Pacificitalea manganoxidans strain DY25 plasmid pDY25-D, complete sequence.
type: Entry
definition: Pacificitalea manganoxidans strain DY25 plasmid pDY25-D, complete sequence.
sequence version: NZ_CP021408.1
sequence date: 2022-12-31
sequence: sequence
division: CON
label: NZ_CP021408.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07150770
keyword: RefSeq
source: Pacificitalea manganoxidans
organism: Pacificitalea manganoxidans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pacificitalea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP021408.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.3\nAssembly Name :: CelManDY25\nLong Assembly Name :: Celeribacter manganoxidans DY25\nGenome Coverage :: 100x\nSequencing Technology :: Complete Genomics\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 01:54:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,656\nCDSs (total) :: 3,599\nGenes (coding) :: 3,554\nCDSs (with protein) :: 3,554\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 19 of 45\nPseudo Genes (incomplete) :: 30 of 45\nPseudo Genes (internal stop) :: 5 of 45\nPseudo Genes (multiple problems) :: 8 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 55280
topology: circular
so has quality: SO_0000988
location: 1..55280
location: region:1-55280:1
RO_0002162: 1411902

NZ_CP021408
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07150770
type: BioSample
SIO_000068: biosample

1
title: Comparative genomic and metabolic analysis of manganese-oxidizing mechanisms in Celeribater manganoxidans DY25T: its adaption to the environment of polymetallic nodule
author: Wang, X.
journal: Unpublished

2
title: Direct Submission
author: Wang, X.
journal: Submitted (22-MAY-2017) College of Marine Life Sciences, Ocean University of China, 5 Yushan Road, Qingdao, Shandong 266003, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55280:1
position: 55280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-55280:1:source
so part of: sequence
organism: Pacificitalea manganoxidans
mol type: genomic DNA
strain: DY25
isolation source: sediment
type material: type strain of Celeribacter manganoxidans
plasmid: pDY25-D
country: Pacific Ocean
collection date: 2012-08

1411902
type: Taxonomy
SIO_000068: taxonomy

CBW24_RS17510
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17510
old locus tag: CBW24_17480
so part of: sequence
location: 71..394
location: region:71-394:1
so has part: feature:71-394:1:exon
subclass of: SO_0000010

position:71:1
position: 71
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394:1
position: 394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71-394:1:exon

CBW24_RS17510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17510
old locus tag: CBW24_17480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLILSTAFLSLVSAPVVAEAVVQAPVTALEIAQAANACPGQQISEASFTVTNSVRVVCKPAAPRVTNQSTPLVGQLGSYGPILGLAAAGAAIAVISSNGSTSGTN
SIO_010081: CBW24_RS17510
subclass of: SO_0000673
so part of: CBW24_RS17510
location: 71..394
location: region:71-394:1
so has part: feature:71-394:1:exon

WP_097374555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71-394:1:exon

CBW24_RS17515
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17515
old locus tag: CBW24_17485
so part of: sequence
location: 583..1131
location: region:583-1131:1
so has part: feature:583-1131:1:exon
subclass of: SO_0000010

position:583:1
position: 583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131:1
position: 1131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583-1131:1:exon

CBW24_RS17515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17515
old locus tag: CBW24_17485
inference: COORDINATES: protein motif:HMM:NF014417.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination NusG family protein
translation: MTRAYVMSLPQHSRSQNWFVAQLKPNGLAMAQRNLDRQGLQHFAPLRHESVRTPRGMSRRARALFPGYIFVTLEPFSPEWRAINATRGISRLVVSDPRRPRPLPDGFLDALRARCDASGTLMHSPPDTFAPGDRVRILSGPFAEIVAVVEHLDDTSRLRLMMDLMGQKVTVTLPAHSAEKAG
SIO_010081: CBW24_RS17515
subclass of: SO_0000673
so part of: CBW24_RS17515
location: 583..1131
location: region:583-1131:1
so has part: feature:583-1131:1:exon

WP_088664947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583-1131:1:exon

CBW24_RS17520
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17520
old locus tag: CBW24_17490
so part of: sequence
location: 1332..3443
location: region:1332-3443:1
so has part: feature:1332-3443:1:exon
subclass of: SO_0000010

position:1332:1
position: 1332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3443:1
position: 3443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332-3443:1:exon

CBW24_RS17520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17520
old locus tag: CBW24_17490
inference: COORDINATES: protein motif:HMM:NF017857.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbH domain-containing protein
translation: MPRRVLISASLCCLGLSAAAEPVLDTGLNSFGAPGLIDMPSALSRPDGQLALTASHFQNNQRTTLSFQVTPRLSGSFTYAHIDDLTRNGTVGELFDRSFSLHYRLADEGLWQPAFAIGLNDVLGTGVYRSEYLVATKTLTPALRVTGGIGWGRLAGVDSFTNPLGLIDDSFETREARDGNLGGEVELGEAFHGPAALFGGLEWQATDTLKFTLEYSSDDYPYEGESSFEYRSPVNVGVSYRPRPDLELSARYLYGSQLGLQASFFVDPTAARAPSGLEKAPPPVAVRSAAELGWPQDTSWAAAPARRDSIAMQAEQALRAQGIDLVGLVLDADRARVEIVNETYLQHPEAIGRSARAMTQVLPASVDRIEVVLVANGMPTSVTTLRRRDLEDLEFAFDNGWSSFARARFGDAPGPLAPLPGSYPRFEWDLGPYLTPSLFDPDGPLRADLGLELNTRYAPAPGLLFRGQLRKKVVGNLDETTRQSDSVLPRVRSDYNLYDTEADPRLTELTGAWFFRPGRDLYGRVSAGYLEPYFGGVSAELLWKPVASDFALGVEANYVAKRDYDMLFGFQDYEVATGHVSAYYEWDNGYFGQIDVGRYLAGDWGTTLTLERTFDNGWRVGAFATFTDVSFEDFGEGSFDKGITLTIPIGQITGQPDRDTYSTVLRPVQRDGGARLDVSDRLYDVVHDTHVPELQEGWGRFWR
SIO_010081: CBW24_RS17520
subclass of: SO_0000673
so part of: CBW24_RS17520
location: 1332..3443
location: region:1332-3443:1
so has part: feature:1332-3443:1:exon

WP_157773265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1332-3443:1:exon

CBW24_RS17525
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17525
old locus tag: CBW24_17495
so part of: sequence
location: 3440..4099
location: region:3440-4099:1
so has part: feature:3440-4099:1:exon
subclass of: SO_0000010

position:3440:1
position: 3440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4099:1
position: 4099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440-4099:1:exon

CBW24_RS17525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17525
old locus tag: CBW24_17495
inference: COORDINATES: protein motif:HMM:NF022552.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbF family lipoprotein
translation: MTLRAPLLPRLRRPVFRPRLALLLLVPLALAACARPAPPDLRATLSRAQIDGFDQPLILAELPQLGTGATLVPVARNGDVRTWSTADGVGLSYRDGLPVATRGLGVDLMNADVTGSLAAIAGRTPPGMVDGYYPRFHSHLDGAGQIRYLSFQCRVTARRTETITLIGQRHVVQRIDETCHLPETRVENSYWRGDDGTLWRTKQWLSEDAGYLITERLKT
SIO_010081: CBW24_RS17525
subclass of: SO_0000673
so part of: CBW24_RS17525
location: 3440..4099
location: region:3440-4099:1
so has part: feature:3440-4099:1:exon

WP_088664945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3440-4099:1:exon

CBW24_RS17530
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17530
old locus tag: CBW24_17500
so part of: sequence
location: 4108..5523
location: region:4108-5523:1
so has part: feature:4108-5523:1:exon
subclass of: SO_0000010

position:4108:1
position: 4108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5523:1
position: 5523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108-5523:1:exon

