Borrelia coriaceae strain Co53 plasmid lp32, complete sequence.
type: Entry
definition: Borrelia coriaceae strain Co53 plasmid lp32, complete sequence.
sequence version: NZ_CP075094.1
sequence date: 2023-05-09
sequence: sequence
division: CON
label: NZ_CP075094.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18441555
keyword: RefSeq
source: Borrelia coriaceae
organism: Borrelia coriaceae
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075094.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 141.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/09/2023 04:11:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,761\nCDSs (total) :: 1,723\nGenes (coding) :: 1,660\nCDSs (with protein) :: 1,660\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 31 of 63\nPseudo Genes (incomplete) :: 29 of 63\nPseudo Genes (internal stop) :: 16 of 63\nPseudo Genes (multiple problems) :: 12 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32427
topology: linear
so has quality: SO_0000987
location: 1..32427
location: region:1-32427:1
RO_0002162: 144

NZ_CP075094
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18441555
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (15-APR-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32427:1
position: 32427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32427:1:source
so part of: sequence
organism: Borrelia coriaceae
mol type: genomic DNA
strain: Co53
isolation source: tick tissue
host: Ornithodoros coriaceus
type material: type strain of Borrelia coriaceae
plasmid: lp32
country: USA: California
collection date: 1985

144
type: Taxonomy
SIO_000068: taxonomy

bcCo53_RS07650
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07650
old locus tag: bcCo53_001532
so part of: sequence
location: 736..1485
location: region:736-1485:1
so has part: feature:736-1485:1:exon
subclass of: SO_0000010

position:736:1
position: 736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485:1
position: 1485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736-1485:1:exon

bcCo53_RS07650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07650
old locus tag: bcCo53_001532
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKLILLITITTNTFSICENIKKENTKYYDYDKYRYLKRKLVRVKNWKTNFNNLTNLGVYFTHQIEKIKSVLSLSDKELSLECKYKPNSNTCTPLSNNVAFRYHDIIKHYHTFINTLKHKNLDQAAYIIYEITELGAILSHTSETIVMFNYPRIQEFLKRYNKYKPIFIKLKDIYSKAKHDYNLTLNILKQNYTDNNFCKFMLKFVETHKIATHVYFNMDNLRFKCIDSGSSIPETINPYCTKLTSTIL
SIO_010081: bcCo53_RS07650
subclass of: SO_0000673
so part of: bcCo53_RS07650
location: 736..1485
location: region:736-1485:1
so has part: feature:736-1485:1:exon

WP_028328201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:736-1485:1:exon

bcCo53_RS07655
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07655
old locus tag: bcCo53_001533
pseudo: true
so part of: sequence
location: complement(1845..2184)
location: region:1845-2184:-1
so has part: feature:1845-2184:-1:exon
subclass of: SO_0000010

position:1845:-1
position: 1845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184:-1
position: 2184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2184:-1:exon

bcCo53_RS07655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07655
old locus tag: bcCo53_001533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683343.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Bdr family repetitive protein
SIO_010081: bcCo53_RS07655
subclass of: SO_0000673
so part of: bcCo53_RS07655
location: complement(1845..2184)
location: region:1845-2184:-1
so has part: feature:1845-2184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2184:-1:exon

bcCo53_RS07660
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07660
old locus tag: bcCo53_001534
so part of: sequence
location: 2553..3233
location: region:2553-3233:1
so has part: feature:2553-3233:1:exon
subclass of: SO_0000010

position:2553:1
position: 2553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233:1
position: 3233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553-3233:1:exon

bcCo53_RS07660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07660
old locus tag: bcCo53_001534
inference: COORDINATES: protein motif:HMM:NF015275.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MNIFIKLLVLYHTLLLYCCSEYQLNTGSNPDNTQSIEPPTLKIQEHRNENTQESNILTLTNEEKDKFNLLMFAFNKAFQELRNMIEAYQNGTLNHPRDLIEDYQHELNRYTSFVNWLSKDISKQKELANAFSPIYNLLEKERKLYANNITLEKHISNILTKGRHHYLEEYRNPVDNPVRSFFYHYVTFIRNTNEEMFEAFKEYIQSNTMIVQSLRDTVEFIPIPTQ
SIO_010081: bcCo53_RS07660
subclass of: SO_0000673
so part of: bcCo53_RS07660
location: 2553..3233
location: region:2553-3233:1
so has part: feature:2553-3233:1:exon

