Candidatus Endomicrobium trichonymphae, complete sequence.
type: Entry
definition: Candidatus Endomicrobium trichonymphae, complete sequence.
sequence version: NC_020419.1
sequence date: 2022-12-30
sequence: sequence
division: CON
label: NC_020419.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00232923
keyword: RefSeq
source: Candidatus Endomicrobium trichonymphae
organism: Candidatus Endomicrobium trichonymphae
taxonomy: Bacteria; Elusimicrobiota; Endomicrobiia; Endomicrobiales; Endomicrobiaceae; Endomicrobium.
reference: 1
references: 18391199
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP009510.1.\n\nOn Feb 28, 2013 this sequence version replaced NS_000191.1.\nThe wood-feeding termite Reticulitermes speratus (Isoptera;\nRhinotermitidae) was collected in Saitama, Japan. The entire gut\nwas removed from a worker termite, and a single cell of the\ncellulolytic protist Trichonympha agilis (Parabasalia;\nTrichonymphida) in the gut was physically isolated by using a\nmicromanipulator. In order to collect the intracellular symbionts\nof T. agilis, as-yet-uncultivated bacteria designated phylotype\nRs-D17 belonging to the candidate division Termite Group 1, the\nhost T. agilis cell was ruptured in buffer and bacterial cells\nwhich leaked out were collected with a glass capillary. These\ncollected cells were directly subjected to isothermal whole genome\namplification. After checking their purity by clone analysis of 16S\nrRNA gene and its adjacent ITS, the complete genome sequence was\ndetermined using ABI 3730 capillary sequencers and a GS20 system.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 00:47:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,200\nCDSs (total) :: 1,150\nGenes (coding) :: 1,141\nCDSs (with protein) :: 1,141\nGenes (RNA) :: 50\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 2\nPseudo Genes (total) :: 9\nCDSs (without protein) :: 9\nPseudo Genes (ambiguous residues) :: 0 of 9\nPseudo Genes (frameshifted) :: 2 of 9\nPseudo Genes (incomplete) :: 4 of 9\nPseudo Genes (internal stop) :: …

sequence
subclass of: SO_0000340
sequence length: 1125857
topology: circular
so has quality: SO_0000988
location: 1..1125857
location: region:1-1125857:1
RO_0002162: 1408204

NC_020419
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00232923
type: BioSample
SIO_000068: biosample

1
title: Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell
author: Hongoh, Y.
author: Sharma, V.K.
author: Prakash, T.
author: Noda, S.
author: Taylor, T.D.
author: Kudo, T.
author: Sakaki, Y.
author: Toyoda, A.
author: Hattori, M.
author: Ohkuma, M.
journal: Proc Natl Acad Sci U S A
volume: 105
issue: 14
pages: 5555-5560
year: 2008
pubmed: 18391199

18391199
type: PubMed
SIO_000068: pubmed

2
title: Revised annotation of the genome of 'Ca. Endomicrobium trichonymphae' phylotype Rs-D17
author: Hongoh, Y.
author: Yoshioka, T.
author: Izawa, K.
journal: Unpublished

3
title: Direct Submission
author: Toyoda, A.
author: Hongoh, Y.
author: Sharma, V.K.
author: Hattori, M.
author: Ohkuma, M.
author: Sakaki, Y.
author: Izawa, K.
author: Yoshioka, T.
journal: Submitted (01-OCT-2007) Contact:Yuichi Hongoh Tokyo Institute of Technology, Department of Life Science and Technology; 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125857:1
position: 1125857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1125857:1:source
so part of: sequence
organism: Candidatus Endomicrobium trichonymphae
mol type: genomic DNA
strain: Rs-D17 genomovar Ri2008
isolation source: a single cell of termite (Reticulitermes speratus) gut protist
host: Trichonympha agilis

1408204
type: Taxonomy
SIO_000068: taxonomy

H0I88_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00005
old locus tag: TGRD_pseudo_1-1
old locus tag: TGRD_RS00005
so part of: sequence
location: 1..723
location: region:1-723:1
so has part: feature:1-723:1:exon
subclass of: SO_0000010

position:723:1
position: 723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-723:1:exon

H0I88_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00005
old locus tag: TGRD_pseudo_1-1
old locus tag: TGRD_RS00005
inference: COORDINATES: protein motif:HMM:NF012529.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA/Hda family protein
translation: MRISVPDLWQKVINNIKLSVTPETYNLWISPIKPLTLENNIFTLEVPNIYFSQWITNNKKNIEQILSDLCGQQIALELKLHQNISDIIKKVEYMPDHEDVRVLIMQKDQINPKYVFSGFVIGASNRFAHGCSEAVAKNPGKQFNPLFLYSGVGLGKTHLLNAIGNHIKQSTPKLKALYVTCEKFVTEFIELIRFDKISFFKSKYRSLVGTKYRPCLMCLIGVFRLYLCLENVCISLDIEY
SIO_010081: H0I88_RS00005
subclass of: SO_0000673
so part of: H0I88_RS00005
location: 1..723
location: region:1-723:1
so has part: feature:1-723:1:exon

WP_095558966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-723:1:exon

H0I88_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00010
old locus tag: TGRD_001
old locus tag: TGRD_RS00010
so part of: sequence
location: 982..2259
location: region:982-2259:1
so has part: feature:982-2259:1:exon
subclass of: SO_0000010

position:982:1
position: 982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259:1
position: 2259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982-2259:1:exon

H0I88_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00010
old locus tag: TGRD_001
old locus tag: TGRD_RS00010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWNEIIEELTKEIPTIWLEGVKEKSYKDNILTLDVPNSTYAERYGTKYKELIQNVIKAKTGKDIGLQCQIELLLEPVMKDEKPKATMTKTPLIKSKEFNDKPYYKNYKEIALVAEETKQIKIKKDNIKKTELTSMPTKYGIENVATFNLFNSKMFTYPNDKRKKAKVSMKIRFNDGTSKEYELYRGQIARHNDTGTGQLTTTHAKIFLAITHIWQEQKSRFANDSYCVVVDTSLTEIAKKLGYKKVSGSDRSRILQKIKEMVYFYMMVSDGVRDCGFSLLNNIIVLDKEDRKENNYKSTIRISISPFVSKQLYDRKIIMRKPQCYKIKNPTAIKFLLCYDKRIVAGNSLRMNISEVANDLEINISTNKSMIIEVLNNALKELNGYELNDIYNLKAEIAKVGKEWIVIAERILKEKTTIIKGELQN
SIO_010081: H0I88_RS00010
subclass of: SO_0000673
so part of: H0I88_RS00010
location: 982..2259
location: region:982-2259:1
so has part: feature:982-2259:1:exon

WP_015423013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:982-2259:1:exon

H0I88_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00015
old locus tag: TGRD_RS05785
so part of: sequence
location: 2709..2846
location: region:2709-2846:1
so has part: feature:2709-2846:1:exon
subclass of: SO_0000010

position:2709:1
position: 2709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846:1
position: 2846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709-2846:1:exon

H0I88_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00015
old locus tag: TGRD_RS05785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTNNKYNKDKPIENAFPINNPFRSSRTVQKALKIINKKVVKKD
SIO_010081: H0I88_RS00015
subclass of: SO_0000673
so part of: H0I88_RS00015
location: 2709..2846
location: region:2709-2846:1
so has part: feature:2709-2846:1:exon

WP_158302751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709-2846:1:exon

H0I88_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00020
old locus tag: TGRD_002
old locus tag: TGRD_RS00015
so part of: sequence
location: 3878..5134
location: region:3878-5134:1
so has part: feature:3878-5134:1:exon
subclass of: SO_0000010

position:3878:1
position: 3878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5134:1
position: 5134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3878-5134:1:exon

H0I88_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00020
old locus tag: TGRD_002
old locus tag: TGRD_RS00015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWNEIITELKEKIPTEWLEPIKEESFKDDILTLAVPDTYYAQKYETDYKSLIQNILKAKTGKAVGLQFQIVASKLLAEPVIKDEKPKTQLMKKTKFNGKPYFKNSAELALVARDAIQVKNIDTQNAELTSMPSKYGIKDVVSFCLFNSKMFTYPNDKRKKVKVSMDVRFSNGTLKTFDLYRGQITFNDVGRGQLTTTHAKIFLAIIHIWQEQGCKFADNKGFYAVVDISMRELAKRLGYQKLSGADVKRLTVLTNDLVDFPMILSDGYTAYTFTFLFDVVTRTFKKSRSNRTMLRLTINPFISKQFYDRKVFLRNPQCYKIKNPTAIKFLLCYDKRIVKGNGLKLNISEVANDLEILTEQKSIVAEHLGNAFQELNGYELNDRYRLYVELVKEEREWIVVAERILKEKTTIIKSELQN
SIO_010081: H0I88_RS00020
subclass of: SO_0000673
so part of: H0I88_RS00020
location: 3878..5134
location: region:3878-5134:1
so has part: feature:3878-5134:1:exon

WP_015423014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3878-5134:1:exon

H0I88_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00025
old locus tag: TGRD_003
old locus tag: TGRD_RS00020
so part of: sequence
location: 6071..6520
location: region:6071-6520:1
so has part: feature:6071-6520:1:exon
subclass of: SO_0000010

position:6071:1
position: 6071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6520:1
position: 6520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6071-6520:1:exon

H0I88_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00025
old locus tag: TGRD_003
old locus tag: TGRD_RS00020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKKAVCVYLTLVLFLTGCGNLKSQIRGNQNTDASADQPTGNIIKSDNNEIIEKEETKKLDDKVIGLVVVGDEKEKTSSKEPELMWQDKTKKYAGDAGHFLYEHKGKIAFAVVVATSVYWFGIRPINGLPAQPEVLQLRQRQALQQYQ
SIO_010081: H0I88_RS00025
subclass of: SO_0000673
so part of: H0I88_RS00025
location: 6071..6520
location: region:6071-6520:1
so has part: feature:6071-6520:1:exon

WP_015423015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6071-6520:1:exon

