Pacificitalea manganoxidans strain DY25 plasmid pDY25-F, complete sequence.
type: Entry
definition: Pacificitalea manganoxidans strain DY25 plasmid pDY25-F, complete sequence.
sequence version: NZ_CP021410.1
sequence date: 2022-12-31
sequence: sequence
division: CON
label: NZ_CP021410.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07150770
keyword: RefSeq
source: Pacificitalea manganoxidans
organism: Pacificitalea manganoxidans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pacificitalea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP021410.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.3\nAssembly Name :: CelManDY25\nLong Assembly Name :: Celeribacter manganoxidans DY25\nGenome Coverage :: 100x\nSequencing Technology :: Complete Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 01:54:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,656\nCDSs (total) :: 3,599\nGenes (coding) :: 3,554\nCDSs (with protein) :: 3,554\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 19 of 45\nPseudo Genes (incomplete) :: 30 of 45\nPseudo Genes (internal stop) :: 5 of 45\nPseudo Genes (multiple problems) :: 8 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42252
topology: circular
so has quality: SO_0000988
location: 1..42252
location: region:1-42252:1
RO_0002162: 1411902

NZ_CP021410
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07150770
type: BioSample
SIO_000068: biosample

1
title: Comparative genomic and metabolic analysis of manganese-oxidizing mechanisms in Celeribater manganoxidans DY25T: its adaption to the environment of polymetallic nodule
author: Wang, X.
journal: Unpublished

2
title: Direct Submission
author: Wang, X.
journal: Submitted (22-MAY-2017) College of Marine Life Sciences, Ocean University of China, 5 Yushan Road, Qingdao, Shandong 266003, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42252:1
position: 42252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42252:1:source
so part of: sequence
organism: Pacificitalea manganoxidans
mol type: genomic DNA
strain: DY25
isolation source: sediment
type material: type strain of Celeribacter manganoxidans
plasmid: pDY25-F
country: Pacific Ocean
collection date: 2012-08

1411902
type: Taxonomy
SIO_000068: taxonomy

CBW24_RS17955
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17955
old locus tag: CBW24_17925
so part of: sequence
location: 4..1017
location: region:4-1017:1
so has part: feature:4-1017:1:exon
subclass of: SO_0000010

position:4:1
position: 4
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017:1
position: 1017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-1017:1:exon

CBW24_RS17955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17955
old locus tag: CBW24_17925
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010443079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MQKVLITGTAGFIGFHLAKLLLAEGFRVQGYDGMTDYYDVTLKQRRHAMLLQNENFSAKEGMLEDQASFDALADEFQPDVIVHLAAQAGVRYSLENPRAYLDSNVIGTFNVMEAARRLEVKHLLMASTSSVYGANEEMPFTETERTDTQLTIYAATKKATESMGHSYAHLWNLPVTMFRFFTVYGTWGRPDLALYKFVDAILDDRPIDIYNHGDMYRDFTYVDDLVRGIRLLIDAVPERPTSRDDIPEWDSLSPAAPFRVVNIGNSDKVRLLDFVDAIEDALGKKAERNYMDMQKGDVPATWADATLLQELTGYRPQTDFKDGIARFVAWFREYYGK
SIO_010081: CBW24_RS17955
subclass of: SO_0000673
so part of: CBW24_RS17955
location: 4..1017
location: region:4-1017:1
so has part: feature:4-1017:1:exon

WP_097374656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4-1017:1:exon

CBW24_RS17960
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17960
old locus tag: CBW24_17930
so part of: sequence
location: 1017..2069
location: region:1017-2069:1
so has part: feature:1017-2069:1:exon
subclass of: SO_0000010

position:2069:1
position: 2069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017-2069:1:exon

CBW24_RS17960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17960
old locus tag: CBW24_17930
inference: COORDINATES: protein motif:HMM:NF013884.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MVSVDPTGSHKVRTNKLASLEIGRGIAAIAVVAHHAELSSNAFTSGSTRHWFSFGALGVDFFFVLSGFIIFYVHGSDTRSFSMARRYLGRRLKRIFVPYLPVSAALIVAYLLLPGLSEGNRDWGLLTSLTLLPSDKPPALSVAWTLTFELVFYLFFLLFYATRYFWTLVTAWAAVTISSMFLISGDYGMPIIRTFLAPITLEFIAGMAMAKVSRKIPNELWAAALTTGTLVCIMFFLTPDAHRVLFGIGLAPVVLGLALAEARFDLRVPTWALLLGAASYAIYLIHNPLQSLIARAGAPWDSWMITFLNCVFLSVIGGIIYHLFFEKPALKYFSDLESRRIYQLKATEYE
SIO_010081: CBW24_RS17960
subclass of: SO_0000673
so part of: CBW24_RS17960
location: 1017..2069
location: region:1017-2069:1
so has part: feature:1017-2069:1:exon

WP_198405307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1017-2069:1:exon

CBW24_RS17965
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: tviB
locus tag: CBW24_RS17965
old locus tag: CBW24_17935
so part of: sequence
location: 2062..3336
location: region:2062-3336:1
so has part: feature:2062-3336:1:exon
subclass of: SO_0000010

position:2062:1
position: 2062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336:1
position: 3336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062-3336:1:exon

CBW24_RS17965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: tviB
locus tag: CBW24_RS17965
old locus tag: CBW24_17935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019362492.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB
translation: MSNEPRKIAVIGLGYVGLPLAAEFGKLRPTVGFDINQARIAELKDGHDRTRETTAEELATATQLSFATDTLDIADCSIYIVTVPTPIDAYKRPDLTPLIKASETVGSVLKKGDIVIYESTVYPGATEEDCVPVLERVSGLTFNQDFFCGYSPERINPGDKEHRLPNIKKVTSGSTPEVAEKVDALYAEIITAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNKMDIDTQAVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPQVILAGRRINDGMGAYVAGQMMKAMIRKGITIKGARLLILGLTFKENCPDLRNTRVVDVVSELREYGIDVDVHDPWVDAEEAMHEYGISLTETPEAGAYDGVILAVAHETFRERGMSFLRDMGRDTHVLYDLKSVFSPGECDLRL
SIO_010081: CBW24_RS17965
subclass of: SO_0000673
so part of: CBW24_RS17965
location: 2062..3336
location: region:2062-3336:1
so has part: feature:2062-3336:1:exon

WP_097374618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2062-3336:1:exon

CBW24_RS17970
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17970
old locus tag: CBW24_17940
so part of: sequence
location: 3422..4297
location: region:3422-4297:1
so has part: feature:3422-4297:1:exon
subclass of: SO_0000010

position:3422:1
position: 3422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4297:1
position: 4297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3422-4297:1:exon

CBW24_RS17970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17970
old locus tag: CBW24_17940
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF024917.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTVVASMDLGSETEKQKILELQQHAFGDFSGPLFDHILRDTPRGAVGYGIHDDGRLVAFNAFMGHSVHRAGQTGIAYQSCMSATHKGHGGRGYFSKIIKHAQQDLKTRGGAFIFGFPNHNSGPIFVKKLGFTLSENQPCVFLRNPLGLLGQIDGGMLLEQMVPDTSVTFDMRETAAWKSGQDDSFFELDHLTNYLFGKVQRKTIKGVPLRLMIIGGYEINKPHQFGTLIARAMKQVGAQFARTNANAHGPLARASGLRRSTAKTEPTIAFPLNWDVEAQFVEACGGIKDVY
SIO_010081: CBW24_RS17970
subclass of: SO_0000673
so part of: CBW24_RS17970
location: 3422..4297
location: region:3422-4297:1
so has part: feature:3422-4297:1:exon