CBW24_RS17530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17530
old locus tag: CBW24_17500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504431.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015774 - polysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis/export family protein
translation: MAPPRSDQTPCATPRRAVPRLRLAAGALLATLTLAACGITYTAPSVSQSAGGAAVRVVDLDAQTVLLANRDPYRPRTLPAAFSVTAGGSGMGRGVGALPTPPVVPQERPVPLDLRPPPATAPAPYRLGIGDVVLLATRGTASTIQELSGLMAIQNQRQGFTVRDDGAIAIPEIGNVQLAGLTLEDAEAAVFRLLVENGLNPVFSLEVAEFNSRRATIGGAVGRPAIVPIGLTPPNLREALTAAGGISARDQDYVSIRLYRDGNLYQIPFKDYMARADLQQLYLQNGDAVYVDTTYDLERAFAFYQQEIGVISLRQSARAQALGELSQEISLRRAALGEERSNYQTRLDLDAVDRDYVYLAGEVAQQSRYTLPFERQATLADVLYGSGGFPALTGDPSEIYVLRASSNPAEFGAITAWHLDASNAVNLTLMTRMTMRPDDIVFIEQQPITTWNRALQQALPLLNQATTAVSN
SIO_010081: CBW24_RS17530
subclass of: SO_0000673
so part of: CBW24_RS17530
location: 4108..5523
location: region:4108-5523:1
so has part: feature:4108-5523:1:exon

WP_088664964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4108-5523:1:exon

CBW24_RS17535
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17535
old locus tag: CBW24_17505
so part of: sequence
location: 5880..7337
location: region:5880-7337:1
so has part: feature:5880-7337:1:exon
subclass of: SO_0000010

position:5880:1
position: 5880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7337:1
position: 7337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5880-7337:1:exon

CBW24_RS17535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17535
old locus tag: CBW24_17505
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF014414.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclopropane-fatty-acyl-phospholipid synthase family protein
translation: MQTTLFSKFVRRYIRRGNLTIRFPDGHVARFGDGHGRALRFHLTSRRAMWRLALHPDLALGELFMEDRLRMEQGRIHDLLELIFTNVRTDQLTGMQQLTRRGSALRARLGQVNTPLRARRNVAHHYDLNDDLYRLFLEEDRQYSCAYFEHPAATLEEAQLAKKRHVAAKLHLPPAPDYAETETVLNGSPAQGQANRAARNGHAAPGTVRTSPARSNGHAAPRPAPSVLDIGSGWGGLGLYLARHYGADVTGVTLSREQHRVSNDRARRAGLDGRVRFEMQDYRSLARRFDRIVSVGMFEHVGRAHIDTFFACIADLLAPDGVMLLHYIGQSGPPAPTSAWVRKYIFPGGDMPALSEVLPAIERHGLIVTDIEVLRLHYAETLRHWRERFLARRQEAVALYDERFARMWEFYLAAAETSFRHQRLVVHQIQLARRLNALPVTRDYITAEEARLRPRDGGGDSPLPAPHSVTDPARSAAGADPSRPH
SIO_010081: CBW24_RS17535
subclass of: SO_0000673
so part of: CBW24_RS17535
location: 5880..7337
location: region:5880-7337:1
so has part: feature:5880-7337:1:exon

WP_097374556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5880-7337:1:exon

CBW24_RS17540
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17540
old locus tag: CBW24_17510
so part of: sequence
location: complement(7348..8514)
location: region:7348-8514:-1
so has part: feature:7348-8514:-1:exon
subclass of: SO_0000010

position:7348:-1
position: 7348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8514:-1
position: 8514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7348-8514:-1:exon

CBW24_RS17540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17540
old locus tag: CBW24_17510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008994567.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MKIAVAGIGYVGLSNAVLLAQNNTVVAVDISAERVALVNDRKSPIADAELEDYLAGHKLDLSATTEPDAAYRDAEFVIVATPTNYDPVSNYFDTSSVEAVIRQVIAVNRHATIVVKSTVPVGFVEGIRTELATDQVIFSPEFLREGRALYDNLHPSRIIVGERSDRARVFAELLLDGALETDVPVLYTDPSEAEAIKLFANTYLAMRVAYFNELDSYAMALGMDSRQIIEGVGLDPRIGAHYNNPSFGYGGYCLPKDTKQLLANYSEVPQNLIRAIVDANRTRKDFIADRIIERRPQVVGIYRLVMKAGSDNFRQSSIQGIMKRVKAKGIEVIVYEPALDAPEFFASRVETDLEKFKAEADVIVANRATDDLADVAEKVFTRDLFGGD
SIO_010081: CBW24_RS17540
subclass of: SO_0000673
so part of: CBW24_RS17540
location: complement(7348..8514)
location: region:7348-8514:-1
so has part: feature:7348-8514:-1:exon

WP_097374557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7348-8514:-1:exon

CBW24_RS17545
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17545
old locus tag: CBW24_17515
so part of: sequence
location: 8721..10187
location: region:8721-10187:1
so has part: feature:8721-10187:1:exon
subclass of: SO_0000010

position:8721:1
position: 8721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10187:1
position: 10187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8721-10187:1:exon

CBW24_RS17545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17545
old locus tag: CBW24_17515
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009570190.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MAYSAITPVLLAGGSGTRLWPLSRRSYPKQFVPLTGALSLFQHTARRLSGQAVEAGRWLAFAKPLVLTNSDFRFIVTEQLAEMGIDPGAILIEPEGRNTAPAILAAALHLLRADPDAVMLVAPSDHVVPDTAAFHAAIARGLEAVRAGDLVTFGITPTHPETAYGYLELSQPARDGTPVSLQRFVEKPDAARAAAMLAQGNYLWNAGIFLVSAKALIAAFETYAPDLLAPVGAALDGAQTDLGFLRLASGPWAQAPDISIDYAVMEKARNLSVVPFAEAWSDLGGWDAVWRAGDPDAQGTVTSGTATAIDCTGSLLRSDSEHLELVGIGLDNIMVVAMNDAVLVADMSRAQDVRKAVEALQARGAAQATTFPKDHRPWGWFESLVTGPRFQVKRILVHPGASLSLQSHFHRSEHWIVVEGTARVTRDDETRLVTENESIYLPLGCRHRMENPGKVPMVLIEVQTGTYVGEDDIIRYEDVYARGQGARG
SIO_010081: CBW24_RS17545
subclass of: SO_0000673
so part of: CBW24_RS17545
location: 8721..10187
location: region:8721-10187:1
so has part: feature:8721-10187:1:exon

WP_097374558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8721-10187:1:exon

CBW24_RS17550
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17550
old locus tag: CBW24_17520
so part of: sequence
location: 11010..11591
location: region:11010-11591:1
so has part: feature:11010-11591:1:exon
subclass of: SO_0000010

position:11010:1
position: 11010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11591:1
position: 11591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11010-11591:1:exon

CBW24_RS17550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17550
old locus tag: CBW24_17520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSATSPPETNAPSRKAPLAARLTDSLRRRLTKLVVLGALAGGLGVAGSAEARVMEATRHLPQKGIVVIGDDPGGYIDTRLEQIRRLRQTNQPVQIRGSYCNSTCTMFIGLPNACVEPQTEFGFHGPSYSGRRMPRAEFDHWSRIMAAHYPAQVADWFMETARKRIRGLHTLRGDKLIRMGVARCPRATVTAGR
SIO_010081: CBW24_RS17550
subclass of: SO_0000673
so part of: CBW24_RS17550
location: 11010..11591
location: region:11010-11591:1
so has part: feature:11010-11591:1:exon

WP_157773266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11010-11591:1:exon

CBW24_RS17555
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17555
old locus tag: CBW24_17525
so part of: sequence
location: 11758..12561
location: region:11758-12561:1
so has part: feature:11758-12561:1:exon
subclass of: SO_0000010

position:11758:1
position: 11758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12561:1
position: 12561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11758-12561:1:exon