H0I88_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00030
old locus tag: TGRD_RS05790
so part of: sequence
location: 6695..6838
location: region:6695-6838:1
so has part: feature:6695-6838:1:exon
subclass of: SO_0000010

position:6695:1
position: 6695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6838:1
position: 6838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6695-6838:1:exon

H0I88_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00030
old locus tag: TGRD_RS05790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTDNKDNKDKDKPIGNAFPINNPFRSSRTVQKALKIINKKVVKKD
SIO_010081: H0I88_RS00030
subclass of: SO_0000673
so part of: H0I88_RS00030
location: 6695..6838
location: region:6695-6838:1
so has part: feature:6695-6838:1:exon

WP_158302752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6695-6838:1:exon

H0I88_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00035
old locus tag: TGRD_RS05760
so part of: sequence
location: 6847..7113
location: region:6847-7113:1
so has part: feature:6847-7113:1:exon
subclass of: SO_0000010

position:6847:1
position: 6847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7113:1
position: 7113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6847-7113:1:exon

H0I88_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00035
old locus tag: TGRD_RS05760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIIKFKKIFAVILMLSVFLSGCQRQVITGISKNENDVSTSTNTPAPEDYAYYSVLALVISIVYACSYFTRRLRLKTNSKKWRCYARH
SIO_010081: H0I88_RS00035
subclass of: SO_0000673
so part of: H0I88_RS00035
location: 6847..7113
location: region:6847-7113:1
so has part: feature:6847-7113:1:exon

WP_145971068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6847-7113:1:exon

H0I88_RS05875
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05875
so part of: sequence
location: 7272..7667
location: region:7272-7667:1
so has part: feature:7272-7667:1:exon
subclass of: SO_0000010

position:7272:1
position: 7272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7667:1
position: 7667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272-7667:1:exon

H0I88_RS05875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05875
inference: COORDINATES: protein motif:HMM:NF012529.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA/Hda family protein
translation: MIDDIQFLVGKEGSQEEFFHMFNSLKKQIVISSDRPPKDLKDVEERLISRFEWGIIADIQPPDLETRIAILRKKSEEEKIYIPDDVILHIATQIKSNIRQLEGSLLRITAFFSIYRNTFNCGFRTKNAQNH
SIO_010081: H0I88_RS05875
subclass of: SO_0000673
so part of: H0I88_RS05875
location: 7272..7667
location: region:7272-7667:1
so has part: feature:7272-7667:1:exon

WP_172412791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7272-7667:1:exon

H0I88_RS05880
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05880
so part of: sequence
location: 7651..7851
location: region:7651-7851:1
so has part: feature:7651-7851:1:exon
subclass of: SO_0000010

position:7651:1
position: 7651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7851:1
position: 7851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7651-7851:1:exon

H0I88_RS05880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05880
inference: COORDINATES: protein motif:HMM:NF019903.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLKIIRINNSEHITIENIQKAISDDFNIEIKDMKSKRRTDAVAFPRQIAMYLARMLTDEFSTNAIS
SIO_010081: H0I88_RS05880
subclass of: SO_0000673
so part of: H0I88_RS05880
location: 7651..7851
location: region:7651-7851:1
so has part: feature:7651-7851:1:exon

WP_198407702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7651-7851:1:exon

H0I88_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaN
locus tag: H0I88_RS00045
old locus tag: TGRD_004
old locus tag: TGRD_RS00030
so part of: sequence
location: 8206..9327
location: region:8206-9327:1
so has part: feature:8206-9327:1:exon
subclass of: SO_0000010

position:8206:1
position: 8206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9327:1
position: 9327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8206-9327:1:exon

H0I88_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaN
locus tag: H0I88_RS00045
old locus tag: TGRD_004
old locus tag: TGRD_RS00030
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKVICEKEELMRGIQMVSPVTPSKNTLPALSNILFEAERDKIKLSSTDLEIAVQCYIKGEITEDGGITIPSKRFANIIKELSTDDEIEIKADETNQINIKSGKSKFNLMGISKTEYPVIPEPPKNNNFTIKRGIFASMLKKIVFAASRDSQRYVLNGIYFILGDSKLTMVATDGRRLAYAKTNITQAEVKGKAIVPTKAVNDILRLLYSDINSEDMRIGISDNRISAEIDDITLLSTLIEGVFPNYEQVIPKKSDLKIKLNVKNTLTAVKQMALLTDNHLSSDRSSAVKFYFSQDLLKISASSAGIGSGETDLEIEYKNDPAEINFNPDFIKEIFQSIDEYSAIFEFTNSLNPAVIYPETDENYLCVVMPMRV
SIO_010081: H0I88_RS00045
subclass of: SO_0000673
so part of: H0I88_RS00045
location: 8206..9327
location: region:8206-9327:1
so has part: feature:8206-9327:1:exon

WP_015423016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8206-9327:1:exon

H0I88_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00050
old locus tag: TGRD_RS00035
so part of: sequence
location: 9330..9602
location: region:9330-9602:1
so has part: feature:9330-9602:1:exon
subclass of: SO_0000010

position:9330:1
position: 9330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9602:1
position: 9602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9330-9602:1:exon

H0I88_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00050
old locus tag: TGRD_RS00035
inference: COORDINATES: protein motif:HMM:NF017103.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DciA family protein
translation: MSWTRSEEIISLLKKKLGLDEDFFIVRKSWEKEIAISGIEISGYKSGTIFAQTQSSTASFELTARKKEIIKKLNQYIGSSKIKNIKVEIK
SIO_010081: H0I88_RS00050
subclass of: SO_0000673
so part of: H0I88_RS00050
location: 9330..9602
location: region:9330-9602:1
so has part: feature:9330-9602:1:exon

WP_095558626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9330-9602:1:exon

H0I88_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gyrB
locus tag: H0I88_RS00055
old locus tag: TGRD_005
old locus tag: TGRD_RS00040
so part of: sequence
location: 9654..12146
location: region:9654-12146:1
so has part: feature:9654-12146:1:exon
subclass of: SO_0000010

position:9654:1
position: 9654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12146:1
position: 12146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9654-12146:1:exon

H0I88_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gyrB
locus tag: H0I88_RS00055
old locus tag: TGRD_005
old locus tag: TGRD_RS00040
EC number: 5.6.2.2
inference: COORDINATES: protein motif:HMM:NF011501.0
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MANKEVKNESSEKDGYSASNIQILEGLEAVRKRPAMYIGSTGSQGLHHLVYEVVDNSIDEVLAGYCKNIDVTVHSDNSITVLDDGRGIPVDPHPDPKFKGVSALEIVLTKLHAGGKFDKNSYKVSGGLHGVGVSCVNALSDLLKAEVYRNGKVYVQNYSKGKPLCPVKESGVTEERGTKVTFHPDPEIFSVMKYSFDTLANRLRELAFLNAGTRIRISDERDDDKEHIFDYNGGIKTFVQYLNTNKNVINKDPIYFVKEKDDVYVEIAMQYNDSYNELIFTFVNNINTVEGGTHLSGFRSALTRSVNEYIKKNEVSKIKDLKLSGEDVREGLTAIISIKVQDPQFEGQTKTRLGNSEVEGIMQSVVGDALTTFLEENPGIASQILDKAINAAEAREAARKARELTRRKGALDSASLPGKLADCSERDPQKTELFIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKSRLTKILANDEIRTLITAIGAGIGKEEQDFNINKVRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPQLLDRGYIYIAQPPLYKVRRNKREMYLDSEEELDKFLFQQALDGLSMSLIRDGVEVKEIDYKSLHKIVANISELDILLKKLWKKGVSWKEYLRFKKEGKLPLYRAMKDGSVKYIYSDKEWKEFKDPLLEKRRELLASQGELDEITENLKTDEVMPEYKDLWELPRVDNLAEQLEEEGLHPEHYSETHAKPVYRLQDTEKKVQGEIYELYSTTELIETIRELGNKGATIQRYKGLGEMNPEQLWETTMDIKNRKLLQITLEDAIETDRVFTTLMGDQVEPRRLFIQTHALDVRNLDI
SIO_010081: H0I88_RS00055
subclass of: SO_0000673
so part of: H0I88_RS00055
location: 9654..12146
location: region:9654-12146:1
so has part: feature:9654-12146:1:exon

WP_015423017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9654-12146:1:exon

H0I88_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gyrA
locus tag: H0I88_RS00060
old locus tag: TGRD_006
old locus tag: TGRD_RS00050
so part of: sequence
location: 12928..15435
location: region:12928-15435:1
so has part: feature:12928-15435:1:exon
subclass of: SO_0000010

position:12928:1
position: 12928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15435:1
position: 15435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12928-15435:1:exon

H0I88_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gyrA
locus tag: H0I88_RS00060
old locus tag: TGRD_006
old locus tag: TGRD_RS00050
EC number: 5.6.2.2
inference: COORDINATES: protein motif:HMM:TIGR01063.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MPKEKNIKDEQEILPVSIVPRNIEDEMKNSYIDYAMSVIVGRALPDVRDGLKPVHRRILYAMKEMGLKHNTAYKKSARIVGDVLGKYHPHGDSAVYGAMVRMVQDFSLRYPMIDGQGNFGSIDGDFAAAMRYTEVRMDTITDEMLVDLDKNTVDFIPNYDGSLKEPVILPTKLPSLLINGSAGIAVGMATNIPAHNIVEVSDALVTLIDDKEISVSEIVKYIKGPDFPTGAIILGKSGIKDYMEKGRGSVKIRAKTEIEEVKSGREAIIVNEIPYQVNKANLITSIADLVKDKKIDGIADLRDESDRDGIRIVIEIKRDANVQVVLNQLYKHTQMQLSFGVIMLALVNNRPKVMNVKEILIHHIEHRKVIIIRRTKFDLQKAEARFHILEGLKIAIDNIDAVIKIIKESADEDNARVSLMSKLRLTKIQTEAILEMKIRQLTGLKRKEIDDEYLELIRLIEKLRSVLADPKKVLDIIKNEALDIKRKYGDKRRTQIQAAEADFNIEDLIQEEEVAVTMSHAGYIKRIPLDTYKAQHRGGRGIAAMNTREEDFVENLFITSSHSYMLFFTTRGRLYWMRIYEIPEGARTSKGKAIVNLLQLQGTEEKITAAIPIRSFNPEYTKDEYLLMCTRNGIIKKIALDKFINPRKRGIIAIKLEDGDILTEVKAINKNPEVVIATKKGSSIRFKESDIRVIGRAGRGVKGIELKKGDEVIGMEVFSPDDVFLSISENGYGKRTKVGKYRLQKRAGHGVINMQMSERNGNMIGIKKANDGEEVMIITQNGITIRLRVNSISVIGRNTQGVRLVRLDAGDKVAAIACVVKDENSEEPQCYCKES
SIO_010081: H0I88_RS00060
subclass of: SO_0000673
so part of: H0I88_RS00060
location: 12928..15435
location: region:12928-15435:1
so has part: feature:12928-15435:1:exon