WP_025408645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2553-3233:1:exon

bcCo53_RS07665
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07665
old locus tag: bcCo53_001535
so part of: sequence
location: 3616..4347
location: region:3616-4347:1
so has part: feature:3616-4347:1:exon
subclass of: SO_0000010

position:3616:1
position: 3616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4347:1
position: 4347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3616-4347:1:exon

bcCo53_RS07665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07665
old locus tag: bcCo53_001535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKILLFLTAIINIAAIYEYEEEEEKLKQYDKYAYEKRKLTRVKDWKTNFKNLKSLSPFFTDEIENIKSYSDKELKHDFQFAFSFGLNSSTSDDIVPKEYKSLFEKSYKFINTLKHKNPDQTAYLIHEIYELDEMLTSTKRTLDIFKYDTYRQKFMKHNKYEHIFIKLKDIYSKATQEYFETFNILDHNDINNNFCKFMTKFTEIHNLASHIYFNMENLFKCTDTNTRTNNKTYCNKLTPTIQ
SIO_010081: bcCo53_RS07665
subclass of: SO_0000673
so part of: bcCo53_RS07665
location: 3616..4347
location: region:3616-4347:1
so has part: feature:3616-4347:1:exon

WP_025408644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3616-4347:1:exon

bcCo53_RS07670
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07670
old locus tag: bcCo53_001536
so part of: sequence
location: 4433..5161
location: region:4433-5161:1
so has part: feature:4433-5161:1:exon
subclass of: SO_0000010

position:4433:1
position: 4433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5161:1
position: 5161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4433-5161:1:exon

bcCo53_RS07670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07670
old locus tag: bcCo53_001536
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKILVFLTIIINLYAISEEEKEQRKKFDKYEYEKRKLVRVKNWKTNFKNLKNLGTYFTDEIENIKSKSDKELRHGFQFAFSISLCVGHDKNDDIVPKEYKSLFEKSYKFIQTLKKQNPEQAAYLIHEIYELDKMFTFTKEIIDMFNYAETQEFIKRYNKYKHIFIKLKDIYSKAKQEYFNAFNILNHNDINNNFCKFMLKFVEIHKLASHVYFNMEYLLHCAGNRKPESINPYCTKLTSTT
SIO_010081: bcCo53_RS07670
subclass of: SO_0000673
so part of: bcCo53_RS07670
location: 4433..5161
location: region:4433-5161:1
so has part: feature:4433-5161:1:exon

WP_025408643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4433-5161:1:exon

bcCo53_RS07675
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07675
so part of: sequence
location: 5559..6383
location: region:5559-6383:1
so has part: feature:5559-6383:1:exon
subclass of: SO_0000010

position:5559:1
position: 5559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6383:1
position: 6383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5559-6383:1:exon

bcCo53_RS07675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010259077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MAYAKPIITQQMVIAELIKAGINRDIATDLSFRYYRNELTYKDIEYLENTLNLKLEKIEANLKSDIKDLDNKIDNTENNLTAKTDNTKNELKSDIKDLDNKIDTVENNLNIKIDNVRNELKSDIKDLDNKIDTVENNLNIKIDNVRNELKSDIKDLDNKIDIVENNFNIKIDNVRNELKSDIKDLDNKIDIVKNELNVKIDNVKNELKSNIKTLDNKIDTVENNLNIKIDNVKNEISLIRKDISNLEKNNKWIFNLTFALWLTVLGGFIALILK
SIO_010081: bcCo53_RS07675
subclass of: SO_0000673
so part of: bcCo53_RS07675
location: 5559..6383
location: region:5559-6383:1
so has part: feature:5559-6383:1:exon