WP_097374619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3422-4297:1:exon

CBW24_RS17975
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17975
old locus tag: CBW24_17945
so part of: sequence
location: 4287..5141
location: region:4287-5141:1
so has part: feature:4287-5141:1:exon
subclass of: SO_0000010

position:4287:1
position: 4287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5141:1
position: 5141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4287-5141:1:exon

CBW24_RS17975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17975
old locus tag: CBW24_17945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIKRRLAHLHDLARLGLTGQASASRISLVPVFHVEKLYNDAYHKALRSFLKGYRDMTGKRAVITCMTPLSPILAAQMQEASFSTKRYWDRIAEAAENGIVGLHGHFLRTTVDQGLRPMHHAFHDLDVIRGQIGQELDALRLHGHMDEDRMIYSGGWWFMTPGLRGVLSEFGFHWDYSLSSSRYNISPGSIAVERQEQSGNASGGHQIRSDTAVSGLARPGRPFQAIGKLLAEPSAEIASTKRVSLYSHDYDLNLAPALHMIERFCKAGFGFHEPEPKSQWDAT
SIO_010081: CBW24_RS17975
subclass of: SO_0000673
so part of: CBW24_RS17975
location: 4287..5141
location: region:4287-5141:1
so has part: feature:4287-5141:1:exon

WP_157773275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4287-5141:1:exon

CBW24_RS17980
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17980
old locus tag: CBW24_17950
so part of: sequence
location: 5232..6158
location: region:5232-6158:1
so has part: feature:5232-6158:1:exon
subclass of: SO_0000010

position:5232:1
position: 5232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6158:1
position: 6158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5232-6158:1:exon

CBW24_RS17980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17980
old locus tag: CBW24_17950
inference: COORDINATES: protein motif:HMM:NF012888.2
GO function: GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase domain-containing protein
translation: MKPTFYIIGAPKCGTTSWAAYLAQHPDVQISDPKELNYFSTDLRTANNIIVGSDTEYEAKFDRPETVPAAGEATPLYLYSTEAIPRIAEYTPDAKIVILLRKAAPFFRSLHQQFLYRRIENETDPRKAWEGSGTRQPHGNADRAALERHLDYKALGDFNSQVARVLEHFPPEQVFITWMEDWKNDPNWLYRELATFLGIDGSHPLTFEVHNRAKRHRNAILSRMTIRPPAWVMALSRGLKRLLGRERLGIAAKLREMNTTYDVAEKLPTDLEAEINEFYRDSYEALDSRSAAFGILRRPSYANENRGA
SIO_010081: CBW24_RS17980
subclass of: SO_0000673
so part of: CBW24_RS17980
location: 5232..6158
location: region:5232-6158:1
so has part: feature:5232-6158:1:exon

WP_097374621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5232-6158:1:exon

CBW24_RS17985
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbF
locus tag: CBW24_RS17985
old locus tag: CBW24_17955
so part of: sequence
location: 6206..6988
location: region:6206-6988:1
so has part: feature:6206-6988:1:exon
subclass of: SO_0000010

position:6206:1
position: 6206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6988:1
position: 6988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6206-6988:1:exon

CBW24_RS17985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbF
locus tag: CBW24_RS17985
old locus tag: CBW24_17955
EC number: 2.7.7.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014385164.1
GO function: GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate cytidylyltransferase
translation: MKTVILAGGLGTRLSEETTTRPKPMVEIGGFPILWHIMKIYASHGLRDFIVCCGYKSYVIKEYFANYARHVSDLRIDMRKNSIEFLNNKAEDWTVTLVETGHNTMTGGRLKRIRDYIGDDDAFCFTYGDGVSNVNITEEIAFHKAHGKLATVTAVEPTARYGTLGLQGSEVVKFMEKPSEGAGWINGGFFVLSPKVFDFIEGDDTSWEVEPLTEITRVGQLEAYLHRGFWQSMDTLRDRTMLEKMWASGQAPWRSWSSPS
SIO_010081: CBW24_RS17985
subclass of: SO_0000673
so part of: CBW24_RS17985
location: 6206..6988
location: region:6206-6988:1
so has part: feature:6206-6988:1:exon

WP_097374622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6206-6988:1:exon

CBW24_RS17990
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbG
locus tag: CBW24_RS17990
old locus tag: CBW24_17960
so part of: sequence
location: 6985..8052
location: region:6985-8052:1
so has part: feature:6985-8052:1:exon
subclass of: SO_0000010

position:6985:1
position: 6985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8052:1
position: 8052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6985-8052:1:exon

CBW24_RS17990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbG
locus tag: CBW24_RS17990
old locus tag: CBW24_17960
EC number: 4.2.1.45
inference: COORDINATES: protein motif:HMM:TIGR02622.1
GO function: GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glucose 4,6-dehydratase
translation: MIDFWSGKRVLVTGHTGFKGSWLSLWLSELGADLYGIALAPEDGALFEMLDLPSRMAHSVLDIREARQLHARVAEIDPDIVFHLAAQPLVIDGYLRPLETFDTNVMGTANLLNALRDAGKRRAIVCVTTDKVYRNREWEFGYREDDTLGGHDPYSASKAAAELIAASYGGSYFYGDSPVRMATARAGNVIGGGDMSANRLVPDIARSLSRREALTLRHPTATRPWQHVLDPLGGYIMLAEALYADGERALPTAFNFGPGRDAERTVAQLVQAAGSIWDMHLPVTDVESGFHETERLMLNTDRAAAVLGWTPRWGFEHSVGETMRWYKARFESEAFDAVAFTISQIESFRCEDHTA
SIO_010081: CBW24_RS17990
subclass of: SO_0000673
so part of: CBW24_RS17990
location: 6985..8052
location: region:6985-8052:1
so has part: feature:6985-8052:1:exon

WP_097374623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6985-8052:1:exon

CBW24_RS17995
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS17995
old locus tag: CBW24_17965
so part of: sequence
location: 8033..8584
location: region:8033-8584:1
so has part: feature:8033-8584:1:exon
subclass of: SO_0000010

position:8033:1
position: 8033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8584:1
position: 8584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8033-8584:1:exon

CBW24_RS17995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS17995
old locus tag: CBW24_17965
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014746556.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MKITPLEIPAVHLIELEQRQDERGFFARLSCQTELASAGLSGNWLQVNNSLTAQAGVVRGLHFQRPPSAEVKMVRCARGAIFDVAVDLRKKSPTFGQWIGRTLTAENREMLYIPEGFGHGFQSLAPDSEIIYFNTANYAPELEGGVRHDDPDIGIEWPLPISFTSERDNALPTLRNFEPMQLV
SIO_010081: CBW24_RS17995
subclass of: SO_0000673
so part of: CBW24_RS17995
location: 8033..8584
location: region:8033-8584:1
so has part: feature:8033-8584:1:exon