WP_015423018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12928-15435:1:exon

H0I88_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00065
old locus tag: TGRD_007
old locus tag: TGRD_RS00055
so part of: sequence
location: complement(15723..17126)
location: region:15723-17126:-1
so has part: feature:15723-17126:-1:exon
subclass of: SO_0000010

position:15723:-1
position: 15723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17126:-1
position: 17126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15723-17126:-1:exon

H0I88_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00065
old locus tag: TGRD_007
old locus tag: TGRD_RS00055
inference: COORDINATES: protein motif:HMM:NF012544.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid permease
translation: MKQPQEGNLKRKLKNRHIQFIVIGGAIGTGLFLGTGEAIFKAGPAVILGYLIAGISIFLTMRQLGEMETEEPMTGSFSYFAYKYWGKFPGFLSGWNYWIQYVLVGIAELTAVAAYAQYWFPTLATWKTALLFFILINAINLTAVKAYAEIEFWFSIIKVTAICAMILAGGYILIINPGLVDGATIKNLWMAATIGEHTGDPALSGFFPHGIIGLLAAIPMITFAFGGLELIGITAAETADPQKTIPKAVNQVVFRILFFYIGSIIVLLALYHWSNLHTTDSPFVMIFDKTGFKHAAWALNFVILSAALSVYNSCIYSNSRTLYGLALQNNAPQIFAKTTKKGVPVAAQMLSGVLTFLVVPLNYFMPNWVDAFQTVISFVVVCILINWGLIAMSHIKFKKQKNLENHKTLFPSPLYPYTNYLIFAFILFILIVMAKFCGCTRQTIAVPLWILIVYALYKVQNIRNEKS
SIO_010081: H0I88_RS00065
subclass of: SO_0000673
so part of: H0I88_RS00065
location: complement(15723..17126)
location: region:15723-17126:-1
so has part: feature:15723-17126:-1:exon

WP_015423019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15723-17126:-1:exon

H0I88_RS06340
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06340
so part of: sequence
location: 17909..18031
location: region:17909-18031:1
so has part: feature:17909-18031:1:exon
subclass of: SO_0000010

position:17909:1
position: 17909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18031:1
position: 18031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17909-18031:1:exon

H0I88_RS06340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMVKASEKLEENLATKEIIEADNKAERMIKKDKSLINRHI
SIO_010081: H0I88_RS06340
subclass of: SO_0000673
so part of: H0I88_RS06340
location: 17909..18031
location: region:17909-18031:1
so has part: feature:17909-18031:1:exon

WP_269457763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17909-18031:1:exon

H0I88_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00070
old locus tag: TGRD_RS05795
so part of: sequence
location: 18560..18709
location: region:18560-18709:1
so has part: feature:18560-18709:1:exon
subclass of: SO_0000010

position:18560:1
position: 18560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18709:1
position: 18709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18560-18709:1:exon

H0I88_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00070
old locus tag: TGRD_RS05795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKAIAFRNAANKIVDKNIEYSITKKEMDIDNYPESELLVIIKRIIRFT
SIO_010081: H0I88_RS00070
subclass of: SO_0000673
so part of: H0I88_RS00070
location: 18560..18709
location: region:18560-18709:1
so has part: feature:18560-18709:1:exon

WP_158302753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18560-18709:1:exon

H0I88_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00075
old locus tag: TGRD_008
old locus tag: TGRD_RS00065
so part of: sequence
location: complement(18880..23136)
location: region:18880-23136:-1
so has part: feature:18880-23136:-1:exon
subclass of: SO_0000010

position:18880:-1
position: 18880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23136:-1
position: 23136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18880-23136:-1:exon

H0I88_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00075
old locus tag: TGRD_008
old locus tag: TGRD_RS00065
inference: COORDINATES: protein motif:HMM:NF017828.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydratase activase-related protein
translation: MNAFYKQGNQLEYELGSAGIDIGSTTVKLSILNKNNEPIYCNYKRHQSDLLNTIISLIDETPEKLKTTNLTICTTGSGAIDLSRKANIYFEQEVIACTKAIKTFLPKVDVAIELGGEDAKITFFDNASTDQRMNETCAGGTGAFIDQMAQTLKTDAAGINKLSKNHKTVYPIAARCGVFAKTDIMPLLNDGVSKEDIAASILQAVVNQTIGGLARGHTIRGNVCFLGGPLFFLSELRNFFIKSLKLKPENVFSPDNAHFFVSFGAALLGKGDKITLKSLKEKFKSLKYKPLRSASEVLPPLFVNEKDYEMFIRRHNETPAVKVKDVEGDLFLGVDAGSTTTKSVLINKDKAIAYSYYGSNDGTPLQSAINVLKNIYEELPRKAHIAGACITGYGEALIKAALNFDHGEVETIAHYKAAYYFNPKVSFILDIGGQDMKCIYVKNGLIDKIALNEACSSGCGSFVQSCAKSMNYELQDFAQLALFAKKPADLGSRCTVFMNSKIKQVQKEGTSAGNISAGLDYSIIKNALYKVIKINNPEELGGHIVVQGGTFFNNGVLRATEILLKTEVIRPNIAGLMGAFGSAIIAMQNKKYSTSLISKEKLAGFVCKMRNTRCKGCENKCLLNITVFPNGKTFISGNRCENVLQNKKEQSFAFNMFDYKYKRLFSYYKPLPLEKAPRGEIGIPRVLNMYENYPFWFAFFTKLGFRVVLSDQSSNVLFNSGLDTISSQTVCFPAKMVHGHIENLVEKGIKIIFYPCIPYEVEEFKDVANHYNCPIVGSYPEVIRLNMSALEEKGIKFLQPFLPFDNIKRLIYRLAEELKDFNITKKNLVFAILRARAALNLFKKDIRKRGTVLIREIKETKKPAVILAGRPYHIDPAINHGIADLIASYKVIVLSEDSVANLSGPLPKISFVDQWMYHSRLYRAANLATKIDSLELIQLNSFGCGLDAITMEQTEEILSKSGKIYTVLKIDEGSNLGAAKIRIRSLLAAIKERKGLKFKDTIFEGTKVSKFSEFTKDMKDSHTILCPQMSPVHFRLAGSVMRNYGIKLEVLPEVNKADIEEGLRYVNNDACYPTIVVVGQLINALKSGRYDINKTAMIISQTGGGCRATNYASFLRKAAEKAGFKNVPVISLSTTDSSLNKSLGISFSMLKDTLLILLYGDLLMRLSNRMRPYEVHSGQTDALVETWLMRLSDRIGKTLYFDFKNTVKKIVKDFDGIVAQKVKKPRVGIVGEILVKFHPYANNNLVSVLEKEEAEIVVPDMTDFINYCILDDIYKHKYLAGSFKNKVMSLIASSYIERLRSGIRKTLKKSKHFHSYQTTKDLAHKASDIISVCNQTGEGWLLTAEMLELIEDGVKNIVCVQPFGCLPNHITGKGVMKELKRRYNDINIISVDYDPGVSEVNQINRIKLLMSVARQNIN
SIO_010081: H0I88_RS00075
subclass of: SO_0000673
so part of: H0I88_RS00075
location: complement(18880..23136)
location: region:18880-23136:-1
so has part: feature:18880-23136:-1:exon

WP_095558628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18880-23136:-1:exon

H0I88_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00080
old locus tag: TGRD_RS00070
old locus tag: TGRD_tRNA01
so part of: sequence
location: 23299..23371
location: region:23299-23371:1
so has part: feature:23299-23371:1:exon
subclass of: SO_0000663

position:23299:1
position: 23299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23371:1
position: 23371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23299-23371:1:exon

H0I88_RS00080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00080
old locus tag: TGRD_RS00070
old locus tag: TGRD_tRNA01
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:23332..23334,aa:Val,seq:tac)
SIO_010081: H0I88_RS00080
subclass of: SO_0000673
so part of: H0I88_RS00080
location: 23299..23371
location: region:23299-23371:1
so has part: feature:23299-23371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23299-23371:1:exon

H0I88_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: def
locus tag: H0I88_RS00085
old locus tag: TGRD_009
old locus tag: TGRD_RS00080
so part of: sequence
location: 24367..24873
location: region:24367-24873:1
so has part: feature:24367-24873:1:exon
subclass of: SO_0000010

position:24367:1
position: 24367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24873:1
position: 24873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24367-24873:1:exon

H0I88_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: def
locus tag: H0I88_RS00085
old locus tag: TGRD_009
old locus tag: TGRD_RS00080
EC number: 3.5.1.88
inference: COORDINATES: protein motif:HMM:NF001159.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MAKLKIKKYGDPALRKRAEAVSEINEIIKELASDMLETMYSASGVGLAAPQVGILLRFCVIDVDPNKKSPIVMINPEIISGENKITAEEGCLSFPGFYGNVNRFENIIAGYTDLNGNRQEIKAQNFLAKALQHEIDHLDAKLFIDYLPDWKRESIEKKIKRKKKAGDW
SIO_010081: H0I88_RS00085
subclass of: SO_0000673
so part of: H0I88_RS00085
location: 24367..24873
location: region:24367-24873:1
so has part: feature:24367-24873:1:exon

WP_015423021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24367-24873:1:exon

