Borrelia coriaceae strain Co53 plasmid lp31, complete sequence.
type: Entry
definition: Borrelia coriaceae strain Co53 plasmid lp31, complete sequence.
sequence version: NZ_CP075093.1
sequence date: 2023-05-09
sequence: sequence
division: CON
label: NZ_CP075093.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18441555
keyword: RefSeq
source: Borrelia coriaceae
organism: Borrelia coriaceae
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075093.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 141.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/09/2023 04:11:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,761\nCDSs (total) :: 1,723\nGenes (coding) :: 1,660\nCDSs (with protein) :: 1,660\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 31 of 63\nPseudo Genes (incomplete) :: 29 of 63\nPseudo Genes (internal stop) :: 16 of 63\nPseudo Genes (multiple problems) :: 12 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 30607
topology: linear
so has quality: SO_0000987
location: 1..30607
location: region:1-30607:1
RO_0002162: 144

NZ_CP075093
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18441555
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kneubehl, A.R.
author: Lopez, J.
journal: Submitted (15-APR-2021) Pediatrics-Tropical Medicine, Baylor College of Medicine, 1102 Bates Ave, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30607:1
position: 30607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30607:1:source
so part of: sequence
organism: Borrelia coriaceae
mol type: genomic DNA
strain: Co53
isolation source: tick tissue
host: Ornithodoros coriaceus
type material: type strain of Borrelia coriaceae
plasmid: lp31
country: USA: California
collection date: 1985

144
type: Taxonomy
SIO_000068: taxonomy

bcCo53_RS07515
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07515
old locus tag: bcCo53_001503
so part of: sequence
location: 153..1457
location: region:153-1457:1
so has part: feature:153-1457:1:exon
subclass of: SO_0000010

position:153:1
position: 153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457:1
position: 1457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153-1457:1:exon

bcCo53_RS07515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07515
old locus tag: bcCo53_001503
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFKNKYIVLSFTLSLACCRFFPTDNINLKPQKILDKANSIILDLNNNKKDQLPAIINSALPQINSITPNIDTATAKNILDSNTILQPILPDNKQDNLLKPIEIKNSDTTSHNNEQKQEISEQSTENTIQNTNSSITIQTIANTNSTTTPTNITEKTSTTKTDTKEDTPSLDTPTTYDNEKHILQQNSNAIQHPTNILRGNNSGTYLKGLNSESNNIQYTYTYNSHYYSKPTSISGSYFDSSIKTIEQNEFEFEENDDKYSKLETRLNNKYNFKLKNTINNVEQAIKLAEQIKDDLEIIAFNRIKLSNQGKMATESEKQQAKEKLSKFTKNKLESDLKNLLNTIEKTFNNANDLTNIPDYPSTFQTEQQAKSKLNELTSEINSLIIKMQKNNPNNHQVYPTLYYNYIDYYKYQTLFAKLQLVKNLLTRTGIVAR
SIO_010081: bcCo53_RS07515
subclass of: SO_0000673
so part of: bcCo53_RS07515
location: 153..1457
location: region:153-1457:1
so has part: feature:153-1457:1:exon

WP_246938464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153-1457:1:exon

bcCo53_RS07520
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07520
old locus tag: bcCo53_001504
so part of: sequence
location: 1647..1877
location: region:1647-1877:1
so has part: feature:1647-1877:1:exon
subclass of: SO_0000010

position:1647:1
position: 1647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877:1
position: 1877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1647-1877:1:exon

bcCo53_RS07520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07520
old locus tag: bcCo53_001504
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTHFLSLFVLGVIACNITPKTEQEQILGYIQDQNSQKTINSSIYPKENKEQTLNHMQDLHPKKEEKKEHTIQVQL
SIO_010081: bcCo53_RS07520
subclass of: SO_0000673
so part of: bcCo53_RS07520
location: 1647..1877
location: region:1647-1877:1
so has part: feature:1647-1877:1:exon

WP_246938465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1647-1877:1:exon

bcCo53_RS07525
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07525
old locus tag: bcCo53_001505
so part of: sequence
location: 2023..2313
location: region:2023-2313:1
so has part: feature:2023-2313:1:exon
subclass of: SO_0000010

position:2023:1
position: 2023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313:1
position: 2313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2023-2313:1:exon

bcCo53_RS07525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07525
old locus tag: bcCo53_001505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVFCTSYTNAQILKNAIEKLNKPDLIKDLQTLATSINNAKPQALINSIESLKQAIEQTYLVKDKNTTQAFKTVKDAGEAFITTINIAIIAYYRCIR
SIO_010081: bcCo53_RS07525
subclass of: SO_0000673
so part of: bcCo53_RS07525
location: 2023..2313
location: region:2023-2313:1
so has part: feature:2023-2313:1:exon

