Methanosarcina barkeri 227 plasmid unnamed, complete sequence.
type: Entry
definition: Methanosarcina barkeri 227 plasmid unnamed, complete sequence.
sequence version: NZ_CP009529.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP009529.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03074573
keyword: RefSeq
source: Methanosarcina barkeri 227
organism: Methanosarcina barkeri 227
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP009529.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.3 and CLC v. 3.3 and Geneious\n v. 4.5\nGenome Coverage :: >20x\nSequencing Technology :: ABI 3730; 454 GS-FLX Titanium; Illumina\n GAIIx; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 12:22:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,796\nCDSs (total) :: 3,725\nGenes (coding) :: 3,574\nCDSs (with protein) :: 3,574\nGenes (RNA) :: 71\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 2\nPseudo Genes (total) :: 151\nCDSs (without protein) :: 151\nPseudo Genes (ambiguous residues) :: 0 of 151\nPseudo Genes (frameshifted) :: 86 of 151\nPseudo Genes (incomplete) :: 93 of 151\nPseudo Genes (internal stop) :: 59 of 151\nPseudo Genes (multiple problems) :: 70 of 151\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 39586
topology: circular
so has quality: SO_0000988
location: 1..39586
location: region:1-39586:1
RO_0002162: 1434106

NZ_CP009529
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03074573
type: BioSample
SIO_000068: biosample

1
title: Methanogenic archaea and the global carbon cycle
author: Henriksen, J.R.
author: Luke, J.
author: Reinhart, S.
author: Benedict, M.N.
author: Youngblut, N.D.
author: Metcalf, M.E.
author: Whitaker, R.J.
author: Metcalf, W.W.
journal: Unpublished

2
title: Direct Submission
author: Henriksen, J.R.
author: Luke, J.
author: Reinhart, S.
author: Benedict, M.N.
author: Youngblut, N.D.
author: Metcalf, M.E.
author: Whitaker, R.J.
author: Metcalf, W.W.
journal: Submitted (11-JUL-2014) Microbiology, University of Illinois at Urbana-Champaign, MC-110 601 S Goodwin Ave., Urbana, IL 61801, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39586:1
position: 39586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-39586:1:source
so part of: sequence
organism: Methanosarcina barkeri 227
mol type: genomic DNA
strain: 227
plasmid: unnamed
note: WWM760

1434106
type: Taxonomy
SIO_000068: taxonomy

MSBR2_RS20675
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS20675
so part of: sequence
location: complement(join(39480..39586,1..1741))
location: region:1-39586:-1
so has part: feature:1-1741:-1:exon
so has part: feature:39480-39586:-1:exon
subclass of: SO_0000010

68903553
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39586:-1
position: 39586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1741:-1:exon

position:1741:-1
position: 1741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39480-39586:-1:exon

position:39480:-1
position: 39480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSBR2_RS20675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS20675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PKD domain-containing protein
translation: MNKLYSVLIFLVFFGLGIPCASAANITSFIPQTVEMDMGLSQNVEILKDKVSDGTLGFNAMFSVLDSEVVEINTGSVLPVANFSTNISEGHAPLVVQFNDSSKNATSVSWNFGDETATSNESNPVHVFADPGNYTVNLTASNVNGTNSKLTTINVTNPVDWKYSPQEPVCGDTINVNGSASPEEKLNVLVTFEKNVSVSEGEYEYSLQNVSVVNELGNLFTVEATGVNNLNVRAKKVIWLTKSANASGDTAIVSRSNIPTGTYQIRIDGDAKEEVSEVNLKITASQTIQADSNGNFSYSYNTTAFPPGDFEVKVGNITKVIILGSKGEPVLPVANFSTNISEGHAPLVVQFNDSSKNATSVSWNFGDETATSNESNPVHVFADPGNYTVNLTASNVNGTNSKLTTINVTNPVDWKYSPQEPVCGDTINVNGSASPEEKLNVLVTFEKNVSVSEGEYEYSLQNVSVVNELGNLFTVEATGVNNLNVRAKKVIWLTKSANASGDTAIVSRSNIPTGIYQIRIDGDAKEEVSEVNLKITASQTIQADSNGNFSYSYNTTAFPPGDFEVKVGNITKVITLGSKGVWNQYPGTLKMMELLTLMKVTPFVSLQLPETTQLI
SIO_010081: MSBR2_RS20675
subclass of: SO_0000673
so part of: MSBR2_RS20675
location: complement(join(39480..39586,1..1741))
location: region:1-39586:-1
so has part: feature:1-1741:-1:exon
so has part: feature:39480-39586:-1:exon

WP_052725695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39480-39586:-1:exon

MSBR2_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00010
old locus tag: MSBR2_0001
so part of: sequence
location: complement(1803..2054)
location: region:1803-2054:-1
so has part: feature:1803-2054:-1:exon
subclass of: SO_0000010

24798916
type: Gene
SIO_000068: ncbigene

position:1803:-1
position: 1803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054:-1
position: 2054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803-2054:-1:exon

MSBR2_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00010
old locus tag: MSBR2_0001
inference: COORDINATES: protein motif:HMM:NF037272.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lectin like domain-containing protein
translation: MGDEHEKNINKKNDGTQSWGVNIFTAKSAELLKTVSSYITDSSCNYDIYINPVLGSTNQNYQVFFKNGLALVAGYYTISLDSD
SIO_010081: MSBR2_RS00010
subclass of: SO_0000673
so part of: MSBR2_RS00010
location: complement(1803..2054)
location: region:1803-2054:-1
so has part: feature:1803-2054:-1:exon