H0I88_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: fmt
locus tag: H0I88_RS00090
old locus tag: TGRD_010
old locus tag: TGRD_RS00085
so part of: sequence
location: 24870..25808
location: region:24870-25808:1
so has part: feature:24870-25808:1:exon
subclass of: SO_0000010

position:24870:1
position: 24870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25808:1
position: 25808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24870-25808:1:exon

H0I88_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: fmt
locus tag: H0I88_RS00090
old locus tag: TGRD_010
old locus tag: TGRD_RS00085
EC number: 2.1.2.9
inference: COORDINATES: protein motif:HMM:TIGR00460.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MRILFFGTAFISETYLKELHKKCHEIFVVTTPDKPALRGQKLIYPAVKVYAVKNNISFIQPEKFTLDVIETIKNFAADTGVAVAYGKLIPKVVFDIPKYKTFNIHFSLLPKYKGAAPVQHALCRGETETGISSFYIEEGLDTGGIIIQEKLNISIKDNAETLLNKLILLGIDVMNKTLELFRCGKCDAASQTGDPSFAPSLKKIDGLVNWNKRAGEIYNQFRGLYLWPGIYSTISQGKLVGKRIKFREIEVFDSDSINKDSGIVYSAEKNRGFTVSCAVGRILVVKMQSENKPVVSAWDFIQGRQISAGDRF
SIO_010081: H0I88_RS00090
subclass of: SO_0000673
so part of: H0I88_RS00090
location: 24870..25808
location: region:24870-25808:1
so has part: feature:24870-25808:1:exon

WP_015423022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24870-25808:1:exon

H0I88_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trxA
locus tag: H0I88_RS00095
old locus tag: TGRD_011
old locus tag: TGRD_RS00090
so part of: sequence
location: 26002..26334
location: region:26002-26334:1
so has part: feature:26002-26334:1:exon
subclass of: SO_0000010

position:26002:1
position: 26002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26334:1
position: 26334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26002-26334:1:exon

H0I88_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trxA
locus tag: H0I88_RS00095
old locus tag: TGRD_011
old locus tag: TGRD_RS00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005344840.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MAVEINKNNFAQEVLSSDKPVLVDFWAPWCNPCKMLSPIIEELAAEYEDSVKVGKVNTDENMSLSAKFQIVSIPCLILFKNGKTLHKTVGFRSKNDIKKIIDSALMVGDE
SIO_010081: H0I88_RS00095
subclass of: SO_0000673
so part of: H0I88_RS00095
location: 26002..26334
location: region:26002-26334:1
so has part: feature:26002-26334:1:exon

WP_015423023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26002-26334:1:exon

H0I88_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00100
old locus tag: TGRD_RS00100
so part of: sequence
location: 26613..26870
location: region:26613-26870:1
so has part: feature:26613-26870:1:exon
subclass of: SO_0000010

position:26613:1
position: 26613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26870:1
position: 26870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26613-26870:1:exon

H0I88_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00100
old locus tag: TGRD_RS00100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPVLPIVYKEQDIDKYYNPRFIKENFVKEFVNDLLFQLFKISDFRLVDIAHSDRVWKKYFDKQEKHHKTEMLLEEIIDEYVSKI
SIO_010081: H0I88_RS00100
subclass of: SO_0000673
so part of: H0I88_RS00100
location: 26613..26870
location: region:26613-26870:1
so has part: feature:26613-26870:1:exon

WP_095558632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26613-26870:1:exon

H0I88_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00105
old locus tag: TGRD_RS00105
so part of: sequence
location: 26848..27072
location: region:26848-27072:1
so has part: feature:26848-27072:1:exon
subclass of: SO_0000010

position:26848:1
position: 26848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27072:1
position: 27072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26848-27072:1:exon

H0I88_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00105
old locus tag: TGRD_RS00105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTYPKFKVFTSDDPSKLDREESLILKESTYFPKDKTAQIIALKSLKSRNFKDLSFTNYLSSNECKEYNIFKKV
SIO_010081: H0I88_RS00105
subclass of: SO_0000673
so part of: H0I88_RS00105
location: 26848..27072
location: region:26848-27072:1
so has part: feature:26848-27072:1:exon

WP_095558633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26848-27072:1:exon

H0I88_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trxB
locus tag: H0I88_RS00115
old locus tag: TGRD_012
old locus tag: TGRD_RS00110
so part of: sequence
location: 27703..28611
location: region:27703-28611:1
so has part: feature:27703-28611:1:exon
subclass of: SO_0000010

position:27703:1
position: 27703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28611:1
position: 28611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27703-28611:1:exon

H0I88_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trxB
locus tag: H0I88_RS00115
old locus tag: TGRD_012
old locus tag: TGRD_RS00110
EC number: 1.8.1.9
inference: COORDINATES: protein motif:HMM:TIGR01292.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MIYDVIIIGGGPAGLSAAIYASRARLKTLIIEKTGCGGQMTTTDLLENYPGFNGGINGFELAVKLEKQARDFGAEIIYDEVGAIEQGLSKKVITANSAYETKTVIIAAGTYAKKMNIPGESEFMGRGVSFCAVCDAPFYRDKNVLVVGGGDSAIEEAAYISKFAKNVTVVHRRDKLRAAKILQERMKLHPNISVIYDSVPKEIFGSDSVEKVTITNVKTNESKGLIIDGVFVFTGLIPNTLFLSGVALDKTGYIITDEDMNTSSTGIFACGDIRKKQLRQVVTAASDGAQAAVSAQRCIENL
SIO_010081: H0I88_RS00115
subclass of: SO_0000673
so part of: H0I88_RS00115
location: 27703..28611
location: region:27703-28611:1
so has part: feature:27703-28611:1:exon

WP_015423024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27703-28611:1:exon

H0I88_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: polA
locus tag: H0I88_RS00120
old locus tag: TGRD_013
old locus tag: TGRD_RS00115
so part of: sequence
location: 28608..31334
location: region:28608-31334:1
so has part: feature:28608-31334:1:exon
subclass of: SO_0000010

position:28608:1
position: 28608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31334:1
position: 31334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28608-31334:1:exon

H0I88_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: polA
locus tag: H0I88_RS00120
old locus tag: TGRD_013
old locus tag: TGRD_RS00115
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004397.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006261 - DNA-templated DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MKKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPSKNFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGNNKGSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALMGDASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKGNMGKLLSHGKEQALLSRKLIELNRRVPLDYKLGEFESKDIDAGKAVSFFEKYEFKSLLAKYSVKEHELQFPVILNETHRNEEAGSGSFVTDKPVFEVVNSQERAAEVAEKIEQAGIFALKTVRSTLDSLKTRIVGISLCVENKAFYFPIGHNDLTARQVIFEDFKDIFAPLFFSDKIKKIGHDLKQERNIYSMSGVGLNNIYFDIMLASYCLNPAKSHCITDMSKEYLDFTAGVGSYAWKGSKKSSFANSSIEAGAKYANSISAAVFAIYKIFDFQIKEKKLSLLFFDTEMSLVEILSEMEISGIKVDLPFLRNFNEKIVYELKIIENNIYKIAGIEFNINSQKQLSSVMFEKLNLPVIKKTKTGYSTDEEVLVELSSHEFPAEILKYRELQKLKSTYIDPLTDYCVYYGSRIHTIFNQAVTTTGRLSSTEPNLQNIPVKSAYGKEFRKAFVPERNKIFISADYSQIDLRVLAHISQDTKFIEAFKAGTDIHSATAREIFNIPEGYPLTDSLRSAAKSINFGIIYGMSPFGLSKQLNIPFGKAKEYIDGYFERYDKVKFWMEQIVKQASEDGYVRTITGRIRYIPELRSTNAQVRKAGERMALNTPVQGSSADIIKIAMISVYNEIKLKGYKSLMLLQVHDDLLFEVPDGESENMISIIKNKMENPLHLSIPIVVDIKAGRNWGEMKKI
SIO_010081: H0I88_RS00120
subclass of: SO_0000673
so part of: H0I88_RS00120
location: 28608..31334
location: region:28608-31334:1
so has part: feature:28608-31334:1:exon

WP_015423025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28608-31334:1:exon

H0I88_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: coaE
locus tag: H0I88_RS00125
old locus tag: TGRD_014
old locus tag: TGRD_RS00120
so part of: sequence
location: 31331..31930
location: region:31331-31930:1
so has part: feature:31331-31930:1:exon
subclass of: SO_0000010

position:31331:1
position: 31331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31930:1
position: 31930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31331-31930:1:exon

H0I88_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: coaE
locus tag: H0I88_RS00125
old locus tag: TGRD_014
old locus tag: TGRD_RS00120
EC number: 2.7.1.24
inference: COORDINATES: protein motif:HMM:TIGR00152.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MIIGLTGGIAAGKSESAKYFESLGACAIDADVIAHELTAKGMPALDELSKSFGGSILLSSGDLNRKKLADIIFSDEKAKLRIEKIIHSHIISRINEIISQNIMRSNIVIDAPLLFEVGLDRICDKSAVVRVSYNIQVERLVLRDKLNADQAKRRISSQMPMEKKVELADFVIDNSGSKENLKKRVKDLYKLLTSEVKII
SIO_010081: H0I88_RS00125
subclass of: SO_0000673
so part of: H0I88_RS00125
location: 31331..31930
location: region:31331-31930:1
so has part: feature:31331-31930:1:exon

WP_015423026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31331-31930:1:exon

H0I88_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rho
locus tag: H0I88_RS00130
old locus tag: TGRD_015
old locus tag: TGRD_RS00125
so part of: sequence
location: 32117..33388
location: region:32117-33388:1
so has part: feature:32117-33388:1:exon
subclass of: SO_0000010

position:32117:1
position: 32117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33388:1
position: 33388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32117-33388:1:exon

