Companilactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence.
type: Entry
definition: Companilactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence.
sequence version: NZ_CP018868.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP018868.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06162175
keyword: RefSeq
source: Companilactobacillus alimentarius DSM 20249
organism: Companilactobacillus alimentarius DSM 20249
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Companilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP018868.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT analysis 2.3 v. HGAP protocol 2\nGenome Coverage :: 261.51\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 07:20:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,344\nCDSs (total) :: 2,274\nGenes (coding) :: 2,249\nCDSs (with protein) :: 2,249\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 25\nCDSs (without protein) :: 25\nPseudo Genes (ambiguous residues) :: 0 of 25\nPseudo Genes (frameshifted) :: 20 of 25\nPseudo Genes (incomplete) :: 7 of 25\nPseudo Genes (internal stop) :: 2 of 25\nPseudo Genes (multiple problems) :: 4 of 25\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 68058
topology: circular
so has quality: SO_0000988
location: 1..68058
location: region:1-68058:1
RO_0002162: 1423720

NZ_CP018868
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06162175
type: BioSample
SIO_000068: biosample

1
title: The whole genome sequencing and assembly of Lactobacillus alimentarius DSM 20249T strain
author: Lee, Y.-J.
author: Yi, H.
author: Bahn, Y.-S.
author: Kim, J.F.
author: Lee, D.-W.
journal: Unpublished

2
title: Direct Submission
author: Lee, Y.-J.
author: Yi, H.
author: Bahn, Y.-S.
author: Kim, J.F.
author: Lee, D.-W.
journal: Submitted (20-DEC-2016) Kyungpook National University, School of Applied Biosciences, 80 Daehak-Ro, Bukgu, Daegu 41566, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68058:1
position: 68058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-68058:1:source
so part of: sequence
organism: Companilactobacillus alimentarius DSM 20249
mol type: genomic DNA
strain: DSM 20249
isolation source: marinated fish product
type material: type strain of Lactobacillus alimentarius
plasmid: pLDW-11
country: Germany
collection date: 1970

1423720
type: Taxonomy
SIO_000068: taxonomy

LA20249_RS11255
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11255
so part of: sequence
location: complement(join(68035..68058,1..111))
location: region:1-68058:-1
so has part: feature:1-111:-1:exon
so has part: feature:68035-68058:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68058:-1
position: 68058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-111:-1:exon

position:111:-1
position: 111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68035-68058:-1:exon

position:68035:-1
position: 68035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LA20249_RS11255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CagC family type IV secretion system protein
translation: MKFSKVKALATTGATAIYLGLMNAQVVFAADGGEVKSRMKMYSP
SIO_010081: LA20249_RS11255
subclass of: SO_0000673
so part of: LA20249_RS11255
location: complement(join(68035..68058,1..111))
location: region:1-68058:-1
so has part: feature:1-111:-1:exon
so has part: feature:68035-68058:-1:exon

WP_236900126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68035-68058:-1:exon

LA20249_RS11260
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11260
old locus tag: LA20249_11245
so part of: sequence
location: complement(113..727)
location: region:113-727:-1
so has part: feature:113-727:-1:exon
subclass of: SO_0000010

position:113:-1
position: 113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727:-1
position: 727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113-727:-1:exon

LA20249_RS11260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11260
old locus tag: LA20249_11245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVESWQGINGKLIHNGQKAIVVKDEQELADQDKLQDRLKQEGKPIDEVRKALIKNTVKRQIKTDPLKISSWFNRHQDSKNAKKTEKLVSDKPTHQYKQIKNEMTFFGESFLEGFLGFYGLEVDNALGRYEHNLHVLETQELGQSEKEYYLATSENGRVKLATDPLPSQQIAEEQLNKFYQREPEETQAEQIQLRTSEDDRKEE
SIO_010081: LA20249_RS11260
subclass of: SO_0000673
so part of: LA20249_RS11260
location: complement(113..727)
location: region:113-727:-1
so has part: feature:113-727:-1:exon

WP_020967646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113-727:-1:exon

LA20249_RS11265
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11265
old locus tag: LA20249_11250
so part of: sequence
location: complement(766..1074)
location: region:766-1074:-1
so has part: feature:766-1074:-1:exon
subclass of: SO_0000010

position:766:-1
position: 766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074:-1
position: 1074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766-1074:-1:exon

LA20249_RS11265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11265
old locus tag: LA20249_11250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKEEWYNLGQASQKLGRSRSYVSLWLRRHKGEVPKNMIMEGGKSKLISAQGIEWIRDHIKKEGVLVSNSSANGDQHLESQLLGVTLLTIHFTGRVRGKLVV
SIO_010081: LA20249_RS11265
subclass of: SO_0000673
so part of: LA20249_RS11265
location: complement(766..1074)
location: region:766-1074:-1
so has part: feature:766-1074:-1:exon

WP_082272744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:766-1074:-1:exon

LA20249_RS11270
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
gene: mobQ
locus tag: LA20249_RS11270
old locus tag: LA20249_11255
pseudo: true
so part of: sequence
location: complement(1158..3217)
location: region:1158-3217:-1
so has part: feature:1158-3217:-1:exon
subclass of: SO_0000010

position:1158:-1
position: 1158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217:-1
position: 3217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158-3217:-1:exon

LA20249_RS11270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
gene: mobQ
locus tag: LA20249_RS11270
old locus tag: LA20249_11255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660197.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobQ family relaxase
SIO_010081: LA20249_RS11270
subclass of: SO_0000673
so part of: LA20249_RS11270
location: complement(1158..3217)
location: region:1158-3217:-1
so has part: feature:1158-3217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158-3217:-1:exon

LA20249_RS11275
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11275
old locus tag: LA20249_11260
pseudo: true
so part of: sequence
location: 3483..3691
location: region:3483-3691:1
so has part: feature:3483-3691:1:exon
subclass of: SO_0000010

position:3483:1
position: 3483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3691:1
position: 3691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483-3691:1:exon

LA20249_RS11275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11275
old locus tag: LA20249_11260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013729135.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LA20249_RS11275
subclass of: SO_0000673
so part of: LA20249_RS11275
location: 3483..3691
location: region:3483-3691:1
so has part: feature:3483-3691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483-3691:1:exon

LA20249_RS11280
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11280
old locus tag: LA20249_11265
so part of: sequence
location: 3714..3992
location: region:3714-3992:1
so has part: feature:3714-3992:1:exon
subclass of: SO_0000010

position:3714:1
position: 3714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992:1
position: 3992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3714-3992:1:exon

LA20249_RS11280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11280
old locus tag: LA20249_11265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQADNLSVEQTEELLKIFADYVNAHKPDKLKNDQPNN
SIO_010081: LA20249_RS11280
subclass of: SO_0000673
so part of: LA20249_RS11280
location: 3714..3992
location: region:3714-3992:1
so has part: feature:3714-3992:1:exon

WP_041095822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3714-3992:1:exon

LA20249_RS11285
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11285
old locus tag: LA20249_11270
so part of: sequence
location: complement(3982..4662)
location: region:3982-4662:-1
so has part: feature:3982-4662:-1:exon
subclass of: SO_0000010

position:3982:-1
position: 3982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4662:-1
position: 4662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3982-4662:-1:exon

LA20249_RS11285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11285
old locus tag: LA20249_11270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124583.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MIDKPQYIIVAGINGAGKSTLYDTFPILFDKTKRINADELLRQMGGDWHKDSDNLKAMKEEIKQLHYALDHQQSIHVETTLAGRGKAQLNLIDKAHKNGFEVTLLYVALRDENLAIQRVNERVQKGGHGVPVATIKKRYQQSKHNLPLVAFKSDKVMIYDNSEKFTSVYAREKGQVFKNDLRHFPWINQNITYPEKVQKQLQNFADQNPEVKPKNDPENKNDRPSY
SIO_010081: LA20249_RS11285
subclass of: SO_0000673
so part of: LA20249_RS11285
location: complement(3982..4662)
location: region:3982-4662:-1
so has part: feature:3982-4662:-1:exon

WP_010012556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3982-4662:-1:exon

LA20249_RS11290
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11290
old locus tag: LA20249_11275
so part of: sequence
location: complement(4659..4844)
location: region:4659-4844:-1
so has part: feature:4659-4844:-1:exon
subclass of: SO_0000010

position:4659:-1
position: 4659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4844:-1
position: 4844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4659-4844:-1:exon

LA20249_RS11290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11290
old locus tag: LA20249_11275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010620892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
SIO_010081: LA20249_RS11290
subclass of: SO_0000673
so part of: LA20249_RS11290
location: complement(4659..4844)
location: region:4659-4844:-1
so has part: feature:4659-4844:-1:exon

WP_010620892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4659-4844:-1:exon

LA20249_RS11295
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11295
old locus tag: LA20249_11280
so part of: sequence
location: complement(4891..5172)
location: region:4891-5172:-1
so has part: feature:4891-5172:-1:exon
subclass of: SO_0000010

position:4891:-1
position: 4891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5172:-1
position: 5172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4891-5172:-1:exon

LA20249_RS11295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11295
old locus tag: LA20249_11280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVQIDKELADNTEAVLSQLGLNPTTAINMFYKRIVADAALPFKPALSEAERANLSLLKATKETPVTEFKDAKEVADWLNDPDED
SIO_010081: LA20249_RS11295
subclass of: SO_0000673
so part of: LA20249_RS11295
location: complement(4891..5172)
location: region:4891-5172:-1
so has part: feature:4891-5172:-1:exon

WP_010014831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4891-5172:-1:exon

LA20249_RS11300
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11300
old locus tag: LA20249_11285
pseudo: true
so part of: sequence
location: complement(5399..6477)
location: region:5399-6477:-1
so has part: feature:5399-6477:-1:exon
subclass of: SO_0000010

position:5399:-1
position: 5399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6477:-1
position: 6477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5399-6477:-1:exon

LA20249_RS11300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11300
old locus tag: LA20249_11285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010014830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiator protein A
SIO_010081: LA20249_RS11300
subclass of: SO_0000673
so part of: LA20249_RS11300
location: complement(5399..6477)
location: region:5399-6477:-1
so has part: feature:5399-6477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5399-6477:-1:exon

