Pacificitalea manganoxidans strain DY25 plasmid pDY25-G, complete sequence.
type: Entry
definition: Pacificitalea manganoxidans strain DY25 plasmid pDY25-G, complete sequence.
sequence version: NZ_CP021411.1
sequence date: 2022-12-31
sequence: sequence
division: CON
label: NZ_CP021411.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07150770
keyword: RefSeq
source: Pacificitalea manganoxidans
organism: Pacificitalea manganoxidans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pacificitalea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP021411.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.3\nAssembly Name :: CelManDY25\nLong Assembly Name :: Celeribacter manganoxidans DY25\nGenome Coverage :: 100x\nSequencing Technology :: Complete Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 01:54:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,656\nCDSs (total) :: 3,599\nGenes (coding) :: 3,554\nCDSs (with protein) :: 3,554\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 19 of 45\nPseudo Genes (incomplete) :: 30 of 45\nPseudo Genes (internal stop) :: 5 of 45\nPseudo Genes (multiple problems) :: 8 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16653
topology: circular
so has quality: SO_0000988
location: 1..16653
location: region:1-16653:1
RO_0002162: 1411902

NZ_CP021411
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07150770
type: BioSample
SIO_000068: biosample

1
title: Comparative genomic and metabolic analysis of manganese-oxidizing mechanisms in Celeribater manganoxidans DY25T: its adaption to the environment of polymetallic nodule
author: Wang, X.
journal: Unpublished

2
title: Direct Submission
author: Wang, X.
journal: Submitted (22-MAY-2017) College of Marine Life Sciences, Ocean University of China, 5 Yushan Road, Qingdao, Shandong 266003, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16653:1
position: 16653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16653:1:source
so part of: sequence
organism: Pacificitalea manganoxidans
mol type: genomic DNA
strain: DY25
isolation source: sediment
type material: type strain of Celeribacter manganoxidans
plasmid: pDY25-G
country: Pacific Ocean
collection date: 2012-08

1411902
type: Taxonomy
SIO_000068: taxonomy

CBW24_RS18450
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18450
old locus tag: CBW24_18140
so part of: sequence
location: complement(join(16603..16653,1..501))
location: region:1-16653:-1
so has part: feature:1-501:-1:exon
so has part: feature:16603-16653:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16653:-1
position: 16653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-501:-1:exon

position:501:-1
position: 501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16603-16653:-1:exon

position:16603:-1
position: 16603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CBW24_RS18450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18450
old locus tag: CBW24_18140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009804243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDTPTSPAPLSDDDLRETLDLLATAVASISDRVDDQTRVLDRVNKTATEARSAAFAARNQTNPEHYGEIVGATIDGRIGDTLDRVGQMAGDLLRASNHTQEVFRKAEDARSDAMRQVWEREQKLDRFKNRLPWFGLGAVVLALVLTVTLPRFLASNTSTCAVLGASWTTTTTGVDACVFYQR
SIO_010081: CBW24_RS18450
subclass of: SO_0000673
so part of: CBW24_RS18450
location: complement(join(16603..16653,1..501))
location: region:1-16653:-1
so has part: feature:1-501:-1:exon
so has part: feature:16603-16653:-1:exon

WP_157773281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16603-16653:-1:exon

CBW24_RS18175
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18175
old locus tag: CBW24_18145
so part of: sequence
location: complement(519..2189)
location: region:519-2189:-1
so has part: feature:519-2189:-1:exon
subclass of: SO_0000010

position:519:-1
position: 519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189:-1
position: 2189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519-2189:-1:exon