H0I88_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rho
locus tag: H0I88_RS00130
old locus tag: TGRD_015
old locus tag: TGRD_RS00125
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MDVSVLSKRTMAELIEIAKSFKVDSVAGLRKQELIAKIFEAQTKENKSVYDEGVLEILPDGFGFLRSPDYNYLPGPDDIYISPSQIKKFALRKGDTVAGYVRPPQSQQERYFALLQVRSINGQENLENIRDRDLFDNLTPLYPDEKMVLETKKEEISMRIIDMLVPIGKGQRVLINAAPRTGKTVLLQKIANAVTKNNPDIVLMVLLIDERPEEVTDMQRSVKGEVISSTFDEPSDRHIQVAEMVIEKAKRIVENGKHVVVLLDSITRLARAYNTAMPSSGRILSGGLDSNALQRPKRFFGAARNIEEGGSLTIIGTALVETGSRMDDVIFEEFKGTGNCEIYLDRKLADRRIFPSIDLLRSGTRKEELLLSEDEKNKMWILRKWMNSMNSIEVMEELSKRLLNSKSNKDFLKQMELSSMERL
SIO_010081: H0I88_RS00130
subclass of: SO_0000673
so part of: H0I88_RS00130
location: 32117..33388
location: region:32117-33388:1
so has part: feature:32117-33388:1:exon

WP_095558968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32117-33388:1:exon

H0I88_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00135
old locus tag: TGRD_016
old locus tag: TGRD_RS00130
so part of: sequence
location: 33481..34038
location: region:33481-34038:1
so has part: feature:33481-34038:1:exon
subclass of: SO_0000010

position:33481:1
position: 33481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34038:1
position: 34038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33481-34038:1:exon

H0I88_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00135
old locus tag: TGRD_016
old locus tag: TGRD_RS00130
inference: COORDINATES: protein motif:HMM:NF024671.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Panacea domain-containing protein
translation: MNLEKIIQIVNYVLQKYDFSLNYTKLLKLLYIADRECLDRWNFTISEDNYAAMKQGMVLSGLYDFIRGNADKLSQVKWDSYFYRDNYDLRSRHRENCSYDELSEAEKEMLDEVDKKYHFKSWDYLVNEVVHKFPEWKEVEAEIGNSSLKIEKEKILSVLDRDEREIKEIISSENAYEKCKNDLKG
SIO_010081: H0I88_RS00135
subclass of: SO_0000673
so part of: H0I88_RS00135
location: 33481..34038
location: region:33481-34038:1
so has part: feature:33481-34038:1:exon

WP_015423028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33481-34038:1:exon

H0I88_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00140
old locus tag: TGRD_RS00135
old locus tag: TGRD_tRNA02
so part of: sequence
location: 34638..34727
location: region:34638-34727:1
so has part: feature:34638-34727:1:exon
subclass of: SO_0000663

position:34638:1
position: 34638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34727:1
position: 34727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34638-34727:1:exon

H0I88_RS00140
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00140
old locus tag: TGRD_RS00135
old locus tag: TGRD_tRNA02
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:34672..34674,aa:Ser,seq:tga)
SIO_010081: H0I88_RS00140
subclass of: SO_0000673
so part of: H0I88_RS00140
location: 34638..34727
location: region:34638-34727:1
so has part: feature:34638-34727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34638-34727:1:exon

H0I88_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00145
old locus tag: TGRD_pseudo_5
old locus tag: TGRD_RS00140
so part of: sequence
location: complement(34837..37155)
location: region:34837-37155:-1
so has part: feature:34837-37155:-1:exon
subclass of: SO_0000010

position:34837:-1
position: 34837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37155:-1
position: 37155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34837-37155:-1:exon

H0I88_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00145
old locus tag: TGRD_pseudo_5
old locus tag: TGRD_RS00140
inference: COORDINATES: protein motif:HMM:NF016724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSIAIKEGVVKNLEITYEHFQELYGNTPADFQVYDSSKVSAVRGFADSNNIQILVINIDSFAKDENIVNRPNDKLTGKQPIEFIQNVNPIVIVDEPQNMETDIRKRAVERLNPACTLRYSATHRNLYNLVYSLNPVKAFELGLVKQIEVDSVTTEHNHNNAFIELLRFKQNKNSIRAEVKIERETAAGIKPKTVSIGIDADEKYNLFKLSGKREIYRNGFIPIEMNIAEKFVEFENGRRIYSSGQNNSRIQDEITKTQIERTIMEHLQKEKSFKTQKIKVLSLFFIDRVANYRSYDENGNIIKGKIFKWFEYIYNQTVSNPDYRGIIPFELKDIHNGYFSQDKKGHLTDSSESRETKADMDTYRLIMKDKEKLLDINNPLRFIFSHSALREGWDNPNVFQICTLNESHSEMKKRQEIGRGLRLAVNAEGKRIYDNNINKLTFISNEAYVDFVKSLQKEIEKDCGVDFSEKIKNKRNRKKVTLKKGFELDAKFKELWDKIKHKTAYRVNYETEKLVSEAGKDLKEIEDEIKAPIIRTVKSDINLTEERVSAAMKGIASKSVQCSFEIPNIIDYIQNKLNAKLTRKTIVEIVTCSGRTADILKNPQMFLDLAVNKINSVINKLMTDGIKYEKIAGREWQMQLFKDNEIETYIENLYAVKNQSKTITDSIVINSLSDPEKQFAEDCDSNDNIDFFIKLPYWFKIMTPLGNYNPDWALIYKNDKRIYFVAETKSKLNLDKLRTEEKLKIKCGKAHFKAFTDVRFKTVKNIEDLIS
SIO_010081: H0I88_RS00145
subclass of: SO_0000673
so part of: H0I88_RS00145
location: complement(34837..37155)
location: region:34837-37155:-1
so has part: feature:34837-37155:-1:exon

WP_232501224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34837-37155:-1:exon

H0I88_RS05885
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05885
so part of: sequence
location: complement(37161..37409)
location: region:37161-37409:-1
so has part: feature:37161-37409:-1:exon
subclass of: SO_0000010

position:37161:-1
position: 37161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37409:-1
position: 37409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37161-37409:-1:exon

H0I88_RS05885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHFDAGQPHQQEAVKAVTEIFKGQPVNNGDFEVSFGGQDGLNLLVKGVKNNIVLSEEQILKNIREIQIMNSINNTVLKNS
SIO_010081: H0I88_RS05885
subclass of: SO_0000673
so part of: H0I88_RS05885
location: complement(37161..37409)
location: region:37161-37409:-1
so has part: feature:37161-37409:-1:exon

WP_198407704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37161-37409:-1:exon

H0I88_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00150
old locus tag: TGRD_RS00145
so part of: sequence
location: complement(37424..37888)
location: region:37424-37888:-1
so has part: feature:37424-37888:-1:exon
subclass of: SO_0000010

position:37424:-1
position: 37424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37888:-1
position: 37888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37424-37888:-1:exon

H0I88_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00150
old locus tag: TGRD_RS00145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINELKQAITNTIKSIEQNNEYVSKSNSLKSESRKKVIYLKGIYNRKDDGKDLSTGNLIRRVLEVFLSFKVPNKRSLYVKFQSIAGNDNKYPGLLNMANAFSHITEISSVTDANDFISYTAGRQEIRELFEFMKDNDEKHFNGLEIKLQDKAVN
SIO_010081: H0I88_RS00150
subclass of: SO_0000673
so part of: H0I88_RS00150
location: complement(37424..37888)
location: region:37424-37888:-1
so has part: feature:37424-37888:-1:exon

WP_095558634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37424-37888:-1:exon

H0I88_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00155
old locus tag: TGRD_RS00150
so part of: sequence
location: complement(38220..39068)
location: region:38220-39068:-1
so has part: feature:38220-39068:-1:exon
subclass of: SO_0000010

position:38220:-1
position: 38220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39068:-1
position: 39068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38220-39068:-1:exon

H0I88_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00155
old locus tag: TGRD_RS00150
inference: COORDINATES: protein motif:HMM:NF024565.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTNFINSVNKLKNFGSFRDFSKDISLPKFNQANLFYGCNASGKTTLTRVFSCLNNGRFVTPELEGCELEISVNDKAINIKNFSDSHIKNKIRVFNSDFIEDNLQLKEGQAKKLSAVIGKENIDIKNDITKLEEELKALKNDKDELNVSVELSQVKKQLDNHYTNIASEIKGTLNLKQNDYKKYKSSSPPPDKITDDEKRQAVSIFTTPQKSKIDQPYIEILKNIEEVVLSTNDFNNSIELLKNPIKRKTAELKEKVIKWIEEGSCIHQEDHSKCLFCGQKNI
SIO_010081: H0I88_RS00155
subclass of: SO_0000673
so part of: H0I88_RS00155
location: complement(38220..39068)
location: region:38220-39068:-1
so has part: feature:38220-39068:-1:exon

WP_095558635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38220-39068:-1:exon

H0I88_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00160
old locus tag: TGRD_RS00155
so part of: sequence
location: complement(39105..39491)
location: region:39105-39491:-1
so has part: feature:39105-39491:-1:exon
subclass of: SO_0000010

position:39105:-1
position: 39105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39491:-1
position: 39491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39105-39491:-1:exon

H0I88_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00160
old locus tag: TGRD_RS00155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKESSFKIWRSDMVSDEEELKAGIDLFENPLKDGAKEENVLLELLLKCGYDLNVKAEIIEADNSKIYAVNDNELIVCLEKVSDKIISKILELKPAKCLMLDSLFDGRDSFKTNTVLQLQDAEIDLVVI
SIO_010081: H0I88_RS00160
subclass of: SO_0000673
so part of: H0I88_RS00160
location: complement(39105..39491)
location: region:39105-39491:-1
so has part: feature:39105-39491:-1:exon

WP_095558636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39105-39491:-1:exon

H0I88_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00165
old locus tag: TGRD_pseudo_7
old locus tag: TGRD_RS00160
so part of: sequence
location: complement(39488..41005)
location: region:39488-41005:-1
so has part: feature:39488-41005:-1:exon
subclass of: SO_0000010

position:39488:-1
position: 39488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41005:-1
position: 41005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39488-41005:-1:exon