WP_025408642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5559-6383:1:exon

bcCo53_RS07680
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07680
old locus tag: bcCo53_001538
so part of: sequence
location: 6783..7883
location: region:6783-7883:1
so has part: feature:6783-7883:1:exon
subclass of: SO_0000010

position:6783:1
position: 6783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7883:1
position: 7883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7883:1:exon

bcCo53_RS07680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07680
old locus tag: bcCo53_001538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKDTEKNNNKHQHKLIILISTLNYMNLKLKKYTQSDILYYFNKNIKQNKYKSAKIKTLQNYLYKLNKIFGVTLNYYRHLGVNMGTEIHYSLKYSKKECYRIINKHFINKKEERHQNRVNAYLEKTCTKNSNVKKEECYYNTYNREKKNNTKCIEKIQVHKYATKCKFKTNTFFSILNLELKKNDTIEILKALKRTENFFQNGVYKKESAIKPKEIKLKNKQLELTKILNEMKIGLKNEGYNSEQLNTQIQNVYEYYKYKPHFIIESNKYNDLKKIIKKLKKTIGHVKITTKETEEMKNNIFSILLDQFKHKVDVSILAPILKSYLNKQDKLEYGKVFSNHYYYAILSIINNNKSCLKAEKFERIIS
SIO_010081: bcCo53_RS07680
subclass of: SO_0000673
so part of: bcCo53_RS07680
location: 6783..7883
location: region:6783-7883:1
so has part: feature:6783-7883:1:exon

WP_025408641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7883:1:exon

bcCo53_RS07685
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07685
old locus tag: bcCo53_001539
so part of: sequence
location: 7894..8454
location: region:7894-8454:1
so has part: feature:7894-8454:1:exon
subclass of: SO_0000010

position:7894:1
position: 7894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8454:1
position: 8454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7894-8454:1:exon

bcCo53_RS07685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07685
old locus tag: bcCo53_001539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MESILERLRKKELEIKGKRDKLIFVKIESNNNKTLYHTKIMKDLYAFGINKNQRNKFFISFRKLFNRERIESFHLFSLKDDDKFLGIFYGYRKPIKNVVTRYEDNGIMKTSTFSKAYYIEFRFKKGSVFCYLKEISYLLKKDKSNTKYSKFLIEKLANLEKQIYEFYGKNLPDGGFINKWIEKKLQ
SIO_010081: bcCo53_RS07685
subclass of: SO_0000673
so part of: bcCo53_RS07685
location: 7894..8454
location: region:7894-8454:1
so has part: feature:7894-8454:1:exon

WP_025408640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7894-8454:1:exon

bcCo53_RS07690
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07690
old locus tag: bcCo53_001540
so part of: sequence
location: 8430..9170
location: region:8430-9170:1
so has part: feature:8430-9170:1:exon
subclass of: SO_0000010

position:8430:1
position: 8430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9170:1
position: 9170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8430-9170:1:exon

bcCo53_RS07690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07690
old locus tag: bcCo53_001540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDRKKTTIITVASIKGGVGKSTSSIIFATLLSQKYKVLLIDMDTQASTTSYYSPKLSKLDVNLIDKNVYEVLKNNLSINNAIFVIDKNLDLIPSYLSLHQFNMEPIPFKEMKLKKQLKQLEIDYDYILIDTNPSLDFTLVNALVCSNYIIVPMTAEKWAVESLELFEFFVGKLDLSLSVFILVTRFRKNNTHKYLLDILRSKNNFLGTVSEREDLNKRLAEDSTFDLNKDYIHEYQKALDCFLREI
SIO_010081: bcCo53_RS07690
subclass of: SO_0000673
so part of: bcCo53_RS07690
location: 8430..9170
location: region:8430-9170:1
so has part: feature:8430-9170:1:exon