LA20249_RS11305
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11305
old locus tag: LA20249_11290
so part of: sequence
location: complement(7084..7332)
location: region:7084-7332:-1
so has part: feature:7084-7332:-1:exon
subclass of: SO_0000010

position:7084:-1
position: 7084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7332:-1
position: 7332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7084-7332:-1:exon

LA20249_RS11305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11305
old locus tag: LA20249_11290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003712273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MSLDSFNHKKDEEMRESYETTLKDNKKDAVAFLKNISRKEVERKRSVTFSITESQLKKMDTAARKNGFKNRSEFLASIIDAI
SIO_010081: LA20249_RS11305
subclass of: SO_0000673
so part of: LA20249_RS11305
location: complement(7084..7332)
location: region:7084-7332:-1
so has part: feature:7084-7332:-1:exon

WP_002825834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7084-7332:-1:exon

LA20249_RS11310
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11310
old locus tag: LA20249_11295
so part of: sequence
location: complement(7346..8152)
location: region:7346-8152:-1
so has part: feature:7346-8152:-1:exon
subclass of: SO_0000010

position:7346:-1
position: 7346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8152:-1
position: 8152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7346-8152:-1:exon

LA20249_RS11310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11310
old locus tag: LA20249_11295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKIITFTAIKGGVGKTTLTLNYGDWLAKHGKKVLLIDLDHQCNLTTVFEKTRRNNTIAEAFKENDNAQKVKIDSVGPNLDLIAGFIDLDVLGSYLENNSNKEMMLFMWFKNNSDSLSLTDYDYILIDTHPDFSTITKNAIAISNYLLSPITPSEHGYNAKFDLETRLEKFRKSLFDYRTGETYVDAKLFFIGNMIRHNTSMSRDLLKHIEGDETVATIIPERELFNKATARHASIFELANHDESILKQNQKFIEHADHLFQELANKTK
SIO_010081: LA20249_RS11310
subclass of: SO_0000673
so part of: LA20249_RS11310
location: complement(7346..8152)
location: region:7346-8152:-1
so has part: feature:7346-8152:-1:exon

WP_010010267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7346-8152:-1:exon

LA20249_RS11315
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11315
old locus tag: LA20249_11300
so part of: sequence
location: complement(8249..8842)
location: region:8249-8842:-1
so has part: feature:8249-8842:-1:exon
subclass of: SO_0000010

position:8249:-1
position: 8249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8842:-1
position: 8842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8249-8842:-1:exon

LA20249_RS11315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11315
old locus tag: LA20249_11300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013729126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKDVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDLTQIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGISLAKQQGKYHGRKPQYTQDDPRLQHAFKLYQAGMSDVDVARNTGIKRTTFIRYRKKYRIFKNEL
SIO_010081: LA20249_RS11315
subclass of: SO_0000673
so part of: LA20249_RS11315
location: complement(8249..8842)
location: region:8249-8842:-1
so has part: feature:8249-8842:-1:exon

WP_034528490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8249-8842:-1:exon

LA20249_RS11320
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11320
old locus tag: LA20249_11305
so part of: sequence
location: 9264..10469
location: region:9264-10469:1
so has part: feature:9264-10469:1:exon
subclass of: SO_0000010

position:9264:1
position: 9264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10469:1
position: 10469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9264-10469:1:exon

LA20249_RS11320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11320
old locus tag: LA20249_11305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825823.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSDLDQTNSYRYVIVGGGVVAGYAVKGIRQEDSEGEILIISQEADVPYERPALSKKLWLDDEFTEENIQIGAENYPNVTFKFKTTVTAINRQDKVITLDDSEQIKYEQLLLATGGEPRQIQGPSDPHVLVFRQWSDYRKLRKFSGPNKRVVIIGGGYVGTELASSLTQNETEVTMIFPEKALGEGKFPEPIRTEYEATFKRNGVTLMSGQFVQSYQRQGDHLTLLTKDGTVIAADTIIVGLGVTPRISLAEDSCLDLADGGVKVNEYLNTSDPAIWSAGDIASYPDHILGRQRIEHVDHARLSGELVGRNMAGAHMSYQHTPYFYSMIFYISWQAIGNIDPKLQLIFDRRTHGSLVYFIDTDKLVGVLVWNVKVNLDDVRALLANAPATDDLVGSIREKKA
SIO_010081: LA20249_RS11320
subclass of: SO_0000673
so part of: LA20249_RS11320
location: 9264..10469
location: region:9264-10469:1
so has part: feature:9264-10469:1:exon

WP_057738166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9264-10469:1:exon

LA20249_RS11325
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11325
old locus tag: LA20249_11310
so part of: sequence
location: complement(10754..11986)
location: region:10754-11986:-1
so has part: feature:10754-11986:-1:exon
subclass of: SO_0000010

position:10754:-1
position: 10754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11986:-1
position: 11986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10754-11986:-1:exon

LA20249_RS11325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11325
old locus tag: LA20249_11310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010499758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MKDENIIFTEDPKFMLVNGIKSLVYFAMLTKQIDRCLNCGLAGHLVKNGFNKNMIVVPSLSLRPTYISLKRQKYKCKSCNSIFVAKTSYVWEYCQIAQPVRQMILSETAFNTSLKDIGRRFNVSDKTVQRIIDEEAKMHKKSLPEHLPKHMAFDEFMSTDKMSFIWLDSDNHRTGDILPRRTSYQISKYFSRFPLKVRRQVKTISLDLNAGYINLVPKLFPKAKVVVDRFHIVQMMNRSLNSTRIQVMKRMPKRNKEYLFMKRDWKKFLESFDSIEKINPKYQYSVGYYETDLNLITKCLDLDEGFAKSYEVYQDILKAIRTGDTDTMNQILLNYHPLNTAMDQTMTSLRKYRKQVLNALKLKYSNGFLEGIIGRTKKIKSSAYGYRSWNNFTECINIQMFWLRASSSAK
SIO_010081: LA20249_RS11325
subclass of: SO_0000673
so part of: LA20249_RS11325
location: complement(10754..11986)
location: region:10754-11986:-1
so has part: feature:10754-11986:-1:exon

WP_235806745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10754-11986:-1:exon

LA20249_RS11330
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11330
old locus tag: LA20249_11315
so part of: sequence
location: 12308..13483
location: region:12308-13483:1
so has part: feature:12308-13483:1:exon
subclass of: SO_0000010

position:12308:1
position: 12308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13483:1
position: 13483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12308-13483:1:exon

LA20249_RS11330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11330
old locus tag: LA20249_11315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLNLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTKEITTAEIAELIEKMYGAHYSKATVSNMTKAVNEQVQAFQQRRLASQYVAIFLDATYLQLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSLYSTNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGFKGLQDILEASFI
SIO_010081: LA20249_RS11330
subclass of: SO_0000673
so part of: LA20249_RS11330
location: 12308..13483
location: region:12308-13483:1
so has part: feature:12308-13483:1:exon

WP_057738164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12308-13483:1:exon

LA20249_RS11335
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11335
old locus tag: LA20249_11320
pseudo: true
so part of: sequence
location: complement(<13544..15271)
location: region:13544-15271:-1
so has part: feature:13544-15271:-1:exon
subclass of: SO_0000010

position:13544:-1
position: 13544
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:15271:-1
position: 15271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13544-15271:-1:exon

LA20249_RS11335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11335
old locus tag: LA20249_11320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639662.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
SIO_010081: LA20249_RS11335
subclass of: SO_0000673
so part of: LA20249_RS11335
location: complement(<13544..15271)
location: region:13544-15271:-1
so has part: feature:13544-15271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13544-15271:-1:exon

LA20249_RS11340
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11340
old locus tag: LA20249_11330
so part of: sequence
location: 15477..16264
location: region:15477-16264:1
so has part: feature:15477-16264:1:exon
subclass of: SO_0000010

position:15477:1
position: 15477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16264:1
position: 16264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15477-16264:1:exon

LA20249_RS11340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11340
old locus tag: LA20249_11330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNTTRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: LA20249_RS11340
subclass of: SO_0000673
so part of: LA20249_RS11340
location: join(15477..15735,15735..16264)
location: region:15477-16264:1
so has part: feature:15477-15735:1:exon
so has part: feature:15735-16264:1:exon

WP_101836923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15477-15735:1:exon

position:15735:1
position: 15735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15735-16264:1:exon

LA20249_RS11345
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11345
old locus tag: LA20249_11335
so part of: sequence
location: complement(16251..16610)
location: region:16251-16610:-1
so has part: feature:16251-16610:-1:exon
subclass of: SO_0000010

position:16251:-1
position: 16251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16610:-1
position: 16610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16251-16610:-1:exon

LA20249_RS11345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11345
old locus tag: LA20249_11335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLIFSIWAIALLIIAGTLTVLASKTNSDTQSNQQLAPQTQTKLINIADKALTKREAKQTRIVYVGKVVRHHQKFYLLAGIKRQTGKRVSTKPDSICNFFINESFKLKAISKKLSKIS
SIO_010081: LA20249_RS11345
subclass of: SO_0000673
so part of: LA20249_RS11345
location: complement(16251..16610)
location: region:16251-16610:-1
so has part: feature:16251-16610:-1:exon

WP_057738140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16251-16610:-1:exon

LA20249_RS11350
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11350
old locus tag: LA20249_11340
so part of: sequence
location: 16789..18039
location: region:16789-18039:1
so has part: feature:16789-18039:1:exon
subclass of: SO_0000010

position:16789:1
position: 16789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18039:1
position: 18039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16789-18039:1:exon

LA20249_RS11350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11350
old locus tag: LA20249_11340
inference: COORDINATES: protein motif:HMM:NF033550.5
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MPQLNSILNLLNITDTNIDILNSNDKVIFRGSQKLHIKVIEGRLSYRLKKCPNCGFDCLIKNGARETNVRLGSLNGSEYHLKLWKQRYLCRSCKTTCGAHTNLVEKNQSMSRQIDQLIILLAKQSFTFKSIAMMLGISASTVARKIYGRLQLPKRARLLPKNICIDEFRSANHLFSFIACDADSHQMITLLPNRLSMKIIEHFKREYSLSERQQVESVSIDLNANYQGVIRRLFPNAKIIVDRFHIVQLVGRALDKARLSVLNSLSDKKSREYKALKSQWRMFHLFDDELDQANIRYIFGINEYMTQQNLVDIGLDADPVFKDVYQTYQNVLRSIKSKDPELLKQTLQEYKNNGSSMDTAITTFKNNYKYLVNSCELPYSNGPLEGLIGKIKKLKHNCYGFRNLHNFFVRIRLIIA
SIO_010081: LA20249_RS11350
subclass of: SO_0000673
so part of: LA20249_RS11350
location: 16789..18039
location: region:16789-18039:1
so has part: feature:16789-18039:1:exon