WP_048116259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1803-2054:-1:exon

MSBR2_RS20330
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS20330
old locus tag: MSBR2_0002
so part of: sequence
location: complement(2526..3839)
location: region:2526-3839:-1
so has part: feature:2526-3839:-1:exon
subclass of: SO_0000010

60339864
type: Gene
SIO_000068: ncbigene

position:2526:-1
position: 2526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3839:-1
position: 3839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526-3839:-1:exon

MSBR2_RS20330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS20330
old locus tag: MSBR2_0002
inference: COORDINATES: protein motif:HMM:NF040138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PKD domain-containing protein
translation: MKKLIIILALVGALSLVSIASAQFSSLQTWGSFGNDAGQFYGMSGIATDTSGNVYVAELDNRVQKFSGNGGYLTEFNIPARDIAIDSAGNIYATVNDSIQKFDSAGTLLNTWGSTGTENRYFNFPTGIALDSLGNIYVSDMKNNRIQKLDSSGNYLTSWGTLGSGNGNLKSPAGITVSGNYVYVADMGNYRVQKFGLDGTYVSSLGSKGTDNTQFNGSIAVANNPSGNIYVADYYNDRVIEYDSNFGYLAQYTGLSYPTALVLANDNLYVLGSGDYQVYQYNDDIHANFTANVTSGFAPLTVQFTNLSENADTIAWDFENDGSIDSGESNPVHEFTTPGNYTVNLTASNANGTDSALATINVFENVVFPGYTNSPTDLDHNGLCEDINGNGIVEFDDVVAYYANMDWMKENVPVTLFDYNNNNIIDFDDVVKLYNLL
SIO_010081: MSBR2_RS20330
subclass of: SO_0000673
so part of: MSBR2_RS20330
location: complement(2526..3839)
location: region:2526-3839:-1
so has part: feature:2526-3839:-1:exon

WP_052725692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2526-3839:-1:exon

MSBR2_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00020
old locus tag: MSBR2_0003
so part of: sequence
location: complement(3842..6316)
location: region:3842-6316:-1
so has part: feature:3842-6316:-1:exon
subclass of: SO_0000010

24798918
type: Gene
SIO_000068: ncbigene

position:3842:-1
position: 3842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6316:-1
position: 6316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3842-6316:-1:exon

MSBR2_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00020
old locus tag: MSBR2_0003
inference: COORDINATES: protein motif:HMM:NF024777.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LamG-like jellyroll fold domain-containing protein
translation: MVITEIKGNVDLMVNNRFFLLILIGILLLISCVQAAPTTYVTAVSDGLVVYYNGTLSGNSLVDLSGNSNTGYATSVTQKADLKTGTSYLSLNGVSSKIDVSNNAQTNISSPMSIEFYGSINSFTQYGALVSKHKNWATDWYLTCSSTSPYNHARFAAATSGGWKSYESDADLVAGQVYHIVATYDNSIAHVYINGEDAGSSTWNSPVTGGTENITIGSGYGLSNCNCSMYVFRLYNRVLSRAEVEQNYRNLTYIPPDDITMIKRLVYGDGGLPRYMGSYAIQQSDYGLNVLNNDLSINSSIGTSFYQDNNSELTNCSLVESTINGICWKNCYAPGSSAVLTYTGENRIVQDACFLSNDSFNLNHSVTYLAQTQVTKDGVPVNGSRAYEFYGDGLNTVNRKNVMLYTDNAEEQTNLLIVPNTSGDSTTGEEIRLNYQTRNASVTRSSLLDLPLSSPQLTPMPVPSGYLGALIFAEHADYTDHDSLRTVMYGTNNTGDPTYGKKGFIGHNLTATWSVFAVSSYGGEGLDSPELKSIVDDMYAHGFEITPHSLGASGEDYPDRAMAETYLPWYVTNYSYRNWIDHGLGNGKRNIGLKSCGWDSTSPHYIMDLFQQNNVPYAWAYIDVPIDEDIGTSKINSVGLPVDVVWQNTNLALNNSTPLYQWKSGFSGKGSALTYYTDDTIDDMLSTYGVSIWHDYWPDNSSLPGEESYNYYYDKTGHTINTTFDGLLSNISAQKQARKLWNPTVSQYIDYWIAASNVEVRCTGANTYTVVNHNPGTVEGFSMRVEGAYSPKLDGVALSTKTNGVDTIFWMDLSTGMHTITLEA
SIO_010081: MSBR2_RS00020
subclass of: SO_0000673
so part of: MSBR2_RS00020
location: complement(3842..6316)
location: region:3842-6316:-1
so has part: feature:3842-6316:-1:exon

WP_080941414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3842-6316:-1:exon

MSBR2_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00025
old locus tag: MSBR2_0004
so part of: sequence
location: complement(6697..9144)
location: region:6697-9144:-1
so has part: feature:6697-9144:-1:exon
subclass of: SO_0000010

24798919
type: Gene
SIO_000068: ncbigene

position:6697:-1
position: 6697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9144:-1
position: 9144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6697-9144:-1:exon