H0I88_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00165
old locus tag: TGRD_pseudo_7
old locus tag: TGRD_RS00160
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF013704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MQNFSKESINIAEEKLTKFKQLFPEVFSEGKVDFERLKLILGESASISNERYVLNWADKSKAFTAIQTPTTKTLYPAPEESVEFNSSGNVFIEGENLEVLKILQKPYFGKIKMIYIDPPYNTGNDNFIYPDKFSETKSEYLKKIKEKDEKGYLLKEGLFHKNSKENGQFHSNWLNMMYPRLFLAKNLLKDDGVIFISIDDNEVHNLRLLMNEIFGEENFIANLIWESKYTVSNDAKYISYQHENILFFCKNKEEFSIGKLDRTDEQNQSYKNRDNDIKGAWKATPLHAKSGTENSKYSIVFDNGIEWKCPSGRYPRYSKDTLINLYKNGELYFNSNGGVDKKTYLSKVESKGVVSGSILRYQAVGHTHHGNNEEIASLLGKGIFDNPKGVSLLLRLLKLGNASNQDIILDFFAGSGTTAQAVMELNKEDGGNRKFICVQLPEKTEEKSEAFKAGYKTIAEISKERIRRAAKKIEDEAKREYPILSSLSSERQGKECPDLGFKVYK
SIO_010081: H0I88_RS00165
subclass of: SO_0000673
so part of: H0I88_RS00165
location: complement(39488..41005)
location: region:39488-41005:-1
so has part: feature:39488-41005:-1:exon

WP_095558637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39488-41005:-1:exon

H0I88_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00170
old locus tag: TGRD_RS05800
so part of: sequence
location: complement(41618..41755)
location: region:41618-41755:-1
so has part: feature:41618-41755:-1:exon
subclass of: SO_0000010

position:41618:-1
position: 41618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41755:-1
position: 41755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41618-41755:-1:exon

H0I88_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00170
old locus tag: TGRD_RS05800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRFIMETAKESLMMLMLCSKSKSYRVAGGTNLDDCPVFEVKDKT
SIO_010081: H0I88_RS00170
subclass of: SO_0000673
so part of: H0I88_RS00170
location: complement(41618..41755)
location: region:41618-41755:-1
so has part: feature:41618-41755:-1:exon

WP_158302754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41618-41755:-1:exon

H0I88_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00180
old locus tag: TGRD_017
old locus tag: TGRD_RS00180
so part of: sequence
location: complement(42522..43154)
location: region:42522-43154:-1
so has part: feature:42522-43154:-1:exon
subclass of: SO_0000010

position:42522:-1
position: 42522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43154:-1
position: 43154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42522-43154:-1:exon

H0I88_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00180
old locus tag: TGRD_017
old locus tag: TGRD_RS00180
EC number: 3.1.26.4
inference: COORDINATES: protein motif:HMM:NF000594.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HII
translation: MFSNIFSFDRNFYNKGFYPVAGIDEAGRGPLAGPVVAAVVILPKDSAIPYLNDSKQLSEKKREILFEIIKETALDYAVELVNNEIIDEINILQATFLAMSRAVLKLKTQPDLYLIDGNRKVHGLSFNQETIVGGDAKSACIAAASILAKVSRDKMMLEYAKQYPVYEFEKHKGYGTKKHIEALKKHGICPIHRLTFSPVNDIISQTKLNI
SIO_010081: H0I88_RS00180
subclass of: SO_0000673
so part of: H0I88_RS00180
location: complement(42522..43154)
location: region:42522-43154:-1
so has part: feature:42522-43154:-1:exon

WP_015423029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42522-43154:-1:exon

H0I88_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplS
locus tag: H0I88_RS00185
old locus tag: TGRD_018
old locus tag: TGRD_RS00185
so part of: sequence
location: complement(43643..44041)
location: region:43643-44041:-1
so has part: feature:43643-44041:-1:exon
subclass of: SO_0000010

position:43643:-1
position: 43643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44041:-1
position: 44041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43643-44041:-1:exon

H0I88_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplS
locus tag: H0I88_RS00185
old locus tag: TGRD_018
old locus tag: TGRD_RS00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015478452.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MSLSLLAQVQIAQKRDLGVSFKSGDQIKVHFKIIEGGNERIQIFEGIVIRIKGSGLSKTFTVRKISFGIGVERIFPIHSPRIDKIEVVRRGKVRRAKLYYLRNLSGKAARISEYSSRRNLKKETVNQVPAAN
SIO_010081: H0I88_RS00185
subclass of: SO_0000673
so part of: H0I88_RS00185
location: complement(43643..44041)
location: region:43643-44041:-1
so has part: feature:43643-44041:-1:exon

WP_015423030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43643-44041:-1:exon

H0I88_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trmD
locus tag: H0I88_RS00190
old locus tag: TGRD_019
old locus tag: TGRD_RS00190
so part of: sequence
location: complement(44187..44888)
location: region:44187-44888:-1
so has part: feature:44187-44888:-1:exon
subclass of: SO_0000010

position:44187:-1
position: 44187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44888:-1
position: 44888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44187-44888:-1:exon

H0I88_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trmD
locus tag: H0I88_RS00190
old locus tag: TGRD_019
old locus tag: TGRD_RS00190
EC number: 2.1.1.228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010691543.1
GO function: GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
translation: MKIDVLTIFPGMFKGPLTESLIGKAIEKEILKINIIDIRSFSKDKHKKVDDKSFGGGCGMVMKLEPLYDAIKSTGVKKKNSTYKNPYTKPYVIYMSPQGRILSDSIVKNLAKFKQLVIICGHYEGVDERTMNYVDEEISIGDYILTGGEIPAMVLIDSTARMLTGVVKEKSSVKNDSFYNNLLDYPHYTRPAVFKGYKIPEVLLSGDHKKISEWRVQESYKRTKERRPDLLKK
SIO_010081: H0I88_RS00190
subclass of: SO_0000673
so part of: H0I88_RS00190
location: complement(44187..44888)
location: region:44187-44888:-1
so has part: feature:44187-44888:-1:exon

WP_015423031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44187-44888:-1:exon

H0I88_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00195
old locus tag: TGRD_020
old locus tag: TGRD_RS00195
so part of: sequence
location: complement(44878..45189)
location: region:44878-45189:-1
so has part: feature:44878-45189:-1:exon
subclass of: SO_0000010

position:44878:-1
position: 44878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45189:-1
position: 45189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44878-45189:-1:exon

H0I88_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00195
old locus tag: TGRD_020
old locus tag: TGRD_RS00195
inference: COORDINATES: protein motif:HMM:NF017088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRC-barrel domain-containing protein
translation: MDSKKRDLKWKVSDILGFEVFNQNGKRLGILSDIILTGSNDVWVVKYYNEEVLIPALKNIVKEVNVIRKKIFVILPKEYEYIYSQVKLADDVLEYNGYFVYED
SIO_010081: H0I88_RS00195
subclass of: SO_0000673
so part of: H0I88_RS00195
location: complement(44878..45189)
location: region:44878-45189:-1
so has part: feature:44878-45189:-1:exon

WP_015423032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44878-45189:-1:exon

H0I88_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00200
old locus tag: TGRD_021
old locus tag: TGRD_RS00200
so part of: sequence
location: complement(45194..45424)
location: region:45194-45424:-1
so has part: feature:45194-45424:-1:exon
subclass of: SO_0000010

position:45194:-1
position: 45194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45424:-1
position: 45424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45194-45424:-1:exon

H0I88_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00200
old locus tag: TGRD_021
old locus tag: TGRD_RS00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KH domain-containing protein
translation: MKDLVLFIAKALVDNPDQVEVREVTGEKATVLELKVAEGDRGKIIGKEGRIIKAIRVIINSASAKLDKRATVEVVE
SIO_010081: H0I88_RS00200
subclass of: SO_0000673
so part of: H0I88_RS00200
location: complement(45194..45424)
location: region:45194-45424:-1
so has part: feature:45194-45424:-1:exon

WP_015423033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45194-45424:-1:exon

H0I88_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsP
locus tag: H0I88_RS00205
old locus tag: TGRD_022
old locus tag: TGRD_RS00205
so part of: sequence
location: complement(45460..45714)
location: region:45460-45714:-1
so has part: feature:45460-45714:-1:exon
subclass of: SO_0000010

position:45460:-1
position: 45460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45714:-1
position: 45714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45460-45714:-1:exon

H0I88_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsP
locus tag: H0I88_RS00205
old locus tag: TGRD_022
old locus tag: TGRD_RS00205
inference: COORDINATES: protein motif:HMM:TIGR00002.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MAVRLRLQRRGKPKRPYYRVVAIDQRAKRDGEPIEILGQYDPIAEDNKFKVNIERINYWLGIGAKASETVAALIKKNQTVEIKQ
SIO_010081: H0I88_RS00205
subclass of: SO_0000673
so part of: H0I88_RS00205
location: complement(45460..45714)
location: region:45460-45714:-1
so has part: feature:45460-45714:-1:exon

WP_015423034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45460-45714:-1:exon

H0I88_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00210
old locus tag: TGRD_RS00210
old locus tag: TGRD_tRNA03
so part of: sequence
location: complement(45896..45987)
location: region:45896-45987:-1
so has part: feature:45896-45987:-1:exon
subclass of: SO_0000663

position:45896:-1
position: 45896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45987:-1
position: 45987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45896-45987:-1:exon

H0I88_RS00210
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00210
old locus tag: TGRD_RS00210
old locus tag: TGRD_tRNA03
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(45950..45952),aa:Ser,seq:gct)
SIO_010081: H0I88_RS00210
subclass of: SO_0000673
so part of: H0I88_RS00210
location: complement(45896..45987)
location: region:45896-45987:-1
so has part: feature:45896-45987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45896-45987:-1:exon

H0I88_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: folD
locus tag: H0I88_RS00215
old locus tag: TGRD_023
old locus tag: TGRD_RS00215
so part of: sequence
location: 46149..47039
location: region:46149-47039:1
so has part: feature:46149-47039:1:exon
subclass of: SO_0000010

position:46149:1
position: 46149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47039:1
position: 47039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46149-47039:1:exon