WP_097374624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8033-8584:1:exon

CBW24_RS18000
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18000
old locus tag: CBW24_17970
so part of: sequence
location: 8626..9735
location: region:8626-9735:1
so has part: feature:8626-9735:1:exon
subclass of: SO_0000010

position:8626:1
position: 8626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9735:1
position: 9735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8626-9735:1:exon

CBW24_RS18000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18000
old locus tag: CBW24_17970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019425160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MTHRVLYTKPSITDREVAYATDAAQNGWGAKCYDYIFKFEDLFKAYLGTEFAIATSSCTGALHMGMHALGIGPGDEVIMADTNWIACPSTVVHLGAKPVFVDIDPASWCISLQAAEAAITPKTKAIVATHLYGNLCDMDALLEIGARHNLPVIEDAAEALGSAWGDVRCGSRGAFGTFSFHGTKTMTTGEGGMFVTNDPELNHKVLTLNNHGRVPGETHQFWSQVAGFKYKISNIQAAIGCAQVERLDELTRRKQEIMQMYRDRLGAENGISLNPEAPGTTNSAWMPSAVLAPELGVTRQDLLDAFAAANIDGRVFFHPVSSMPPFEDQPQNKVAWDIPNRAINLNSYHDMTEEDIDRVVTCVLSCVRR
SIO_010081: CBW24_RS18000
subclass of: SO_0000673
so part of: CBW24_RS18000
location: 8626..9735
location: region:8626-9735:1
so has part: feature:8626-9735:1:exon

WP_097374625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8626-9735:1:exon

CBW24_RS18005
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18005
old locus tag: CBW24_17975
so part of: sequence
location: 9732..10484
location: region:9732-10484:1
so has part: feature:9732-10484:1:exon
subclass of: SO_0000010

position:9732:1
position: 9732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10484:1
position: 10484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9732-10484:1:exon

CBW24_RS18005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18005
old locus tag: CBW24_17975
inference: COORDINATES: protein motif:HMM:NF012360.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transferase
translation: MTSVAHGELIRASAWRAAVQRPAPPGGKVAFIGANNPETARMVRDVQVATGVEFIGYFDNDPDKKGRTFCGLPVFGGFDDLLGCDRTAFGLVNLITRDTKTRHETTRFFAENGFAAADFIHPSINLDGVTLGRGVYLQEGVIVQGGVVLGDNVCVNSGATISHETSLGTSCFVAPGATLAGLVTLEPGVLIGAGASVMPRLSLGTGTTVGAGAVITKDTTERSIMVGVPAVETGKTPDDEAFLPLFLDKM
SIO_010081: CBW24_RS18005
subclass of: SO_0000673
so part of: CBW24_RS18005
location: 9732..10484
location: region:9732-10484:1
so has part: feature:9732-10484:1:exon

WP_157773276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9732-10484:1:exon

CBW24_RS18010
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18010
old locus tag: CBW24_17980
so part of: sequence
location: 10500..11711
location: region:10500-11711:1
so has part: feature:10500-11711:1:exon
subclass of: SO_0000010

position:10500:1
position: 10500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11711:1
position: 11711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10500-11711:1:exon

CBW24_RS18010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18010
old locus tag: CBW24_17980
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MASTAARFSICIPSRNRLEAVKETVQSVLSQDCDSWEIVISDNSTQSRGALAAWVETLEQPEDKIRVIDTGGNLQMDENWESATLPATGDYVLVVADRWRLRNGALQVFSNIIDRFDPDLIFWAGTKPHQFGALFATPGGPPPLKISEVSTNKILGDFLDFRGYETESVYGQAIPRSLNTAYKRVLSDQAREIWGELFRPISPDYTSAMAFLLVGQRCIKIHEMMYTPIKGAGSNFSNTSVLGLGHYLTTFPNCHVWRGLDEDVVFSTVLNDVENTLKVTAEGREWIERINVENALKCMMSELNFKEFNGSLLPVARTREKIYALAAREGLSERQISNIEDYVSRSRHRAVELRRWLRRFGLYDTVRSLNDRLRHAGKKSRISEMIEAENVAARGLDVIALDR
SIO_010081: CBW24_RS18010
subclass of: SO_0000673
so part of: CBW24_RS18010
location: 10500..11711
location: region:10500-11711:1
so has part: feature:10500-11711:1:exon

WP_097374627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10500-11711:1:exon

CBW24_RS18015
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18015
old locus tag: CBW24_17985
so part of: sequence
location: 11776..13743
location: region:11776-13743:1
so has part: feature:11776-13743:1:exon
subclass of: SO_0000010

position:11776:1
position: 11776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13743:1
position: 13743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11776-13743:1:exon

CBW24_RS18015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18015
old locus tag: CBW24_17985
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF013884.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase family protein
translation: MSKFIEYRADIDGLRAVAVVAVVLFHAEIVLGPVVFSGGFLGVDVFFVISGFLITSLLHRELRETGRVSIARFYGRRVRRIAPALISTCVFTIVAAQFFLLPHELERFNLSLLATLGFVANIFFWSEIGYFSAAADQQPLLHMWSLAVEEQYYVVFPLALWACVRWLGWRATVILIVVSVLGSATLHAWGAVAMRSASFYLTPFRVWELLAGALLAIAGSRWAIRMPAVRTGLGVIGAGLVVVPMVTFDPLAAPSVFPVTLAAVVGTCMIILAGPHSAVGKLLSLRPVVGIGLISFSLYLLHQPILAFARVRSLEHPSEMLMTSLAVLCLPLAYLSWRFVETPFRSRDRVGPRAFYGSVTASSLLIVAVGLGGIQASFGQRWNSDILAVVDSVNAPTNGLSAICHGDLTSPECATDEAARVALWGDSYIMHLVPGLVERGVSFRQLTRRGCRPTALEEIRPPDAGVLTSTERRCEKFNAEVLALIAEEAAAGRLDQVLISSRAYGLRAGSLKKTPTEENWPPEQVAGELGFILSQLEQTGVSVGLVGAPPPAQFDPGQCYIRSVAYDDSSSDCTWPFPEEHGTYPLAEVAEQYGARFLDLSEILCPGGLCAAAQDGTLIYRDNGHLTPRGSEYVFQSDTARRFLDDLGITGGALQ
SIO_010081: CBW24_RS18015
subclass of: SO_0000673
so part of: CBW24_RS18015
location: 11776..13743
location: region:11776-13743:1
so has part: feature:11776-13743:1:exon

WP_097374628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11776-13743:1:exon

CBW24_RS18020
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18020
old locus tag: CBW24_17990
so part of: sequence
location: 13740..15233
location: region:13740-15233:1
so has part: feature:13740-15233:1:exon
subclass of: SO_0000010

position:13740:1
position: 13740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15233:1
position: 15233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13740-15233:1:exon