CBW24_RS18175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18175
old locus tag: CBW24_18145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009804242.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MRSVMLVFGGLFRFFGRLIFTPILLGWMIGAVLFGAMLGSLVATPFIFAFFDQTPGESASQWLVFGPFMFVGAVFGFQYWRMASGADAYFGLTGDSHGSARFANRKELKKLERGKGQEDRGLLIGRNPHTGRLLRYDGPAHLITLAPTRAGKGVGTVIPNLLAAERSVLVIDPKGENARIAGEARRRFGTVHVLDPFEVSGHPSAAYNPLDRLTPDSLDLGEDAASLTEALVMDPPGQVTEAHWNEEAKAILGGLIMFCVCHEDRDRRSLATVREYLTLPPEKLRALLELMQDSDAAGGLIARAANRFLGKADREAASVLSNAQRHTHFLDSPRIAKCLARSDFAFSDLRHRITSVFLVLPPNRMDAYSRWLRLLVSQALQDIARDAERPQGSSEGRSERLKAPTLFLLDEFAALGRLEAVERAMGLMAGYGLQLWPILQDMSQLKDLYGDRAGTFIANAGVQQVFGVNDFETAKWLSQMIGQETAGFQTDSFKPGDGPSFSNNLTGRDLLTPDEIMQLPPDRQLLRVQGQATAVAQKLRYYADPEFAGLFTPDAR
SIO_010081: CBW24_RS18175
subclass of: SO_0000673
so part of: CBW24_RS18175
location: complement(519..2189)
location: region:519-2189:-1
so has part: feature:519-2189:-1:exon

WP_097374658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519-2189:-1:exon

CBW24_RS18180
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18180
old locus tag: CBW24_18150
so part of: sequence
location: complement(2189..2467)
location: region:2189-2467:-1
so has part: feature:2189-2467:-1:exon
subclass of: SO_0000010

position:2467:-1
position: 2467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2189-2467:-1:exon

CBW24_RS18180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18180
old locus tag: CBW24_18150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MAETELERAEKRYAQAKARLQALKNREATRQRKLDTRRKVILGGALMDLAERDSSAAAMLDRLIRNLSREQDRKAFAEWDAPSPAPSDEGAT
SIO_010081: CBW24_RS18180
subclass of: SO_0000673
so part of: CBW24_RS18180
location: complement(2189..2467)
location: region:2189-2467:-1
so has part: feature:2189-2467:-1:exon

WP_097374659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2189-2467:-1:exon

CBW24_RS18185
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18185
old locus tag: CBW24_18155
so part of: sequence
location: 3110..4396
location: region:3110-4396:1
so has part: feature:3110-4396:1:exon
subclass of: SO_0000010

position:3110:1
position: 3110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4396:1
position: 4396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3110-4396:1:exon

CBW24_RS18185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18185
old locus tag: CBW24_18155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MASYHLSVKTIKRSAGRSATAAAAYRVGERIECQREGRVHDYTRKQGIEETFILTPKDAPDWASDRSRLWNEAEASETRRNSVTAREWELALPSEISAEARSQITRDFAQELVSRYGVAVDVAIHAPHREGDQRNHHAHVLTSTRKLEAGGFTAKTRVLDSAKTGGVEIEQMRGLWAELQNRALERVGEVERVDHRSLEKQRETALDRGDKLTAEELDRDPELKLGPAANSMERRAKVMAERQGREYVPVTERGAVVHAARQARAAFREMRERLDIARETYGIEREAGQGRISAGLAALRASTSKERGERNPEDFRERLSQVVGRSRDQDDTPKPEGRNYARERLKEIMEKDAGRDGQAAVHKLDGHSEYDLGEDTGRDGRKPSVNERLKDVLNKPRERLEIEDERDQEKNQEVEKDRDIDRDPGLSH
SIO_010081: CBW24_RS18185
subclass of: SO_0000673
so part of: CBW24_RS18185
location: 3110..4396
location: region:3110-4396:1
so has part: feature:3110-4396:1:exon

WP_097374660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3110-4396:1:exon

CBW24_RS18190
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18190
old locus tag: CBW24_18160
so part of: sequence
location: complement(4386..4724)
location: region:4386-4724:-1
so has part: feature:4386-4724:-1:exon
subclass of: SO_0000010

position:4386:-1
position: 4386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4724:-1
position: 4724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4386-4724:-1:exon