H0I88_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: folD
locus tag: H0I88_RS00215
old locus tag: TGRD_023
old locus tag: TGRD_RS00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016291047.1
GO function: GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
translation: MKLIDGKKISSDKRAEIKEEVAKIKQQTEKIPGLATVLVGGDPASRVYIKSKIKACEDAGIKSFHHNLDANSSKEEIIALIKKLNENSEIDGILLQLPLPQNKDAQECLNAVSPLKDVDGLHPFNAGLLNLSKSWNEIIEKNILVSCTPLGVVHILHKSGIIIEGKTAVVIGRSNLVGKPLSMLLLANNATVIMAHSKTRNLKEICKSADIVVAAVGKSKFVNKDFIKTGAVVIDVGINRTSEGLCGDVDFDAVKDMDIKITPVPGGVGPMTITMLLENTLKAFNNRKRYLSNRMP
SIO_010081: H0I88_RS00215
subclass of: SO_0000673
so part of: H0I88_RS00215
location: 46149..47039
location: region:46149-47039:1
so has part: feature:46149-47039:1:exon

WP_015423035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46149-47039:1:exon

H0I88_RS06345
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06345
so part of: sequence
location: complement(47365..47493)
location: region:47365-47493:-1
so has part: feature:47365-47493:-1:exon
subclass of: SO_0000010

position:47365:-1
position: 47365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47493:-1
position: 47493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47365-47493:-1:exon

H0I88_RS06345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIQWKIAMRIDGAIIAIKKTVLYNLLLTAADAVLKCSEAGA
SIO_010081: H0I88_RS06345
subclass of: SO_0000673
so part of: H0I88_RS06345
location: complement(47365..47493)
location: region:47365-47493:-1
so has part: feature:47365-47493:-1:exon

WP_269763541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47365-47493:-1:exon

H0I88_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: serS
locus tag: H0I88_RS00220
old locus tag: TGRD_024
old locus tag: TGRD_RS00220
so part of: sequence
location: complement(47904..49175)
location: region:47904-49175:-1
so has part: feature:47904-49175:-1:exon
subclass of: SO_0000010

position:47904:-1
position: 47904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49175:-1
position: 49175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47904-49175:-1:exon

H0I88_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: serS
locus tag: H0I88_RS00220
old locus tag: TGRD_024
old locus tag: TGRD_RS00220
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003218092.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MLDIKVIRENVKEVKQAMLNRNLDISFDQLLNWDSERKTIIGKIEQLRLKRNKESEEIGRLKKESKEPPAELLAEINKVRDIIQEQEKQLLTIEKHIEDFLLRIPNIPDKSVPVGKDEKDNKIIRFVGKPEKFSFKPKYHWEIGEKLGIIDFAAASKISGPHFAVLKNEGSALERAIISFFLDKHKEKGYKEITTPYLVNRASMTGTGQLPNLEEDSFKCAIDDLYLIPTAEVPVTNIYRDDVLEESALPQKYVSYSACFRRESGSYGKDTKGLIRNHQFDKVELVKFAKPETSSEELESLVLDAGNVLELLGLPYRVVLLSTGDIGFSSSKTYDLEVWFAGYGIYREISSCSNLKDFQARRMNIKVKYSQNKKRELLHTLNGSGVAVGRTFAAILENYQQEDGSVVIPNSLREYTGFDIIKP
SIO_010081: H0I88_RS00220
subclass of: SO_0000673
so part of: H0I88_RS00220
location: complement(47904..49175)
location: region:47904-49175:-1
so has part: feature:47904-49175:-1:exon

WP_015423036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47904-49175:-1:exon

H0I88_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00225
old locus tag: TGRD_025
old locus tag: TGRD_RS00225
so part of: sequence
location: complement(49565..53089)
location: region:49565-53089:-1
so has part: feature:49565-53089:-1:exon
subclass of: SO_0000010

position:49565:-1
position: 49565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53089:-1
position: 53089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49565-53089:-1:exon

H0I88_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00225
old locus tag: TGRD_025
old locus tag: TGRD_RS00225
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004226.0
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MAAEFVHLHNHTEYSLLDGACRLIDDKGKPGELFNLIAKEYKMPALAITDHGNMYGAMEFYLAAKQSGIKPIIGCEIYVAPKSRFDKKNINRITEDNVNYHHLTLLAKDFEGYQNLMRIVSAGFTEGFYYKPRVDKEVLKKYRCGLIALSGCLAGEVASALVKGNKKKAQNAAIEYRDIFDKDNFYIEIMDNGLETQKKIIPSLIELSKSAAIPLVATNDCHFLKKEDAEVHDILLCIGTGKMLNETKRLHFDSDLFYYRSAEDMIKTFSSVPEAIKNTLEIAEKTNLEINTDKLLLPQFPIPKEYKSDSEYLETLCRRGLAARYDTIKPEHEERLKHELSVINKMGFASYFLIVSDFIKYAKDHRIPVGPGRGSGSGAMVAYTLGITDICPLKYGLLFERFLNPDRRSMPDLDIDFADYGRDEVIQYVRRKYGEEKCAQIITFGSMQSRLVIKDVARVMGFTPAESNNIAKLIPQNASIAEALQASTDLSKLVKADEKIAKLIAASQKLEGLKRHTGVHAAGMVIANKEITSYSPLAKGSKDIVTTQYDGGVLPQLGLLKIDFLGLKTLTIIDDCVKFIREKNPSFNLDNIPLDDKKTYELLGEAKTMGIFQLESIGMRDLIKKLKPSNIDDIIALIALYRPGPMGSGMLDNFVNRKHGRTKIVYDHPLQESILKDTYGVILYQEQVMKMSVALAGFTPGEADSLRKAMSKKIPEVIEKQREKFVRGTKEKGVNKKISEKIFNNIVAFGGYGFNKSHSAAYGIISYKTAYLKANYPLEYITALCNNEIGRPATKNNEESKLVAYLGDALAFDIKVLPPDVQYSDGKFKTEDKNIRFGMLAVKNVGKGVTDSIEQSRIENGQLKSFKDWVDFLQRIDLKSINKKALESLIKAGVFDSFGKDKFTIRGRLIQNIDSYADKAAKVKQYRESLQGFLFDNVKTITDDILSLQEVKPLEPLEALNFEKEVLGFYISGHPLTHRKKDIIAYSNYRLDKLPQLKENADRKTVRIAGMIVSVKKLTSTTRKEPYARFKIEDLHGNVNALLFPKNFEKFGGYLTLNNIVVIKGWLTNMQGQLEMITEDIMTIDEAKKKSPSKCDEIRIKFSAASFNVALEEELKKIFKIHTGKTKVYLILEDSLHGNFSIETEYLSDCSDNFINDVETIIGVKDSVELHYTN
SIO_010081: H0I88_RS00225
subclass of: SO_0000673
so part of: H0I88_RS00225
location: complement(49565..53089)
location: region:49565-53089:-1
so has part: feature:49565-53089:-1:exon

WP_015423037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49565-53089:-1:exon

H0I88_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00230
old locus tag: TGRD_026
old locus tag: TGRD_RS00230
so part of: sequence
location: 53699..54268
location: region:53699-54268:1
so has part: feature:53699-54268:1:exon
subclass of: SO_0000010

position:53699:1
position: 53699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54268:1
position: 54268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53699-54268:1:exon

H0I88_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00230
old locus tag: TGRD_026
old locus tag: TGRD_RS00230
inference: COORDINATES: protein motif:HMM:NF015944.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LemA family protein
translation: MLTTAMTTFIVLIVLAGLYILLTYNRFVMLKNRVKEAWSDIEVQMKRRYDLIPNLVETVKGYASHEKNTLDAVIKARNAAMQSTGNIADKAQSENALSGTLKSLFALSESYPKLKANENFLELQRELTDTENKIQSSRRFYNSNVLAVNTKLELFPSNIIGGAFGFTKQDFFKLDDTEQDAKKNVKVSF
SIO_010081: H0I88_RS00230
subclass of: SO_0000673
so part of: H0I88_RS00230
location: 53699..54268
location: region:53699-54268:1
so has part: feature:53699-54268:1:exon

WP_015423038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53699-54268:1:exon

H0I88_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00235
old locus tag: TGRD_027
old locus tag: TGRD_RS00235
so part of: sequence
location: 54382..55386
location: region:54382-55386:1
so has part: feature:54382-55386:1:exon
subclass of: SO_0000010

position:54382:1
position: 54382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55386:1
position: 55386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54382-55386:1:exon

H0I88_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00235
old locus tag: TGRD_027
old locus tag: TGRD_RS00235
inference: COORDINATES: protein motif:HMM:NF013594.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metallopeptidase
translation: MTNITTYDFISSNSRKTVWLMILFPISLAVIVYLIILLASAVVAVDNSQIYNRVSVLAVANQTAAHVLPVVSVIAILWVLISYYAGQNFVLSVVGAVELTKKNAPEVIRTVENVAVAAGLPVPKIYAINDEALNAFATGRDPTHSYIVLTKGIINKLEKPELEGVIAHEMSHIGNRDIRLMLIMIVCISFATVVAELLLRFVLTAKINKSKNNNSSAAVQIFLFALATAFYMYGYLIAPLIKFAVSRTREFQADATAALITRNPQGLIDALKKISGNSRVEKLSDKQTISSVCIANPLTKDKQNSFFSKISGLFATHPPIEDRIKVLQAMDGYR
SIO_010081: H0I88_RS00235
subclass of: SO_0000673
so part of: H0I88_RS00235
location: 54382..55386
location: region:54382-55386:1
so has part: feature:54382-55386:1:exon

WP_015423039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54382-55386:1:exon

H0I88_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00245
old locus tag: TGRD_028
old locus tag: TGRD_RS00240
so part of: sequence
location: complement(56673..57428)
location: region:56673-57428:-1
so has part: feature:56673-57428:-1:exon
subclass of: SO_0000010

position:56673:-1
position: 56673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57428:-1
position: 57428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56673-57428:-1:exon