CBW24_RS18020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18020
old locus tag: CBW24_17990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: oligosaccharide flippase family protein
translation: MSSLGRALAGFMSSSLFGSATQVVKGKVSAIFLGAAGVGVFNQLTLFYTLSMTLASLGLRNGVTRNVAAAQADAGQANAATEGVLRQFSSAFLLVAAVSLLVTAVSVLASDRVSDLLFDDGGERRQLIVLVALAVPIGVAGLIYRALLNGLRVVGPLVRARMIADGSSVIVFAALVIPFGIVGAALGFIFLQAAFLVLVFRTTWTVAPSLAIPRPEAFEFAEARKNFVFGAHSVIVGVTGLGASLFISRLIISTLDLEANGYYVVAVKIATVYLGGLYAAASGYFLSSVVKAAAEKTVGKTIDEAVRLYLAVVAPVIVVLMASGEIFVVAFFSVEFLPVAVILLLLLPGDAVRLVAETMGQALIAQRKLVSSCIVFAVWAAIYCAGAILLLPRFGLLGLAVAYTASQLLLLGVLLVVCRRLLDYAPCRQTIYTVLRAMLLVTSASAACWYVESLVTKMLVCAALVLAWGAVSMRDPFFAGAITKLWRVIRARFMPSR
SIO_010081: CBW24_RS18020
subclass of: SO_0000673
so part of: CBW24_RS18020
location: 13740..15233
location: region:13740-15233:1
so has part: feature:13740-15233:1:exon

WP_097374629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13740-15233:1:exon

CBW24_RS18025
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18025
old locus tag: CBW24_17995
so part of: sequence
location: 15347..16441
location: region:15347-16441:1
so has part: feature:15347-16441:1:exon
subclass of: SO_0000010

position:15347:1
position: 15347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16441:1
position: 16441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15347-16441:1:exon

CBW24_RS18025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18025
old locus tag: CBW24_17995
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MKLLHVIETLNTGGAERLLVTMLPELASQGMEVHVAVMRPPMPLKPELEAAGIRVHVLPRRGKWHVMRQARDLARLAQSLQAEIVHAHLYFPILVTAMARGLGWLDAATHASFHNLAYAGANRKTWKLEARRRLAGFVVRRGIDQPQAVSQFSADHYAATYRLDNIAVLHNAFDPESLSGIERKAGDSIVIPGRLVHEKGHADLIAALKQLQQDCPPVTFAGDGPLREVLEAAIKAAQLPISITGQLDHARMLKTIASARLVVVPSRFEGFGLTALEALALGKAVVATNVGGLPEVMGALGQKVRPGQPVELAEAMEAALSDPDWIAAQEVSGPEQAAKFAVATIAKKQIAQYQKTDRAKGLRT
SIO_010081: CBW24_RS18025
subclass of: SO_0000673
so part of: CBW24_RS18025
location: 15347..16441
location: region:15347-16441:1
so has part: feature:15347-16441:1:exon

WP_097374630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15347-16441:1:exon

CBW24_RS18030
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18030
old locus tag: CBW24_18000
so part of: sequence
location: 16438..17652
location: region:16438-17652:1
so has part: feature:16438-17652:1:exon
subclass of: SO_0000010

position:16438:1
position: 16438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17652:1
position: 17652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16438-17652:1:exon

CBW24_RS18030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18030
old locus tag: CBW24_18000
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MTSVLYISYTGLMDPLGQSQVLQYVLALGRAGHRMTVLSFEKPEALNDPERVAAMRSLCREADVNWRPRIWHNKPVGILATLYDLSAGRRQAIRIAREVGAEVVHCRSYIASLMGLAVKRATGAKLIFDMRGFWPDERVDGGIWSKASAPYRVFKRVERSLFLNADHIVSLTKAGVREYEAFDYMKDEPPKSTVIPTCTNLDMFRPETAPREAFTLGYVGSVGSWYLFDDVAKAVARTFALRPDARFLVVTKGNHDLVRKALDKAGADPERIQVLSVDFSEVGRHIGRMDAGIFFIRPAWSKRASCPTRMGEFLASGKPCLANGGVGDVAEDIRETGTGIALPQLGTQSVDLTDLDEALQTLFAMAEDPEMPARCRAVAEERFSLASGVAAYSDIYRQLSEDPT
SIO_010081: CBW24_RS18030
subclass of: SO_0000673
so part of: CBW24_RS18030
location: 16438..17652
location: region:16438-17652:1
so has part: feature:16438-17652:1:exon

WP_097374631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16438-17652:1:exon

CBW24_RS18035
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18035
old locus tag: CBW24_18005
so part of: sequence
location: 17658..18743
location: region:17658-18743:1
so has part: feature:17658-18743:1:exon
subclass of: SO_0000010

position:17658:1
position: 17658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18743:1
position: 18743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17658-18743:1:exon

CBW24_RS18035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18035
old locus tag: CBW24_18005
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024914.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MLFLTRYPVEGASSRYRVFQYLPHLEAQGVRADVQSFMDEPMYQLSLAPGRTGSKIAATLKATFRRLWALRRWRQYDAIYLQRELLPFGPPLVEAALKKRGAVLFFDYDDALFIKKASRYTRLATALRSADKTRDLFRLVHCVVAGNDWLRDVAREAGAERSITLEVAEDTRRIPMHAPHSNDARVTIGWLGSPSTVKYLRVIEPVLQRLAQRYPRVRWEIMGGSDFKMEGVDWQLNDWSLDREVAALGRFDIGLMPLPPEDWAKGKSGGKARTYMAAGIVPVVSAIGYNLELIRHAETGFLCTTPQDWETHLVRVIEDADLRQRIASSARAEVEQRFDPAVIAAQMAEMLKDVVDDVKNR
SIO_010081: CBW24_RS18035
subclass of: SO_0000673
so part of: CBW24_RS18035
location: 17658..18743
location: region:17658-18743:1
so has part: feature:17658-18743:1:exon

WP_232530376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17658-18743:1:exon

CBW24_RS18040
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18040
old locus tag: CBW24_18010
so part of: sequence
location: 18727..19923
location: region:18727-19923:1
so has part: feature:18727-19923:1:exon
subclass of: SO_0000010

position:18727:1
position: 18727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19923:1
position: 19923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18727-19923:1:exon

CBW24_RS18040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18040
old locus tag: CBW24_18010
inference: COORDINATES: protein motif:HMM:NF014805.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKTADVIVLGLSPTGLYAVREAARAGYAVLGVGAPGAPGLWSRLLADRIAAETPQARVAAILERTETGGGEKPVLVVTSDQDLEEVIARWDALSGRVQLQGSYTDGLASRIMDKDSFYKDCAAQGVAYPSLWSAPVAEAGQYRDKIPYPAMIKPARIQDVKHLMAGQKGWIVRNKSEFDDVLPGIPQEAGTLLMQEIVPGPESNITLWCGFFDRDGQVRQRFTARKLRQYPAGFGSASLVQSETCLETAEAAETLLSSLGYRGIAAAEFKRHPESGALKIIEVNPRPSLWFSVATKAGVPLVETAVAEARGDPLPAMARQKDGVLWRYTTKDLASRLFYARNRDFVLPAPEPARKARVTARADVTGAWDDPAPALGDLIGFAGKLATRISAKARGRS
SIO_010081: CBW24_RS18040
subclass of: SO_0000673
so part of: CBW24_RS18040
location: 18727..19923
location: region:18727-19923:1
so has part: feature:18727-19923:1:exon

WP_097374633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18727-19923:1:exon