WP_028328198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8430-9170:1:exon

bcCo53_RS07695
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07695
old locus tag: bcCo53_001541
so part of: sequence
location: 9223..9765
location: region:9223-9765:1
so has part: feature:9223-9765:1:exon
subclass of: SO_0000010

position:9223:1
position: 9223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9765:1
position: 9765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9223-9765:1:exon

bcCo53_RS07695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07695
old locus tag: bcCo53_001541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKIKLNKRALEDRNLSEHEKILTHYNKLKEKLIINFKDEIFSKIETMKILKEIKDKGYYKLDGYKNFIDFILNFNLAKTQVYNYLKIATAMEEGLINDDFILKNGFNQTLSFIKTNNSATLKKSRQNSIKPLRFQLKSQESYTFYKQNAKFTGFILDKLFLSKKDLLEDFMKEFKSLEDC
SIO_010081: bcCo53_RS07695
subclass of: SO_0000673
so part of: bcCo53_RS07695
location: 9223..9765
location: region:9223-9765:1
so has part: feature:9223-9765:1:exon

WP_025408639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9223-9765:1:exon

bcCo53_RS07700
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07700
old locus tag: bcCo53_001542
so part of: sequence
location: 10725..11381
location: region:10725-11381:1
so has part: feature:10725-11381:1:exon
subclass of: SO_0000010

position:10725:1
position: 10725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11381:1
position: 11381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725-11381:1:exon

bcCo53_RS07700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07700
old locus tag: bcCo53_001542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633342.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MTKHIKSICATLFISLFLSCNNAGPELRDRQAAMADGTIIDLAEVGKKIKEAISFAEGVKEVHALVKSIDELAKGIGKKIQNNDNTLGDDTDKNTSLMAGVYSIGLDIVKKAKALKNLESIKDRDLEQKVDGVISASGEFVGKLRGQYTNLGASSGGTTDANAKNAIDKNDRTGGKGKEELVKLNAAIDELLKVINGLVETSINGLTIPANKEVTSQS
SIO_010081: bcCo53_RS07700
subclass of: SO_0000673
so part of: bcCo53_RS07700
location: 10725..11381
location: region:10725-11381:1
so has part: feature:10725-11381:1:exon

WP_025408638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10725-11381:1:exon

bcCo53_RS07705
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07705
old locus tag: bcCo53_001543
so part of: sequence
location: 11583..12650
location: region:11583-12650:1
so has part: feature:11583-12650:1:exon
subclass of: SO_0000010

position:11583:1
position: 11583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12650:1
position: 12650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11583-12650:1:exon

bcCo53_RS07705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07705
old locus tag: bcCo53_001543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVKSICATLFISLFLSCNNGIEELEKRNTFLSSLANLGNDFLSVFTSFGDTIGGVLGFNTNTKKSDVADYFKKIQTTLERTKTGLNNIVTNMKNDNNPNATATETAVNKLVNETLDKIIEGAKTVSEAVITVAEPLGDVAITSSAVGVGAEESSVKSLSEGIGKIVSVVLGQEGNAEAGDNNKSSGGGARSATAANDGEAGKLFVAESNGAGNSSDNANKVAADAAKAVGAVTGADILKAIVKENGGAAKLAKNSASTISGVTSLQDATLAGGIVLRAMAKSGKFANGKSSHDITTAVKGIAISAVTKALDTLTIAIRNTIDSGLKEVKKAMNINANYTPVTTETKN
SIO_010081: bcCo53_RS07705
subclass of: SO_0000673
so part of: bcCo53_RS07705
location: 11583..12650
location: region:11583-12650:1
so has part: feature:11583-12650:1:exon

WP_025408637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11583-12650:1:exon

bcCo53_RS07710
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07710
old locus tag: bcCo53_001544
pseudo: true
so part of: sequence
location: 12783..13840
location: region:12783-13840:1
so has part: feature:12783-13840:1:exon
subclass of: SO_0000010

position:12783:1
position: 12783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13840:1
position: 13840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12783-13840:1:exon

bcCo53_RS07710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07710
old locus tag: bcCo53_001544
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633324.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07710
subclass of: SO_0000673
so part of: bcCo53_RS07710
location: 12783..13840
location: region:12783-13840:1
so has part: feature:12783-13840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12783-13840:1:exon

bcCo53_RS07715
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07715
old locus tag: bcCo53_001545
pseudo: true
so part of: sequence
location: 14019..15007
location: region:14019-15007:1
so has part: feature:14019-15007:1:exon
subclass of: SO_0000010

position:14019:1
position: 14019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15007:1
position: 15007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019-15007:1:exon