WP_028328289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2023-2313:1:exon

bcCo53_RS08795
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08795
so part of: sequence
location: 2457..2582
location: region:2457-2582:1
so has part: feature:2457-2582:1:exon
subclass of: SO_0000010

position:2457:1
position: 2457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582:1
position: 2582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2457-2582:1:exon

bcCo53_RS08795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYIQHTKQCAINLNKDNYTGGTTFANAIDTLIAAYKQANN
SIO_010081: bcCo53_RS08795
subclass of: SO_0000673
so part of: bcCo53_RS08795
location: 2457..2582
location: region:2457-2582:1
so has part: feature:2457-2582:1:exon

WP_281507461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2457-2582:1:exon

bcCo53_RS07530
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07530
old locus tag: bcCo53_001506
so part of: sequence
location: complement(2973..3815)
location: region:2973-3815:-1
so has part: feature:2973-3815:-1:exon
subclass of: SO_0000010

position:2973:-1
position: 2973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3815:-1
position: 3815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2973-3815:-1:exon

bcCo53_RS07530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07530
old locus tag: bcCo53_001506
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSIVAICMLTLMCLFSCDINFLNELLGKARDKFLEKNEAEKNLNSKEGNQEGKENQVDVSKFRKDVVTKRNLQEEKGIDIFQTKLTEDQESYLTAKDTEANEIKKKIDVNLAEINAIYDELKKSLSELENMKSDIISAKSDFEKARGSDGSSIDSGLKEKLFQAIEKIEGSKHIAVVGYKELFLELEHVLSHAGYAKNSSVSALGESEQVRSNGYYYIGYIVDNIYKAKTSLSDAENMFNEVKSKMDNFRDKMERVKIDFADLKGAHQVIQQALVVKK
SIO_010081: bcCo53_RS07530
subclass of: SO_0000673
so part of: bcCo53_RS07530
location: complement(2973..3815)
location: region:2973-3815:-1
so has part: feature:2973-3815:-1:exon

WP_028328290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2973-3815:-1:exon

bcCo53_RS07535
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07535
old locus tag: bcCo53_001507
so part of: sequence
location: complement(4050..4244)
location: region:4050-4244:-1
so has part: feature:4050-4244:-1:exon
subclass of: SO_0000010

position:4050:-1
position: 4050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4244:-1
position: 4244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050-4244:-1:exon

bcCo53_RS07535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07535
old locus tag: bcCo53_001507
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKNIKDIKVKSICATLFVSLFLSCNNNGIEELQKQKDFLSSLANLGNDFLTVFIPFFDMFTGA
SIO_010081: bcCo53_RS07535
subclass of: SO_0000673
so part of: bcCo53_RS07535
location: complement(4050..4244)
location: region:4050-4244:-1
so has part: feature:4050-4244:-1:exon

WP_028328291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4050-4244:-1:exon

bcCo53_RS08800
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08800
old locus tag: bcCo53_001508
so part of: sequence
location: complement(4375..4584)
location: region:4375-4584:-1
so has part: feature:4375-4584:-1:exon
subclass of: SO_0000010

position:4375:-1
position: 4375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4584:-1
position: 4584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4375-4584:-1:exon

bcCo53_RS08800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08800
old locus tag: bcCo53_001508
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MVKEVKLAAENGNQDDKAVQKVGITAVNKLLVAVEDIVKKTVKNVLAKAKGGIDKARETKEPVAQQKAN
SIO_010081: bcCo53_RS08800
subclass of: SO_0000673
so part of: bcCo53_RS08800
location: complement(4375..4584)
location: region:4375-4584:-1
so has part: feature:4375-4584:-1:exon

WP_051428637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4375-4584:-1:exon

bcCo53_RS08805
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08805
old locus tag: bcCo53_001509
pseudo: true
so part of: sequence
location: complement(4577..>4810)
location: region:4577-4810:-1
so has part: feature:4577-4810:-1:exon
subclass of: SO_0000010

position:4577:-1
position: 4577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4810:-1
position: 4810
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4577-4810:-1:exon

bcCo53_RS08805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08805
old locus tag: bcCo53_001509
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS08805
subclass of: SO_0000673
so part of: bcCo53_RS08805
location: complement(4577..>4810)
location: region:4577-4810:-1
so has part: feature:4577-4810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4577-4810:-1:exon

bcCo53_RS08810
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS08810
old locus tag: bcCo53_001510
so part of: sequence
location: complement(4851..5480)
location: region:4851-5480:-1
so has part: feature:4851-5480:-1:exon
subclass of: SO_0000010

position:4851:-1
position: 4851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5480:-1
position: 5480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4851-5480:-1:exon