CBW24_RS18045
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18045
old locus tag: CBW24_18015
so part of: sequence
location: 19920..20882
location: region:19920-20882:1
so has part: feature:19920-20882:1:exon
subclass of: SO_0000010

position:19920:1
position: 19920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20882:1
position: 20882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19920-20882:1:exon

CBW24_RS18045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18045
old locus tag: CBW24_18015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGSFVVSLDFELMWGVRDHRSVQNYGDAVLGGRKAIPTMLARFEAAGVRATWATVGLLFARNRDEMLSFAPGTRPAYEDPGLSPYADIENRLIGENEQADPMHFGASLIDRIADTPGQELATHTYSHYYCLEPGADTDSFEADLAAAAAIAGHSGHKLQSIVYPRNQMSDAFIERGAGQGITAYRGDARSWLYRPRSGAESTRLFRLARFIDGALPLGPKQVVQPDRDGQGWNVPASRFLRPWSKKLAFYHALHIQRIETEMELAARQGRCYHLWWHPHNFGRNTTENLVGLDRVIACFKRCRDDFGMVSRTMHDFTVL
SIO_010081: CBW24_RS18045
subclass of: SO_0000673
so part of: CBW24_RS18045
location: 19920..20882
location: region:19920-20882:1
so has part: feature:19920-20882:1:exon

WP_097374634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19920-20882:1:exon

CBW24_RS18050
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18050
old locus tag: CBW24_18020
so part of: sequence
location: 20905..21939
location: region:20905-21939:1
so has part: feature:20905-21939:1:exon
subclass of: SO_0000010

position:20905:1
position: 20905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21939:1
position: 21939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20905-21939:1:exon

CBW24_RS18050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18050
old locus tag: CBW24_18020
inference: COORDINATES: protein motif:HMM:NF026247.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EpsG family protein
translation: MLVYLGIYSGFALSAVGSYPRRNAVFFIVTGIFLVWFMGFRYETGCDYFGYLNRWVQFYPPSSLNQLLEGEEVGFALLMGSVQSLGLNYTWLNVAASAILVACYVRFATAHSFARLILALLFPVIIVQLGMSGIRQAIAGGFLMLAFNAFAKSERLWTAFWILIGMQFHASVIIFLPIALIAGRQINTLRLAASLAILGPVAGLLLADRFDTYDDRYIEGTVTSGGAIIRYALVLLPVPFFMTYRARVRNNFPDMYPLLKMAALMILALAPLTVLSSIALHRLNYYVMPLSILLLVYVGAVAFKNARQGHILATGVYGAYSLFWFLGSSHAQSCYLPYESTWFL
SIO_010081: CBW24_RS18050
subclass of: SO_0000673
so part of: CBW24_RS18050
location: 20905..21939
location: region:20905-21939:1
so has part: feature:20905-21939:1:exon

WP_157773277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20905-21939:1:exon

CBW24_RS18055
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS18055
old locus tag: CBW24_18025
so part of: sequence
location: 22020..22592
location: region:22020-22592:1
so has part: feature:22020-22592:1:exon
subclass of: SO_0000010

position:22020:1
position: 22020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22592:1
position: 22592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22020-22592:1:exon

CBW24_RS18055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS18055
old locus tag: CBW24_18025
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020041597.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MNVSQTRLTGLLLIEPRRFGDHRGFFAETYNRQAYEAHGITTDWVQDNHSLSATPGTLRGLHFQAPPYAQAKLVRCGRGRLFDVVADLRRGSPTFGQWEGFELSAENGHQVLIPVGFAHGFVTREPDTEIVYKCSDYYAPETEGAVVWDDPDVGVDWGLEGAEPILSEKDRAAPRLKDFETPFTYEKAAP
SIO_010081: CBW24_RS18055
subclass of: SO_0000673
so part of: CBW24_RS18055
location: 22020..22592
location: region:22020-22592:1
so has part: feature:22020-22592:1:exon

WP_097374636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22020-22592:1:exon

CBW24_RS18060
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbB
locus tag: CBW24_RS18060
old locus tag: CBW24_18030
so part of: sequence
location: 22589..23629
location: region:22589-23629:1
so has part: feature:22589-23629:1:exon
subclass of: SO_0000010

position:22589:1
position: 22589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23629:1
position: 23629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22589-23629:1:exon

CBW24_RS18060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbB
locus tag: CBW24_RS18060
old locus tag: CBW24_18030
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005854457.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKILITGGAGFIGSAVVRQAVGAGHEVVNLDALTYAANLESLASVTDNPLYTFEQADIRDRPVLDRIFADHRPDAVMHLAAESHVDRSIDGPALFIETNVTGTFTLLEAARGYWQDAGKPERFRFHHISTDEVYGSLGPTGKFTEDTPYDPRSPYSASKASSDHLVRAWGETYGLPVLVTNCSNNYGPYHFPEKLIPVVILRALAGEQIPVYGDGSNVRDWLYVEDHADALLTVLRAGQVGRTYNIGGENEATNIDLVRMICAELDRLRPETAPHERHITFVADRPGHDQRYAIDPTRIREELGWRPSVTVDEGIARTVRWYLDNETWWRPLLDRDGVGQRLGTKA
SIO_010081: CBW24_RS18060
subclass of: SO_0000673
so part of: CBW24_RS18060
location: 22589..23629
location: region:22589-23629:1
so has part: feature:22589-23629:1:exon

WP_097374637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22589-23629:1:exon

CBW24_RS18065
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbD
locus tag: CBW24_RS18065
old locus tag: CBW24_18035
so part of: sequence
location: 23626..24483
location: region:23626-24483:1
so has part: feature:23626-24483:1:exon
subclass of: SO_0000010

position:23626:1
position: 23626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24483:1
position: 24483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23626-24483:1:exon

CBW24_RS18065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbD
locus tag: CBW24_RS18065
old locus tag: CBW24_18035
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008281614.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MRDLLIFGATGQVARELARLVPEARFLDRAAVDLSDAEACRSAVLDSGARRIINAAAYTAVDKAESEPDLAHAINATAPGIMAKAAREIDASFVHISTDYVFDGSGNGPWAPSDTPTPLGMYGRTKLAGERAVTAAGGRRAILRTSWVFSAHGQNFVKTMLRLSETRDALNVVDDQIGGPTSAASIARAVLTISEQLHDGTAPSGIYHFSGAPDTNWAGFAQAIFAAASRNVAVTPIPSREYPTPAPRPLNSRLDCALTEQTFGIARSDWRDDLNQTLHELGARD
SIO_010081: CBW24_RS18065
subclass of: SO_0000673
so part of: CBW24_RS18065
location: 23626..24483
location: region:23626-24483:1
so has part: feature:23626-24483:1:exon

WP_097374638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23626-24483:1:exon

CBW24_RS18070
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbA
locus tag: CBW24_RS18070
old locus tag: CBW24_18040
so part of: sequence
location: 24540..25361
location: region:24540-25361:1
so has part: feature:24540-25361:1:exon
subclass of: SO_0000010

position:24540:1
position: 24540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25361:1
position: 25361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24540-25361:1:exon