MSBR2_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00025
old locus tag: MSBR2_0004
inference: COORDINATES: protein motif:HMM:NF024777.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LamG-like jellyroll fold domain-containing protein
translation: MENIFKVLFGLLLLSMLAFPGAAAPVTNGLVASYNGNITGNVLLDESGNYNDGYLKNAVQGTLLSTGADYVSFSGSNSQANILNNASTNITSEISVEFIGSINEFSSYGAIVSKYSDENGTGWYLSCRSDPSLQKIVFGMFDTNGVLHHCRSDIYLEAGQVYDIVVTYDGNIVHVYVNGVDSSADESPVWAVPMSGNNYNTSIAYAENGLNYLNCSMLAFRLYDRALTLSEVQQNYQNDKWKYVPDISSEIIDLKKKAYGDGGLPRYMGSHAMSQSVSGVSVVDSNLSSLGSVSMPYYQDNGGAETDYNLLNSSISGVKWKNYYAPGSSALLSFFGDNRTRLENLSLLNNSLHLSNSVTYTEDTLVTKEAVPVIGNAFQFYGDGLNTISENAVQGYTVQAYTDNGEIQNDCIFNSSGNPIYNYYQNRTAGTTRNNSVDLLLSSPQLTPMPCPSGYLGSLSFAIHADAQDPDSLKTMMYGTNDIIEPEDSTQGYIGHELMCTWSAFAASSGGAGVGFDNVSFKATLDDMYAHGFEIVPHNVIGWAGEGNPTRDTTGYYLPWYASNYTSRNWIDHGLNGGNRNTGLKSLGLDKDSSQYYIGDLLREHEVQYAWAYQDQYGSPERGLSTSRIQSLGLPYDIVWTNTNFTWDDGTPMYEWTSTWAPDKTALNYFNNTALQNMIDSYGVCFWHDYTAYNGEAFEDYYYYKDNHTINEAYDNLLLNMSEQKKAGRLWNPTVSQYIDYWRAACNVECKCTGQDTYTLINHNSETVSGYAMRVTGSYSVKLDGNDLDTKMNGNDTVFWMNLSPGTHLLTIVRA
SIO_010081: MSBR2_RS00025
subclass of: SO_0000673
so part of: MSBR2_RS00025
location: complement(6697..9144)
location: region:6697-9144:-1
so has part: feature:6697-9144:-1:exon

WP_048116263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6697-9144:-1:exon

MSBR2_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00030
old locus tag: MSBR2_0005
so part of: sequence
location: complement(9406..11229)
location: region:9406-11229:-1
so has part: feature:9406-11229:-1:exon
subclass of: SO_0000010

24798920
type: Gene
SIO_000068: ncbigene

position:9406:-1
position: 9406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11229:-1
position: 11229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9406-11229:-1:exon

MSBR2_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00030
old locus tag: MSBR2_0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011302003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKDFDTDQNDQKTILELSNFTVFFGFKLPVQIYRSNRFQLLFTSISFILVSYSLLLIARKPAMGYEVSIYSSTPLIFWISLLFSLINGMFLLWSSISTRSSKQFNLGFFQIIFCNALLVLLPKLKNYMLIMGRGDNADYVGYAMDVSIYGYIPDYNFYPYTSVLISQIGQVLNTSALEVSKYIPSLFVIIYMLSIYCWAKSFKQDQNFIIYSIIASIPLFFAWFFSTIYYMLISTLILPLFFYTLNKNSDFRYRIFVVIICLVLPFTHPIVSLIFLLYLVCIYLEETLSDRNSHKVTLRLIMIFLITSSIWYLTQYALTKNAIVIFEQIENTLLQRGSDTTTLNVATGYFDKLGYLTAIRSFLIMTFDELTYYIFSLLSILFIFKNSEKGLKSISLCFVFGSIFYIFLFMSSQAHTPYRFINLDVNMIFTPLLLGYLMVSLRKQYKIVLNLLIVLSVITTVASLYQSPIITYPSDEFTAYDISGGKWLVDSKNEDIPTITLLSPLHRYSSLIYGSNYSSIHMSSVGPWSSFPTNLSSFETGVFPANITQYFLITEYEKQAYSTVWKGVGQVNESDLTSVNFCKNVYHIYDNQEFSIYLAKSCKEGE
SIO_010081: MSBR2_RS00030
subclass of: SO_0000673
so part of: MSBR2_RS00030
location: complement(9406..11229)
location: region:9406-11229:-1
so has part: feature:9406-11229:-1:exon

WP_048116265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9406-11229:-1:exon

MSBR2_RS19560
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS19560
so part of: sequence
location: 11729..11872
location: region:11729-11872:1
so has part: feature:11729-11872:1:exon
subclass of: SO_0000010

42569030
type: Gene
SIO_000068: ncbigene

position:11729:1
position: 11729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11872:1
position: 11872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11729-11872:1:exon

MSBR2_RS19560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS19560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAALPSAFADDTPEDKSLSVLIQERIEKASISLDNINFIPLSAAKR
SIO_010081: MSBR2_RS19560
subclass of: SO_0000673
so part of: MSBR2_RS19560
location: 11729..11872
location: region:11729-11872:1
so has part: feature:11729-11872:1:exon

WP_155396433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11729-11872:1:exon

MSBR2_RS18360
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS18360
old locus tag: MSBR2_0006
so part of: sequence
location: complement(12211..12882)
location: region:12211-12882:-1
so has part: feature:12211-12882:-1:exon
subclass of: SO_0000010