bcCo53_RS08810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS08810
old locus tag: bcCo53_001510
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MTKNIKNIRVRSICATLFISLFLSLIIGCSQQADSNPQDMVADSNNNLVNLLDKAGEAFFGFLDFVTGSMRFTVTKDTSKSEVGKHFADLAKGLEKALAELEKVAEKAVTEADKDGLLTKAVKEAKDILNILKGHLDSLKDIGDSGTVGEVKSDNKQGVAADMGTLKKVYQALKGIVTTAKNEGVSELKESNLTLEPASIRRGYSKRWS
SIO_010081: bcCo53_RS08810
subclass of: SO_0000673
so part of: bcCo53_RS08810
location: complement(4851..5480)
location: region:4851-5480:-1
so has part: feature:4851-5480:-1:exon

WP_051428638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4851-5480:-1:exon

bcCo53_RS07545
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07545
old locus tag: bcCo53_001511
pseudo: true
so part of: sequence
location: complement(5610..6663)
location: region:5610-6663:-1
so has part: feature:5610-6663:-1:exon
subclass of: SO_0000010

position:5610:-1
position: 5610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6663:-1
position: 6663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5610-6663:-1:exon

bcCo53_RS07545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07545
old locus tag: bcCo53_001511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539573.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07545
subclass of: SO_0000673
so part of: bcCo53_RS07545
location: complement(5610..6663)
location: region:5610-6663:-1
so has part: feature:5610-6663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5610-6663:-1:exon

bcCo53_RS07550
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07550
old locus tag: bcCo53_001512
so part of: sequence
location: complement(7547..8647)
location: region:7547-8647:-1
so has part: feature:7547-8647:-1:exon
subclass of: SO_0000010

position:7547:-1
position: 7547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8647:-1
position: 8647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7547-8647:-1:exon

bcCo53_RS07550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07550
old locus tag: bcCo53_001512
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVKSICATLFISLFLSCNNSGESAEAEKRLTDVLMDVGRSTENAFYSFIELISDTLGLRVTRDTKKSQVGEYFSILGEKLGKTADALEQVAVKAVSDIDKDGLLSKAIREAVDSAKKTLEVLKGHLESLKDIGDSSQNIGEAVSNAGAKEGVAANQDKLKKVLTAFQGIVDEAVKVGVAKPEAGTLALNNATGVDNKDGAKILSTNSNTKPSPGDECKAATILATVSGKDMLASIVQSKENDSQIGGSGADGNTTAVSFAIGNSGSTVAQNSAKAAALAGGIALRSLVKDGKLARAAADGSAGEGKEIQGVGVTAVNKLLVAVEDLIKKTVKNAIGKAKEKINKAKSSQESVSEAGNK
SIO_010081: bcCo53_RS07550
subclass of: SO_0000673
so part of: bcCo53_RS07550
location: complement(7547..8647)
location: region:7547-8647:-1
so has part: feature:7547-8647:-1:exon

WP_038365162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7547-8647:-1:exon

bcCo53_RS07555
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07555
old locus tag: bcCo53_001513
pseudo: true
so part of: sequence
location: complement(8775..9861)
location: region:8775-9861:-1
so has part: feature:8775-9861:-1:exon
subclass of: SO_0000010

position:8775:-1
position: 8775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9861:-1
position: 9861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8775-9861:-1:exon

bcCo53_RS07555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07555
old locus tag: bcCo53_001513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539666.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07555
subclass of: SO_0000673
so part of: bcCo53_RS07555
location: complement(8775..9861)
location: region:8775-9861:-1
so has part: feature:8775-9861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8775-9861:-1:exon

bcCo53_RS07560
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07560
old locus tag: bcCo53_001514
so part of: sequence
location: complement(10007..11053)
location: region:10007-11053:-1
so has part: feature:10007-11053:-1:exon
subclass of: SO_0000010

position:10007:-1
position: 10007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11053:-1
position: 11053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10007-11053:-1:exon

bcCo53_RS07560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07560
old locus tag: bcCo53_001514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRVKSICATLFISLFLSCNNGIEELQKQRDSILSISNLRQGFLDIFTSFGDMLGGVLGIKADTKKEAIGKYFTDIADTIEKVKEKLSKVEVEYGKYPNVKTAVDKCIATLDKIVEGAKIAAGGATGSGTIGNVEQNQDANPADVTSVNALVKGIKTIIGIVFKQDEGKSDANVTDKNHNKTVGKLFNDKTNGAGEAEAAAASASIGAITGADILQAIAISKDAASGNKIETATNAAEIAAATMQLADKNIDIVDAQKDAVIAAGIALRAMAKGGKFSAKNDVKYVNAVKGAASSAVNKTLSTLIIAIRNTVDSGLKTISEALAAVKQGDVSSETSESGADK
SIO_010081: bcCo53_RS07560
subclass of: SO_0000673
so part of: bcCo53_RS07560
location: complement(10007..11053)
location: region:10007-11053:-1
so has part: feature:10007-11053:-1:exon