WP_056945266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16789-18039:1:exon

LA20249_RS11355
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11355
old locus tag: LA20249_11345
so part of: sequence
location: complement(18189..19247)
location: region:18189-19247:-1
so has part: feature:18189-19247:-1:exon
subclass of: SO_0000010

position:18189:-1
position: 18189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19247:-1
position: 19247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18189-19247:-1:exon

LA20249_RS11355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11355
old locus tag: LA20249_11345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010499751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLITLKNLLKTLTPNEDVLTLSINLNKLKYQQDERLHLKSALTEIKKYSMEHPELNYKELERQVDNLIDQNLPYQGITLFIQGNTLELFVLPRTTVDEVKLTISKSPDLLSILREQPNKMYYLLALEGTSFRLFKIVDKTVAPVKLDADAPTDLVETLGSEKRGGELNFTGQGGSTTFHGHNETSKEKQIDLERYYREINKYLVETIDLTVPIVLMGLPKNLALFKRISEKLSLSEIQISKSPTDLTNAQIEKTTSNEISEQEVETITDDVAAINNKRVLTDTAEIDQAIDTNQLNKLIVNVGNLSNSVDDHLYNDINRIISRALKINSQVVVLKQEEPQSPALLEATTY
SIO_010081: LA20249_RS11355
subclass of: SO_0000673
so part of: LA20249_RS11355
location: complement(18189..19247)
location: region:18189-19247:-1
so has part: feature:18189-19247:-1:exon

WP_057738138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18189-19247:-1:exon

LA20249_RS11360
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11360
old locus tag: LA20249_11350
so part of: sequence
location: complement(19344..19673)
location: region:19344-19673:-1
so has part: feature:19344-19673:-1:exon
subclass of: SO_0000010

position:19344:-1
position: 19344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19673:-1
position: 19673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19344-19673:-1:exon

LA20249_RS11360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11360
old locus tag: LA20249_11350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010499750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MazG-like family protein
translation: MNLKDHENWLVDFYKQRDWYKYTPPVRLNYLTEEVGELSRAIRSIEFGRDHPGERKLSTYEKFDNLNEELADVIDQVLIICSQYDIDPTSLMEYSERKLNKRFESNQGA
SIO_010081: LA20249_RS11360
subclass of: SO_0000673
so part of: LA20249_RS11360
location: complement(19344..19673)
location: region:19344-19673:-1
so has part: feature:19344-19673:-1:exon

WP_057738135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19344-19673:-1:exon

LA20249_RS11365
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11365
old locus tag: LA20249_11355
so part of: sequence
location: complement(19934..20689)
location: region:19934-20689:-1
so has part: feature:19934-20689:-1:exon
subclass of: SO_0000010

position:19934:-1
position: 19934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20689:-1
position: 20689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19934-20689:-1:exon

LA20249_RS11365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11365
old locus tag: LA20249_11355
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MCRILGVSRAQYYRYRSPKPSKRRAEDADLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLWCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTCLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMATDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAF
SIO_010081: LA20249_RS11365
subclass of: SO_0000673
so part of: LA20249_RS11365
location: complement(19934..20689)
location: region:19934-20689:-1
so has part: feature:19934-20689:-1:exon

WP_057738133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19934-20689:-1:exon

LA20249_RS11370
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11370
old locus tag: LA20249_11365
so part of: sequence
location: complement(20743..20994)
location: region:20743-20994:-1
so has part: feature:20743-20994:-1:exon
subclass of: SO_0000010

position:20743:-1
position: 20743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20994:-1
position: 20994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20743-20994:-1:exon

LA20249_RS11370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11370
old locus tag: LA20249_11365
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPTRYDKEFKQNIIKLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
SIO_010081: LA20249_RS11370
subclass of: SO_0000673
so part of: LA20249_RS11370
location: complement(20743..20994)
location: region:20743-20994:-1
so has part: feature:20743-20994:-1:exon

WP_014081540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20743-20994:-1:exon

LA20249_RS11380
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11380
old locus tag: LA20249_11370
so part of: sequence
location: complement(21204..21446)
location: region:21204-21446:-1
so has part: feature:21204-21446:-1:exon
subclass of: SO_0000010

position:21204:-1
position: 21204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21446:-1
position: 21446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21204-21446:-1:exon

LA20249_RS11380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11380
old locus tag: LA20249_11370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003554089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MGFIWAIIVGSVIGALAGAITNNGQSMGWIANIVAGLIGSAIGQALLGSWGPSLAGMALIPSIIGAVILVLIVSFVVKRS
SIO_010081: LA20249_RS11380
subclass of: SO_0000673
so part of: LA20249_RS11380
location: complement(21204..21446)
location: region:21204-21446:-1
so has part: feature:21204-21446:-1:exon

WP_057738131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21204-21446:-1:exon

LA20249_RS11385
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11385
old locus tag: LA20249_11375
pseudo: true
so part of: sequence
location: complement(21559..>22105)
location: region:21559-22105:-1
so has part: feature:21559-22105:-1:exon
subclass of: SO_0000010

position:21559:-1
position: 21559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22105:-1
position: 22105
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21559-22105:-1:exon

LA20249_RS11385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11385
old locus tag: LA20249_11375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LA20249_RS11385
subclass of: SO_0000673
so part of: LA20249_RS11385
location: complement(21559..>22105)
location: region:21559-22105:-1
so has part: feature:21559-22105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21559-22105:-1:exon

LA20249_RS11395
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11395
old locus tag: LA20249_11380
pseudo: true
so part of: sequence
location: 22217..22904
location: region:22217-22904:1
so has part: feature:22217-22904:1:exon
subclass of: SO_0000010

position:22217:1
position: 22217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22904:1
position: 22904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22217-22904:1:exon

LA20249_RS11395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11395
old locus tag: LA20249_11380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477736.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: LA20249_RS11395
subclass of: SO_0000673
so part of: LA20249_RS11395
location: 22217..22904
location: region:22217-22904:1
so has part: feature:22217-22904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22217-22904:1:exon

LA20249_RS11400
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11400
old locus tag: LA20249_11385
so part of: sequence
location: 23050..24390
location: region:23050-24390:1
so has part: feature:23050-24390:1:exon
subclass of: SO_0000010

position:23050:1
position: 23050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24390:1
position: 24390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23050-24390:1:exon

LA20249_RS11400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11400
old locus tag: LA20249_11385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011101558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid permease
translation: MENQQLARKLKRRHVQMIALGGAIGTGLFLGSGSAIKQAGPSILLAYAIGGFFCYLMMRALGELLLSDTRLHSFLEFINRYLGKRFEFAIGWTYWLCWISLAMADLTASGIYIRYWFPWIPQWVTPLIIILILLVFNMLSVSAFGELEYWFSMIKVVAIIALIVTGAILIGSSAHVGGQTVSVTNLVSHGGFFPTGVQGFLMSFSLVIFAFTGIEMVGITAGEAENPEKELPRAINSLPIRISFFYVGALFVIMAIYPWDQITTSQSPFVQVFSDVGIKAAASIINFVVLTAALSACNSAIFSTSRTLFTLAHGDNAPKWMGKVNRYNVPARSLLFSSLILLVIVALNYVIPSTVFTLISNVATTNFIIVWCALLVCHYVYKRTTDSTHNPFKLPLFPVSNIATLAFFIAVTFVLCFDQVNRWAVIGSVVWFVILLVIERSMHRTV
SIO_010081: LA20249_RS11400
subclass of: SO_0000673
so part of: LA20249_RS11400
location: 23050..24390
location: region:23050-24390:1
so has part: feature:23050-24390:1:exon

WP_057738128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23050-24390:1:exon

LA20249_RS11405
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11405
old locus tag: LA20249_11390
so part of: sequence
location: complement(24707..27421)
location: region:24707-27421:-1
so has part: feature:24707-27421:-1:exon
subclass of: SO_0000010

position:24707:-1
position: 24707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27421:-1
position: 27421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24707-27421:-1:exon

LA20249_RS11405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11405
old locus tag: LA20249_11390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MRKAINRGSEWRKWDLHLHTFNTNMNKQFGCDVNTYLKKIESSDISVFGITDYFTVDNQFEIIKEFKDKYPNSNKAFFVNVEFRLNENVSNEPAGHVNAHLIFDNNIDESQVKDFISSLNLTQTNANGTFKKISDLQNEHDYQSATIDLKNIQDNLKSQFGSDKPYLLVFAAGGHGGIRPSIQDAGGDYRSKGALRNGPLSDELDKLADFLFGDVQSTDYYLNRQKKGDTYQKNTRYDCAIDKPVIKASDAHRLEKGGETNGIGDEYSWIKSDITFEGLRQIIFEPESRVSLSLEKPESKSSYLVIDHVEFKQKSNSPTGPETTSVYFNSNLNTIIGGRSNGKSTLTNSIAKSLGNEVFTSNENKSTYNMHTFNDADFKVYWQGDSEPNNDRQVEFIPQDYMITLAENDLARNKLIRSTVETDECNYEKIINYEKNIQENNSKIRQLIEELETLNQRLTNLKLPEGDESGIKKQLESINESIKEQSDKVDFSVESQKKYQQADDNLKKLTDKKRLTELNLQDLASIKAKKIKLQSPLLGTNDSDYKKRLTDFLCTLEQEANQKWQEKLLSIETEQNNRLNSFQEAINKVLTSPDYVNGQKSLKNNQELKSLSKSQKFESEKLVEFKRFESEKENINSRKIEKQNQILHTYENFKKYQDDLKQTFKAKPAGGKIEIAIDFSNIPFEDNIHYLRGRNAENDRFISEFNECRDTLIKTIFQERHLSFNTGGDADTLVKDVLSKKWTNLNYILKYDNDDFSQMSQGKKAFVILTLILEFSQDKKPVIIDQPEDSLDNRSIYQDLTRYLKSKKKERQIILVTHNPNVVVGSDAENVIVANQNSSKTPNKNNVQFNYINGPLENTFSKPNSKTLLESKGIREHVIEILEGGKEAFKERENKYTSEFSSSI
SIO_010081: LA20249_RS11405
subclass of: SO_0000673
so part of: LA20249_RS11405
location: complement(24707..27421)
location: region:24707-27421:-1
so has part: feature:24707-27421:-1:exon