CBW24_RS18190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18190
old locus tag: CBW24_18160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQTIDLELNVTTEQGLRALAEEGHTVEVLCKADPERKGPSWYGLWIMRTVGSDGQEKILVTARTRVTQNAIRVREFKTATGVISFLVGVGFSQASIPMKNGEMTSHRLVSD
SIO_010081: CBW24_RS18190
subclass of: SO_0000673
so part of: CBW24_RS18190
location: complement(4386..4724)
location: region:4386-4724:-1
so has part: feature:4386-4724:-1:exon

WP_097374661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4386-4724:-1:exon

CBW24_RS18195
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18195
old locus tag: CBW24_18165
so part of: sequence
location: 5214..6098
location: region:5214-6098:1
so has part: feature:5214-6098:1:exon
subclass of: SO_0000010

position:5214:1
position: 5214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6098:1
position: 6098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5214-6098:1:exon

CBW24_RS18195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18195
old locus tag: CBW24_18165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011536558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTAEKFDVYSHVTNQIIAQIEAGTPPWRKPWTGGGVSASLPERFNGEAYRGINILMLWATAMAKDYSSARWMTFNQAKQLGGHVRKGEKSATVVKYGTVEREDDNGEERQIPYAKAYRVFNADQIEGLPAEFYILPDPPRDLGTEADPELEVFFAATGAQIDVTEEPRAYYNIKTDRIHMPPIGTFHRAAGYYGTLAHELTHWTGATKRLDRLGRFNDRKAYAFEELVAEIGNCMLCAQIGVEPEFDQSAAYVEGWLEAMKEDSRAIFRAASEAQKAVDYIMARTVQADRMAAE
SIO_010081: CBW24_RS18195
subclass of: SO_0000673
so part of: CBW24_RS18195
location: 5214..6098
location: region:5214-6098:1
so has part: feature:5214-6098:1:exon

WP_097374662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5214-6098:1:exon

CBW24_RS18200
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18200
old locus tag: CBW24_18170
so part of: sequence
location: complement(6322..7470)
location: region:6322-7470:-1
so has part: feature:6322-7470:-1:exon
subclass of: SO_0000010

position:6322:-1
position: 6322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7470:-1
position: 7470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6322-7470:-1:exon

CBW24_RS18200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18200
old locus tag: CBW24_18170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012287983.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4263 domain-containing protein
translation: MDDANFFKLRKSGKTYISKVFKFDERHVERFRHVRMVIEGSDSLHFGEIEGAMCLRLTGEKRKTQVTALVSQDDQKVRRVSLQTYQSRKNDWIQGYEENEFTFRGDELKRLLAFLHQIKFVDLSNEENFQIEDISQGEGPKAIIDASERGVVEQVRQMDTGQREAVLDALRGSLTSDEINLLLGRRQGLQMFTDRLKACDWAETDWQNFFEREQWVFGYGLDYRIMRQFGREMVVGSGGGTDNRNKPIVDFLGTFTDYTVLVEIKRPDTKIFKPSKGGRAGTWEFSTEFTSAVSQIIQQKAEWLSFAQSGDHWNKDGDKLAARTRNAKSVLIIGSQKEFDGDGREAQIMRDTFELFRRESRTIDILTFDELHERAAFILRSD
SIO_010081: CBW24_RS18200
subclass of: SO_0000673
so part of: CBW24_RS18200
location: complement(6322..7470)
location: region:6322-7470:-1
so has part: feature:6322-7470:-1:exon

WP_097374663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6322-7470:-1:exon

CBW24_RS18205
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18205
old locus tag: CBW24_18175
so part of: sequence
location: 7553..8236
location: region:7553-8236:1
so has part: feature:7553-8236:1:exon
subclass of: SO_0000010

position:7553:1
position: 7553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8236:1
position: 8236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7553-8236:1:exon