25418905
type: Gene
SIO_000068: ncbigene

position:12211:-1
position: 12211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12882:-1
position: 12882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12211-12882:-1:exon

MSBR2_RS18360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS18360
old locus tag: MSBR2_0006
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011302004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MSISINGIITHIVTYYSYLLKICKYITIAVDGIITPLILLMTRLMFIDTSLRPVWKIRGLILFPFIKCASVPYIGKNVYFIELLTRKYIFGKNVHISNFCKLIGPIEIGDNVSMSNNVEIRHHTVIGNNVGIGPNTLFITDTHELGNEKKRVGKHVTKKIIIGDGCWIGANVIILGGVTIGAGSVIAAGSVVATNIKPNSFVVGDRAKEIRTLRSMNSLRRSQ
SIO_010081: MSBR2_RS18360
subclass of: SO_0000673
so part of: MSBR2_RS18360
location: complement(12211..12882)
location: region:12211-12882:-1
so has part: feature:12211-12882:-1:exon

WP_230628773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12211-12882:-1:exon

MSBR2_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
gene: tnpA
locus tag: MSBR2_RS00040
old locus tag: MSBR2_0007
so part of: sequence
location: complement(13550..14017)
location: region:13550-14017:-1
so has part: feature:13550-14017:-1:exon
subclass of: SO_0000010

24798922
type: Gene
SIO_000068: ncbigene

position:13550:-1
position: 13550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14017:-1
position: 14017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14017:-1:exon

MSBR2_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
gene: tnpA
locus tag: MSBR2_RS00040
old locus tag: MSBR2_0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011305479.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MLELRSFSHGYGQITYHIVLVPKYRYSIFYNKRIKKDCELILNSICMEKGYKIHAMEVVDDHVHLFLEFHPSTSLSKVIQYLKGGSSYRLFKLHPEMRHQYWSGSLWSSGKFYRSIGNVTADTIKHYIKESQEKTKTEAQSQRLKKSRQRRINEF
SIO_010081: MSBR2_RS00040
subclass of: SO_0000673
so part of: MSBR2_RS00040
location: complement(13550..14017)
location: region:13550-14017:-1
so has part: feature:13550-14017:-1:exon

WP_048116267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13550-14017:-1:exon

MSBR2_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00050
old locus tag: MSBR2_0008
so part of: sequence
location: complement(16975..18228)
location: region:16975-18228:-1
so has part: feature:16975-18228:-1:exon
subclass of: SO_0000010

24798924
type: Gene
SIO_000068: ncbigene

position:16975:-1
position: 16975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18228:-1
position: 18228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16975-18228:-1:exon

MSBR2_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00050
old locus tag: MSBR2_0008
inference: COORDINATES: protein motif:HMM:TIGR02928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVISKKLSKLYSKQTIFRDKDYLKKGHHPRSLDEVLHRDHVIDIYTNCLRDVMHGDVPDNIFVYGTYGTGKTMLTKLITSEIALAAEVEGYKIRVIYIFCESYRSPSPLLRHINQELVNSIPNLENKMVGTSISRNFEYFCELVNLISIPIILIFDEIDKLNNPDIINQLSRIKECEFTQKNVCIIGITNDTIFYDNLDGRTKSIIGQNELFIPPYNAEELADILTARANLAFKDNVCENIVIPLCAAFGAQENGDARKAMDLLRLSGENAELRSSLKICEQDVKAAKGKVEINRQAEIIRKLPTQTKAVLFACTSRYEITGSNLETTEIYNSYLKIAEIISLDTVTLRRVGDYISELASIGILSINKISRGRKRGVVNFVKPITDTYIIEQTILQDPRFEELQRRSSDSFTANFEV
SIO_010081: MSBR2_RS00050
subclass of: SO_0000673
so part of: MSBR2_RS00050
location: complement(16975..18228)
location: region:16975-18228:-1
so has part: feature:16975-18228:-1:exon

WP_196297266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16975-18228:-1:exon

MSBR2_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
gene: asnB
locus tag: MSBR2_RS00055
old locus tag: MSBR2_0009
so part of: sequence
location: complement(18769..20712)
location: region:18769-20712:-1
so has part: feature:18769-20712:-1:exon
subclass of: SO_0000010

24798925
type: Gene
SIO_000068: ncbigene

position:18769:-1
position: 18769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20712:-1
position: 20712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18769-20712:-1:exon