CBW24_RS17555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17555
old locus tag: CBW24_17525
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009825758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase family protein
translation: MTARPCRAIPCKMKFLRRFRAPDPGPAVFAPLAPEAAFCAVGDIHGRADLLDRLLEKLHEQAPPDAAFVCVGDYVDRGEDSARVLRDLQALSVAHPDHVTCLMGNHEEMLLGFLDRPEQAGPGWLRHGGLQTLASFGLPAPAGATPTPAAWEDLRNQLRAALGADLETWLRALPLQWRSGNVAVVHAGADPALPLEAQTTRALLWGHRDFATTPRRDGQWVLHGHTITDMPQMQAGRIAIDTGAYATGRLTAALVLPGMAEPRFITT
SIO_010081: CBW24_RS17555
subclass of: SO_0000673
so part of: CBW24_RS17555
location: 11758..12561
location: region:11758-12561:1
so has part: feature:11758-12561:1:exon

WP_232530372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11758-12561:1:exon

CBW24_RS17560
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: gmd
locus tag: CBW24_RS17560
old locus tag: CBW24_17530
so part of: sequence
location: 12854..14050
location: region:12854-14050:1
so has part: feature:12854-14050:1:exon
subclass of: SO_0000010

position:12854:1
position: 12854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14050:1
position: 14050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12854-14050:1:exon

CBW24_RS17560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: gmd
locus tag: CBW24_RS17560
old locus tag: CBW24_17530
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007811023.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MPRRALITGITGQDGSYLAEFLLAKGYEVHGIKRRASSFNTGRIDHLYEDPHRPDPGLHLHYGDLTDAASLTRILAQTRPDELYNLGAQSHVAVSFEAPDYTAQVNALGTLRLLEAIRFLKLDTRIYQASTSELYGQVAETPQRETTPFHPRSPYAVAKLYAYWITVNYREAYGMHASNGILYNHESPRRGETFVTRKITRGLCQVAQGLEPCLYLGNLDARRDWGHARDYVRMQWLMLQQDTPRDYVIATGQQHSVRQFLIWAAEGLGLELAFEGSGVTERARVARITGDLAPSLRIGQVIARIDPRYYRPAEVDSLLGCAARAREDLGWQPEITARALCAEMVAADLQEARRDALLRAQGWRPDRCAMDGTAPPPQPALRSPAAPRPSTLTRSGAA
SIO_010081: CBW24_RS17560
subclass of: SO_0000673
so part of: CBW24_RS17560
location: 12854..14050
location: region:12854-14050:1
so has part: feature:12854-14050:1:exon

WP_097374561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12854-14050:1:exon

CBW24_RS17565
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17565
old locus tag: CBW24_17535
so part of: sequence
location: 14047..15018
location: region:14047-15018:1
so has part: feature:14047-15018:1:exon
subclass of: SO_0000010

position:14047:1
position: 14047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15018:1
position: 15018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14047-15018:1:exon

CBW24_RS17565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17565
old locus tag: CBW24_17535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-L-fucose synthase
translation: MSGLGRVFLAGHRGMVGQALARHLSHHEVEVITRPRMLVDLRDARAVRHLLIRERPDTVILAAARVGGIGANAADPVGFLCDNLAIAQSVIPAALEAGVERLLNLGSSCIYPRACAQPIAEEALLTGRLEPTNEGYALAKIAAIRLCEAINRQHGTDYRTVMPCNLYGPGDCFDPERAHVLPAMIRRFAGAEREAPVTIWGSGTPRREFLHVDDMAAASLFVMALPRPVWEGVTAPDRRFLNVGAGEDLSILEPARLVARATGHRGEIRTDPTRPDGTPRKLLDTRRLHSLGWRPRISLREGIAATLNWYRRHGDTRRLERLG
SIO_010081: CBW24_RS17565
subclass of: SO_0000673
so part of: CBW24_RS17565
location: 14047..15018
location: region:14047-15018:1
so has part: feature:14047-15018:1:exon

WP_097374562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14047-15018:1:exon

CBW24_RS17570
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17570
old locus tag: CBW24_17540
so part of: sequence
location: complement(15183..16343)
location: region:15183-16343:-1
so has part: feature:15183-16343:-1:exon
subclass of: SO_0000010

position:15183:-1
position: 15183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16343:-1
position: 16343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15183-16343:-1:exon

CBW24_RS17570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17570
old locus tag: CBW24_17540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRRRLTPPRADFLTSAAEPAAGAAPEAPGPLETKTMFRLNPNPVPNPAPRSRAPIADVAGETSASAALSELSQEVAQRRAEGRMVERLPLLQVDAAHLVRDRLTADAEELQALTDSLRDRGQQTPIEVVDRGESARPRYGLIAGWRRMAALLQLSGEAGEAPQDATVLAVIRSPKTASDAYLAMVEENEIRADLSYYERARIVLKSVEQGVHLSQKEALTTLFKHVSRAKRSKIKSFVPVVAALDGVLRFPTALSEKAGLDLARYLAADQGHAARLITRLQDAAPASAEEELALIAAETGSPAMAPAADPDIPAETVPVTGVSDSNPPAPPRQPAAPRAQNRQAESRAAVHADFEPDTGIIRLSGPGVDAAFLLDLEHWLARRR
SIO_010081: CBW24_RS17570
subclass of: SO_0000673
so part of: CBW24_RS17570
location: complement(15183..16343)
location: region:15183-16343:-1
so has part: feature:15183-16343:-1:exon

WP_097374563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15183-16343:-1:exon

CBW24_RS17575
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17575
old locus tag: CBW24_17545
so part of: sequence
location: complement(16428..17876)
location: region:16428-17876:-1
so has part: feature:16428-17876:-1:exon
subclass of: SO_0000010

position:16428:-1
position: 16428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17876:-1
position: 17876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16428-17876:-1:exon

CBW24_RS17575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17575
old locus tag: CBW24_17545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014876638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVQSKTQSRDRARDTARDSGQPPYFNIDPDRALRDLDAPVGTARFAEIAEACGRGRADLASRGMDETGRKQLRLFSTWEITRYLIPVATPHFRRVLKANPDLPQGLSETEGGAKWFTLDEVLRLRAHFATEGSKAKEYRPYRPAGLPAKMVAVANFKGGVGKTSTAAHLAMSAALDGYRVLVIDLDSQGSMTSIFGGQVADEWQTVFPLLARHYAQYLRRENQGRLDRGEPPIPLDDTLGEALKVTAADLIQTTHWPNIDLIGAQLNLYWSEFQIPVWRMQARGWKLWDALTDMLEADGVLDAYDVVFLDTPPALGYLTINGLAASDILLVPLGASFLEFDSTGRFFDMLHSTFQSIEDGENMAARALGRDELAFEWDAVRAVVTRYDSAQQGELTSLMQAYLGQTLSPHRQDYTALIGQAGEQVSGIYEADYRDFNRETYVRGRETFDATYAAFKRLLLGAWRRDELAAGADVGAEGDVAP
SIO_010081: CBW24_RS17575
subclass of: SO_0000673
so part of: CBW24_RS17575
location: complement(16428..17876)
location: region:16428-17876:-1
so has part: feature:16428-17876:-1:exon

WP_088664938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16428-17876:-1:exon

CBW24_RS17580
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17580
old locus tag: CBW24_17550
so part of: sequence
location: 18275..19312
location: region:18275-19312:1
so has part: feature:18275-19312:1:exon
subclass of: SO_0000010

position:18275:1
position: 18275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19312:1
position: 19312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18275-19312:1:exon