CBW24_RS18070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbA
locus tag: CBW24_RS18070
old locus tag: CBW24_18040
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018302619.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MGISKQLLPIYDKPMIYYPLSVLMLTGIREIAIITTPQDQDQFKRLMGDGSQWGLSFTYIEQPAPEGLAQAYLLAKDFLAGAPSTLVLGDNIFFGHGLPEQLAAANARETGGTIFGYRVTDPERYGVVDFAPDGTARQIVEKPQNPPSRHAVTGLYFLDGSAPERAAKVKPSARGELEITDLLQQYLDEGLLAVEALGRGHAWLDTGTHGSLLDAANFVRTLTERQGQQVGSPDEIAHRMGFIDGPALADRAKLFGKNAYGRYLGEVASEKSE
SIO_010081: CBW24_RS18070
subclass of: SO_0000673
so part of: CBW24_RS18070
location: 24540..25361
location: region:24540-25361:1
so has part: feature:24540-25361:1:exon

WP_232530377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24540-25361:1:exon

CBW24_RS18075
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18075
old locus tag: CBW24_18045
so part of: sequence
location: complement(25523..26302)
location: region:25523-26302:-1
so has part: feature:25523-26302:-1:exon
subclass of: SO_0000010

position:25523:-1
position: 25523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26302:-1
position: 26302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25523-26302:-1:exon

CBW24_RS18075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18075
old locus tag: CBW24_18045
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF024784.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MSDPLSDSGGRQRLVVHPSIPRTHVAAVTLEILKATMFSGLIPFNSELGLDRGCEVRDVEYVKNLLESEYETEREHERPYPSLDTVVHEQEFSFEDGVVAGEVPFGSENRDGHQYLSFKSGDKSIYTHRFIVSYALGKWMPRECDVDHINHNPTDNRPSNLRIVTPRDNAGNRRKALLSELVDLDAVKEKQRDPSPAVVVVTDPEPHPKVLTSSGLNSEVRYTGETKPADHAGPYGGMWYKTNLESWHLLFEPPAELRR
SIO_010081: CBW24_RS18075
subclass of: SO_0000673
so part of: CBW24_RS18075
location: complement(25523..26302)
location: region:25523-26302:-1
so has part: feature:25523-26302:-1:exon

WP_157773278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25523-26302:-1:exon

CBW24_RS18080
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18080
old locus tag: CBW24_18050
so part of: sequence
location: 26451..27050
location: region:26451-27050:1
so has part: feature:26451-27050:1:exon
subclass of: SO_0000010

position:26451:1
position: 26451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27050:1
position: 27050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26451-27050:1:exon

CBW24_RS18080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18080
old locus tag: CBW24_18050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSETRIGYARCSTDKQDLAAQTVALLDLHVAADRIYTDHGLTGTNRERPGLAQALAAVRAGDTLVVPKLDRLARSVPDARAIADELAGRGVKLALGASVYDPADPMGKMFFNILATFAEFEADLIRMRTKEGMAVARAKGKLKGKKPKLSDRRQTELRRMYDTGDYSISDLAEVFDVSRPTVYRVLQRTPSADAPTGTA
SIO_010081: CBW24_RS18080
subclass of: SO_0000673
so part of: CBW24_RS18080
location: 26451..27050
location: region:26451-27050:1
so has part: feature:26451-27050:1:exon

WP_097374641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26451-27050:1:exon

CBW24_RS18085
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18085
old locus tag: CBW24_18055
so part of: sequence
location: complement(27067..27957)
location: region:27067-27957:-1
so has part: feature:27067-27957:-1:exon
subclass of: SO_0000010

position:27067:-1
position: 27067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27957:-1
position: 27957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27067-27957:-1:exon

CBW24_RS18085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18085
old locus tag: CBW24_18055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009805870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MSDENGLPPLNGLRAFAVAGRHLSFRAAADELGVTQGAVAQQVRGLEGHLGLRLFLREPRGLAFTEEGRAYHAAVSRAFSQLSEATAALRSAPLQVTISVTPTFASKWLIPRLAEFTQAHPDIDLRITATERVSSFHADGIDLAVRQGRPPFGASLRADLLFPQEVIAVCSPSLVAQEPLPLGAAALTRMTLLHDTHDLWPKFIENAFGGMIQQPRGLRFNQTTLSLDAALAGQGIALASRFLVARDIAGDRLVQPIDSALEGELNFYLLTPRQDASDATLHVRNWLLSQKIDLAA
SIO_010081: CBW24_RS18085
subclass of: SO_0000673
so part of: CBW24_RS18085
location: complement(27067..27957)
location: region:27067-27957:-1
so has part: feature:27067-27957:-1:exon

WP_097374642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27067-27957:-1:exon

CBW24_RS18090
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18090
old locus tag: CBW24_18060
so part of: sequence
location: 28074..28778
location: region:28074-28778:1
so has part: feature:28074-28778:1:exon
subclass of: SO_0000010

position:28074:1
position: 28074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28778:1
position: 28778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28074-28778:1:exon

CBW24_RS18090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18090
old locus tag: CBW24_18060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017277230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTAEKVALITAGGSGMGAGAARRLAADGYKVGILSSSGKGEALATTLGGFGVTGSNQSVEDLGRLVDGAMERWGRVDVLVNSAGHGPKGAILEITDEDWHSGLDVYLLNVIRPTRLVTPIMAAQGGGAIINISTFAAFEPDPLFPTSGIFRAGLAGFAKLYADMYAAQNIRMNNVLPGFINSLPETEDRRTRIPMGRYGKEEEVSSLISWLASDGGGYVTGQNWRIDGGLTRGV
SIO_010081: CBW24_RS18090
subclass of: SO_0000673
so part of: CBW24_RS18090
location: 28074..28778
location: region:28074-28778:1
so has part: feature:28074-28778:1:exon

WP_097374643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28074-28778:1:exon

CBW24_RS18095
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18095
old locus tag: CBW24_18065
so part of: sequence
location: 28768..29016
location: region:28768-29016:1
so has part: feature:28768-29016:1:exon
subclass of: SO_0000010

position:28768:1
position: 28768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29016:1
position: 29016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28768-29016:1:exon

CBW24_RS18095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18095
old locus tag: CBW24_18065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009805868.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinone biosynthesis methyltransferase UbiE
translation: MASETTNAPDRGQTAFAVKWVASIIQILGYAATGFGWAPWNLYLFLAGVLGWLIVGVLWNDRAIMLIHFVALGSMLVGMASQ
SIO_010081: CBW24_RS18095
subclass of: SO_0000673
so part of: CBW24_RS18095
location: 28768..29016
location: region:28768-29016:1
so has part: feature:28768-29016:1:exon

WP_097374644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28768-29016:1:exon

CBW24_RS18105
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18105
old locus tag: CBW24_18075
so part of: sequence
location: complement(29287..29832)
location: region:29287-29832:-1
so has part: feature:29287-29832:-1:exon
subclass of: SO_0000010

position:29287:-1
position: 29287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29832:-1
position: 29832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29287-29832:-1:exon

CBW24_RS18105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18105
old locus tag: CBW24_18075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010139717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaeQ family protein
translation: MAQKSTIYKIELSVSDMDRQYYETHRLTVARHPSETDERLMVRIVAFALNAHEHLELGKGLSTDDEPDIWQKSLSGEIDVWVALGLPSEKVIRQSCNKAAKVVIYPYGGRTAELWWDKTKNSTNRFDNLHVVNLAEGDTAALAKLASRTMKLQVNIQDGEVMVSIEDAAIYLTPETWKGAA
SIO_010081: CBW24_RS18105
subclass of: SO_0000673
so part of: CBW24_RS18105
location: complement(29287..29832)
location: region:29287-29832:-1
so has part: feature:29287-29832:-1:exon