MSBR2_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
gene: asnB
locus tag: MSBR2_RS00055
old locus tag: MSBR2_0009
EC number: 6.3.5.4
inference: COORDINATES: protein motif:HMM:TIGR01536.1
GO function: GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine synthase (glutamine-hydrolyzing)
translation: MCGIAGILDLKNEQVSTNRIKKMCDVMHHRGPDDTGYYFNGNIGLGHKRLSIIDLSRGKQPVYNEDKSISIVFNGEIYNYLELITELKENGHIFYTSSDTEVIIHLYEEHGEKCVEYLNGMFSFAIWDSNRKKLFLARDRLGVKPLYYAYKEEKIIFASEIKAILQSEYITAEPNYPAIMDYMTLTYVTGEKTFFKGINKLMPGYILVVENSHVEVKKYWDLELKPDYKHEEQYFIDKLEYLLRDSVKITLRSDVPLGCHLSGGLDSSTVCCLASSILNHPIKTFTGAFSEGSKYDETNYAKCVASYVNAEYFEIYPEVEDFGELLRKLTWYLDEPVVGPGVVPQYFVSKLVSENVKVVLGGQGGDEIFAGYLRHLQFSYEMEMLEHPCRSLFSITRFGGLKGLTLFSALFFLNGTSFEPRNRYFQIISESFITKRELNKLFTEKFYKELGEYDCFKSFCETLENIDRKNYKYIPFYCDIKNYLPGLLQVEDRTSMMNSVESRVPLLDHRIVEFSATIPQELKIKNYTLKYIFKQTIKKWIPTEIYNRKDKKGFPTPTNEWFKKFNQEIRDILLDPVAVERGIYNTEYVEKILKNIRGSKGLHKKFIWKLLCVELWFKVFIDNKDYLEGKTTIETLLNKQSPLTLTA
SIO_010081: MSBR2_RS00055
subclass of: SO_0000673
so part of: MSBR2_RS00055
location: complement(18769..20712)
location: region:18769-20712:-1
so has part: feature:18769-20712:-1:exon

WP_052712625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18769-20712:-1:exon

MSBR2_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00060
old locus tag: MSBR2_0010
so part of: sequence
location: 21672..22436
location: region:21672-22436:1
so has part: feature:21672-22436:1:exon
subclass of: SO_0000010

24798926
type: Gene
SIO_000068: ncbigene

position:21672:1
position: 21672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22436:1
position: 22436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21672-22436:1:exon

MSBR2_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00060
old locus tag: MSBR2_0010
inference: COORDINATES: protein motif:HMM:NF022077.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MARIVTINNVKGGVAKTTTATNLAAGLARRGKRVLLIDSDPQANASSNLYPGLRAEKTIKDLFQGTPITEIISPSVETGLEIIPSCLAFSTIELELAAQLARETVLKRLLKPIEGNYDIILIDTQPSVGVIPINALCAADEVIIPVHEAYALDAMSQMVNVILQVKQALNPDLVIGGILLTMYDTRTTLAKEIRERLLNKFGAILFETTIPRNIRLAECPTHKKSIFEYAPESAGAIAYQKLTEEVMKRWGMIQ
SIO_010081: MSBR2_RS00060
subclass of: SO_0000673
so part of: MSBR2_RS00060
location: 21672..22436
location: region:21672-22436:1
so has part: feature:21672-22436:1:exon

WP_048116273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21672-22436:1:exon

MSBR2_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00065
old locus tag: MSBR2_0011
so part of: sequence
location: 22433..22798
location: region:22433-22798:1
so has part: feature:22433-22798:1:exon
subclass of: SO_0000010

24798927
type: Gene
SIO_000068: ncbigene

position:22433:1
position: 22433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22798:1
position: 22798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22433-22798:1:exon

MSBR2_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00065
old locus tag: MSBR2_0011
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTAIGNTTIDENDNIGALLGQQQMQIEKNTENREEIPVAVGKKEKGKIGKQEGNTGDEKLKHNRSAKFTDLEVEQLDKIMLAIGTDKVSKALRWCLSKAWEVNGDEVERIAEEKKKIGIL
SIO_010081: MSBR2_RS00065
subclass of: SO_0000673
so part of: MSBR2_RS00065
location: 22433..22798
location: region:22433-22798:1
so has part: feature:22433-22798:1:exon

WP_048116275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22433-22798:1:exon

MSBR2_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00070
so part of: sequence
location: complement(23277..23684)
location: region:23277-23684:-1
so has part: feature:23277-23684:-1:exon
subclass of: SO_0000010

24798928
type: Gene
SIO_000068: ncbigene

position:23277:-1
position: 23277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23684:-1
position: 23684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23277-23684:-1:exon

MSBR2_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015412933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1699 family protein
translation: MRIRVISSRDEVFMLNPNERIVHLAFRPSNKDVFALVETCPKIEVIQLPKSYIATISKSIEIFLEMQRIQLMEGDVWGHRKDINEYYTIPISVTEKIREMKIEGKSNEDIEAKVSRENRLNPEMVAYIMNKEAPA
SIO_010081: MSBR2_RS00070
subclass of: SO_0000673
so part of: MSBR2_RS00070
location: complement(23277..23684)
location: region:23277-23684:-1
so has part: feature:23277-23684:-1:exon

WP_048116276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23277-23684:-1:exon

MSBR2_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00075
old locus tag: MSBR2_0013
so part of: sequence
location: complement(24291..25841)
location: region:24291-25841:-1
so has part: feature:24291-25841:-1:exon
subclass of: SO_0000010

24798929
type: Gene
SIO_000068: ncbigene

position:24291:-1
position: 24291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25841:-1
position: 25841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24291-25841:-1:exon