WP_057738125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24707-27421:-1:exon

LA20249_RS11410
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11410
old locus tag: LA20249_11395
so part of: sequence
location: 27849..31016
location: region:27849-31016:1
so has part: feature:27849-31016:1:exon
subclass of: SO_0000010

position:27849:1
position: 27849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31016:1
position: 31016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27849-31016:1:exon

LA20249_RS11410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11410
old locus tag: LA20249_11395
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639662.1
GO component: GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO function: GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HsdR family type I site-specific deoxyribonuclease
translation: MLELSFEKEVVKTLTTGSNQWVERKDLYGATPDQLWANFRDKLNNNNYAKLQGHPLTDTEFNQVKRAIEVRTPYEAAKLLAAENGIGKVEVERDDAKLGTVTLELFWKADVAGGKSSYEVVRQAVRPRLAGTQDVDPDRRFDVTLLINGLPLIQLELKKATVELNQAFNQIEKYAQEGKYTGIYSLLQMFVIMTPDSTAYFANAEPDHFNKAFLFNWRTRDNHLVENGLAFTRQVLNIPMAHKMVSEYTVIDQERQSLILLRPYQIYAIEAVMHRIHDHQDGFVWHTTGSGKTLTSYKTAKLAAQDPGVDKVIFLVDRRDLDEQTTSNFSAYAANDDIAINEAQNTGDLMRKLQQNDGKVLVTSIQKLHRAVKKTQAQLATGKQSRFSKTLKQRVIFFVDEAHRSQFGKMQKEIRAAFINSNWYGYTGTPIFNENKKQLKGDLAVTTEELFGKVCHVYNLRDALEDQAVLPFNVEHVTTIGKDALITRAREKETQRVKARRDKQGRLLSTADEAKIQAKIQAMSVKDLEETYLTPADFETDEHINQVVQYILQKGPRKTSLGHGNYNAILTTSSIEMAQRYYQAFKAAKKTAHNQLDPDWPRIAITYSLSENEDQSAHKHDQMATILKDYNQQYHTNFDLADLNLYNEDVAKRAARREAVFAHLKPDQEINLVIVVRRLLTGFDAPRLNTLFVDRTLAYQELIQAYSRTNRLQNRELKQEGQIVTFRVPAIMEANEREAYKLYSGEGSFNVIIRPTYQQAVLKFQKAVVDLKAIAPTPTAADDLKGTTAKVQFVKAFRQVNQQLNSLSMYNDFTWENSEKAFGIAQPEVESYTGKYLRIKAAVTNQEPEKVPEELAALDFSLAVGSVVLVDYDYLTQLIQDWIDEQQQYTTPDQAQAHMTDYLQNSAKVQASLNKLAETQPQQAQLIREAMPYIEQQMQQSQQQSTPNQAPVALNARELVADYAQKQLVKKTTTFAHTWGLDQAALLRVAREHTVGTDEWHHEQELTQSANLAAALQAQTATGPKIPAVLPLYRIKSQAAWRQFIEHDLAIYLQK
SIO_010081: LA20249_RS11410
subclass of: SO_0000673
so part of: LA20249_RS11410
location: 27849..31016
location: region:27849-31016:1
so has part: feature:27849-31016:1:exon

WP_101836926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27849-31016:1:exon

LA20249_RS11415
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11415
old locus tag: LA20249_11400
so part of: sequence
location: 31030..32652
location: region:31030-32652:1
so has part: feature:31030-32652:1:exon
subclass of: SO_0000010

position:31030:1
position: 31030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32652:1
position: 32652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31030-32652:1:exon

LA20249_RS11415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11415
old locus tag: LA20249_11400
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603853.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MSEKTTQASQLESALWNAADVLRGKMDASEYKNYLLGLIFYRFLSEKTLTTFSDWAGENENVTQKYAQYMDPQFELEGVSVQPSLVEYLQNTLGYLIQPQALYTTLIGKIQAHTFALDDLSQALHDLEQSTQNLSSAQDFSGLFADVDLSSNKLGSSLQQRNQTISDTMLALNAIDLVHHQGDVLGDAYEYLIAQFASDSGKKAGEFYTPRQVSDIIAQIVTYQRNAGDNQVRTIYDPAVGSGSLLLNVGQHVQNSSLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLRNGDTLSKDWPVDEPYLFDAVVMNPPYSAHWDNSDKRLSDPRFRDYGVLPPKSKADFAFLLHGFYHLQEHGTMGIVLPHGVLFRGAKEGKIRQKLLLDNRIDAIIGLPANIFHSTGIPTLIMILKKHKTTDDVLFIDASREFEKDKNQNKLTAANIQKIVTTYQNRQDVDKYAHVASPAEIKDNDYNLNIPRYVDTFEPEPEIDLNQVKADLKQLDEEISQNEQAFNELASQLVATQVNDQSKPEAHNEV
SIO_010081: LA20249_RS11415
subclass of: SO_0000673
so part of: LA20249_RS11415
location: 31030..32652
location: region:31030-32652:1
so has part: feature:31030-32652:1:exon

WP_057738192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31030-32652:1:exon

LA20249_RS11420
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11420
old locus tag: LA20249_11405
so part of: sequence
location: 32642..33874
location: region:32642-33874:1
so has part: feature:32642-33874:1:exon
subclass of: SO_0000010

position:32642:1
position: 32642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33874:1
position: 33874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32642-33874:1:exon

LA20249_RS11420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11420
old locus tag: LA20249_11405
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693055.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MKYNQAKYPQLRFIGFIDPWEQRKLGKMGYTFTGLSGKTKEDFGHGNAKFVTYMNVFSSPVSNSEMVENVEVDSKQHQVEYGDVFFTTSSETPQEVGMSSVWLETAENIYLNSFCFGYHPMVEFDPYYLAFMLRSPVIRKKFMLLAQGISRYNISKNKVMEMLVPVPEIVEQQKIGSFFKQLDDTITLHQRKLAKLKELKQGYLQKLFPENGSKFPQLRFSGFADAWEERKLSEIGKIVTGNTPSTSNKGYYNGDFLFVSPADIQENRYVNKTTTTLTELGFKTGRLVPKGATLFVSIGSTIGKIGQSICDVITNQQINSVISFSDYDDDFIYTSILNSSTKIKQLAATQAVPIINKNEFGKSIIKIPSLEEQQKIGAFFKQLDDTIALHQRKLEKLQELKKGYLQKMFC
SIO_010081: LA20249_RS11420
subclass of: SO_0000673
so part of: LA20249_RS11420
location: 32642..33874
location: region:32642-33874:1
so has part: feature:32642-33874:1:exon

WP_057738191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32642-33874:1:exon

LA20249_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11750
old locus tag: LA20249_11410
so part of: sequence
location: 34088..34150
location: region:34088-34150:1
so has part: feature:34088-34150:1:exon
subclass of: SO_0000010

position:34088:1
position: 34088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34150:1
position: 34150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34088-34150:1:exon

LA20249_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11750
old locus tag: LA20249_11410
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MLLFAMFILALLTYIDKRNK
SIO_010081: LA20249_RS11750
subclass of: SO_0000673
so part of: LA20249_RS11750
location: 34088..34150
location: region:34088-34150:1
so has part: feature:34088-34150:1:exon

WP_230083882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34088-34150:1:exon

LA20249_RS11435
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11435
old locus tag: LA20249_11415
so part of: sequence
location: complement(34306..35430)
location: region:34306-35430:-1
so has part: feature:34306-35430:-1:exon
subclass of: SO_0000010

position:34306:-1
position: 34306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35430:-1
position: 35430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34306-35430:-1:exon

LA20249_RS11435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11435
old locus tag: LA20249_11415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002346505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNKADVKAWKAQLVAQAEQQILKLTDSDQFKQYLNTLAKFHRYSARNIDLIYAQNPQATQVAGFKQWQKAFNRTVNRGAKAIRIAAPIIKKLTPAEQKHLDTTDERAIVGYRYLPVFDVAQTSGEPVLSAKDFVKENLADHQNVTSLYNAFKDYLNQQTDLKVSEVSLATLNGAKGYFQPNTNEIVIGGDEPDNALKLKTLYHEYAHSQLHGLKSAFKDRPRAYQETQAEAVAYVAMQNIGVDTSNYSLGYVATWAKDKAVIHSALSEIQQVSNKVIELSDGLTKQLGLQEAQKEPEHDLKKLSAHDLNKSYQGLQQQIQQATSPQQKAQFKKQLNDVHQEISERTQKQLKSFAEQHPEIKQPDSEPDQRLKR
SIO_010081: LA20249_RS11435
subclass of: SO_0000673
so part of: LA20249_RS11435
location: complement(34306..35430)
location: region:34306-35430:-1
so has part: feature:34306-35430:-1:exon

WP_057738189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34306-35430:-1:exon

LA20249_RS11440
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11440
old locus tag: LA20249_11420
so part of: sequence
location: complement(35434..35649)
location: region:35434-35649:-1
so has part: feature:35434-35649:-1:exon
subclass of: SO_0000010

position:35434:-1
position: 35434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35649:-1
position: 35649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35434-35649:-1:exon

LA20249_RS11440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11440
old locus tag: LA20249_11420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNELAVLASELPVLQAKGTYKYLKEITGNGAYYQVAWQKLSDGYVALYGTTPIQIRSLPTLNDIFEDEEG
SIO_010081: LA20249_RS11440
subclass of: SO_0000673
so part of: LA20249_RS11440
location: complement(35434..35649)
location: region:35434-35649:-1
so has part: feature:35434-35649:-1:exon

WP_003679901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35434-35649:-1:exon

LA20249_RS11445
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
gene: topB
locus tag: LA20249_RS11445
old locus tag: LA20249_11425
so part of: sequence
location: complement(35771..37906)
location: region:35771-37906:-1
so has part: feature:35771-37906:-1:exon
subclass of: SO_0000010

position:35771:-1
position: 35771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37906:-1
position: 37906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35771-37906:-1:exon