WP_028328307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10007-11053:-1:exon

bcCo53_RS07565
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07565
old locus tag: bcCo53_001515
so part of: sequence
location: complement(11215..12234)
location: region:11215-12234:-1
so has part: feature:11215-12234:-1:exon
subclass of: SO_0000010

position:11215:-1
position: 11215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12234:-1
position: 12234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11215-12234:-1:exon

bcCo53_RS07565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07565
old locus tag: bcCo53_001515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539666.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKVKSICVTLFISLFLSCNNGIEELEKRNTFLSSLAKLGNDFLSVFTSFGDSFGGTLGFNAVKSGDTGNAISAHFEKIGKGLGDTKGKLDGLAKEISSIPHADNTGVDGVIKEVSEVLTKLIDSVSRLAGVTKEAGKISDTNTSAAPPAGASAVDVKTVTEGVKAIIEIANEVAKNSGVNFIQKGNNGEQVKNATKAVEAPVGSNNNKASANAGPNLADEVSKADPWAMIAKIENAKTDGVILKGDDNNETGALAIGTNSSHSNVGAATTADLAAAVAFKAMTKTGKFSAQNDNEAVAVKAAAVSAVNKVLGIINFIIRKTINLELDKIKSAVQKIKYS
SIO_010081: bcCo53_RS07565
subclass of: SO_0000673
so part of: bcCo53_RS07565
location: complement(11215..12234)
location: region:11215-12234:-1
so has part: feature:11215-12234:-1:exon

WP_038365221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11215-12234:-1:exon

bcCo53_RS07570
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07570
old locus tag: bcCo53_001516
so part of: sequence
location: complement(12388..13440)
location: region:12388-13440:-1
so has part: feature:12388-13440:-1:exon
subclass of: SO_0000010

position:12388:-1
position: 12388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13440:-1
position: 13440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12388-13440:-1:exon

bcCo53_RS07570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07570
old locus tag: bcCo53_001516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVKSICATLFISLFLSCNNGIEELEKKNQFLNSIANLGKGFLSVFTALGDMVTDTLGIKTDTTKDAIGKYFTNIATTMKSVKEQLNAIMAENGNYAKVKEKVNEFIKTIEKIEEGAKTAAGGARGSDAIGGATKSGQDAASAKKDSVNLIVNGLKAIVGVVLDSNEGNPTFDRTTGSEKVNIGKIFSGVKGSDGKEVQAAAANASIGAVSGADILKAISKSGEATSSVAINTATDAASVAACTTGGAQTLSSSIQKDAVIAAGIALRAMAEGGKFASDTTDAAKAADAINGAAASAVNKTLNTLVIAIRNTVDGGLKTISETLTAVKQGDVSAETSESVATK
SIO_010081: bcCo53_RS07570
subclass of: SO_0000673
so part of: bcCo53_RS07570
location: complement(12388..13440)
location: region:12388-13440:-1
so has part: feature:12388-13440:-1:exon

WP_246938466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12388-13440:-1:exon

bcCo53_RS07575
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07575
old locus tag: bcCo53_001517
so part of: sequence
location: complement(13569..14609)
location: region:13569-14609:-1
so has part: feature:13569-14609:-1:exon
subclass of: SO_0000010

position:13569:-1
position: 13569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14609:-1
position: 14609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14609:-1:exon

bcCo53_RS07575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07575
old locus tag: bcCo53_001517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIRLKSICATLFISLFLSCNNGIEELEKRNSFLSSLANLGNDFLDIFTSFGGTLGGILGFNETTPKSDVGKYFKKVQDAVQGTKDKLEKIVANMERDNKPNADAVKKEVEKFINNTLSKIIEGARTASEAIGITGDDLIANIAQNASGVASTGVENLIKGIKSIVDIVLKDGGNAEAGDDKKADDLGSRTANAGDGEAGKLFGNTAIGSSPKKVAADAAKAVGAVTGADILKAMVKDNSDAVKFAKELTGNVSAIPKDAIIAGAIALRAMAKSGKFANGSASESKKVVEGAVVSAVTKALNTLTIAIRKTIDEGLKTVKDAMNINDAVAPVTIESDTVTK
SIO_010081: bcCo53_RS07575
subclass of: SO_0000673
so part of: bcCo53_RS07575
location: complement(13569..14609)
location: region:13569-14609:-1
so has part: feature:13569-14609:-1:exon