bcCo53_RS07715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07715
old locus tag: bcCo53_001545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539497.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07715
subclass of: SO_0000673
so part of: bcCo53_RS07715
location: 14019..15007
location: region:14019-15007:1
so has part: feature:14019-15007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14019-15007:1:exon

bcCo53_RS07720
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07720
old locus tag: bcCo53_001547
pseudo: true
so part of: sequence
location: 15510..16584
location: region:15510-16584:1
so has part: feature:15510-16584:1:exon
subclass of: SO_0000010

position:15510:1
position: 15510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16584:1
position: 16584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15510-16584:1:exon

bcCo53_RS07720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07720
old locus tag: bcCo53_001547
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07720
subclass of: SO_0000673
so part of: bcCo53_RS07720
location: 15510..16584
location: region:15510-16584:1
so has part: feature:15510-16584:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15510-16584:1:exon

bcCo53_RS07725
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07725
old locus tag: bcCo53_001548
so part of: sequence
location: 16730..17389
location: region:16730-17389:1
so has part: feature:16730-17389:1:exon
subclass of: SO_0000010

position:16730:1
position: 16730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17389:1
position: 17389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16730-17389:1:exon

bcCo53_RS07725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07725
old locus tag: bcCo53_001548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633303.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNIKVKSICATLFISLFLSCNNSGPEPKELREGQAAMADGTVVDLSKLGKKIEDAVVFADGVKEISTLVKSVIEELPKVIAKKINGSGELTSDTGNKNGPLLAGIFTLILGIETKLTGLEKTSGISNEVKGKVSDAKSKVEAFLVKLKTNHSTLDQDAEIPKAINIKSDGSKGGNELKALNTAVDALLNTANGALAAVMKEFKEPAKAIPAQNN
SIO_010081: bcCo53_RS07725
subclass of: SO_0000673
so part of: bcCo53_RS07725
location: 16730..17389
location: region:16730-17389:1
so has part: feature:16730-17389:1:exon

WP_025408636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16730-17389:1:exon

bcCo53_RS07730
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07730
old locus tag: bcCo53_001549
pseudo: true
so part of: sequence
location: 17584..18628
location: region:17584-18628:1
so has part: feature:17584-18628:1:exon
subclass of: SO_0000010

position:17584:1
position: 17584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18628:1
position: 18628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17584-18628:1:exon

bcCo53_RS07730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07730
old locus tag: bcCo53_001549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07730
subclass of: SO_0000673
so part of: bcCo53_RS07730
location: 17584..18628
location: region:17584-18628:1
so has part: feature:17584-18628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17584-18628:1:exon

bcCo53_RS07735
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07735
old locus tag: bcCo53_001550
pseudo: true
so part of: sequence
location: 18765..19852
location: region:18765-19852:1
so has part: feature:18765-19852:1:exon
subclass of: SO_0000010

position:18765:1
position: 18765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19852:1
position: 19852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18765-19852:1:exon

bcCo53_RS07735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07735
old locus tag: bcCo53_001550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633351.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07735
subclass of: SO_0000673
so part of: bcCo53_RS07735
location: 18765..19852
location: region:18765-19852:1
so has part: feature:18765-19852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18765-19852:1:exon

bcCo53_RS07740
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07740
old locus tag: bcCo53_001551
so part of: sequence
location: 20215..20652
location: region:20215-20652:1
so has part: feature:20215-20652:1:exon
subclass of: SO_0000010

position:20215:1
position: 20215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20652:1
position: 20652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20215-20652:1:exon

bcCo53_RS07740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07740
old locus tag: bcCo53_001551
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MQNTALHSVGNTQVFNGHVTEDMIYQEFVKMGMQDYVANDLSKRYYRNELTYKDIEYLESNFNLKLEMLERSLRAEIMSVKIELDNKIETKFNELDNKIETKFNELDKKIDINEMKLKSTLRLHNWMFGTIITICLGILLTLIFK
SIO_010081: bcCo53_RS07740
subclass of: SO_0000673
so part of: bcCo53_RS07740
location: 20215..20652
location: region:20215-20652:1
so has part: feature:20215-20652:1:exon