CBW24_RS18205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18205
old locus tag: CBW24_18175
inference: COORDINATES: protein motif:HMM:NF037889.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MDPARVRASFDAQLTEAISFYHTVEASLSSAADVTRLSASTMISAATLWESFLSDLIVAYINRDPSQFAIHLQHALNEDLTDKQKQILNRYAPYKAPTSIDRATIISLIDNDGNNITFSNAQALKKGAKRWISAANMAGINALTGQQMAIINLWIALRNHIAHDSERSKVALQRAVSHGALHGTGLHRAQNAIHTPGVYLKSKHRQPIGNPRIEEILGHMQQIAAAI
SIO_010081: CBW24_RS18205
subclass of: SO_0000673
so part of: CBW24_RS18205
location: 7553..8236
location: region:7553-8236:1
so has part: feature:7553-8236:1:exon

WP_097374664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7553-8236:1:exon

CBW24_RS18210
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18210
old locus tag: CBW24_18180
so part of: sequence
location: 8372..8908
location: region:8372-8908:1
so has part: feature:8372-8908:1:exon
subclass of: SO_0000010

position:8372:1
position: 8372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8908:1
position: 8908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8372-8908:1:exon

CBW24_RS18210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18210
old locus tag: CBW24_18180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIIGYGRVSTENQQLDAQIEALKNGGAERIFADKISGSKRKRPELDKMLDQLRRGDVVLVTKYDRLARSLTDLLDIVAQIEEAEAGFRSLAEDIDTTTPAGRLIFHVFASIAQFERERIRERTMEGLEAARKKGRVGGRPAALSEDQKAEVLRLKGEGRTMKDIAALFRVSLATVKRV
SIO_010081: CBW24_RS18210
subclass of: SO_0000673
so part of: CBW24_RS18210
location: 8372..8908
location: region:8372-8908:1
so has part: feature:8372-8908:1:exon

WP_097374665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8372-8908:1:exon

CBW24_RS18215
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18215
old locus tag: CBW24_18185
so part of: sequence
location: complement(8937..11264)
location: region:8937-11264:-1
so has part: feature:8937-11264:-1:exon
subclass of: SO_0000010

position:8937:-1
position: 8937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11264:-1
position: 11264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8937-11264:-1:exon

CBW24_RS18215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18215
old locus tag: CBW24_18185
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MELIDFQERASSQIAQRFFDYSANPLMVDRTTTIPFLQTLVAITGSGKTLMLADAVSQMRDGLGVAPVVLWISKGRVVVSQTFENLSSGKYADNLSGFNIVPLLEVAPDHLSSADTPVLLVATVGKFAVEDSSSEDRKVYRAQLDLAEESLWDQLKKRRTEKGQRRPLIIVYDEGHNLSDLQSERLLELSPDALIVASATLTLPPRLNNVMGRLRNDKGWKDEDFSTSVSSPEVVLSGLVKERISIDGYITPLEPALDNLLGDLKIAQEVARDHKLPFTPKAIYVCSTNTVDGMSIAEDLKRPFKERQARPILIWRHLVEVAKIKPEKIAVYCQLKFSKDSPKPPEMHLFDGGEKDYARFTAGDYEHVIFNLGLQEGWDDPACCFAYIDKEMASARQITQVVGRVLRQPGAEHYNDPILNTAHFHIRTDEKGVFDDILRDIRKDLASEHPSITLVVKDEKARGKRDRIDPQPPRTIPTVGIESSRALEPISRIVKSIMDFRSDAQNTVGQGSRMQVLQKVGEESDAQFEWVDVEHSNRVTARSVFRREIQRSYPGGLRRAGGPVNLVDIEEPKFDAMIELSSPAADHLRTKAQEVVAAYIQHSAIFQNDVDSPYSVGPVAIDPNSNEEFKRSLHGKYSGLNPLEVKFARALDRTQRVWARNPVGSGYSLPLLHEGKAYWPDFLVWVDKSVIVIDTKGDHLLVEASASKLFEIDGAESGKRVLLRLVSEGHVEILNGTVHKRSKTGFTVWAWRNGRLQPTHCENEKETVEAALRID
SIO_010081: CBW24_RS18215
subclass of: SO_0000673
so part of: CBW24_RS18215
location: complement(8937..11264)
location: region:8937-11264:-1
so has part: feature:8937-11264:-1:exon