WP_038365298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14609:-1:exon

bcCo53_RS07580
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07580
old locus tag: bcCo53_001518
so part of: sequence
location: complement(14732..15778)
location: region:14732-15778:-1
so has part: feature:14732-15778:-1:exon
subclass of: SO_0000010

position:14732:-1
position: 14732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15778:-1
position: 15778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14732-15778:-1:exon

bcCo53_RS07580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07580
old locus tag: bcCo53_001518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKINIKNIKVGSICATLFISLFLSCNNGIEELEKQRDSILSISNLRQGFLDVFALFGDMVSDAFGIKADTTKEDIGRYFTNIADTMKSVKEKLNSIVAESGNYEKVKEKVNVFIKTIEKIEEGAKIAAGGAKGDAKIGGATVTGQEPTPADETSVNALVKGIKTIVGVLLESKGDPNATKTDGEKNKVVGKLFEKKASGTEEAAAAASASIGAITGADILKAIASSEKATENKDIDQASTAAEIAIAKANASGKQDIKEDARKDAVIAAGIALRAMAKSGKFAANNDAKHSNAVNGAAASAVNKTLSTLIIAIRNTVDSGLKIINKVLAEVKQEDQSSEVTASGTDTK
SIO_010081: bcCo53_RS07580
subclass of: SO_0000673
so part of: bcCo53_RS07580
location: complement(14732..15778)
location: region:14732-15778:-1
so has part: feature:14732-15778:-1:exon

WP_028328268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14732-15778:-1:exon

bcCo53_RS07585
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07585
old locus tag: bcCo53_001519
so part of: sequence
location: complement(15985..16653)
location: region:15985-16653:-1
so has part: feature:15985-16653:-1:exon
subclass of: SO_0000010

position:15985:-1
position: 15985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16653:-1
position: 16653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15985-16653:-1:exon

bcCo53_RS07585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07585
old locus tag: bcCo53_001519
inference: COORDINATES: protein motif:HMM:NF013599.2
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKINIKNIMIKSICATLFISLFLSCNNAGPELRDGQAAMADGRVIDLVEVSGKIKEVSTFVVNVKEIETLVKSIIDGISKGIKKKIGQNGLEDDSGAGAHYTPLLAGAYKVAEIIEKKSKELKVTEFFKGLEDKVKAVAHKAEEFVKKLRTSSADLGTASGAATDANAKKAIDINDSGKDKGASELITLNKAIGDLLNAANEVLKGTIKGVKEPARLEVVTK
SIO_010081: bcCo53_RS07585
subclass of: SO_0000673
so part of: bcCo53_RS07585
location: complement(15985..16653)
location: region:15985-16653:-1
so has part: feature:15985-16653:-1:exon

WP_028328311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15985-16653:-1:exon

bcCo53_RS07590
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07590
old locus tag: bcCo53_001520
so part of: sequence
location: complement(16772..17812)
location: region:16772-17812:-1
so has part: feature:16772-17812:-1:exon
subclass of: SO_0000010

position:16772:-1
position: 16772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17812:-1
position: 17812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16772-17812:-1:exon

bcCo53_RS07590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07590
old locus tag: bcCo53_001520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MSLFLSCNNGIEELQKRNTFLSSLANLGNDFLDVFTSFGDSLGGVLGFNASTKKSEVGDYFKKIETTVEGVKSKLNTIVENMKPEGNPNAEATAAVVKTLVSEKLDRIITGAKIASDTIGITGDELLGNVAAQNAGNAGTEVDNLVKGIKDIVDAVLKEGNADAGDANGPVKDATGAAGEARTASSGGTDGNAGKLFAKDGSGDAGNAAKAAKDASKAVGAVTGADILKAISTGVGSKAAVLALKILENVASVTAANQAKDVTIAGVIALRAMAKNGKFSGPSDGVKADVATAVKGAAVSAVTKALDTLTIAIRKTIDGGLKTVKDTIKINANDIPVTTESASATK
SIO_010081: bcCo53_RS07590
subclass of: SO_0000673
so part of: bcCo53_RS07590
location: complement(16772..17812)
location: region:16772-17812:-1
so has part: feature:16772-17812:-1:exon