LA20249_RS11445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
gene: topB
locus tag: LA20249_RS11445
old locus tag: LA20249_11425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825295.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MTTVILAEKPSQARSYVQAFQKSTKKQGYYTVSDPVLPANTLVTYGLGHLVELATPDKYDQKYQQWALSNLPIFPDKYKFVVSASKKDQFKVVKDLLTKADTIIVATDSGREGSNIAWSIMSQAQIDVKKKTIKRLWLNSLEKDAIITGFKNLGDWHKDYLAYKEAQTRQISDWLIGMNGSPLYTLLLRKNGVRGVYSIGRVQTPTLYMVYQRDQAIKNFKPEPYFELNAEILANQQKFVAKLDPYQRFKDEKGLLAFMQAKNVQKGSQDGLIKDVQKQAKKRASPQLFSLSSLQSAMNKRYHASASQTLAAIQSLYEAKLLSYPRTDCAYITDEEFEYLVANLTKYLGLVSKQVAVTNTTPNKRYVNGKKVEEHYAIIMTKVVPTKEKLASLPKLQQQVYDLVLKTTLAMFADPYEYEETTIITQVGDANFKATGKVPTKQGWQALFDDHKAEQQETATLPLVHQGDQVKANLQTPQKETTPPVPFTEGTLITAMKTAGKTLDDEEAQAILKDVQGIGTSATRANVLEVLKKRGYLVTEKNKLHVSEAGITLCKAVELEPLLTSPEMTAKWEQALQQISTEERTPDNFLSQIKKFVAKLIADVPTQLTGSAAIKQQINHQQQAQKAAEVFLETPQATVINKQKFYIVKPKQGEDFTLPKKWSSKTLGKTAIKALVTKGETSKLKGFKSKKGKSFDAKLKLDGHKLSFDFD
SIO_010081: LA20249_RS11445
subclass of: SO_0000673
so part of: LA20249_RS11445
location: complement(35771..37906)
location: region:35771-37906:-1
so has part: feature:35771-37906:-1:exon

WP_057738188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35771-37906:-1:exon

LA20249_RS11450
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11450
old locus tag: LA20249_11430
so part of: sequence
location: complement(37913..38323)
location: region:37913-38323:-1
so has part: feature:37913-38323:-1:exon
subclass of: SO_0000010

position:37913:-1
position: 37913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38323:-1
position: 38323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37913-38323:-1:exon

LA20249_RS11450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11450
old locus tag: LA20249_11430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIAHWLLEKAKKDMRTDPFTTPSRRTKLSYYFDNLVSMVFYIMGIYLMLMDLYQELFTANHTDFLGTALMALVLLLGGLLFRWSAYADLKAINRYQHYLKQQSIEQQQELRRETWLKAAKQGKTELDQKLNHKE
SIO_010081: LA20249_RS11450
subclass of: SO_0000673
so part of: LA20249_RS11450
location: complement(37913..38323)
location: region:37913-38323:-1
so has part: feature:37913-38323:-1:exon

WP_003660151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37913-38323:-1:exon

LA20249_RS11455
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11455
old locus tag: LA20249_11435
so part of: sequence
location: complement(38338..39177)
location: region:38338-39177:-1
so has part: feature:38338-39177:-1:exon
subclass of: SO_0000010

position:38338:-1
position: 38338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39177:-1
position: 39177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38338-39177:-1:exon

LA20249_RS11455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11455
old locus tag: LA20249_11435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEIIQSAISHFFEWLLSGLLDGLFNICKAIIDQANQSLPIVKTWYAIFLSFATSLVVVVVLGRIVMTILKEADESTDVTWANIIMDGIKSAAVIPVFVFLQGFIQGSITLPLLKYMFSSDQKFTAKSISGMNKVPGLKDVGVSLPLQILFLLIFTVVTVVFFIKMCVFVADMAWYNLTIPLAAMSMATESFDYSNTWWKKYIYYNASIISQVLCMSLSVWCFTNMAKYGFIAFIASIGFGFLVVKTPDAVKDFWASTGVTKSTGMGAMRMFQNYFRNH
SIO_010081: LA20249_RS11455
subclass of: SO_0000673
so part of: LA20249_RS11455
location: complement(38338..39177)
location: region:38338-39177:-1
so has part: feature:38338-39177:-1:exon

WP_057738187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38338-39177:-1:exon

LA20249_RS11460
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11460
old locus tag: LA20249_11440
so part of: sequence
location: complement(39196..39585)
location: region:39196-39585:-1
so has part: feature:39196-39585:-1:exon
subclass of: SO_0000010

position:39196:-1
position: 39196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39585:-1
position: 39585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39196-39585:-1:exon

LA20249_RS11460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11460
old locus tag: LA20249_11440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKYRKYIIAVMTVLLIAVGLTACGKSTAQDLQSHQWTFASSKDNGMAATAKFSKSNLTLTQAGFSEVYTYKLIENKGNEQIKFIGKNSVSGGTETRLFKIKKQSDKYKLTPINTLAKSDTGTVSLIPK
SIO_010081: LA20249_RS11460
subclass of: SO_0000673
so part of: LA20249_RS11460
location: complement(39196..39585)
location: region:39196-39585:-1
so has part: feature:39196-39585:-1:exon

WP_057738186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39196-39585:-1:exon

LA20249_RS11465
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11465
old locus tag: LA20249_11445
so part of: sequence
location: complement(39597..41150)
location: region:39597-41150:-1
so has part: feature:39597-41150:-1:exon
subclass of: SO_0000010

position:39597:-1
position: 39597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41150:-1
position: 41150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39597-41150:-1:exon

LA20249_RS11465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11465
old locus tag: LA20249_11445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003712736.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MNGTILGIVDKRIVYQNNSTKPNRNIFVVGGPGSYKTQSVVITNLFNETENSIVVTDPKGELYEKTAGVKLAQGYQVHVVNFANMAHSDRYNPFDYIQRDIQAETVATKIVQSENAEGKKDVWFSTQRQLLKALILFVMNHRPPEQRNLAGVTQVLQENDVEAEEKGADSPLDTLFLDLTMTDPARRAYELGFKKAKGEMKASIIESLLATISKFVDKEVADFTSFSDFDLKEIGNAKVVLYVIIPVMDNTYESFINLFFSQLFDELYKLAADHHAKLPHQVDFILDEFVNLGKFPKYEEFLATCRGYGIGVTTICQTLTQLQALYGKDKAESILGNHAVKICLNAANDVTAKYFSDLLGKSTVKVETGSESTSHSKEESHSKSDSYSYTSRSLMTPDEIMRMPEDQSLLIFSNARPVKATKAFQFKLFPGADHLVNLSQNEYQGQPEASQETNFHQRVAKWKAKLKETAQKKAANKMSQTEEEQQQDNLDSDLERVSKKDSQTEKPEEDDDNNLFG
SIO_010081: LA20249_RS11465
subclass of: SO_0000673
so part of: LA20249_RS11465
location: complement(39597..41150)
location: region:39597-41150:-1
so has part: feature:39597-41150:-1:exon

WP_057738184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39597-41150:-1:exon

LA20249_RS11470
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11470
old locus tag: LA20249_11450
so part of: sequence
location: complement(41166..41555)
location: region:41166-41555:-1
so has part: feature:41166-41555:-1:exon
subclass of: SO_0000010

position:41166:-1
position: 41166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41555:-1
position: 41555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41166-41555:-1:exon

LA20249_RS11470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11470
old locus tag: LA20249_11450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQENYVTKNSYTRAEADLLIAISEWVSAIGQLPESKALALDDLAAIQAKQVLQQPLPGQLSFPTHTPSVYLSGLIYLVDVYLDLSKHLPPAHAINNDLNNVETKYVQVELANALKAKLDEDYQLADKA
SIO_010081: LA20249_RS11470
subclass of: SO_0000673
so part of: LA20249_RS11470
location: complement(41166..41555)
location: region:41166-41555:-1
so has part: feature:41166-41555:-1:exon

WP_057738183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41166-41555:-1:exon

LA20249_RS11475
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11475
old locus tag: LA20249_11455
so part of: sequence
location: complement(41552..42037)
location: region:41552-42037:-1
so has part: feature:41552-42037:-1:exon
subclass of: SO_0000010

position:41552:-1
position: 41552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42037:-1
position: 42037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41552-42037:-1:exon

LA20249_RS11475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11475
old locus tag: LA20249_11455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDKLLNSVKASWPYLLTLIIGLYLVEILAGSVMALSRYKLAFADHMPTVLKQLALHPWHYYNLYLGQKNPVLIIVSVAVVLYTIYFALKRNSKHKAWETADTETHGSATWGNLKELSDHYFSISPKDLTTSFNTMTDLEAVKMLIDKSQSETKPEKENLK
SIO_010081: LA20249_RS11475
subclass of: SO_0000673
so part of: LA20249_RS11475
location: complement(41552..42037)
location: region:41552-42037:-1
so has part: feature:41552-42037:-1:exon

WP_057738182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41552-42037:-1:exon

LA20249_RS11480
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11480
old locus tag: LA20249_11460
so part of: sequence
location: complement(42038..42406)
location: region:42038-42406:-1
so has part: feature:42038-42406:-1:exon
subclass of: SO_0000010

position:42038:-1
position: 42038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42406:-1
position: 42406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42038-42406:-1:exon

LA20249_RS11480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11480
old locus tag: LA20249_11460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MTLIKRVGKALAVIVVVLAVSGFASHQYVNHVEKQRPIVTLAKHPEKVLFFYRDDCPDCQSIFHQIYWHNAISHNIVLINMNQPQNRHYIQKYQLTSVPTLIHGKQRYTGTNQQRIKQIVGD
SIO_010081: LA20249_RS11480
subclass of: SO_0000673
so part of: LA20249_RS11480
location: complement(42038..42406)
location: region:42038-42406:-1
so has part: feature:42038-42406:-1:exon

WP_057738181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42038-42406:-1:exon

LA20249_RS11485
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11485
old locus tag: LA20249_11465
so part of: sequence
location: complement(42393..43010)
location: region:42393-43010:-1
so has part: feature:42393-43010:-1:exon
subclass of: SO_0000010

position:42393:-1
position: 42393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43010:-1
position: 43010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42393-43010:-1:exon