WP_097374666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8937-11264:-1:exon

CBW24_RS18220
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18220
old locus tag: CBW24_18190
so part of: sequence
location: complement(11264..13276)
location: region:11264-13276:-1
so has part: feature:11264-13276:-1:exon
subclass of: SO_0000010

position:13276:-1
position: 13276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11264-13276:-1:exon

CBW24_RS18220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18220
old locus tag: CBW24_18190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009225518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MEFDFETELSKLSREELERLAKSMMTSGVALSFHGKRSAMQIAKKVRPRQTRREPKLHVGSPEAQSKNLLIEGENLQAMVTLYKYRGQVDLIITDPPYNTGQYFRYNDRWDNDPNDPELGTIVSSEDGSRHTKWIKAMMPRLQIMKAMLKPSGVLAICIDDNELFHLGMMLDEVFGEKNRLAIINWQKTYSPKKANHVASATEYVLVYAKDQSLAKTEHLARDEAMNARFTNRDNDPKGAWRPGDLAAKDKRDRTIYAIQSPFTGKLHYPEAEHEYDQPISVPTRHWSGMTKKEFRTRLEEWGTPYVEQDIGDGRGKALILKGSSVKLNGYAPEADPVVQKAMKRAQTILSQGNSGERVLPTIVFSDDKQRNPGAGRPAIKRHLELISQGRIPWTFWADEAYEEPIEIGAASWEHKESGHSQTGLNELDAIVGKGHGFQTVKPLKLIKKIAHIWCPQNGLVLDPYAGSGTTGHAILELNSEIGSDRRFILIEQGSPENGDKYARTLTWQRLHNAITGKRPGGKKAAPLGGGFEYRLLTKTIDAKTVLTMQRDELIDVVLTSHWENHKRSAPSLIRVDEESYQYLVGLDQNGEGYFLIWDNGGPVGSLSIDTYKKVALEAKKASIEPPFHVYARYEMFQSPNVRFWKIPDKILADLGLNENDEYNNEDESA
SIO_010081: CBW24_RS18220
subclass of: SO_0000673
so part of: CBW24_RS18220
location: complement(11264..13276)
location: region:11264-13276:-1
so has part: feature:11264-13276:-1:exon

WP_097374667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11264-13276:-1:exon

CBW24_RS18225
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18225
old locus tag: CBW24_18195
so part of: sequence
location: complement(13513..13803)
location: region:13513-13803:-1
so has part: feature:13513-13803:-1:exon
subclass of: SO_0000010

position:13513:-1
position: 13513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13803:-1
position: 13803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13803:-1:exon

CBW24_RS18225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18225
old locus tag: CBW24_18195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009505437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSAFESIKQGLEEAKAFSKGQGTDARVHEIAVPAINVAEVRAKTGLSQAEFARSIGVAKGTLLNWEHGRRQPNGPAQVLLALISRKPSVVQELLGS
SIO_010081: CBW24_RS18225
subclass of: SO_0000673
so part of: CBW24_RS18225
location: complement(13513..13803)
location: region:13513-13803:-1
so has part: feature:13513-13803:-1:exon

WP_097374668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13803:-1:exon

CBW24_RS18230
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18230
old locus tag: CBW24_18200
so part of: sequence
location: complement(13800..14081)
location: region:13800-14081:-1
so has part: feature:13800-14081:-1:exon
subclass of: SO_0000010

position:13800:-1
position: 13800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14081:-1
position: 14081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13800-14081:-1:exon