WP_038365237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16772-17812:-1:exon

bcCo53_RS07595
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07595
old locus tag: bcCo53_001521
so part of: sequence
location: complement(17989..18879)
location: region:17989-18879:-1
so has part: feature:17989-18879:-1:exon
subclass of: SO_0000010

position:17989:-1
position: 17989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18879:-1
position: 18879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17989-18879:-1:exon

bcCo53_RS07595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07595
old locus tag: bcCo53_001521
inference: COORDINATES: protein motif:HMM:NF013114.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MFTSFGEMIGGILEFKAETPKSEVGKYFNNIADTIEKVKDKLTSDIANNEHYDKVRTLVDKFIVTLDVIAACTREASKVSKGSEPLGNMPNSATAGNPGEAEKLIKPIKTIVDLVLQEGNPNAGNDKKADDGQTPRANSNDNAGHLFANNNAGAGAANAKKAAADAAKAVGAVTGADILKAISQGEGGAAATLAKNTQNSGSVNAVNSAKDATVAGAIALRAMATGGKFAGQTTADDAIAIVKDAAASAVNKTLSTLIIAIRNTVDSGLKIINKVLAEVKQEDQSSEVTASGTDTK
SIO_010081: bcCo53_RS07595
subclass of: SO_0000673
so part of: bcCo53_RS07595
location: complement(17989..18879)
location: region:17989-18879:-1
so has part: feature:17989-18879:-1:exon

WP_277813770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17989-18879:-1:exon

bcCo53_RS07600
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07600
old locus tag: bcCo53_001522
so part of: sequence
location: complement(19034..19936)
location: region:19034-19936:-1
so has part: feature:19034-19936:-1:exon
subclass of: SO_0000010

position:19034:-1
position: 19034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19936:-1
position: 19936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19034-19936:-1:exon

bcCo53_RS07600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07600
old locus tag: bcCo53_001522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P12 family lipoprotein
translation: MNKNILAVYILVLLCLLSCDINALNELLSRARDKSLEVENTNVEALKVRKENKDFVEKQLDDINLFEAPVRVQKDMQEVFFNTEIPMYFQQGYPYYPQQKEVRIEKEDLVVITREEKEAQTEIDKVKSVLKEFQFGQLIENARELKDEYKDLESSFYHTFLELKAKIELLKMDHSREGKMKYRNEIQKLVQLHNDLNEQRSNLDMIMNQVDSGLSELGSAKGLFENAQKTLKEALIERLKNKSRSYSFPRRDKGGLLAKSAQSYAESALNQLESASSKLAGARGEKKDIEELVKDVRSFL
SIO_010081: bcCo53_RS07600
subclass of: SO_0000673
so part of: bcCo53_RS07600
location: complement(19034..19936)
location: region:19034-19936:-1
so has part: feature:19034-19936:-1:exon

WP_025408901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19034-19936:-1:exon

bcCo53_RS07605
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07605
old locus tag: bcCo53_001523
so part of: sequence
location: complement(20214..20363)
location: region:20214-20363:-1
so has part: feature:20214-20363:-1:exon
subclass of: SO_0000010

position:20214:-1
position: 20214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20363:-1
position: 20363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20214-20363:-1:exon

bcCo53_RS07605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07605
old locus tag: bcCo53_001523
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINIKNINIKSICATLFISLFLFCNNGIEELEKENTFLASLANLGNGF
SIO_010081: bcCo53_RS07605
subclass of: SO_0000673
so part of: bcCo53_RS07605
location: complement(20214..20363)
location: region:20214-20363:-1
so has part: feature:20214-20363:-1:exon

WP_155806453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20214-20363:-1:exon

bcCo53_RS07610
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07610
old locus tag: bcCo53_001524
so part of: sequence
location: complement(20367..20507)
location: region:20367-20507:-1
so has part: feature:20367-20507:-1:exon
subclass of: SO_0000010

position:20367:-1
position: 20367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20507:-1
position: 20507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20367-20507:-1:exon

bcCo53_RS07610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07610
old locus tag: bcCo53_001524
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVDLEKLVKINEITNELRAKVNALKSENDKFISRFKLDEREKRGT
SIO_010081: bcCo53_RS07610
subclass of: SO_0000673
so part of: bcCo53_RS07610
location: complement(20367..20507)
location: region:20367-20507:-1
so has part: feature:20367-20507:-1:exon

WP_155806870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20367-20507:-1:exon

bcCo53_RS07615
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07615
old locus tag: bcCo53_001525
so part of: sequence
location: complement(20504..20707)
location: region:20504-20707:-1
so has part: feature:20504-20707:-1:exon
subclass of: SO_0000010

position:20504:-1
position: 20504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20707:-1
position: 20707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20504-20707:-1:exon

bcCo53_RS07615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07615
old locus tag: bcCo53_001525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLFVLISCGSSGTSLKAGQALISSVDDLAKVIRQKLSTDVNGALTVVTIRLNEGLIARDIAGNTSY
SIO_010081: bcCo53_RS07615
subclass of: SO_0000673
so part of: bcCo53_RS07615
location: complement(20504..20707)
location: region:20504-20707:-1
so has part: feature:20504-20707:-1:exon