MSBR2_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00075
old locus tag: MSBR2_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011301994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis protein
translation: MLNSTDPQDVFSKQVPKNLTANIVYFIISLASGLFLVPYFINSLGVASYAMIPLATSFTSYVNLITVSLNTSVSRPITIELQKEEFKKANVTFNTALFGTLGIILLILPIILLLSYYSPSFFEVPSNQENATRLLFLGVIIAFLLRAWSSNFGVSIFAYNRLDILNIINAINILVQVSLIILFFKLDSPNLAYIGLAYLIAAIVAFALTVFFSRRTNPHLKINIKDFHRSKANEIMEMGGWVIITQIGSLLFLQIDLIVVNKLFGTLAGGEYSIAFMWSSVLRTIASVLISILTPVILTYYIRGKIEELINLAKSAIKLTGLALALPIGFICGFAPQLLSLWVGPEFVKISPLILIMLSHLVINLPVMLLFDINIAYNKVRTPGIVTFWMGVGNFLLELTLPFITGWGYYGVAVAGAIVLTLNNAIFIPWYTTKILGIPRTTFVSSIFPGVLAVFIITGSCRLINFLVPVSGLGALVISGIIVTIVYMVSIWVFTKENIERQIIMSMLPSTIRYRL
SIO_010081: MSBR2_RS00075
subclass of: SO_0000673
so part of: MSBR2_RS00075
location: complement(24291..25841)
location: region:24291-25841:-1
so has part: feature:24291-25841:-1:exon

WP_048116278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24291-25841:-1:exon

MSBR2_RS20335
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS20335
so part of: sequence
location: 26348..26539
location: region:26348-26539:1
so has part: feature:26348-26539:1:exon
subclass of: SO_0000010

60339865
type: Gene
SIO_000068: ncbigene

position:26348:1
position: 26348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26539:1
position: 26539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26348-26539:1:exon

MSBR2_RS20335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS20335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIPIKLRVKGMIAILKERLMFRFHFLVATRISIKDRSIKSPIIIALQYWGIPMVVVADLTPE
SIO_010081: MSBR2_RS20335
subclass of: SO_0000673
so part of: MSBR2_RS20335
location: 26348..26539
location: region:26348-26539:1
so has part: feature:26348-26539:1:exon

WP_196297265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26348-26539:1:exon

MSBR2_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00085
old locus tag: MSBR2_0015
so part of: sequence
location: 27993..28814
location: region:27993-28814:1
so has part: feature:27993-28814:1:exon
subclass of: SO_0000010

24798931
type: Gene
SIO_000068: ncbigene

position:27993:1
position: 27993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28814:1
position: 28814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27993-28814:1:exon

MSBR2_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00085
old locus tag: MSBR2_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011302005.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MSSGYIYMDCFKQEKDISLGSIAKKCIGFIVKSLHFFIFGFEFKAIFYHISPLYRCLNKISVYFYLEVIRMENKYKASGYTKDSGALHLYVKDIRILTPKEYETLMVVIPKDFHKTIFDVLLITGMRYIEMLRLYKHREWYNEKRNLIHLPEEAQKKAKRRQLERTIYPLPGMFSYILKDFWEGKKPPLEATWNKNLQRWAIAAGINPYGLSVKTTRKTLESWMIAAGILESAVCLRQGHDSLTSMRHYQGLVFSDDELREIKKKLTSWGIGK
SIO_010081: MSBR2_RS00085
subclass of: SO_0000673
so part of: MSBR2_RS00085
location: 27993..28814
location: region:27993-28814:1
so has part: feature:27993-28814:1:exon

WP_230628769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27993-28814:1:exon

MSBR2_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00090
old locus tag: MSBR2_0016
so part of: sequence
location: 29373..30134
location: region:29373-30134:1
so has part: feature:29373-30134:1:exon
subclass of: SO_0000010

24798932
type: Gene
SIO_000068: ncbigene

position:29373:1
position: 29373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30134:1
position: 30134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29373-30134:1:exon

MSBR2_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00090
old locus tag: MSBR2_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016358333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MSGESSNGSRHECVTLCDYPQKTRTALKQILVILPAYNEEISIGSMVHLTRSYADKVIVVDDGSLDRTADVARKAGAEVIVHEVNLGKGRALKTGFETALTLGADIIVTMDSDGQHNPAEIPKLVAPIVEGEAEVVNGSRYLYGLEKNTPAYRRIGQTILDGVTNLNSGLQITDSQSGFRAFAASTIGKFRFNAQGMAIESEMLTDAGNAGFRIKEVGIGVRYDVDCSTKRPVSHGLEVLLAVLKDMVLKKHV
SIO_010081: MSBR2_RS00090
subclass of: SO_0000673
so part of: MSBR2_RS00090
location: 29373..30134
location: region:29373-30134:1
so has part: feature:29373-30134:1:exon

WP_080941416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29373-30134:1:exon

MSBR2_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00095
old locus tag: MSBR2_0017
so part of: sequence
location: 30174..31286
location: region:30174-31286:1
so has part: feature:30174-31286:1:exon
subclass of: SO_0000010

24798933
type: Gene
SIO_000068: ncbigene

position:30174:1
position: 30174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31286:1
position: 31286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30174-31286:1:exon

MSBR2_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00095
old locus tag: MSBR2_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011302007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF354 domain-containing protein
translation: MRIAFFINTPAHVHLYKNVIKSLELSGHQAIILARNYGDTVNLLDEIGFEYFVYANVPDSKYGKILSLPFNVLTAYNFLRKEKPDLLVGMGVYSAYTSQLLRKKCIIFNDSEPTPFQFMLFKPFVDVVLTPSSFTIDLGPKHIKFNSFKEIAYLHKNYFVPDVKIYDFLGIGQDEDYVLLRFNAFDAVHDFGINGFSIDQKRLLVNELSKHARVFISSEIKLPDDFNKYLLKIPKSRIHDILYYAKLVVADTQTITTESAVLGTPVVRFNSFVGKKDMGNFIELENKYHLIFSFSEPEKAIANAVELIQEPDLKNKWKEKRDQLLADKIDATKFLASFIGNYPKSQNKIRDGKKYSKREGSAIILQGDLL
SIO_010081: MSBR2_RS00095
subclass of: SO_0000673
so part of: MSBR2_RS00095
location: 30174..31286
location: region:30174-31286:1
so has part: feature:30174-31286:1:exon