LA20249_RS11485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11485
old locus tag: LA20249_11465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSMVLSIAIGSLILIMSLGANAYQHSQVKQAQQQISRLQQQKRQVNQQLTKANQQKQLLSTQIDSYKTYQNNKDKSQAELSFNTVVTKFFKVMNNFKPKTYGQRKDGVKDLISDKLYQQYFSNKGTYGDSNSVSAKLNQLNLYTQSKQGQNMKGLAVVSYESKSGDNDWQKATVLYQVTFDTTTDRITAVQNLGSSFKASDLN
SIO_010081: LA20249_RS11485
subclass of: SO_0000673
so part of: LA20249_RS11485
location: complement(42393..43010)
location: region:42393-43010:-1
so has part: feature:42393-43010:-1:exon

WP_057738180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42393-43010:-1:exon

LA20249_RS11490
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11490
old locus tag: LA20249_11470
so part of: sequence
location: complement(43024..44178)
location: region:43024-44178:-1
so has part: feature:43024-44178:-1:exon
subclass of: SO_0000010

position:43024:-1
position: 43024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44178:-1
position: 44178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43024-44178:-1:exon

LA20249_RS11490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11490
old locus tag: LA20249_11470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tip lysozyme
translation: MQVLSFEYKKKKWKLIAYIVGGAILLIILLIAAVTGQLQENSCDNSTTTETQLDSKSMTENAKNIYAHWKQKYGATPQAAAGILGVLQLESRLDPKSVNSSSGATGLAQWLGGRKDKLEDLAHKENKSATNLGVQLDYLDQELNSSYYASNKQIFKYTDVHKATKSWLMDYEGMSKNPEQWYLSQRYGYADHWYSVFGASDPVAGNTLDNASSGDLTELGCDSDPSYSGGSIVKNAESMKGDFYYVQTHPSPDLGSDLKNPKKTGGTDCSGFVWLALNKAGYKVPANMGWFTGSMASDAKGGHQYLKQISENDAKAGDIVIVNQGAGAGNNGHTAILLGKWQGKATKIIEQGGVGDKVNESTFGTAFYSLLSGSDVTLARPIKK
SIO_010081: LA20249_RS11490
subclass of: SO_0000673
so part of: LA20249_RS11490
location: complement(43024..44178)
location: region:43024-44178:-1
so has part: feature:43024-44178:-1:exon

WP_057738179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43024-44178:-1:exon

LA20249_RS11495
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11495
old locus tag: LA20249_11475
so part of: sequence
location: complement(44179..45597)
location: region:44179-45597:-1
so has part: feature:44179-45597:-1:exon
subclass of: SO_0000010

position:44179:-1
position: 44179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45597:-1
position: 45597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44179-45597:-1:exon

LA20249_RS11495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11495
old locus tag: LA20249_11475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016370339.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VII secretion protein EssB/YukC
translation: MSKPNQLLNIEVGTFKRQGNQLILELNHNQFRYDQLSELNELKQTDSKFLQLVNVVEQGQKVVLTYTLPDKVRSLKNLPHENKAIRSAIAKEIMAQKVVNDSQYHIALNPANLWYYPMQHVWYAYRANELMPYDDKHSNLAKYKALILFCLTGTPYERLLSNPKEALAKHPDDYLQQVANATSLNELTEVVNGIEDFVSYHEWQAVETAQQKTKQRLWLSVAGVAIVAVLAVGLVHKSDERKYQSLANQNQAQVTRLKYSGQIQTALNDHKWSEAQKDMQRAGYPATKQVNVFLKHGQYQQALKVDPSQLNKVVNTAYANKDSGQVAKWELPTKATSKQKDQLKLEKAIVNYDTNTLNNQLSFTTNADVLLRMGQAFLAHNDTQDAQTVQTKLAGVNSPKAKYLKALLSLNAAKNEVSDAQKKLDDANKIDGSKDKDKDKKVDSAKSDLKNAQSDQSAAQKQVDQAKHKVGD
SIO_010081: LA20249_RS11495
subclass of: SO_0000673
so part of: LA20249_RS11495
location: complement(44179..45597)
location: region:44179-45597:-1
so has part: feature:44179-45597:-1:exon

WP_057738178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44179-45597:-1:exon

LA20249_RS11500
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11500
old locus tag: LA20249_11480
so part of: sequence
location: complement(45590..47605)
location: region:45590-47605:-1
so has part: feature:45590-47605:-1:exon
subclass of: SO_0000010

position:45590:-1
position: 45590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47605:-1
position: 47605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45590-47605:-1:exon

LA20249_RS11500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11500
old locus tag: LA20249_11480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF87 domain-containing protein
translation: MSFGDKVIDLFMPTKKESQQNSEPAVNKQKPEVEDFTKLIDRDSLHSLFPFSWEQYPTYVQSGENFIRVLAIADYPKRVYGNWLSELKRKKGVIDIVQYIDSASNNSMITYYKKTIQNKEAQKLNTFDPYKKKILQNYIDSANMQLDKYLDNSTTFVYQHMLIYLRANSLADLDDLTENVKNTLIKLQMKPLVPVKATFQAFWSTMPINENLMGDYTYKESNTEVASSMFPFDDAEILDLKPRSDIEGVNKDTNSLIAVDMLDRNKTLNQNQVIIGTSGVGKTTYMIQKILRYAIQDYQIYIIDPENEYTKIVEALGGAVLHLTSNAKYKINPLQIFSEEILSADEAVTNLDLLVKDKIQRLKGFFEVLKTGITQVELAILDDVVKQAYVNSGVLKYSRLKEIKDDQWPTLSNVYDELEKLADKDADKFNRVKDFYYILGSYTHGSNSLFDGHTNVNLKGKIISFDLKPLQSEQEVQSAAYLNTFQYLWDEITKDRHSRKKLFVDEFHFLTLHKAAATFFHQAYKRFRKYNAGAIAGTQQIQDVIEGTTDTGQNIGEAIIGNSYTKVFFGLDGKGVDDVITKLRMTFSDKEKKLLERRRQGEALMIYGSQRAFMRVELTEEELRLIDPEAYQEKYNRETAEQPDYQKRVILTPSEIDALTTTEEEGGTLNE
SIO_010081: LA20249_RS11500
subclass of: SO_0000673
so part of: LA20249_RS11500
location: complement(45590..47605)
location: region:45590-47605:-1
so has part: feature:45590-47605:-1:exon

WP_057738176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45590-47605:-1:exon

LA20249_RS11505
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
gene: trsD
locus tag: LA20249_RS11505
old locus tag: LA20249_11485
so part of: sequence
location: complement(47617..48276)
location: region:47617-48276:-1
so has part: feature:47617-48276:-1:exon
subclass of: SO_0000010

position:47617:-1
position: 47617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48276:-1
position: 48276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47617-48276:-1:exon

LA20249_RS11505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
gene: trsD
locus tag: LA20249_RS11505
old locus tag: LA20249_11485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016381866.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrsD/TraD family conjugative transfer protein
translation: MRLKKSKTANKSVKLDWDYQPPKINGGKETIDDMSLVVGMYGNYEVTKTGNLVGILEVSGINLDLLNETEQQDVFEDYGAFLMSTLGEGVDDTLQFLEPTIPVNMTAYLNGLKRRYLALQKDHPEQQFKIQLIASYLDHFTKVQESKNMTTKQHLLIVKVPIKDKSVKSLNLAVTHLDEKIEQVKRDIENALTDFDVTAKVLTSQEVQEILKNLINFNG
SIO_010081: LA20249_RS11505
subclass of: SO_0000673
so part of: LA20249_RS11505
location: complement(47617..48276)
location: region:47617-48276:-1
so has part: feature:47617-48276:-1:exon

WP_016381866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47617-48276:-1:exon

LA20249_RS11510
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11510
old locus tag: LA20249_11490
so part of: sequence
location: complement(48245..48607)
location: region:48245-48607:-1
so has part: feature:48245-48607:-1:exon
subclass of: SO_0000010

position:48245:-1
position: 48245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48607:-1
position: 48607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48245-48607:-1:exon

LA20249_RS11510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11510
old locus tag: LA20249_11490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014216295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKGKEFIFPENVDKDYGIWKDYTLKDFGYAALAGLVGLIFIAIPPYGLILVLIKIVIVVLAMTVVMAILTIRPVAARKNIKVRDNFKLKRRYANGQKLFYLKPKKRGELNAFEEEQNRQ
SIO_010081: LA20249_RS11510
subclass of: SO_0000673
so part of: LA20249_RS11510
location: complement(48245..48607)
location: region:48245-48607:-1
so has part: feature:48245-48607:-1:exon

WP_057738174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48245-48607:-1:exon

LA20249_RS11515
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11515
old locus tag: LA20249_11495
so part of: sequence
location: complement(48628..48963)
location: region:48628-48963:-1
so has part: feature:48628-48963:-1:exon
subclass of: SO_0000010

position:48628:-1
position: 48628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48963:-1
position: 48963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48628-48963:-1:exon

LA20249_RS11515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11515
old locus tag: LA20249_11495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016370337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CagC family type IV secretion system protein
translation: MKFSKVKALATTGATAIYLGLMNAQVVFAADGGEVKSKLTQAGKTIQGILTGLVVLVGICVALFIIIKRMPDADDPREKSEVYHAVGRVAGLVALAAAIIWILPWVYSLFT
SIO_010081: LA20249_RS11515
subclass of: SO_0000673
so part of: LA20249_RS11515
location: complement(48628..48963)
location: region:48628-48963:-1
so has part: feature:48628-48963:-1:exon

WP_057738172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48628-48963:-1:exon

LA20249_RS11520
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11520
old locus tag: LA20249_11500
so part of: sequence
location: complement(48965..49579)
location: region:48965-49579:-1
so has part: feature:48965-49579:-1:exon
subclass of: SO_0000010

position:48965:-1
position: 48965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49579:-1
position: 49579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48965-49579:-1:exon