CBW24_RS17580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17580
old locus tag: CBW24_17550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MAGAGSSAGALAAGKSLLPDRHPQIDFFLCDIFDAIPKDDIATMEHPVFSLSTRPDRRVLDYVHNGTRIEVTPSVKGLATIHDKDILIFCVSQLMAALNAGRAIGRTVTLRAHDLLVATNRETSGDAYRRLREAFERLAGTRITTNIVTGDHEVTSGFGLIESWEITRRTRGGRMVSVTVTLSDWLYRAVMAKSVLTLSRDYFRLRKPLERRIYELARKHCGRQEAWRVSVEVLLKKSGSASPRRVFRRMLRDMIAAGHLPDYDMAEEEGDVIRFTRRGRLVEGPAGPEAPPLSPEVLEVVRDLLPGADVYALEAEWRAFWASSGRPRLRSADGAFLGFVRKKMG
SIO_010081: CBW24_RS17580
subclass of: SO_0000673
so part of: CBW24_RS17580
location: 18275..19312
location: region:18275-19312:1
so has part: feature:18275-19312:1:exon

WP_097374564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18275-19312:1:exon

CBW24_RS17585
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17585
old locus tag: CBW24_17555
so part of: sequence
location: complement(19570..19752)
location: region:19570-19752:-1
so has part: feature:19570-19752:-1:exon
subclass of: SO_0000010

position:19570:-1
position: 19570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19752:-1
position: 19752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19570-19752:-1:exon

CBW24_RS17585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17585
old locus tag: CBW24_17555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLHPTHPARAAQIRGHARDRQFGCVRTGAYSVVQGDLLWEENGVACVQVYSRLFIGEKV
SIO_010081: CBW24_RS17585
subclass of: SO_0000673
so part of: CBW24_RS17585
location: complement(19570..19752)
location: region:19570-19752:-1
so has part: feature:19570-19752:-1:exon

WP_088664936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19570-19752:-1:exon

CBW24_RS17590
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17590
old locus tag: CBW24_17560
so part of: sequence
location: complement(19825..20715)
location: region:19825-20715:-1
so has part: feature:19825-20715:-1:exon
subclass of: SO_0000010

position:19825:-1
position: 19825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20715:-1
position: 20715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19825-20715:-1:exon

CBW24_RS17590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17590
old locus tag: CBW24_17560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007118887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPPYAPVSTPAPSFAPRGAALLRLPRHPLLQLPGLVLAGLLLMPQPGHAATGLHMSVVSPGGDSPVSARTLGRTSDAALGWDRAPALDITFWNGWEDIESLALGLRPIEAAAPPRLTYRLSTKGAPRQLEFSPLRADPRAARLRHLVGYAEARRDGHDAVQYGARIRPAKKPTQMTLAEIEAWTRATPGQHHAIGRYQFIPKTLRRLTRQAGLAGSTRFTPAVQDALADMLLEEAGFTAFRKGQLGRRAFMRNLAQIWAGLPLANGRSYYHGHAGNRATITWASFDTEIRRIFAK
SIO_010081: CBW24_RS17590
subclass of: SO_0000673
so part of: CBW24_RS17590
location: complement(19825..20715)
location: region:19825-20715:-1
so has part: feature:19825-20715:-1:exon

WP_097374565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19825-20715:-1:exon

CBW24_RS17595
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17595
old locus tag: CBW24_17565
so part of: sequence
location: 21224..22159
location: region:21224-22159:1
so has part: feature:21224-22159:1:exon
subclass of: SO_0000010

position:21224:1
position: 21224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22159:1
position: 22159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21224-22159:1:exon

CBW24_RS17595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17595
old locus tag: CBW24_17565
inference: COORDINATES: protein motif:HMM:NF025600.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YHYH protein
translation: MFDPARFTPKTRSVLGALVALAGTGGTGSAHDITDAIFTERVGSCADYVAENTATATDVQQQQRYAASTLITTDGTTCTISSNAVPNHDFNATGQFAHPFSPQEQSYTLPADPRATETPTALSLQTDNAIFLNGVKLDLMAAGCFGVGNGFIGCNDMATPYRYDPMGPGGEFGTDEHNAHTQPDGTYHYHGNPMALFEQATPTAASPVIGFAADGFPIFGSYINDNGTIRPATSSYRLKTGTRPDGPGGTYDGTFVDDWEYVAGSGDLDQCNGMIQDGVYGYVVTASYPHVLGCFTGTPDASFNKPPPNEG
SIO_010081: CBW24_RS17595
subclass of: SO_0000673
so part of: CBW24_RS17595
location: 21224..22159
location: region:21224-22159:1
so has part: feature:21224-22159:1:exon

WP_097374566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21224-22159:1:exon

CBW24_RS17600
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17600
old locus tag: CBW24_17570
so part of: sequence
location: complement(22586..28684)
location: region:22586-28684:-1
so has part: feature:22586-28684:-1:exon
subclass of: SO_0000010

position:22586:-1
position: 22586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28684:-1
position: 28684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22586-28684:-1:exon

CBW24_RS17600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17600
old locus tag: CBW24_17570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxypeptidase-like regulatory domain-containing protein
translation: MRSFLRKMSARPLRIADRPIRSAATALLLFAALPGFGTGGSGFGTVFGPGFGFGLGFAAQAAPTPAGTVIRNIAEGSYFNAALGIRETVRSNPVEALVAEVPDMEVTGFTDLVLSRGAMDQYHYEIRNTGNVTLEMTPSMRLQGATGLIGSAELIHDENRNGVIDPQEPVIDAETETAPAAPAAFAARSAAPATFAATPAAAPTSFTMEPGDRLSFIYSFRVSSSAQPGDRFSAILVGNASSLSVTSQTELSGEGTGHTTIVVSGLEIEKNQRLQMDDTNGSDTLIYGLRLRNNSEGAVAGYDSVEDAPLRIDGQQVTGVLVRDEIPRNAVFAEILETGGMTGLYHLRDAGAQDYQTTPPADPGMVDAVGFFHAGDYPVGRSTDLSFSVGVEPSLGAVTIDNTAQAYLDVEGEQVGLNSNRVSYALAARQPATLTFIDAVTGADAPYGALDADARLQIVSGACNVSLDVDVVTVTLRSTVTGDIETVAARETGPNTGLFRTAPVPLARMTVPVHGDGVMASDQGDRIQALARCGNTLLEDMLLVEPGNFLFNSVTNDPVEGITLVLVEMGSGREMARTVTDARGFYAFGSVEAGDYRISTLDAPEWVFPSVRLDFPGYGRQVLPAAFGASFAHEGGVVAITDIPVDPYYGAPLALRKSAERDSIGQGEFLLYTLEIDNNMHQALIDAQIFDRPPFGTELVAGSVTLDGAVLADPVRDAEGDMIFELGNLLPLERYELSYLLHFTAAAREGRNENTALLAGRQAGTGVLQQSPLARTTVRLDNSGGVFARQGTVIGSVFLDCNGNGIRDGIMPRDTYEPDAPAPAHADHEPGIPGVRIVTQEGLFVVTDSHGQYSLPGLRPVTHAFLVQPETLPRGTEVQITRSNDLRRGGSRVVPLRRGEMRAEHFAVRACTPAVLAEIDTRRARLREGATPMTMTASDLPIEGARAPTRSSRSEAGLPTTTQLTPGMLAEAAASNDPAPADTSADTSARGGAAAPGGADSARRAPTPLAQKPAAQRQPLARMVRGLDPAPGFLDLADGDTVARRTQSIRIKGKADLTLALLLNGRRIGADRVGEHTTWERNNVQAMEFVAVRLAPGENRLTLLGNDGFGIERLRQEIRITAPGDPARLEIIAPETAPAAPASVLPVVVRILDARGLPVPASGTVTLRAGKALWDVTDIRPGTPGIQAYIDNGEATFGLIPPQVSGPDTLTVTGGFGQAETRITFTPDLDERVMIGVIEGAVALGDRRNRDVTGAGLLPADRFSGFEDTTTGLRGELYLKGAIRGDALLTLRYSSDRDTEDRLFRDIRGDEYYPVYGDNSERGYDAQSSGNLFVKVEKGRSYILYGDISIEPESSAFRLGGLRRVVTGAKGHWENDRVSVTVFGARTAQDRQIVEFAGRGVSGPYDLTLDGYVEGSEQVEILVRDEQGGDILSATPLRRGTDYLLDFFRDTITFDAPVRQFDGDGNPVSVRVTFEAEEDSADRYWLYGGEVNYTLTDTTSVGVRAVQADAPLYNPARSRLQAAYIRHEDHTGGLWEAEVARSENAEGIAGSAARLSYERRTERESLSFEAVHSGRDFEAEGSLARAGTTQLRFSYGLALDDGGDLSLSAEYVKDRVARSERLTTELLYAHRFTERFRGEIGIEVESTRQERADPETSAALVLGSHWTPRTRPDSTIRTRLRLPIGGDPATRAPAELTLGLYREPEPGWRAYAEVEFTFGDEGVGNRSRVGFEYTLTDWLEGRTEFSRVPGALEETLHQGVAATYDYSELTTFRVDLEHSRLVDSGADQLTSLALGAKWGSFDDRWVGDADFDTTIEERGNTYYASVGLAGQVTPDLTVLGRTRIALDQRDTVDSRRMRSRIGAAYRPIANPRLEVLGWYEHRLEQKYARTETHMWSVDASYEMNEDLRVNGKYAGQHQRVELPAPEDREDGTDISATTQLLQAGLNWEFGEDRFQFGLNVARLWDSHGHASIGFGAEFGVTPTEGVLLAIGYNSLRGEVA…
SIO_010081: CBW24_RS17600
subclass of: SO_0000673
so part of: CBW24_RS17600
location: complement(22586..28684)
location: region:22586-28684:-1
so has part: feature:22586-28684:-1:exon