WP_051480073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20215-20652:1:exon

bcCo53_RS07745
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07745
old locus tag: bcCo53_001552
pseudo: true
so part of: sequence
location: 20684..21730
location: region:20684-21730:1
so has part: feature:20684-21730:1:exon
subclass of: SO_0000010

position:20684:1
position: 20684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21730:1
position: 21730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20684-21730:1:exon

bcCo53_RS07745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07745
old locus tag: bcCo53_001552
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633347.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07745
subclass of: SO_0000673
so part of: bcCo53_RS07745
location: 20684..21730
location: region:20684-21730:1
so has part: feature:20684-21730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20684-21730:1:exon

bcCo53_RS07750
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07750
old locus tag: bcCo53_001553
so part of: sequence
location: 21860..22522
location: region:21860-22522:1
so has part: feature:21860-22522:1:exon
subclass of: SO_0000010

position:21860:1
position: 21860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22522:1
position: 22522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21860-22522:1:exon

bcCo53_RS07750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07750
old locus tag: bcCo53_001553
inference: COORDINATES: protein motif:HMM:NF013599.2
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNINIKSICATLFISLFLSCNNAGPVSRELRDGQATTADGTLINLKEIGDSIKGAVEFVMGIEEVDTLIKSVGEIAKGIGNKLTQNTAAIASQAGNNNGLIIVSAYNIISTLKAKVIELAKKDGIPAELKTKLDDVATKSQEFLDKVKKDGDLCKHDVTDDNAKKALDIKNVDKTKGANELETLNGAVAGLVNVAKTFLSEAYKTLEAPAKTVKE
SIO_010081: bcCo53_RS07750
subclass of: SO_0000673
so part of: bcCo53_RS07750
location: 21860..22522
location: region:21860-22522:1
so has part: feature:21860-22522:1:exon

WP_025408631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21860-22522:1:exon

bcCo53_RS07755
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07755
old locus tag: bcCo53_001554
so part of: sequence
location: 22701..23348
location: region:22701-23348:1
so has part: feature:22701-23348:1:exon
subclass of: SO_0000010

position:22701:1
position: 22701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23348:1
position: 23348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22701-23348:1:exon

bcCo53_RS07755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07755
old locus tag: bcCo53_001554
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633303.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNIKVRSICATLFISLFLSCNNSGGELKGDEVAKSTDIVPNLKEISEKIKKASDFAQSVKEIETLVKSIDELAKAIGKKVDASGINTEADKNDSLVAGVFQIIADLKTKLTAMEAQKVNVSDDLKGKIIAAKKISDDFLTKVKSQHNNLGQSAEAPKAIKKDNVDNTKGAKELADLNTAIDVLLKGANTAVESAIEELTRPTKREVTSKS
SIO_010081: bcCo53_RS07755
subclass of: SO_0000673
so part of: bcCo53_RS07755
location: 22701..23348
location: region:22701-23348:1
so has part: feature:22701-23348:1:exon

WP_038364924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22701-23348:1:exon

bcCo53_RS07760
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07760
old locus tag: bcCo53_001555
so part of: sequence
location: 23589..24578
location: region:23589-24578:1
so has part: feature:23589-24578:1:exon
subclass of: SO_0000010

position:23589:1
position: 23589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24578:1
position: 24578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23589-24578:1:exon

bcCo53_RS07760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07760
old locus tag: bcCo53_001555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MSLFLSCNNGIEELQKQNDSILSISNLRQGFLDIFTSFGDMVTDALGIKSDTKKEDIGKYFTAIEKTMTSVKEKLQAEVSKNGNYEKVREKVTSFIQTIEKIEKGAETAAGGAKGDEKIGGATKTGGQDATPAEADSVNKLVKGIGQIVGVVLENKGDATATKTEDNEQKTIAKLFSDNKSNSTDAIAAAASASIGAVSGADILKAIASSGDASDVAIDKAKDAASIAIAKKEDKSDLDASAKKDAIIAAGIALRAMAKGGKFAAKASEAKSAHAVNGAAASAVNKTLSTLIIAIRNTIDTGLKSIIDVLSKVKQEDKFVKPVETEKNK
SIO_010081: bcCo53_RS07760
subclass of: SO_0000673
so part of: bcCo53_RS07760
location: 23589..24578
location: region:23589-24578:1
so has part: feature:23589-24578:1:exon