WP_025408902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20504-20707:-1:exon

bcCo53_RS07620
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07620
old locus tag: bcCo53_001526
so part of: sequence
location: complement(21084..24230)
location: region:21084-24230:-1
so has part: feature:21084-24230:-1:exon
subclass of: SO_0000010

position:21084:-1
position: 21084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24230:-1
position: 24230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21084-24230:-1:exon

bcCo53_RS07620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07620
old locus tag: bcCo53_001526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486467.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type ISP restriction/modification enzyme
translation: MNNKESLFEEYIASLEKTSIVDKTEHTDRSYLQYLLKNFINNPSITIQHEPRRSKEGFGSPDYIVKTNESIIGYIEVKKIEKNLDDTLKSPQIEKYKELSSNIILTNYIEFVLIRNKEVIEREILITKEELEKPYLKLDSTKVNKVINTLNRFFESIPQRIKNIEDLASFLSYRTKALKELIEKNLELSMSFNKINTLVATYNVLKENIYSSNFTINEFSDSISQTITYGLFIARLNNKNSEKIDFYNIKKFIPSNFSLIRDILKLIDDIETNNEYNSLKWILEEIINVVNNIDSELIFEEFSFTSSCLNSKDPYLYFYEDFLSKYDDDLRKAKGVYYTSYSVVSFITRSLHETLKTKFNFERGLANRDKVTVLDFATGTGTFLLEVIKEILKEIKKESGKQEYYINTHILKNIYGFEYLMTPYAVTHLKLSQYLKEVFNVDFNNKDNKLQVFLTNTLDITTIPDQKSFTGLFPAISEENELTNEVKRKPILVILGNPPYSSESKNNNEYILNLVKEYKQIKNMPLNEKNHKPLNDDYVKFIRFAEHKFEKPEEGLIGIITNNGYLDNITFRGMRYHLLSTFDEIYILNLHGNLRKKEKTDDNKIDENIFDIQTGVAIAIFAKYKDELKKNQLAHIYYKSIRGKREEKYNFLDRNNIFSIDFEKLEYCPPNYFFIKKDSSNADIYSKGISLIDIFIEKNSGIKTKKDRIAIDYTEKELLKKLNNFAYLSEQDARIKYDIKKDSMFWKLTEVQEFLKTTNINPSYIKEISYRPFDSRFTYYSKNPGVVIEPRYKLMRHLLEIENNIGLITTRLLSSNNFCHALITFKISDMCIVSNRTKESSYVFPLYVKEDQGVFKDIVKENFKTTFRAFINTKYGKKFTPEEILSYIYAVLYSSTYRTRFVEFLKIDFPQIIFVDNIEIFLKLSDLGKRLIDAHLLKYTSKLNSNIGVHIIDLNQNPNKVIANILYKEEVNELYYNDTSKLINIPIEVYEYTIGSYQVLKSYLKYRKGRILGINEIEHLEKVAKVIHFTINIQREIDSIVLSLKEFN
SIO_010081: bcCo53_RS07620
subclass of: SO_0000673
so part of: bcCo53_RS07620
location: complement(21084..24230)
location: region:21084-24230:-1
so has part: feature:21084-24230:-1:exon

WP_025408903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21084-24230:-1:exon

bcCo53_RS07625
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07625
old locus tag: bcCo53_001527
pseudo: true
so part of: sequence
location: complement(24640..>24759)
location: region:24640-24759:-1
so has part: feature:24640-24759:-1:exon
subclass of: SO_0000010

position:24640:-1
position: 24640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24759:-1
position: 24759
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24640-24759:-1:exon

bcCo53_RS07625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07625
old locus tag: bcCo53_001527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539526.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: bcCo53_RS07625
subclass of: SO_0000673
so part of: bcCo53_RS07625
location: complement(24640..>24759)
location: region:24640-24759:-1
so has part: feature:24640-24759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24640-24759:-1:exon

bcCo53_RS07630
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07630
old locus tag: bcCo53_001528
so part of: sequence
location: complement(24850..26088)
location: region:24850-26088:-1
so has part: feature:24850-26088:-1:exon
subclass of: SO_0000010

position:24850:-1
position: 24850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26088:-1
position: 26088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24850-26088:-1:exon

bcCo53_RS07630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07630
old locus tag: bcCo53_001528
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMGKDGVKDIYSEFNIIDFCKRNFEFLIRNIWLILFALFLFFFNVLHSHRGIASYTVGSNSNLYFTLPFTIVVIVVPSSILLYFLYLLRKRVTEGSVKSLVFAYLEKIAIFVLLVIGLITQSVSSWMSFESFFSLMFEDTIKDTVLSTQKSQIAKEEGIRKLLFDKEKIIEGEIASIDIKIKNNNDRIEFAKNKHLSLDYRYRTMKQDYMREIENASRENKDLFNQRNEYLESLQDLRFKLSSLIERAAVNNNKFKAANVLNGTSVVIARDDYLNIVFVYLLLLLSVCLDIFLAMVFCIIQNAYHKFYEQKLLHLVTLPTRRGVCVTGKIKNRQISNSEKYKKPFKMIDESLEFIASNLEDDKRTIKSLVKINKETNISDYRIRKYLSDLMSRGLVIKEKQRLILNVDDTLK
SIO_010081: bcCo53_RS07630
subclass of: SO_0000673
so part of: bcCo53_RS07630
location: complement(24850..26088)
location: region:24850-26088:-1
so has part: feature:24850-26088:-1:exon