CBW24_RS18230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18230
old locus tag: CBW24_18200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017671731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSDDEREAAIVWIAENPEAGTSLGGGLRKVRIPRDGGGKRGGFRTIYVFGGRHMPIFLVTVFAKNEKANLTNKEQAAAIELSKEIVSMWSDKQ
SIO_010081: CBW24_RS18230
subclass of: SO_0000673
so part of: CBW24_RS18230
location: complement(13800..14081)
location: region:13800-14081:-1
so has part: feature:13800-14081:-1:exon

WP_232530378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13800-14081:-1:exon

CBW24_RS18455
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18455
so part of: sequence
location: complement(14179..14532)
location: region:14179-14532:-1
so has part: feature:14179-14532:-1:exon
subclass of: SO_0000010

position:14179:-1
position: 14179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14532:-1
position: 14532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14179-14532:-1:exon

CBW24_RS18455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGTFLNLSDNDQEEAPVPKIGAGLKRKKKASRPRANAEAVAAAGRANGFNRSTDTAQPSPAPRRGRPPLNEDMTYWRIYVSSDLRNRLNELRDQEGRRLNDVLADMLAAYEDGKVK
SIO_010081: CBW24_RS18455
subclass of: SO_0000673
so part of: CBW24_RS18455
location: complement(14179..14532)
location: region:14179-14532:-1
so has part: feature:14179-14532:-1:exon

WP_157773280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14179-14532:-1:exon

CBW24_RS18235
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18235
old locus tag: CBW24_18205
so part of: sequence
location: complement(14532..15206)
location: region:14532-15206:-1
so has part: feature:14532-15206:-1:exon
subclass of: SO_0000010

position:15206:-1
position: 15206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14532-15206:-1:exon

CBW24_RS18235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18235
old locus tag: CBW24_18205
inference: COORDINATES: protein motif:HMM:NF018691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIVSVLSPKGGCGKSTATLTLASAFAKNEDLSIAIVDADPRQSIARVWLGKRNEENLGVPPFKVISDPSDSTILDTLEAAGDDHDLVFVDLEGVAGLMASYAASASDLCIVPMRPSALDGDAAGAALKMIRDAGRAARRTVPARILITQTDAAIVTTSHKELLAELDGAGVERLQTELMRRAPFERVMAEGRTLFELQSSQSVKSAISNTARLGKELAEILEAH
SIO_010081: CBW24_RS18235
subclass of: SO_0000673
so part of: CBW24_RS18235
location: complement(14532..15206)
location: region:14532-15206:-1
so has part: feature:14532-15206:-1:exon

WP_097374670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14532-15206:-1:exon

CBW24_RS18240
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18240
old locus tag: CBW24_18210
so part of: sequence
location: complement(15322..16347)
location: region:15322-16347:-1
so has part: feature:15322-16347:-1:exon
subclass of: SO_0000010

position:15322:-1
position: 15322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16347:-1
position: 16347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15322-16347:-1:exon

CBW24_RS18240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18240
old locus tag: CBW24_18210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011251574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MDEDHRPLLPDRHPQANLFICDVADAVIKSDMASMEHPIFTLSKKPIRDVKRYEHGDVVLEVTPGPKGIANIYDKDILIFAISQIMAARNEGRPYSREIQFQAQDFLEFSNRHTGGHDYDLLRDSLDRLDSTRLRTTIKTGGEETWEAFGLIEGAKIKRKRHDGRVTEWGLKLSEWLFKAIEANEVLTLHPDYFRLRKPIERRIYEIARKHCGSKKSWQIGLKKLQKKCGSSDAIRNFRLAVRALCDFDHLPDYSVSMEGDMVSFRSRVSQQVIVGSGFTTKLMPDTYEAARQAAPGWDVYVVEQEWRAWVMNLLDQGMEPPRNPDSAFIGFCRKWAARQK
SIO_010081: CBW24_RS18240
subclass of: SO_0000673
so part of: CBW24_RS18240
location: complement(15322..16347)
location: region:15322-16347:-1
so has part: feature:15322-16347:-1:exon

WP_097374671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15322-16347:-1:exon