WP_097374567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22586-28684:-1:exon

CBW24_RS17605
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17605
old locus tag: CBW24_17575
so part of: sequence
location: complement(29360..32002)
location: region:29360-32002:-1
so has part: feature:29360-32002:-1:exon
subclass of: SO_0000010

position:29360:-1
position: 29360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32002:-1
position: 32002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29360-32002:-1:exon

CBW24_RS17605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17605
old locus tag: CBW24_17575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005850275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NEW3 domain-containing protein
translation: MIHPPFFLRSASAVAVTAMLGAAAYAAAPEAGSVIGNQAVATYTNSAGDTITVTSNTVETVVQQVAGVTLDSDNTETIAPGGKAFLPHIVTNVGNGPDSYALTATEDGSGTLDTSQLVFYPDADMDGVADSATPLTSTPTLAPGEQFGVVIEATVPSTATGSDTITVTSTSALDGTVAATNTDTLTISTDAIVELVKSMTADAASGGDPNIVDAGDTVTITLTYSSTGLTAADNYIVQDVLDGDLTYVKGTARWSDSAVPLDDDNGSTVVDATNGNSETIAWDYDDTQTVNFTLSSVGSGRSGSVTFDVVIADTADAGIIPNTATQTVDGVAFPPSNTASVTVANQYSVSIADTAINGDGTPNGAITSATDDDTLSNDIVTESGSVYQGGTIAQEFVLTNNSNRADSLAVSVANVDFPAGTTFRIVGADGVTPVIGSVGPLAIGASTKVTLLATLPTDAPVTAVADYTATMTTTSDASGVSDISTAEFTGAVLASSVDLENNVVGDEGDGANPYDPLGDPWISSTTDPGAPVTYDMLVQNGGTVSDSYNLSLAQALPVGWTVEFRLADGTLVSNTGTIPAGASTQVFVTVTPAADSAPLTQEIDIQVASSVSGQSDRIVNDITVNEIYDVQIIEDQSAQASPGGIVDLLHTITNEGNVDISEGAITQSGLTNFSGAIYWDQNDNGVIDPTEPVIDNFDDLTDGLGVGVNGLAAGESISVIYRVQTPSTATVGVSEIGTLSLASSLNTGTATDADTADNAVEDRIVIISGDVTLTKYQYIDANCDGTVGVFTKTRQDVEPGQCIRYMIEAENTGSYEARDVIISDAAPAYTSITSCGTACPETLFPGTSTATATSSSITSNHGTVLPGGFARLEFTVEVDQ
SIO_010081: CBW24_RS17605
subclass of: SO_0000673
so part of: CBW24_RS17605
location: complement(29360..32002)
location: region:29360-32002:-1
so has part: feature:29360-32002:-1:exon

WP_232530370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29360-32002:-1:exon

CBW24_RS17610
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17610
old locus tag: CBW24_17580
so part of: sequence
location: complement(32309..32839)
location: region:32309-32839:-1
so has part: feature:32309-32839:-1:exon
subclass of: SO_0000010

position:32309:-1
position: 32309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32839:-1
position: 32839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32309-32839:-1:exon

CBW24_RS17610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17610
old locus tag: CBW24_17580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007118890.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISVFSASRSGFAAMALVLALPLSLGAASAAAEALESQFSYLIVETDAEGAEQLVARTSVKPGETIHYQLQHTNTTEDAMSGLVIAAPVPQGVTISLGSETTSVPAVFEVQAELDPENEGLEWSTLPATRVVIEADGTTREEPLPEADIAAVRWSYSEPLDPGAVGLNAYRVRVN
SIO_010081: CBW24_RS17610
subclass of: SO_0000673
so part of: CBW24_RS17610
location: complement(32309..32839)
location: region:32309-32839:-1
so has part: feature:32309-32839:-1:exon

WP_088664931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32309-32839:-1:exon

CBW24_RS17615
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17615
old locus tag: CBW24_17585
so part of: sequence
location: complement(33615..34235)
location: region:33615-34235:-1
so has part: feature:33615-34235:-1:exon
subclass of: SO_0000010

position:33615:-1
position: 33615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34235:-1
position: 34235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33615-34235:-1:exon

CBW24_RS17615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17615
old locus tag: CBW24_17585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005851242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKLRILIADDHDMVRETLAMFLGADGTVQTTAAHDLPEALAKMRSEGPFDLVLLDYSMPGMKGLDGLRTAIAAHGGNPVGLISGTASRLIADQALEMGAAGFLPKTMSAKSLVNAVRFMAAGEIYAPVGFMSGKEDPEETDFEKVLSDRERQVLRGLMHAQSNKEIARDLDLQEVTIKLHVKTLCRKLDAKNRTDAAMIARDAGFV
SIO_010081: CBW24_RS17615
subclass of: SO_0000673
so part of: CBW24_RS17615
location: complement(33615..34235)
location: region:33615-34235:-1
so has part: feature:33615-34235:-1:exon

WP_088664930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33615-34235:-1:exon

CBW24_RS17620
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17620
old locus tag: CBW24_17590
so part of: sequence
location: 34519..35079
location: region:34519-35079:1
so has part: feature:34519-35079:1:exon
subclass of: SO_0000010

position:34519:1
position: 34519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35079:1
position: 35079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34519-35079:1:exon

CBW24_RS17620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17620
old locus tag: CBW24_17590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011045931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MFTRKTSLLAAVAALIGAALVAGETLTPGAAQADSTTTAPRAVPASAEATATSAPILLTVTDGARSLSFDRAALEALPRTQIETSTIWTEGLQRFDGVSLKDLLAHAEVTSGTLQATAINDYSVTIPVSDAVEDGPIIAYLANDTPMSRRDKGPLWIVYPYDDNPDYQAETIYSRSIWQLDRLIVE
SIO_010081: CBW24_RS17620
subclass of: SO_0000673
so part of: CBW24_RS17620
location: 34519..35079
location: region:34519-35079:1
so has part: feature:34519-35079:1:exon

WP_232530371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34519-35079:1:exon