WP_097374645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29287-29832:-1:exon

CBW24_RS18110
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18110
old locus tag: CBW24_18080
so part of: sequence
location: complement(30110..30268)
location: region:30110-30268:-1
so has part: feature:30110-30268:-1:exon
subclass of: SO_0000010

position:30110:-1
position: 30110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30268:-1
position: 30268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30110-30268:-1:exon

CBW24_RS18110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18110
old locus tag: CBW24_18080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017929876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaE/Pmp3 family membrane protein
translation: MDIIRIIIAILLPPLGVFLQEGLGKHFWINIILTILGYVPGIIHAIYIIIKK
SIO_010081: CBW24_RS18110
subclass of: SO_0000673
so part of: CBW24_RS18110
location: complement(30110..30268)
location: region:30110-30268:-1
so has part: feature:30110-30268:-1:exon

WP_088663901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30110-30268:-1:exon

CBW24_RS18115
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18115
old locus tag: CBW24_18085
so part of: sequence
location: 31833..32981
location: region:31833-32981:1
so has part: feature:31833-32981:1:exon
subclass of: SO_0000010

position:31833:1
position: 31833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32981:1
position: 32981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31833-32981:1:exon

CBW24_RS18115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18115
old locus tag: CBW24_18085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNHVEGWDSLRSLLSDLRGATADNITLMRLLNRVKYNIDSMRQDAREGVPKNLAKLFKGKLTKAQWEGMHYGIGKTDILALGMVEAQALLEDPSSVGARILAAEEVLQKHAAPLADRYKTKARVLARYMVRGEVTSQNLLKNARAIAGLFGEVDRPKPENIDERVEPAIEKLIALYAYELLPQSEQEMLQDLAENQAEGLKAVLGMTETLRKLEEEKLTQVQTDDLAVNQALNNGWAGFLPEQTADGAQVVVKDISEHEHMISRGWVRIGAYNGDGNEGYRGKRAYYQSSVAGKSPFRQGLAQSVHSTFRGTNVMTGRSLTGMAGTITGKKAEALAQAISEAKAGSLDNVPNGEYLIPFFDGKGNVIPKQKSNGFSASTVLH
SIO_010081: CBW24_RS18115
subclass of: SO_0000673
so part of: CBW24_RS18115
location: 31833..32981
location: region:31833-32981:1
so has part: feature:31833-32981:1:exon

WP_097374646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31833-32981:1:exon

CBW24_RS18120
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18120
old locus tag: CBW24_18090
so part of: sequence
location: 33649..34737
location: region:33649-34737:1
so has part: feature:33649-34737:1:exon
subclass of: SO_0000010

position:33649:1
position: 33649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34737:1
position: 34737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33649-34737:1:exon

CBW24_RS18120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18120
old locus tag: CBW24_18090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010505209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MVTKTPNLFDHADATSVAKPLDPLLPDRHPQHDLFICDVADAVLKDMMAHMEHPFYSLSKKPETNIRRYEHNGNWIEITPSVKGLATIYDKDILIYCISQIMAKLKDGQPVSPRVRINTRDLLVFTNRGTAGKDYAALAEALARLAGTRISTNIQTADEEQYDTFGLIDTASIRRKHGLDGRLLWCEVKLSEWVFNAIRSHEVLTLHRDYFRLRKPIERRVYEIARKHCGSQKEWKVGVPTLLKKTGSQSPLKRFREMIRDLVAFDHLPDYSVSFEAETDMVTFLNRGTMTSEAIEMPPALFTPLDPETFAKVKEVAPGWDVYHLEQEWRAWMMDGGLDAPANPDKAFLGFCRKFFEKRGRP
SIO_010081: CBW24_RS18120
subclass of: SO_0000673
so part of: CBW24_RS18120
location: 33649..34737
location: region:33649-34737:1
so has part: feature:33649-34737:1:exon

WP_097374647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33649-34737:1:exon

CBW24_RS18125
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18125
old locus tag: CBW24_18095
so part of: sequence
location: complement(34911..35951)
location: region:34911-35951:-1
so has part: feature:34911-35951:-1:exon
subclass of: SO_0000010

position:34911:-1
position: 34911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35951:-1
position: 35951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34911-35951:-1:exon

CBW24_RS18125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18125
old locus tag: CBW24_18095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007331490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MVGDNTNSRSPLLPDRMQQADFFVCDIFDAAPKGDMASMEHPIFSISTKPDRRIRRYENGTSFVEITPSMKGLATVHDRDVLIYCISQCIAALNEEREVSPTIRFRAYDLLKATNRGTDGRGYEQLKAALERLQGTVVTTNLITGGKEEFDGFGLIDRFKIVRETRDGRMQEVEIRLSDWVFNAIRHREVLTLHRDYFRLRKPLERRIYELARKHCGAKQEWKISLAKLQAKCGSCSTSKEFRRLVMSIVRQDGQHAHMPDYAVRVEDDMVIFTNRRSDQGRSTHPSVSQIRLDPEAYHDARTAAPGWDVYVLEQEWRNWMTEPPRDPNAAFIGFCKKVFEKRGPP
SIO_010081: CBW24_RS18125
subclass of: SO_0000673
so part of: CBW24_RS18125
location: complement(34911..35951)
location: region:34911-35951:-1
so has part: feature:34911-35951:-1:exon

WP_097374648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34911-35951:-1:exon

CBW24_RS18130
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18130
old locus tag: CBW24_18100
so part of: sequence
location: 36441..37082
location: region:36441-37082:1
so has part: feature:36441-37082:1:exon
subclass of: SO_0000010

position:36441:1
position: 36441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37082:1
position: 37082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36441-37082:1:exon

CBW24_RS18130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18130
old locus tag: CBW24_18100
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIISLISQKGGVGKSALARLLAVEVARAGWAVKIADLDPAQGTSTKWKARRDQAELHPEVAVEKYRTVDRAIKEAERFDLMILDGPAHAEQGGRVMAQNSDLVLMPTGYSLDDMEPQIEAAYELEDAGVPSDRIFFCFCRAKGSDAEDRAARTYLGKARMNVLEPTFPELASIRQGHAEGRAASEVPFPKVQAKAIAVAQAIMNRLPGVKEAA
SIO_010081: CBW24_RS18130
subclass of: SO_0000673
so part of: CBW24_RS18130
location: 36441..37082
location: region:36441-37082:1
so has part: feature:36441-37082:1:exon

WP_097374649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36441-37082:1:exon

CBW24_RS18135
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18135
old locus tag: CBW24_18105
so part of: sequence
location: 37079..37348
location: region:37079-37348:1
so has part: feature:37079-37348:1:exon
subclass of: SO_0000010

position:37079:1
position: 37079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37348:1
position: 37348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37079-37348:1:exon

