRASP family complement regulator-acquiring lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_010256195.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014687067.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539674.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539675.1
COORDINATES: similar to AA sequence:RefSeq:WP_014654069.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011187143.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010890591.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539565.1
COORDINATES: similar to AA sequence:RefSeq:WP_011187120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539680.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539568.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539569.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890586.1
COORDINATES: similar to AA sequence:RefSeq:WP_014687058.1
chromosome replication/partitioning protein
COORDINATES: similar to AA sequence:RefSeq:WP_012539685.1
COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539339.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012538140.1
BMP family ABC transporter substrate-binding protein