CBW24_RS17625
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17625
old locus tag: CBW24_17595
so part of: sequence
location: 35199..38030
location: region:35199-38030:1
so has part: feature:35199-38030:1:exon
subclass of: SO_0000010

position:35199:1
position: 35199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38030:1
position: 38030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35199-38030:1:exon

CBW24_RS17625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17625
old locus tag: CBW24_17595
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTTDPARATTPRRPRLWRGMLALALVLACLAAAYLSFAVWSYIRNLDTAQQDHAEWVLSQLEVEYLKLDRALDHAIDLAPAATAAAAAGTTAGTGTGPDAAALEELRKRFDILYSRVQVIQAQSHGADHDPAVRRILTVLRGELDALIPLIDSSDSALRQGLGVLTRALARIGDLPREVALASIATAAETMERERHRVAGLLEGMIAVVLLVLLALLVTVIRLFRQTVALDAASQVAEESRLRLDTTLRGSLDAVVVTDDRARILDFNGSAESVFGHLREDALGRDFIDLLIPAPRRAELRGMLNHFHNTRETTWADKGRREAWMLHRDGRVFPVEMSVSLARIKSGPVFVSYIRDITDKKEKEAEIIRTRDEALAAYREKSRFFAMMSHEMRTPMNGVLSALQLLADSPLDAEQRGFVAAASTSGDILLGHINDVLAIERAEAGEGRGEDSLQPCDPAALARTMIATMEPLAQVSGARLHLQRDGLAGLDGRWVRSDPRALQQILVNLLSNAIKFAPGGDVTLEAGFHDSTAQTGVAPARPLLRLEVRDTGVGIPEAEQARIFEDFVSLDSRYERRTGGTGLGLGIVRRLVGRLGGEITCQSAPGQGARFRVDLPVDPCAPETTELERTAQDGAPAPDLPASPVSAEAEAGHSRAGARGAGNSEAGNSGTGQVTPRQLLLVDDNEINRDLLGVMLRRMGHEVTLAPGGAEAIALAAAHRYDAILMDISMPGISGVQATRTIQSAADSRNRATPIIAVTAHALPHEREEFRAAGMTGFLQKPVDRAALAQSIADLPLPANAAARAAPSERPDLAPDLAPDPIHAPALAPAAPPQPPVLNDTQVADLTELLGTAQLRERLARLEGQIDHDLPALQQATATEDIQARAHALAGICGMFGIERLHIRLKAIETACKAGDRGAAQAQMPPLAAAWEEARAAWHARLG
SIO_010081: CBW24_RS17625
subclass of: SO_0000673
so part of: CBW24_RS17625
location: 35199..38030
location: region:35199-38030:1
so has part: feature:35199-38030:1:exon

WP_198405299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35199-38030:1:exon

CBW24_RS18435
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18435
old locus tag: CBW24_17600
so part of: sequence
location: 38867..39475
location: region:38867-39475:1
so has part: feature:38867-39475:1:exon
subclass of: SO_0000010

position:38867:1
position: 38867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39475:1
position: 39475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38867-39475:1:exon

CBW24_RS18435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18435
old locus tag: CBW24_17600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLLVIALVGALPFLSACEPLDSGPAPAREVPLTCSDRQKTVVYTKSGSPVRVDPVLKGEPCPPPVTAYARPTAFSDPDCEPAAPGVTQSCRDEPPFTPENPTDPTDPTDPNNPDNSGEEEGSAAEAGGGNAGASASQGDEASAAEAGGGNAGASASQDDQASAAQAGGGTASSSASQGGETSTTPSGPTSPTAPTAPTRP
SIO_010081: CBW24_RS18435
subclass of: SO_0000673
so part of: CBW24_RS18435
location: 38867..39475
location: region:38867-39475:1
so has part: feature:38867-39475:1:exon

WP_141100300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38867-39475:1:exon

CBW24_RS18440
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS18440
so part of: sequence
location: 39703..40293
location: region:39703-40293:1
so has part: feature:39703-40293:1:exon
subclass of: SO_0000010

position:39703:1
position: 39703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40293:1
position: 40293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39703-40293:1:exon

CBW24_RS18440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS18440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTTTGPRAERQDRPMRGQTIKGLMAATLGMTVAMGATTPVLADGYLSAGRSWSGSYSHSTAVEKSYRLNLMDTQKKLEEGYYDNIGSTTTNYYYDSSVGAVNVTADPGSTVEMEVRTADGTGNTTTSTSIGASNTTTTEVNIDGSGNTIGIDSYADSTGCQDGSIQISTSGITGVDISSGSSTSSSTSGGGNTC
SIO_010081: CBW24_RS18440
subclass of: SO_0000673
so part of: CBW24_RS18440
location: 39703..40293
location: region:39703-40293:1
so has part: feature:39703-40293:1:exon

WP_157773267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39703-40293:1:exon

CBW24_RS17635
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17635
old locus tag: CBW24_17605
so part of: sequence
location: 40304..41830
location: region:40304-41830:1
so has part: feature:40304-41830:1:exon
subclass of: SO_0000010

position:40304:1
position: 40304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41830:1
position: 41830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40304-41830:1:exon

CBW24_RS17635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17635
old locus tag: CBW24_17605
inference: COORDINATES: protein motif:HMM:NF015724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsgG/HfaB family protein
translation: MKLLPTIAALAALLATSACSTIVASKGEDLALAQGPAIADIVTPFDDALLCLRGKINKGLTFAVGGIPDQTGTYQNNGEGVGKFVTQGAGDIVQSALFKSGVTLINRRDMGTTALEGQWGLIDLRAQRRAHFVVTGSINSLDFIPGGGAALTVGGVGPNYRQNRILVGLDLAMTNVSNGQIYANVALRKQIFADEFGLLTARFINDNVVDFELGGARREAVNYALRQMLQLATYELLVQMMPAEKYVECSAKLDAKMGRITGDQTSAEQLREFDEKRAAELAALAAQPLGAEVSRDETAPAQAGTETPAQAAAAQPGTARAPQTAEFDPESPVARTARSASAITASSGSMASPASSGVPAEETEESRLNAPASTPAAPAPAGAVCAGAAPPPPCRQARATTPQTTPQPSDSAEEAAQNDATGDLPAEIAPGDRVEARPTGPLLPALATGETTPLRDAALLPPLRDIPTTGTTVGAMTARPVPANTSAMLRRPVAALGAGVETSDRLGA
SIO_010081: CBW24_RS17635
subclass of: SO_0000673
so part of: CBW24_RS17635
location: 40304..41830
location: region:40304-41830:1
so has part: feature:40304-41830:1:exon

WP_157773268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40304-41830:1:exon

CBW24_RS17640
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17640
old locus tag: CBW24_17610
so part of: sequence
location: 41967..42818
location: region:41967-42818:1
so has part: feature:41967-42818:1:exon
subclass of: SO_0000010

position:41967:1
position: 41967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42818:1
position: 42818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41967-42818:1:exon

CBW24_RS17640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17640
old locus tag: CBW24_17610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKFMLSAATAALLTATGASAQVVDSFNQTIDDALSGVPASFASMAINNMGIDGSIDISGDADQAFSGAFTYDETTDNSDSLQTNNIDNSIDYDSLDITSQMSAANGGMASDVFGNAVDSGTGGSAAFDGTYTEISEATTATDNSTTDINTATSDVSIAGDLAVEAATQSIGDVSSLAAGAVNTGNFNVTENAGVLDDSSLASTSSTMAEASSMASFGSGVGIVSAAVNDSTNSNTDDLASINGSIGISMAAGNFSVGSVDSVAAGAINTTDVSAVFFGTGDN
SIO_010081: CBW24_RS17640
subclass of: SO_0000673
so part of: CBW24_RS17640
location: 41967..42818
location: region:41967-42818:1
so has part: feature:41967-42818:1:exon

WP_157773269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41967-42818:1:exon