WP_048116282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30174-31286:1:exon

MSBR2_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
gene: wecB
locus tag: MSBR2_RS00100
old locus tag: MSBR2_0018
so part of: sequence
location: 31283..32398
location: region:31283-32398:1
so has part: feature:31283-32398:1:exon
subclass of: SO_0000010

24798934
type: Gene
SIO_000068: ncbigene

position:31283:1
position: 31283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32398:1
position: 32398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31283-32398:1:exon

MSBR2_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
gene: wecB
locus tag: MSBR2_RS00100
old locus tag: MSBR2_0018
EC number: 5.1.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011500039.1
GO function: GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
translation: MKIASVVGVRPQFVKASVVSRELRKTNEECLIHTGQHYDYEMNKVFFEELGIPEPNYYLGVGSGSHGQQTGEMLRKLEEVLLIEKPDLVLTYGDTNSTLAGALAASKLGIKNAHVESGLRSFDRSMPEEINRILTDHCSNILFCPTQNAVDNLREEGITENVYLTGDVMVDSLLLNKEIAEAKSSILTDLNLKNRDYLVATIHRASNTDNIENLQNIIEAFQGLDENIIFPVHPRTEKLLRSYGLYESLSSSVTLTKPLGFLDFIKLMNHAKMILTDSGGVQKEAYILKVPCVTLRENTEWIETIRDGWNVLVGSNKNKIIEAVNEFMPLAKEHRNRFGDGSASNRIAATINGLFGNKSASNRIAVTINAL
SIO_010081: MSBR2_RS00100
subclass of: SO_0000673
so part of: MSBR2_RS00100
location: 31283..32398
location: region:31283-32398:1
so has part: feature:31283-32398:1:exon

WP_048116284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31283-32398:1:exon

MSBR2_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00105
old locus tag: MSBR2_0019
so part of: sequence
location: 32420..33622
location: region:32420-33622:1
so has part: feature:32420-33622:1:exon
subclass of: SO_0000010

24798935
type: Gene
SIO_000068: ncbigene

position:32420:1
position: 32420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33622:1
position: 33622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32420-33622:1:exon

MSBR2_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00105
old locus tag: MSBR2_0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011301995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFDVIVDNSMKSLYDWVKSEEYYGWDPYDALNSKIVNKFCSSSQLLEILVTQLNKYSILNIRPIIGVEKGLDVKGMSLFAQSFSKIYSLTNDQRYKEDLFECSNFLKNKSLKQKYGFDCWAGHYFYHRGFDGDILTPEIPDIITTSNVIKAMVDSYLIFKDEALKDIGKSACDFLIKDLLRKTDDGLYYLQYDTLSEDKIVTDASAKGLTAICKLMPLFDDAEMRTVACKLSEFLIRTQDSDGCWIYTKYKSGKIRRQTDFHQGFIIDSLVEYLSFAEPKEQDRLIDSIKRGVNFYRKKQFLDDGRCYYRYPQMYPTDIHNQAQGIITFSKLSMFDPEFLEFARKILEWTIFNMQDNSGYFFYQKNRVLTNKIPYMRWGAAWMMLSMATYLEKVGVAKS
SIO_010081: MSBR2_RS00105
subclass of: SO_0000673
so part of: MSBR2_RS00105
location: 32420..33622
location: region:32420-33622:1
so has part: feature:32420-33622:1:exon

WP_048116286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32420-33622:1:exon

MSBR2_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS00110
old locus tag: MSBR2_0020
so part of: sequence
location: 33565..34692
location: region:33565-34692:1
so has part: feature:33565-34692:1:exon
subclass of: SO_0000010

24798936
type: Gene
SIO_000068: ncbigene

position:33565:1
position: 33565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34692:1
position: 34692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33565-34692:1:exon

MSBR2_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS00110
old locus tag: MSBR2_0020
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011301996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MDDAVHGNVFRKSGGGKIVRVLMCGSVASSGGVSTHTRKLIENLSVEDSEILLYNYYTNEDNAKTTNIEKVYRRTFGLFFEILSNKKKYEIIHDQTSGGIFSFISSITASIASKIAGRKLIVTFHYSNTEEFVKKYKPFFNFVLKNVDTMILVSNKQKDIISKTFPQYSNKLVVIPNGYDSAFFFPRDTDECRAMLGVPVNKKVIFNISNLIDIKGHKYLIEAIGNIAKTRSDIYCIIAGKGYLLETLEQQIKDFKLEDYIKLVGWIPDDEIPIYINTSDFFVLPSLGEGNPIVMFEAIGCGKPFIGTKVGGVPEIIASEDYGLLCEPASSEALEKTIMLALNKNWDTFKIKEYAESFTWKNIAKTTKSIYGQTL
SIO_010081: MSBR2_RS00110
subclass of: SO_0000673
so part of: MSBR2_RS00110
location: 33565..34692
location: region:33565-34692:1
so has part: feature:33565-34692:1:exon