CBW24_RS18135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18135
old locus tag: CBW24_18105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMSKGLQIAEPPRRRQSGAGGADTRPEKAKPAPIAKFDHVAEDEKVQFNKRVTRGVADGYEILAIRTRRKVPDLLAEALSLLEEKYGKV
SIO_010081: CBW24_RS18135
subclass of: SO_0000673
so part of: CBW24_RS18135
location: 37079..37348
location: region:37079-37348:1
so has part: feature:37079-37348:1:exon

WP_097374650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37079-37348:1:exon

CBW24_RS18140
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18140
old locus tag: CBW24_18110
so part of: sequence
location: 37589..37662
location: region:37589-37662:1
so has part: feature:37589-37662:1:exon
subclass of: SO_0000663

position:37589:1
position: 37589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37662:1
position: 37662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37589-37662:1:exon

CBW24_RS18140
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1411902
locus tag: CBW24_RS18140
old locus tag: CBW24_18110
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:37621..37623,aa:Cys,seq:gca)
SIO_010081: CBW24_RS18140
subclass of: SO_0000673
so part of: CBW24_RS18140
location: 37589..37662
location: region:37589-37662:1
so has part: feature:37589-37662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37589-37662:1:exon

CBW24_RS18145
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18145
old locus tag: CBW24_18115
so part of: sequence
location: complement(37799..39091)
location: region:37799-39091:-1
so has part: feature:37799-39091:-1:exon
subclass of: SO_0000010

position:37799:-1
position: 37799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39091:-1
position: 39091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37799-39091:-1:exon

CBW24_RS18145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18145
old locus tag: CBW24_18115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014880617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MAKRGRSGTMQVLLNGRLVGALRLAGSGAISFTYDPDWLAWEHAMPISLSLPLREVAHQGGPVIAYLENLLPDNQAIRERVAARVRAGGTDAWHMLEKIGRDCVGALQFVSGEVCEVGALEGEQVSEAQIADMLRNLASAPLGLEEEDDFRISIAGAQEKTALLRHEGAWIRPSGLTPTTHILKTQLGVLPAGIDLSDSVENEYLCMSFCRAMGMDVAEVEIADFEDVRSLVVTRFDRRWTKDGRLIRLPQEDFCQALTVPPSQKYQMDGGPGITEGIGLLAGSDDPELDQRAFFRAQVLFWLLGATDGHAKNFSIALRPGGFRMTPLYDVLSAQKAVDDGQIRQNRMRLAMAVDGHYRINEVVPRHFLQAAKAAGYGVALAEEILSDIATELEPAMDKTVVDLPDGFPQLLAEAIVAGIRGRAATLFAV
SIO_010081: CBW24_RS18145
subclass of: SO_0000673
so part of: CBW24_RS18145
location: complement(37799..39091)
location: region:37799-39091:-1
so has part: feature:37799-39091:-1:exon

WP_097374651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37799-39091:-1:exon

CBW24_RS18150
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18150
old locus tag: CBW24_18120
so part of: sequence
location: complement(39091..39336)
location: region:39091-39336:-1
so has part: feature:39091-39336:-1:exon
subclass of: SO_0000010

position:39336:-1
position: 39336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39091-39336:-1:exon

CBW24_RS18150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18150
old locus tag: CBW24_18120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019641768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDLTARTAEQIGEALRRTRKARGWTQSDISARTNLRVATVSSLENGDAGTKLATVLAVMAALGLEFRLVERGGSLEIEDIF
SIO_010081: CBW24_RS18150
subclass of: SO_0000673
so part of: CBW24_RS18150
location: complement(39091..39336)
location: region:39091-39336:-1
so has part: feature:39091-39336:-1:exon

WP_097374652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39091-39336:-1:exon

CBW24_RS18155
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18155
old locus tag: CBW24_18125
so part of: sequence
location: 39758..40906
location: region:39758-40906:1
so has part: feature:39758-40906:1:exon
subclass of: SO_0000010

position:39758:1
position: 39758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40906:1
position: 40906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39758-40906:1:exon

CBW24_RS18155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18155
old locus tag: CBW24_18125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014075909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MAPNSRSHDHPLHVMLTVNAAWNIWNFRKPILKALLAEGHRVTVLAPLDDSVAKLEKLGCRVLPLQMSAKGLNPLEGLRLRRAFLKAFRQERPDIVFSYTIKNNLFGAMAARRCGVPFLPNVTGLGTAFLSGGALQRVAEGLYRHAFRRLPKVFFQNEDDRTLFLSRRLVRAEQTEVLPGSGIDLQHFNAAPYPEGEEIRFLMIARLLRDKGVHEYIEAARMLKGEGARVRFQILGATGSENRTAISREQVAEWEAEGVIDYLGTAPDVRPHIAEAHCVVLPSYREGAPRTLIEAAAMARPLIATDVPGCTAVVDHGVNGFLCEVRSGDSLAEACRRFLSLGEDARRVMGKAGRAKMAADYDEALIVQAYERAMVQMLGRGF
SIO_010081: CBW24_RS18155
subclass of: SO_0000673
so part of: CBW24_RS18155
location: 39758..40906
location: region:39758-40906:1
so has part: feature:39758-40906:1:exon

WP_232530375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39758-40906:1:exon

CBW24_RS18160
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18160
old locus tag: CBW24_18130
so part of: sequence
location: 40906..41688
location: region:40906-41688:1
so has part: feature:40906-41688:1:exon
subclass of: SO_0000010

position:41688:1
position: 41688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40906-41688:1:exon

CBW24_RS18160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18160
old locus tag: CBW24_18130
inference: COORDINATES: protein motif:HMM:NF014724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcF family protein
translation: MDTAFFVLSKLVSAFLRPDTWIVVALAVILLAFATNKRRLGFWVSGLSFAGLFLLAVLPLGDLLLRPIETRYPAEPELGDMQGIILLGGGENARASAFWGQLQLNEGGERYTAALALTRGFPDAQLVFAGGSGTLRDAAGAEVTEAAMAERFFLSQGINPDRMMFEGQSRNTAENARLSLALAEPAPGANWLLVTSAFHMPRAMRSFERAGWAGLTAWPVDYRTARFGDRIGWNLTRNLDVLAIGIREHVGQVAYRMTGR
SIO_010081: CBW24_RS18160
subclass of: SO_0000673
so part of: CBW24_RS18160
location: 40906..41688
location: region:40906-41688:1
so has part: feature:40906-41688:1:exon

WP_097374654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40906-41688:1:exon

CBW24_RS18165
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18165
old locus tag: CBW24_18135
so part of: sequence
location: 41885..42241
location: region:41885-42241:1
so has part: feature:41885-42241:1:exon
subclass of: SO_0000010

position:41885:1
position: 41885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42241:1
position: 42241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41885-42241:1:exon

CBW24_RS18165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18165
old locus tag: CBW24_18135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019429411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family EPS-associated transcriptional regulator
translation: MTDRRDAMQEDMRFRLLRLLDDSPEMSQRDLARAVGVSLGSVNFQLKALVDKGLVKLGNFSANPDKRRYAYILTPRGIATKASLTRRFLARKRVEYDALRAEIEALQSEIDDVPRQPE
SIO_010081: CBW24_RS18165
subclass of: SO_0000673
so part of: CBW24_RS18165
location: 41885..42241
location: region:41885-42241:1
so has part: feature:41885-42241:1:exon

WP_097374655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41885-42241:1:exon