LA20249_RS11520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11520
old locus tag: LA20249_11500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVESWQGINGKLIHNGQKAIVVKDEQELADQDKLQDRLKQEGKPIDEVRKALIKNTVKRQIKTDPLKISSWFNRHQDSKNAKKTEKLVSDKPTHQYKQIKNEMTFFGESFLEGFLGFYGLEVDNALGRYEHNLHVLETQELGQSEKEYYLATSENGRVKLATDPLPSQQIAEEQLNKFYQREPEETQAEQIQLRTSEDDRKEE
SIO_010081: LA20249_RS11520
subclass of: SO_0000673
so part of: LA20249_RS11520
location: complement(48965..49579)
location: region:48965-49579:-1
so has part: feature:48965-49579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48965-49579:-1:exon

LA20249_RS11525
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11525
old locus tag: LA20249_11505
so part of: sequence
location: complement(49618..49926)
location: region:49618-49926:-1
so has part: feature:49618-49926:-1:exon
subclass of: SO_0000010

position:49618:-1
position: 49618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49926:-1
position: 49926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49618-49926:-1:exon

LA20249_RS11525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11525
old locus tag: LA20249_11505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKEEWYNLGQASQKLGRSRSYVSLWLRRHKGEVPKNMIMEGGKSKLISAQGIEWIRDHIKKEGVLVSNSSANGDQHLESQLLGVTLLTIHFTGRVRGKLVV
SIO_010081: LA20249_RS11525
subclass of: SO_0000673
so part of: LA20249_RS11525
location: complement(49618..49926)
location: region:49618-49926:-1
so has part: feature:49618-49926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49618-49926:-1:exon

LA20249_RS11530
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11530
old locus tag: LA20249_11510
so part of: sequence
location: complement(50010..52070)
location: region:50010-52070:-1
so has part: feature:50010-52070:-1:exon
subclass of: SO_0000010

position:50010:-1
position: 50010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52070:-1
position: 52070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50010-52070:-1:exon

LA20249_RS11530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11530
old locus tag: LA20249_11510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRHYFYARSIMPESFILTPKNSPEWASDREQLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDEGMVADVAIHRDHPGNPHAHVMLTNRPFNPDGTWGQKTKTEYILDSHGNKTKTPAGNVRNRKIWLVDWDKKEKINQWRHNWAVSVNQVLEQKNIPDRISEKSFIEEGIDDTPTQHEGINSKRHERKEFNQQVKNYRKSKAGYKNNQEKVINRGHLDSLSKHFSFNEKKVVKELSHELKTYISLESLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELDFEQTTAAERRELIKETDSEQTVFKGSELNERLMNIRDDLLTQQLLTFTKRPYVGFKLLMQQEKEVKIELKYTLMIHDDSLESLEHVDQGLLEKYSPTEQQKITRAVKELRTIMAVKQVIKTQYHEVLKRAFPKGDLDELPMTKQEQAYTAVMYYDPALKPCQAETIEQWQANPPQVFSPQEHQQGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFFGECKADPTIKNSQIEKIQKQLKGQQAKDDQYRKANMGHYQPLNYKPVSPAYYLKTAFSDAIMTVLYARDEDYQRQKQERGLKETEWEMTKKQRQHQTRNRHEDGGMHL
SIO_010081: LA20249_RS11530
subclass of: SO_0000673
so part of: LA20249_RS11530
location: complement(50010..52070)
location: region:50010-52070:-1
so has part: feature:50010-52070:-1:exon

WP_057738170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50010-52070:-1:exon

LA20249_RS11535
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11535
old locus tag: LA20249_11515
so part of: sequence
location: 52322..52549
location: region:52322-52549:1
so has part: feature:52322-52549:1:exon
subclass of: SO_0000010

position:52322:1
position: 52322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52549:1
position: 52549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52322-52549:1:exon

LA20249_RS11535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11535
old locus tag: LA20249_11515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQESKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKSVDH
SIO_010081: LA20249_RS11535
subclass of: SO_0000673
so part of: LA20249_RS11535
location: 52322..52549
location: region:52322-52549:1
so has part: feature:52322-52549:1:exon

WP_083477898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52322-52549:1:exon

LA20249_RS11540
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11540
old locus tag: LA20249_11520
so part of: sequence
location: 52572..52850
location: region:52572-52850:1
so has part: feature:52572-52850:1:exon
subclass of: SO_0000010

position:52572:1
position: 52572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52850:1
position: 52850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52572-52850:1:exon

LA20249_RS11540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11540
old locus tag: LA20249_11520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQADNLSVEQTEELLKIFADYVNAHKPDKLKNDQPNN
SIO_010081: LA20249_RS11540
subclass of: SO_0000673
so part of: LA20249_RS11540
location: 52572..52850
location: region:52572-52850:1
so has part: feature:52572-52850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52572-52850:1:exon

LA20249_RS11545
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11545
old locus tag: LA20249_11525
so part of: sequence
location: complement(52840..53520)
location: region:52840-53520:-1
so has part: feature:52840-53520:-1:exon
subclass of: SO_0000010

position:52840:-1
position: 52840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53520:-1
position: 53520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52840-53520:-1:exon

LA20249_RS11545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11545
old locus tag: LA20249_11525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124583.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MIDKPQYIIVAGINGAGKSTLYDTFPILFDKTKRINADELLRQMGGDWHKDSDNLKAMKEEIKQLHYALDHQQSIHVETTLAGRGKAQLNLIDKAHKNGFEVTLLYVALRDENLAIQRVNERVQKGGHGVPVATIKKRYQQSKHNLPLVAFKSDKVMIYDNSEKFTSVYAREKGQVFKNDLRHFPWINQNITYPEKVQKQLQNFADQNPEVKPKNDPENKNDRPSY
SIO_010081: LA20249_RS11545
subclass of: SO_0000673
so part of: LA20249_RS11545
location: complement(52840..53520)
location: region:52840-53520:-1
so has part: feature:52840-53520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52840-53520:-1:exon

LA20249_RS11550
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11550
old locus tag: LA20249_11530
so part of: sequence
location: complement(53517..53702)
location: region:53517-53702:-1
so has part: feature:53517-53702:-1:exon
subclass of: SO_0000010

position:53517:-1
position: 53517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53702:-1
position: 53702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53517-53702:-1:exon

LA20249_RS11550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11550
old locus tag: LA20249_11530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010620892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
SIO_010081: LA20249_RS11550
subclass of: SO_0000673
so part of: LA20249_RS11550
location: complement(53517..53702)
location: region:53517-53702:-1
so has part: feature:53517-53702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53517-53702:-1:exon

LA20249_RS11555
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11555
old locus tag: LA20249_11535
so part of: sequence
location: complement(53749..54030)
location: region:53749-54030:-1
so has part: feature:53749-54030:-1:exon
subclass of: SO_0000010

position:53749:-1
position: 53749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54030:-1
position: 54030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53749-54030:-1:exon

LA20249_RS11555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11555
old locus tag: LA20249_11535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVQIDKELADNTEAVLSQLGLNPTTAINMFYKRIVADAALPFKPALSEAERANLSLLKATKETPVTEFKDAKEVADWLNDPDED
SIO_010081: LA20249_RS11555
subclass of: SO_0000673
so part of: LA20249_RS11555
location: complement(53749..54030)
location: region:53749-54030:-1
so has part: feature:53749-54030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53749-54030:-1:exon

LA20249_RS11560
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11560
old locus tag: LA20249_11540
so part of: sequence
location: complement(54257..55336)
location: region:54257-55336:-1
so has part: feature:54257-55336:-1:exon
subclass of: SO_0000010

position:54257:-1
position: 54257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55336:-1
position: 55336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54257-55336:-1:exon

LA20249_RS11560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11560
old locus tag: LA20249_11540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MDQSNFNFTNAKRAYEVKFYALPQILLQGEKYKDLSDSAILLYSVLRDRLSYSLSNNWVDENNNVYFIYTNNELKDLRNWSNNKINKIKHELMDANLLYQKHMGFNPRSGKNEPNRLYLADLEVTAKDVYIKREPLKSPEPLGTSGLLKKRNPHDTVEPLGTSGLLKKRNPHDTVSDTSESLGTSGLLKKRQDLDYTNNLDTNRYNIDTQKLDFSTAHFSPAELETQNRDLVTHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHQDIGVIIPLDDEELKPLMTKALRRYFNALRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPNDERA
SIO_010081: LA20249_RS11560
subclass of: SO_0000673
so part of: LA20249_RS11560
location: complement(54257..55336)
location: region:54257-55336:-1
so has part: feature:54257-55336:-1:exon

WP_010014830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54257-55336:-1:exon

LA20249_RS11565
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11565
old locus tag: LA20249_11545
so part of: sequence
location: complement(55943..56191)
location: region:55943-56191:-1
so has part: feature:55943-56191:-1:exon
subclass of: SO_0000010

position:55943:-1
position: 55943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56191:-1
position: 56191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55943-56191:-1:exon

LA20249_RS11565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11565
old locus tag: LA20249_11545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003712273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MSLDSFNHKKDEEMRESYETTLKDNKKDAVAFLKNISRKEVERKRSVTFSITESQLKKMDTAARKNGFKNRSEFLASIIDAI
SIO_010081: LA20249_RS11565
subclass of: SO_0000673
so part of: LA20249_RS11565
location: complement(55943..56191)
location: region:55943-56191:-1
so has part: feature:55943-56191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55943-56191:-1:exon

LA20249_RS11570
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11570
old locus tag: LA20249_11550
so part of: sequence
location: complement(56205..57011)
location: region:56205-57011:-1
so has part: feature:56205-57011:-1:exon
subclass of: SO_0000010

position:56205:-1
position: 56205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57011:-1
position: 57011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56205-57011:-1:exon

LA20249_RS11570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11570
old locus tag: LA20249_11550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKIITFTAIKGGVGKTTLTLNYGDWLAKHGKKVLLIDLDHQCNLTTVFEKTRRNNTIAEAFKENDNAQKVKIDSVGPNLDLIAGFIDLDVLGSYLENNSNKEMMLFMWFKNNSDSLSLTDYDYILIDTHPDFSTITKNAIAISNYLLSPITPSEHGYNAKFDLETRLEKFRKSLFDYRTGETYVDAKLFFIGNMIRHNTSMSRDLLKHIEGDETVATIIPERELFNKATARHASIFELANHDESILKQNQKFIEHADHLFQELANKTK
SIO_010081: LA20249_RS11570
subclass of: SO_0000673
so part of: LA20249_RS11570
location: complement(56205..57011)
location: region:56205-57011:-1
so has part: feature:56205-57011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56205-57011:-1:exon