WP_230628771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33565-34692:1:exon

MSBR2_RS18365
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS18365
old locus tag: MSBR2_0021
so part of: sequence
location: complement(35241..38936)
location: region:35241-38936:-1
so has part: feature:35241-38936:-1:exon
subclass of: SO_0000010

25418906
type: Gene
SIO_000068: ncbigene

position:35241:-1
position: 35241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38936:-1
position: 38936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35241-38936:-1:exon

MSBR2_RS18365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS18365
old locus tag: MSBR2_0021
inference: COORDINATES: protein motif:HMM:NF040138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PKD domain-containing protein
translation: MNKLYRVLVFLVFFGLGIPCASAANITSFIPQTVQMDMGSSQEVQIVMDEVPAGLAGFNITISVSDPEIAEITEVSFPDWNLIPENSTVPSSSVWIRGIDLGETVNSNDVNVSLGNITITGKQAGTAGLNIQPELITADGGSTINSVVNPGEINVLDIESDTEFPIINSVDLDDYTPNTGNSILVTVDTTDNVGVSEVKANDVSLVHQSGNIWSGSIVAVEGTHSVNVSSEDAAGNVAWNNDTSYTATTPDPTSSEGELQLWTFDAGKVSDIPDNIYTANPINSTSNVSLAYNSTLGSIDSSCWNNDSGETYITGAYPAVNENLTFTIGVDSSSEWSYGYIHTSVANLGIRHALDGSYWVKSYWTSDNGSQLNSSFQIPASSVVKNKVTVSIHSNDSTRTNVVTAGSGMSVTTPYTTEKTRKLPYTNVIQPLIYLDLWANNEGDWVNMHLYNITQSIPRDMITPYARNDIMAFGFDYPNVANNQNGTDLLISRNQTASVYVSEANLLNSDDIDYDNSLFANGFKGCIHFHPGLASESLEDAKNTIDTQTTLMENTLGLTPASWSSTENNDNITHAIYVYNKYGSLYRNGPMGMDFIPNVNTLSNETWDWWSVSSAHGAISPCFTHETDNYPAVQYSIDPDLFKTFVLNLNSNGIDLVDFSKWYYSSMAQTATTDVLQSDENNLKFQLNTSGGYSVNINVRTTISPSSLDCDGVSVPFDQTSDGIQFMSVGNGTYTLKNSMPVRPVANFSTNVSEGYAPLIVQFTDLSTNAESVSWDFENDGVTDTNKSNPVHEFTTAGTYTVNLTASNANGTNSKLGTITVTENPESVLPVANFSTNVSEGYAPLIVQFTDLSTNAESVSWDFENDGVTDTNKSNPVHEFTTAGTYTVNLTASNANGTNSKLGTITVTEKPESVLPVANFTASLTVQFTDISTNNPTQWEWNFGDGTSSTEQNPVHVYGSEGTYTVTLVATNDAGSSYVRSMVITVTRLIPVASFTADPTEGSAPLTVQFTDTSTNSPTQWNWDFGDGNTSTEQNPVHVFSDEGMYSVTLVAINGDGSSDPRSMDIKVNRIPTPPVVNFTAQQTGPLTVQFNDTSSNSPTQWNWDFGDGSTSTDANPAHTYAVAGTYTVNLTVSNADGSDTIGKAITVTGTSASPTARFTLAPQIGRSPLTVKFTDKSVNAASIKWDFGDGTTSTESNPSHTYTTGFYIVRLTATNGDKSSTTANIVIVGR
SIO_010081: MSBR2_RS18365
subclass of: SO_0000673
so part of: MSBR2_RS18365
location: complement(35241..38936)
location: region:35241-38936:-1
so has part: feature:35241-38936:-1:exon

WP_052725694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35241-38936:-1:exon

MSBR2_RS20680
type: Gene
subclass of: SO_0000704
RO_0002162: 1434106
locus tag: MSBR2_RS20680
old locus tag: MSBR2_0022
so part of: sequence
location: complement(38941..39585)
location: region:38941-39585:-1
so has part: feature:38941-39585:-1:exon
subclass of: SO_0000010

24798938
type: Gene
SIO_000068: ncbigene

position:38941:-1
position: 38941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39585:-1
position: 39585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38941-39585:-1:exon

MSBR2_RS20680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1434106
locus tag: MSBR2_RS20680
old locus tag: MSBR2_0022
inference: COORDINATES: protein motif:HMM:NF012999.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PKD domain-containing protein
translation: MESVSWDFENDGVTDTNESNPVREFTTPGNYTVNLTASNSNGTNSKLATITVTENPEPVLPVANFSTNVSEGYAPLVVQFNDSSKNATGWHWDFGDGANSTEKNPMHIYTVAGTYTVNLTASNEYGMNSTSVIINVFENMPFPGYTNPPKDIDHDGFYEDINGDGNVDFDDVVAYYTNMYWMKTNVPVALFDYNNNNIIDFDDVVILYKISKEG
SIO_010081: MSBR2_RS20680
subclass of: SO_0000673
so part of: MSBR2_RS20680
location: complement(38941..39585)
location: region:38941-39585:-1
so has part: feature:38941-39585:-1:exon

WP_048116289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38941-39585:-1:exon