CBW24_RS17645
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17645
old locus tag: CBW24_17615
so part of: sequence
location: 43147..44280
location: region:43147-44280:1
so has part: feature:43147-44280:1:exon
subclass of: SO_0000010

position:43147:1
position: 43147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44280:1
position: 44280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43147-44280:1:exon

CBW24_RS17645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17645
old locus tag: CBW24_17615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003536869.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MDRRKFMRGAAVGALGSAGAASLAAPAIAQESPKVRWRCTSSFPKSLDTIYGGAEDVAKYVREATDGAFDIQVYAAGEIVPGLQAADAVSNGTVEMCHTAAYYYVGKDPAWALGGVIPFGLNARGMHAWLYYGGGLDLLNEFYGTQGLHYLPAGNTGAQMGGWFRKEINGLADMEGLQMRIAGLAGRVMEKLGVVPQQIAGGDIYPALERGTIDAAEWIGPYDDESLGFYQVAPYYYYPGWWEGNLSLCCYFNQESWQSLPENYRSLLGTATRAATTEMLAEYDYKNPQALRRLIDAGAQLRAYPQDVMNASFTAAQEVYAEINGENEAFKKIYDSMMQFQSETYLWQQVAEYTYDTFMMIKQREGALAGQQAGGNQ
SIO_010081: CBW24_RS17645
subclass of: SO_0000673
so part of: CBW24_RS17645
location: 43147..44280
location: region:43147-44280:1
so has part: feature:43147-44280:1:exon

WP_088664958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43147-44280:1:exon

CBW24_RS17650
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17650
old locus tag: CBW24_17620
so part of: sequence
location: complement(44378..46369)
location: region:44378-46369:-1
so has part: feature:44378-46369:-1:exon
subclass of: SO_0000010

position:44378:-1
position: 44378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46369:-1
position: 46369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44378-46369:-1:exon

CBW24_RS17650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17650
old locus tag: CBW24_17620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009208544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease subunit
translation: MLELIAHNLAPIMFISVMGMLLLGYPVALTLAAGGLFFFVIGVALSEIAPSEINLFWPLLRAQPERVFGIMSNDTLLAIPFFTFMGLILERSGMAEDLLDTIGQLFGPIRGGLAYAVILVGALLAATTGVVAASVIAMGLISLPIMQRYGYDTSVATGTIAASGTLAQIVPPSLVLIVMADQLGVSVGDMYKGALLPALIITGAYCAYIFVLSILRPKAVPALPIEDRTLGNGIWSLVVVMALAVAVYVISARTLYADMLPTNRLVAAATTAVVLAYLVAVANRVFGLTVLSKLAEQVVIVLIPPLALIFLVLGTIFLGIATPTEGGAMGAVGALILAIAKRRLDFATLRGAVESTAMLSTFVMFILIGARVFGLTFYGVNGNVWLEELLLGLPGGEYGFLIVVTVVVFILGCFLDFFEIAFILVPLLAPVAQTLGIDLVWFGVILGINLQTSFLTPPFGFSLFYLRSVVPTQDWTDEVTGRRMPAIRTPRIYRGVLPYIALQFAMILLVIGVPSLVTHYQDTPRRPVVPASAPATSATPQTGGTSGSQSGGNSLGLPPLNFGGPGSAPSGSTGNATGGATGTGSSSGSQPSMGLPPLDLNGTGGSGSAPAPAQPSMGLPPLDFGGGAGGSAPASPAPEPEPEPEPAPAPSGGIDLSQPPSFN
SIO_010081: CBW24_RS17650
subclass of: SO_0000673
so part of: CBW24_RS17650
location: complement(44378..46369)
location: region:44378-46369:-1
so has part: feature:44378-46369:-1:exon

WP_097374572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44378-46369:-1:exon

CBW24_RS17655
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17655
old locus tag: CBW24_17625
so part of: sequence
location: complement(46362..46940)
location: region:46362-46940:-1
so has part: feature:46362-46940:-1:exon
subclass of: SO_0000010

position:46362:-1
position: 46362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46940:-1
position: 46940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46362-46940:-1:exon

CBW24_RS17655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17655
old locus tag: CBW24_17625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018095209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease subunit
translation: MRALLALSRGIDAVTRVVGQAAAWLILVAVLVSAGNAVIRKAFNMSSNSWLELQWYLFGAVFMLCAAWALQRNAHVRIDVVTAHLRARTRAWIDLICHVLFLAPFVLLMTWLSWPFFMRSLASGESSSNAGGLILWPAKGLVLLGFIVLIVQTVSEIIKRVAHLTGHLPMPAADTGHTGGAAAADGEIAHNA
SIO_010081: CBW24_RS17655
subclass of: SO_0000673
so part of: CBW24_RS17655
location: complement(46362..46940)
location: region:46362-46940:-1
so has part: feature:46362-46940:-1:exon

WP_088664956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46362-46940:-1:exon

CBW24_RS17660
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: htpX
locus tag: CBW24_RS17660
old locus tag: CBW24_17630
so part of: sequence
location: 47302..48288
location: region:47302-48288:1
so has part: feature:47302-48288:1:exon
subclass of: SO_0000010

position:47302:1
position: 47302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48288:1
position: 48288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47302-48288:1:exon

CBW24_RS17660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: htpX
locus tag: CBW24_RS17660
old locus tag: CBW24_17630
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008883750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc metalloprotease HtpX
translation: MGYFKTAMLMAAMTALFMGLGYLLGGSGGMVIALVMAAAMNVFTWWNSDRMVLRMHQARPVTAGDRSGLTEMVADLARRANLPMPAVYLIDTPQPNAFATGRNPANAAVAVTRGLMDSLDRDELAGVIAHELAHIRNHDTAIMTVTATFAGAISLLANFALFFGGRRENGLGIIGTVAMMILAPLAAALVQMAISRTREYAADRAGAEISGNPLALASALERIAMGAARIDNDVAERNPATAHMFIINPLHAHKRDALFATHPATENRIAALRQMAQDMPRPTPRPSSGPTPNPARPAPAPASAAAPWGQAPRKDRSRKDRSPRGPWG
SIO_010081: CBW24_RS17660
subclass of: SO_0000673
so part of: CBW24_RS17660
location: 47302..48288
location: region:47302-48288:1
so has part: feature:47302-48288:1:exon

WP_097374573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47302-48288:1:exon

CBW24_RS17665
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbA
locus tag: CBW24_RS17665
old locus tag: CBW24_17635
so part of: sequence
location: complement(48298..49176)
location: region:48298-49176:-1
so has part: feature:48298-49176:-1:exon
subclass of: SO_0000010

position:48298:-1
position: 48298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49176:-1
position: 49176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48298-49176:-1:exon

CBW24_RS17665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbA
locus tag: CBW24_RS17665
old locus tag: CBW24_17635
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008031527.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MTNRKGIILAGGSGTRLYPITMGVSKQLLPIYDKPMIYYPLTVLMLAGIRDIAIITTPHDQDQFQRTLGDGSQWGVSLRYIVQPKPEGLAQAFILGEAFLNGAPSAMVLGDNIFFGHGLPDLLQAAARAPQGATVFGYRVADPERYGVVDFDAAGRARAIIEKPAIPPSNYAVTGLYFLDGSAPARAKRVRPSARGELEITSLLESYLQDDLLSVQKMGRGYAWLDTGTHGSLLDAGNFVRTLTERQGQQVGSPDEVAFEMGWTSRNQLDGQAQQFCKNGYGAYLAGLTLEH
SIO_010081: CBW24_RS17665
subclass of: SO_0000673
so part of: CBW24_RS17665
location: complement(48298..49176)
location: region:48298-49176:-1
so has part: feature:48298-49176:-1:exon

WP_088664954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48298-49176:-1:exon