LA20249_RS11575
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11575
old locus tag: LA20249_11555
so part of: sequence
location: complement(57108..57701)
location: region:57108-57701:-1
so has part: feature:57108-57701:-1:exon
subclass of: SO_0000010

position:57108:-1
position: 57108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57701:-1
position: 57701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57108-57701:-1:exon

LA20249_RS11575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11575
old locus tag: LA20249_11555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013729126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKDVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDLTQIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGISLAKQQGKYHGRKPQYTQDDPRLQHAFKLYQAGMSDVDVARNTGIKRTTFIRYRKKYRIFKNEL
SIO_010081: LA20249_RS11575
subclass of: SO_0000673
so part of: LA20249_RS11575
location: complement(57108..57701)
location: region:57108-57701:-1
so has part: feature:57108-57701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57108-57701:-1:exon

LA20249_RS11580
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11580
old locus tag: LA20249_11560
so part of: sequence
location: 58123..59328
location: region:58123-59328:1
so has part: feature:58123-59328:1:exon
subclass of: SO_0000010

position:58123:1
position: 58123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59328:1
position: 59328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58123-59328:1:exon

LA20249_RS11580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11580
old locus tag: LA20249_11560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825823.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSDLDQTNSYRYVIVGGGVVAGYAVKGIRQEDSEGEILIISQEADVPYERPALSKKLWLDDEFTEENIQIGAENYPNVTFKFKTTVTAINRQDKVITLDDSEQIKYEQLLLATGGEPRQIQGPSDPHVLVFRQWSDYRKLRKFSGPNKRVVIIGGGYVGTELASSLTQNETEVTMIFPEKALGEGKFPEPIRTEYEATFKRNGVTLMSGQFVQSYQRQGDHLTLLTKDGTVIAADTIIVGLGVTPRISLAEDSCLDLADGGVKVNEYLNTSDPAIWSAGDIASYPDHILGRQRIEHVDHARLSGELVGRNMAGAHMSYQHTPYFYSMIFYISWQAIGNIDPKLQLIFDRRTHGSLVYFIDTDKLVGVLVWNVKVNLDDVRALLANAPATDDLVGSIREKKA
SIO_010081: LA20249_RS11580
subclass of: SO_0000673
so part of: LA20249_RS11580
location: 58123..59328
location: region:58123-59328:1
so has part: feature:58123-59328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58123-59328:1:exon

LA20249_RS11585
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11585
old locus tag: LA20249_11565
so part of: sequence
location: complement(59613..60845)
location: region:59613-60845:-1
so has part: feature:59613-60845:-1:exon
subclass of: SO_0000010

position:59613:-1
position: 59613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60845:-1
position: 60845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59613-60845:-1:exon

LA20249_RS11585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11585
old locus tag: LA20249_11565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010499758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MKDENIIFTEDPKFMLVNGIKSLVYFAMLTKQIDRCLNCGLAGHLVKNGFNKNMIVVPSLSLRPTYISLKRQKYKCKSCNSIFVAKTSYVWEYCQIAQPVRQMILSETAFNTSLKDIGRRFNVSDKTVQRIIDEEAKMHKKSLPEHLPKHMAFDEFMSTDKMSFIWLDSDNHRTGDILPRRTSYQISKYFSRFPLKVRRQVKTISLDLNAGYINLVPKLFPKAKVVVDRFHIVQMMNRSLNSTRIQVMKRMPKRNKEYLFMKRDWKKFLESFDSIEKINPKYQYSVGYYETDLNLITKCLDLDEGFAKSYEVYQDILKAIRTGDTDTMNQILLNYHPLNTAMDQTMTSLRKYRKQVLNALKLKYSNGFLEGIIGRTKKIKSSAYGYRSWNNFTECINIQMFWLRASSSAK
SIO_010081: LA20249_RS11585
subclass of: SO_0000673
so part of: LA20249_RS11585
location: complement(59613..60845)
location: region:59613-60845:-1
so has part: feature:59613-60845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59613-60845:-1:exon

LA20249_RS11590
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11590
old locus tag: LA20249_11570
so part of: sequence
location: 61167..62342
location: region:61167-62342:1
so has part: feature:61167-62342:1:exon
subclass of: SO_0000010

position:61167:1
position: 61167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62342:1
position: 62342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61167-62342:1:exon

LA20249_RS11590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11590
old locus tag: LA20249_11570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLNLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTKEITTAEIAELIEKMYGAHYSKATVSNMTKAVNEQVQAFQQRRLASQYVAIFLDATYLQLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSLYSTNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGFKGLQDILEASFI
SIO_010081: LA20249_RS11590
subclass of: SO_0000673
so part of: LA20249_RS11590
location: 61167..62342
location: region:61167-62342:1
so has part: feature:61167-62342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61167-62342:1:exon

LA20249_RS11910
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11910
old locus tag: LA20249_11575
pseudo: true
so part of: sequence
location: complement(<62403..64131)
location: region:62403-64131:-1
so has part: feature:62403-64131:-1:exon
subclass of: SO_0000010

position:62403:-1
position: 62403
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:64131:-1
position: 64131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62403-64131:-1:exon

LA20249_RS11910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11910
old locus tag: LA20249_11575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639662.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
SIO_010081: LA20249_RS11910
subclass of: SO_0000673
so part of: LA20249_RS11910
location: complement(<62403..64131)
location: region:62403-64131:-1
so has part: feature:62403-64131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62403-64131:-1:exon

LA20249_RS11610
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11610
old locus tag: LA20249_11590
so part of: sequence
location: 64337..65124
location: region:64337-65124:1
so has part: feature:64337-65124:1:exon
subclass of: SO_0000010

position:64337:1
position: 64337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65124:1
position: 65124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64337-65124:1:exon

LA20249_RS11610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11610
old locus tag: LA20249_11590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNTTRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: LA20249_RS11610
subclass of: SO_0000673
so part of: LA20249_RS11610
location: join(64337..64595,64595..65124)
location: region:64337-65124:1
so has part: feature:64337-64595:1:exon
so has part: feature:64595-65124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64337-64595:1:exon

position:64595:1
position: 64595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64595-65124:1:exon

LA20249_RS11615
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11615
old locus tag: LA20249_11595
so part of: sequence
location: complement(65111..65470)
location: region:65111-65470:-1
so has part: feature:65111-65470:-1:exon
subclass of: SO_0000010

position:65111:-1
position: 65111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65470:-1
position: 65470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65111-65470:-1:exon

LA20249_RS11615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11615
old locus tag: LA20249_11595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLIFSIWAIALLIIAGTLTVLASKTNSDTQSNQQLAPQTQTKLINIADKALTKREAKQTRIVYVGKVVRHHQKFYLLAGIKRQTGKRVSTKPDSICNFFINESFKLKAISKKLSKIS
SIO_010081: LA20249_RS11615
subclass of: SO_0000673
so part of: LA20249_RS11615
location: complement(65111..65470)
location: region:65111-65470:-1
so has part: feature:65111-65470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65111-65470:-1:exon

LA20249_RS11620
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11620
old locus tag: LA20249_11600
so part of: sequence
location: 65649..66899
location: region:65649-66899:1
so has part: feature:65649-66899:1:exon
subclass of: SO_0000010

position:65649:1
position: 65649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66899:1
position: 66899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65649-66899:1:exon

LA20249_RS11620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11620
old locus tag: LA20249_11600
inference: COORDINATES: protein motif:HMM:NF033550.5
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MPQLNSILNLLNITDTNIDILNSNDKVIFRGSQKLHIKVIEGRLSYRLKKCPNCGFDCLIKNGARETNVRLGSLNGSEYHLKLWKQRYLCRSCKTTCGAHTNLVEKNQSMSRQIDQLIILLAKQSFTFKSIAMMLGISASTVARKIYGRLQLPKRARLLPKNICIDEFRSANHLFSFIACDADSHQMITLLPNRLSMKIIEHFKREYSLSERQQVESVSIDLNANYQGVIRRLFPNAKIIVDRFHIVQLVGRALDKARLSVLNSLSDKKSREYKALKSQWRMFHLFDDELDQANIRYIFGINEYMTQQNLVDIGLDADPVFKDVYQTYQNVLRSIKSKDPELLKQTLQEYKNNGSSMDTAITTFKNNYKYLVNSCELPYSNGPLEGLIGKIKKLKHNCYGFRNLHNFFVRIRLIIA
SIO_010081: LA20249_RS11620
subclass of: SO_0000673
so part of: LA20249_RS11620
location: 65649..66899
location: region:65649-66899:1
so has part: feature:65649-66899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65649-66899:1:exon

LA20249_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11915
so part of: sequence
location: complement(67363..67743)
location: region:67363-67743:-1
so has part: feature:67363-67743:-1:exon
subclass of: SO_0000010

position:67363:-1
position: 67363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67743:-1
position: 67743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67363-67743:-1:exon

LA20249_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11915
inference: COORDINATES: protein motif:HMM:NF037926.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYYLLALEGTSFRLFKIVDKTVAPVKLDADAPTDLVETLGSEKRGGELNFTGQGGSTTFHGHNETSKEKQIDLERYYREINKYLVETIDLTVPIVLMDYLKIWHYSNEFQKSCLYLKFKLANPQRT
SIO_010081: LA20249_RS11915
subclass of: SO_0000673
so part of: LA20249_RS11915
location: complement(67363..67743)
location: region:67363-67743:-1
so has part: feature:67363-67743:-1:exon

WP_236900123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67363-67743:-1:exon

LA20249_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 1423720
locus tag: LA20249_RS11920
so part of: sequence
location: complement(67811..68038)
location: region:67811-68038:-1
so has part: feature:67811-68038:-1:exon
subclass of: SO_0000010

position:67811:-1
position: 67811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68038:-1
position: 68038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67811-68038:-1:exon

LA20249_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1423720
locus tag: LA20249_RS11920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSINLNKLKYQQDERLHLKSALTEIKKYSMEHPELNYKELERQVDNLIDQNLPYQGITLFIQGNTLELFVLPRTT
SIO_010081: LA20249_RS11920
subclass of: SO_0000673
so part of: LA20249_RS11920
location: complement(67811..68038)
location: region:67811-68038:-1
so has part: feature:67811-68038:-1:exon

WP_236900124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67811-68038:-1:exon