WP_211228812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23589-24578:1:exon

bcCo53_RS07765
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07765
old locus tag: bcCo53_001556
so part of: sequence
location: 24708..25352
location: region:24708-25352:1
so has part: feature:24708-25352:1:exon
subclass of: SO_0000010

position:24708:1
position: 24708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25352:1
position: 25352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24708-25352:1:exon

bcCo53_RS07765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07765
old locus tag: bcCo53_001556
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633340.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKISIKTFCATLFISLFLSCNNGGPEIREGQVATADGTVIDLKAVSKKIKDTSAFASNVKEIHTLIKSVNELAKAIGKKIQQSSSGSDLADDSSNNKDGRLVSGAFKIIFTVKDKATALEGISEVSSGLKMKITDLIGKSTAFLVKLQEKHSELGKTDVNGDVAKKAIDIANGTVDHGASELKALNTTVDELLEAANAELEASIAELTIPAPSN
SIO_010081: bcCo53_RS07765
subclass of: SO_0000673
so part of: bcCo53_RS07765
location: 24708..25352
location: region:24708-25352:1
so has part: feature:24708-25352:1:exon

WP_025408629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24708-25352:1:exon

bcCo53_RS07770
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07770
old locus tag: bcCo53_001557
pseudo: true
so part of: sequence
location: 25553..26607
location: region:25553-26607:1
so has part: feature:25553-26607:1:exon
subclass of: SO_0000010

position:25553:1
position: 25553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26607:1
position: 26607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25553-26607:1:exon

bcCo53_RS07770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07770
old locus tag: bcCo53_001557
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07770
subclass of: SO_0000673
so part of: bcCo53_RS07770
location: 25553..26607
location: region:25553-26607:1
so has part: feature:25553-26607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25553-26607:1:exon

bcCo53_RS07775
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07775
old locus tag: bcCo53_001558
so part of: sequence
location: 26765..27415
location: region:26765-27415:1
so has part: feature:26765-27415:1:exon
subclass of: SO_0000010

position:26765:1
position: 26765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27415:1
position: 27415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26765-27415:1:exon

bcCo53_RS07775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07775
old locus tag: bcCo53_001558
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKVNIKNIRIKSICAILFISLFLSCNSGVIEELEKKKSFADSLLNIGYRFQEIFTSFGNTIGDALGFSAVKFDDTRDKVGVHFDKVKKGLEDTKGKLDGLAKEISSTPNADTKGVETVKTVIQGSNDVFDKLIGALTKLADVAKSASSLKIGENDNGNSVIADEEDVNKLAEGVKTIIEVANKFGVEIKPGTPGNPVTNTNYRTNNKILKINFQCK
SIO_010081: bcCo53_RS07775
subclass of: SO_0000673
so part of: bcCo53_RS07775
location: 26765..27415
location: region:26765-27415:1
so has part: feature:26765-27415:1:exon

WP_025408627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26765-27415:1:exon

bcCo53_RS07780
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07780
old locus tag: bcCo53_001559
pseudo: true
so part of: sequence
location: complement(<27679..>27957)
location: region:27679-27957:-1
so has part: feature:27679-27957:-1:exon
subclass of: SO_0000010

position:27679:-1
position: 27679
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:27957:-1
position: 27957
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27679-27957:-1:exon

bcCo53_RS07780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07780
old locus tag: bcCo53_001559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683270.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07780
subclass of: SO_0000673
so part of: bcCo53_RS07780
location: complement(<27679..>27957)
location: region:27679-27957:-1
so has part: feature:27679-27957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27679-27957:-1:exon

bcCo53_RS07785
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07785
old locus tag: bcCo53_001560
so part of: sequence
location: complement(28042..28731)
location: region:28042-28731:-1
so has part: feature:28042-28731:-1:exon
subclass of: SO_0000010

position:28042:-1
position: 28042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28731:-1
position: 28731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28042-28731:-1:exon