CBW24_RS17670
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbD
locus tag: CBW24_RS17670
old locus tag: CBW24_17640
so part of: sequence
location: complement(49173..50087)
location: region:49173-50087:-1
so has part: feature:49173-50087:-1:exon
subclass of: SO_0000010

position:49173:-1
position: 49173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50087:-1
position: 50087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49173-50087:-1:exon

CBW24_RS17670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbD
locus tag: CBW24_RS17670
old locus tag: CBW24_17640
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007812016.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MTVLVFGHSGQVATELRRLAAQRTPPVPVVALGRARADLMEPGACAAAIRAHAPCAVINAAAYTGVDRAEAEAPQAIRLNAEAPAVMARACAARDIPFVHISTDYVFDGAGHAPFAPGDPTAPLGVYGRSKRAGEVAVQEIMDTARKTGAGPGRYAILRSSWVFSAHGANFVKTMLRLSEQRDHIRVVADQIGGPTPARAIAAACLDIAGHLARDPSAAGLYHFSGTPEVSWAGFARAIFAAAGRQVTVEDIPSAAYPTPAARPLNSRLDCSRTTQVFGLSRPEWRRDLTPLLAELDLPTGALT
SIO_010081: CBW24_RS17670
subclass of: SO_0000673
so part of: CBW24_RS17670
location: complement(49173..50087)
location: region:49173-50087:-1
so has part: feature:49173-50087:-1:exon

WP_097374574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49173-50087:-1:exon

CBW24_RS17675
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbB
locus tag: CBW24_RS17675
old locus tag: CBW24_17645
so part of: sequence
location: complement(50084..51277)
location: region:50084-51277:-1
so has part: feature:50084-51277:-1:exon
subclass of: SO_0000010

position:50084:-1
position: 50084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51277:-1
position: 51277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50084-51277:-1:exon

CBW24_RS17675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbB
locus tag: CBW24_RS17675
old locus tag: CBW24_17645
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017929908.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKLLVTGGAGFIGSAVVRQAIAQGHEVVNLDALTYAACLASLAPVADSPAYAFEHANICDGQAVARVLASHRPDIVMHLAAESHVDRSIDGPGAFIETNITGTYVLLEAARAYWTRAGRPAGFRFHHISTDEVFGTLGPEGHFTEDSPYDPRSPYSASKAASDHLVRAWHETYGLPVVLSNCSNNYGPYHFPEKLIPVVILNALAGREIPIYGNGSNIRDWLYVEDHADALLRVAQAGVNGRSYAIGGENERSNLDLVHSICAILDRLRPRAEGPHAALIRFVADRPGHDARYAIDPARIRAELGWRPSVTVEEGLERTVRWYLDNDAWWRPLLSRQGVGRRLGTEPAGPRPEADRGPEPGGAVDTGSGMERGRGRAWNADRNGPQAASSAQGRGAA
SIO_010081: CBW24_RS17675
subclass of: SO_0000673
so part of: CBW24_RS17675
location: complement(50084..51277)
location: region:50084-51277:-1
so has part: feature:50084-51277:-1:exon

WP_097374575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50084-51277:-1:exon

CBW24_RS17680
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS17680
old locus tag: CBW24_17650
so part of: sequence
location: complement(51274..51861)
location: region:51274-51861:-1
so has part: feature:51274-51861:-1:exon
subclass of: SO_0000010

position:51274:-1
position: 51274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51861:-1
position: 51861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51274-51861:-1:exon

CBW24_RS17680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
gene: rfbC
locus tag: CBW24_RS17680
old locus tag: CBW24_17650
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187399.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MIVEQTSLPGVLLLTPARFGDARGFFSESWNRRTLAGHGITTEFVQDNHSLSERVGTVRGLHFQAPPHAQAKLVRCGRGRLFDVAVDIRRGSPTYGQWTGVELSHANGRQLLIPEGFAHGFVTRAPETEIIYKCSAHYAPEVDGALRWDSCGIDWGLESPPLLSQKDADAPGLAEFTSPFVARQAQDPRRVEVAQ
SIO_010081: CBW24_RS17680
subclass of: SO_0000673
so part of: CBW24_RS17680
location: complement(51274..51861)
location: region:51274-51861:-1
so has part: feature:51274-51861:-1:exon

WP_097374576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51274-51861:-1:exon

CBW24_RS17685
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17685
old locus tag: CBW24_17655
so part of: sequence
location: 52323..52985
location: region:52323-52985:1
so has part: feature:52323-52985:1:exon
subclass of: SO_0000010

position:52323:1
position: 52323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52985:1
position: 52985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52323-52985:1:exon

CBW24_RS17685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17685
old locus tag: CBW24_17655
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008035348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MFDYSSIALSYDSDPTGADSLLPENRAVYFRLKRVLDILCALVFLPVMIVIGIVLLALNPFFNQGPLLYVQKRMGRNCRAFPAIKFRTMRTATQIVRGADDPLEVHRITRLGWLLRKTRLDELPQILNVLRGDMSMIGPRPDYFHHARRYARVIPGYRARHLVRPGISGLAQVELGYAAGIDATAAKVAADLHYIRHAGYRLDTLIFWRTLVTVVTGRGT
SIO_010081: CBW24_RS17685
subclass of: SO_0000673
so part of: CBW24_RS17685
location: 52323..52985
location: region:52323-52985:1
so has part: feature:52323-52985:1:exon

WP_088664950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52323-52985:1:exon

CBW24_RS17690
type: Gene
subclass of: SO_0000704
RO_0002162: 1411902
locus tag: CBW24_RS17690
old locus tag: CBW24_17660
so part of: sequence
location: 53047..55221
location: region:53047-55221:1
so has part: feature:53047-55221:1:exon
subclass of: SO_0000010

position:53047:1
position: 53047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55221:1
position: 55221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53047-55221:1:exon

CBW24_RS17690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1411902
locus tag: CBW24_RS17690
old locus tag: CBW24_17660
EC number: 2.7.10.2
inference: COORDINATES: protein motif:HMM:TIGR01007.1
GO process: GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis tyrosine autokinase
translation: MQAPMRTMPKLTPAPAMPQAEEGDEIDLLELAGSLWRGKWVILATTFLALTIGAWYAYGVAVPKYAATSSLALQLRKEAVVDLESVVSGVSTETSSINTELEVIRSRGLLEKLVTQLDLTRDPEFNGALRPPSAVARLKGLLRGGDDPAPAPADAPPAPDDAITPEESEMIRTVGAVRRAISATNQRNTYIFNIGATTTDPLKSARIANALAALYIQDQIDVKFQATENAVSWLSERVVELEAELQQKQDLVKERRSSMDVSTVEALEALNQQQRAMGERLAEARLASAREEARLNTLQDLARNGSRAELVAGLDDPALTRLAARLAEGEAGAEDLFADRLALLTQEAENAAARQTQQTAALQASYDRLQTRFDTQSSAVIELQNLERDLNATRTLYETFLTRLKETSVQRGLQQADSRVLSAATPGHYVEPRKSRIMALAMLLGALLGSLIVLARQFLHQGYRTAETLAADTGLAVLGQIPKMPIRRRDQLIDYLNDKPTSPAIEAIRNLRTSVLLSNIDTPPQILLSASSLPGEGKTTQAISLAHNLAGLNKRVLLVEGDIRLRTLWQYFDIPDSRHGLIAAMTGEHDLSDLLLRDSRMDVDILLGEKTSANAADVFSSDRFRNFLEELRHHYDFIVIDTPPVLIVPDARIMSQFADAVVFSVAWDRTAKSQVTEAIRQFHSVNSRVTGLVLSQIDPKGMRRYGYGGKYGAYSSYGAKYYNT
SIO_010081: CBW24_RS17690
subclass of: SO_0000673
so part of: CBW24_RS17690
location: 53047..55221
location: region:53047-55221:1
so has part: feature:53047-55221:1:exon

WP_097374577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53047-55221:1:exon