WP_246938467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24850-26088:-1:exon

bcCo53_RS07635
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07635
old locus tag: bcCo53_001529
so part of: sequence
location: 26927..28492
location: region:26927-28492:1
so has part: feature:26927-28492:1:exon
subclass of: SO_0000010

position:26927:1
position: 26927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28492:1
position: 28492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26927-28492:1:exon

bcCo53_RS07635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07635
old locus tag: bcCo53_001529
inference: COORDINATES: protein motif:HMM:NF014468.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MNSLTKKTTNFNSNDTKEQIKSILKSLVALNKDKTSSATKFIRVSQVRYQINRMLRRKLRLYKIYWIIDIKNAKYRKSCGVEDYSARDIYNVVIKLLKNDGQKTVCKRTIERDIKLLNEMGLLESKIIRFGENKGSMSFYKQNMQLAHLHKDIIFKYLLHLLKTSLSDKKIVGNFDDSLEESNFNYTNLKKFGILSEIDEINNKSVMSHRVAPHAFNNKANISNNKNSKKLILKNNDSNKLKKEECKFKRNDVETRLICEHKISKNYLNQIKEYSNNDATYINALINLETAIDEYQSEYYIEDILEHFLKQFGNRYKYKIWMMMKRSDGVISDYALIWEGRFRDWYPNKYKSNCAVKETYGDNLRIGIKKASVVKEKRANEQLNVEELKEIEKEKEREEERKREAARLQKYLTGLFEREAKEREERLRKAREEELNLKKKARESMLATLEKSKERCVGLDISNNGMDKMIDASSNDDAMVKFAIRDEFGGFKTTKGMSMTNLGIMIEDVVQNDNLKEKESK
SIO_010081: bcCo53_RS07635
subclass of: SO_0000673
so part of: bcCo53_RS07635
location: 26927..28492
location: region:26927-28492:1
so has part: feature:26927-28492:1:exon

WP_246938468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26927-28492:1:exon

bcCo53_RS07640
type: Gene
subclass of: SO_0000704
RO_0002162: 144
locus tag: bcCo53_RS07640
old locus tag: bcCo53_001530
so part of: sequence
location: 28558..28959
location: region:28558-28959:1
so has part: feature:28558-28959:1:exon
subclass of: SO_0000010

position:28558:1
position: 28558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28959:1
position: 28959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28558-28959:1:exon

bcCo53_RS07640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
locus tag: bcCo53_RS07640
old locus tag: bcCo53_001530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSREVQSKRSDKKIINFPILSSQDIDYEYVYAYLKDWVSKKYRAGHGIIINRVVDNYECETIQGALMSNILDMIFEDYKELFLGSLERESVDSKGKVGGIEPVDVLEGKREVPFERLQGKQSKGFKKGKITIA
SIO_010081: bcCo53_RS07640
subclass of: SO_0000673
so part of: bcCo53_RS07640
location: 28558..28959
location: region:28558-28959:1
so has part: feature:28558-28959:1:exon

WP_246938469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28558-28959:1:exon

bcCo53_RS07645
type: Gene
subclass of: SO_0000704
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07645
so part of: sequence
location: complement(29026..29691)
location: region:29026-29691:-1
so has part: feature:29026-29691:-1:exon
subclass of: SO_0000010

position:29026:-1
position: 29026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29691:-1
position: 29691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29026-29691:-1:exon

bcCo53_RS07645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 144
gene: bdr
locus tag: bcCo53_RS07645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MALPQPIITQQMVIAELTKAGINKDIAIDLSYRYYRNELTYKDIEFLKENFDIKLEKVEALLQAEIQRVEASLQSEIKDLDNKIDNKFNELDNKINTVRNELKSDIKNLDNKIDNVENNLNNKIDNKFNELDNKIDNKFNELDNKINNVENNLNVKIDNKFNELDNKIDTVRNELKSYVSNEISIVRKDISNLEKNNKWIFGLTFALWLTILGGFIALILK
SIO_010081: bcCo53_RS07645
subclass of: SO_0000673
so part of: bcCo53_RS07645
location: complement(29026..29691)
location: region:29026-29691:-1
so has part: feature:29026-29691:-1:exon

WP_246938470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29026-29691:-1:exon