bcCo53_RS07785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07785
old locus tag: bcCo53_001560
inference: COORDINATES: protein motif:HMM:NF015275.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MKIIIKLLVLYSTTLFYCCNENESDIGFRHGKKHHGQTTETSIFKPPTPEITAPTNNEKTKSNSFINGLNIAINEIPKEIKNWPDNGKEIFTKFIIWLSKDIQKQKELEQAFSTAYNFLETKRQQYANNETFDQYIQNGIITKSYDYQNGKYGIHTDDVPQYSKGKLIGGISAGINFIRAFFSDILETITTEKNIDTNDNDKIFASIITTIQESTNDMIEEWKEEKVSK
SIO_010081: bcCo53_RS07785
subclass of: SO_0000673
so part of: bcCo53_RS07785
location: complement(28042..28731)
location: region:28042-28731:-1
so has part: feature:28042-28731:-1:exon

WP_025408625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28042-28731:-1:exon

bcCo53_RS07790
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07790
pseudo: true
so part of: sequence
location: 28968..29567
location: region:28968-29567:1
so has part: feature:28968-29567:1:exon
subclass of: SO_0000010

position:28968:1
position: 28968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29567:1
position: 29567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28968-29567:1:exon

bcCo53_RS07790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683343.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Bdr family repetitive protein
SIO_010081: bcCo53_RS07790
subclass of: SO_0000673
so part of: bcCo53_RS07790
location: 28968..29567
location: region:28968-29567:1
so has part: feature:28968-29567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28968-29567:1:exon

bcCo53_RS07795
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07795
old locus tag: bcCo53_001562
so part of: sequence
location: complement(29759..30751)
location: region:29759-30751:-1
so has part: feature:29759-30751:-1:exon
subclass of: SO_0000010

position:29759:-1
position: 29759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30751:-1
position: 30751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29759-30751:-1:exon

bcCo53_RS07795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07795
old locus tag: bcCo53_001562
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKNFKKPLSVIAIMSMLTSCELVADSISNQDGSTVAITQEMKNQIQKAIQNIDINNISENNIDEILNKFTKVELKPDSKRSEISTHFNNLKEILTIIKDTFNNKIDNNTTETIDKIIAAVTKLSGTTNANISIGEINSNSNTKASIISNTQSVQNIINEIKKIVEIAQTFGINIEKENNNNNNPVNATDNTKAPAALNGGNGGAGTGAGTALAKIVEEINASAMIDKISKAQIAHNNISNTNNNDAGQLITGTTSDGKGAGAKSKADFAAAVALKAMSEKGKFTDYTNNNENDDIQAVKQAAAEAVNKVLNGINTIIIDILKAEFKKIKN
SIO_010081: bcCo53_RS07795
subclass of: SO_0000673
so part of: bcCo53_RS07795
location: complement(29759..30751)
location: region:29759-30751:-1
so has part: feature:29759-30751:-1:exon

WP_025408624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29759-30751:-1:exon

bcCo53_RS07800
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07800
old locus tag: bcCo53_001563
so part of: sequence
location: complement(31395..32033)
location: region:31395-32033:-1
so has part: feature:31395-32033:-1:exon
subclass of: SO_0000010

position:31395:-1
position: 31395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32033:-1
position: 32033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31395-32033:-1:exon

bcCo53_RS07800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07800
old locus tag: bcCo53_001563
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTDIPLTHLNHKNIFIAKKNKNSIIYRANDTLEFTKYTLIVTNAIKSLINNTKLPIQAWKLNKLLHKFFDFKITTKDLHNIYTLILHKRKVFINNPTLFNSKVFDYKNSHIALVNKPTIQNIEKKLKHIHSFDIIKINHHNLNYYKNSRSRFKKLIASIIEEFFFSNTHSTHNHTIHKLKTHINLRLKEMEISYKSTYKYQLEILSNVFRN
SIO_010081: bcCo53_RS07800
subclass of: SO_0000673
so part of: bcCo53_RS07800
location: complement(31395..32033)
location: region:31395-32033:-1
so has part: feature:31395-32033:-1:exon

WP_025408623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31395-32033:-1:exon