H0I88_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00245
old locus tag: TGRD_028
old locus tag: TGRD_RS00240
inference: COORDINATES: protein motif:HMM:TIGR00195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MKIVSWNVNGIRAIYKKDFTAWFKDENADIVCVQETKAGETQFPKDIKEINGYNFYCSSAEKKGYSGVAVWSKIKPDFVIASIENKVFDNEGRIIRLDFKDFIIFNVYFPNGGASQERLKYKMEFYDYLIKYLKQFKDKTVIICGDYNTAHFSIDLARPKENEKVSGFMPEEREKLDNLVSSGFIDTFRYFNKEPGNYTWWDYKTAARSRNIGWRIDHFFMSQHSVKRLKSADIKKSVSGSDHCPVSITVF
SIO_010081: H0I88_RS00245
subclass of: SO_0000673
so part of: H0I88_RS00245
location: complement(56673..57428)
location: region:56673-57428:-1
so has part: feature:56673-57428:-1:exon

WP_015423040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56673-57428:-1:exon

H0I88_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00250
old locus tag: TGRD_029
old locus tag: TGRD_RS00245
so part of: sequence
location: complement(57519..57980)
location: region:57519-57980:-1
so has part: feature:57519-57980:-1:exon
subclass of: SO_0000010

position:57519:-1
position: 57519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57980:-1
position: 57980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57519-57980:-1:exon

H0I88_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00250
old locus tag: TGRD_029
old locus tag: TGRD_RS00245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRLLSALCAIAVFTNISFATTPLKLSIWEKTAIPQDDSVNGLEIGIGTYTPEVKGILCNLIYAKTDDCSGWQHACLITFTELFKGLQTGIINLNSGEISGIQKGFFNKAVSVKGIQVGFINVAENMEGIQLGFINFIKKGPIPIMIIANARF
SIO_010081: H0I88_RS00250
subclass of: SO_0000673
so part of: H0I88_RS00250
location: complement(57519..57980)
location: region:57519-57980:-1
so has part: feature:57519-57980:-1:exon

WP_015423041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57519-57980:-1:exon

H0I88_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: yihA
locus tag: H0I88_RS00255
old locus tag: TGRD_030
old locus tag: TGRD_RS00250
so part of: sequence
location: complement(58069..58650)
location: region:58069-58650:-1
so has part: feature:58069-58650:-1:exon
subclass of: SO_0000010

position:58069:-1
position: 58069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58650:-1
position: 58650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58069-58650:-1:exon

H0I88_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: yihA
locus tag: H0I88_RS00255
old locus tag: TGRD_030
old locus tag: TGRD_RS00250
inference: COORDINATES: protein motif:HMM:TIGR03598.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MLEKTVFFRATAEADSLPKSVAEIIFSGRSNVGKSSVINALCSQKNLARISKTPGRTRSINVYSVSLRKWIVDLPGYGFARVSLQEKKLWNKMMEECIIKRNSNKTVYIVIDAFVGPTELDFDMTKWLKEYNISFKIIANKCDKVPQTISEDEIQSKAAECFGTDKPNVFTVSAKKRNGFNKLKTDILKFFNS
SIO_010081: H0I88_RS00255
subclass of: SO_0000673
so part of: H0I88_RS00255
location: complement(58069..58650)
location: region:58069-58650:-1
so has part: feature:58069-58650:-1:exon

WP_015423042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58069-58650:-1:exon

H0I88_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00260
old locus tag: TGRD_031
old locus tag: TGRD_RS00255
so part of: sequence
location: complement(58881..59597)
location: region:58881-59597:-1
so has part: feature:58881-59597:-1:exon
subclass of: SO_0000010

position:58881:-1
position: 58881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59597:-1
position: 59597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58881-59597:-1:exon

H0I88_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00260
old locus tag: TGRD_031
old locus tag: TGRD_RS00255
inference: COORDINATES: protein motif:HMM:NF024221.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MSNPLLKDSVFQSTESYSEVMTMSGTINKSIILWILLVGSAFYSWTHPGVIAPLLFPISIGAFVLAFVSIFKKTATPFLSPLYAMCEGFVLGTVSLYFEKSYPGIVVNAILSTICVLFCMLASYKAGILKATPRFQKTVIFSTLAIAFVYIADLLLNSFGAGKLPYIHDSSTFGVIISIVIVAVASFNLIIDFDLIEKGAYNRAPKYMEWYSALSLMITLVWLYLEMLKLLSKLNRKD
SIO_010081: H0I88_RS00260
subclass of: SO_0000673
so part of: H0I88_RS00260
location: complement(58881..59597)
location: region:58881-59597:-1
so has part: feature:58881-59597:-1:exon

WP_015423043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58881-59597:-1:exon

H0I88_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00265
old locus tag: TGRD_032
old locus tag: TGRD_RS00260
so part of: sequence
location: complement(59572..60039)
location: region:59572-60039:-1
so has part: feature:59572-60039:-1:exon
subclass of: SO_0000010

position:59572:-1
position: 59572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60039:-1
position: 60039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59572-60039:-1:exon

H0I88_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00265
old locus tag: TGRD_032
old locus tag: TGRD_RS00260
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MLKEFSCGAVLYKMKNDNPLFLLVNSKRSRIWGFPKGHIENCESEIETARREIFEETGIKNISFIKNFRQEDVYIIDDTASRTDERQVEKHSIYFLASALEDASDFDKNEILELKWANINQARDMLSFANQKKIVNLAAYNLIIGGQHEQSAFKR
SIO_010081: H0I88_RS00265
subclass of: SO_0000673
so part of: H0I88_RS00265
location: complement(59572..60039)
location: region:59572-60039:-1
so has part: feature:59572-60039:-1:exon

WP_015423044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59572-60039:-1:exon

H0I88_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00270
old locus tag: TGRD_033
old locus tag: TGRD_RS00265
so part of: sequence
location: complement(60335..61621)
location: region:60335-61621:-1
so has part: feature:60335-61621:-1:exon
subclass of: SO_0000010

position:60335:-1
position: 60335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61621:-1
position: 61621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60335-61621:-1:exon

H0I88_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00270
old locus tag: TGRD_033
old locus tag: TGRD_RS00265
inference: COORDINATES: protein motif:HMM:NF001813.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: competence/damage-inducible protein A
translation: MKIELICTGSELLTGKVNTNAAYIGSRLSAIGFEISLVTDVGDKKQDLLREFKRAFKRSNIVITTGGLGPTFDDITVETAAECLNLKIYPDEKVLNSIKEYFLKRSVAASIPKINEKQANIIRGAKVLENRVGTAPGQMLHFKFKDSEKKYRKTLFLLPGPPEEMKPIFEENVEPFLKSYSVGIKKNGVLHVFGIAESAVEEMIKPVMEEAVSGDSKFVEFGILASKSVIDIKFSVSGTDELFVDETISKLKLGFGNVLKDNIFGFDNDTLASVAGRLLLENKKTVSFAESCTGGNIAAAITDIPGSSLYFKSSVVTYSNESKMKLLGVKEETLTNFGAVSKETVKEMAEGVLKLSDSDYAFSVTGIAGPIGGTKKKPVGLVYIGSADKKKTESFKFNFSGTRKDIRKRTVNTALDLLRRKLIAKHSY
SIO_010081: H0I88_RS00270
subclass of: SO_0000673
so part of: H0I88_RS00270
location: complement(60335..61621)
location: region:60335-61621:-1
so has part: feature:60335-61621:-1:exon

WP_015423045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60335-61621:-1:exon

H0I88_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: thrC
locus tag: H0I88_RS00275
old locus tag: TGRD_034
old locus tag: TGRD_RS00270
so part of: sequence
location: complement(61800..62864)
location: region:61800-62864:-1
so has part: feature:61800-62864:-1:exon
subclass of: SO_0000010

position:61800:-1
position: 61800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62864:-1
position: 62864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61800-62864:-1:exon

H0I88_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: thrC
locus tag: H0I88_RS00275
old locus tag: TGRD_034
old locus tag: TGRD_RS00270
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013085328.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MGYRGLIEKYRKNLPVSDKTPVISLHEGNTPLLPARNLPDKLGFNGKIYLKFEGMNPTGSFKDRGMTMAVSKAVEDGSKIVICASTGNTSASAAAYAARAGIKCVVLIPEGKIALGKLSQAVMHGAEVLEIDGNFDEALNLVKELSSKYPLTLVNSINPFRIEGQKTAAYEICESLEQSPDYQFMPVGNAGNITAYWKGYKEYNKAAPEKYTLPKMMGFQAAGSAPIVEGHPITNPETIATAIRIGNPASWKTAEEARDESGGVIDKVTDEEILEAYRIVAVTEGVFCEPASASSIAGLIKYIKQGYFKSADPAKIVCILTGHGLKDPDTAVTNAVKPQKVKADIKDIINTIGF
SIO_010081: H0I88_RS00275
subclass of: SO_0000673
so part of: H0I88_RS00275
location: complement(61800..62864)
location: region:61800-62864:-1
so has part: feature:61800-62864:-1:exon

WP_015423046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61800-62864:-1:exon

H0I88_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00280
old locus tag: TGRD_035
old locus tag: TGRD_RS00275
so part of: sequence
location: complement(63069..63851)
location: region:63069-63851:-1
so has part: feature:63069-63851:-1:exon
subclass of: SO_0000010

position:63069:-1
position: 63069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63851:-1
position: 63851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63069-63851:-1:exon

H0I88_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00280
old locus tag: TGRD_035
old locus tag: TGRD_RS00275
inference: COORDINATES: protein motif:HMM:NF025388.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4238 domain-containing protein
translation: MPKTKNNHYIPQFYSSKWKFNDTQVYCLQKENSNIFKPNPRNIFADRIWDNEVENMFAQIENNVWFPTINKILKDKTMDKLSETEFGNFYSFIVALKVRKKHIVAEAYETAESDLAKFDDELIRHGKATKEEIEELQKYNKPLSNYSFLSVFNPGGAIFGQFKRFTFGNKIIEEKDMQYGQFLTSNHPLLMLGEKGKVDLIMIALTPKLLIFGTRGPEIFKTVHNKPINIIIKEFNKEIYNDTESEYIISNKRFLLKQFL
SIO_010081: H0I88_RS00280
subclass of: SO_0000673
so part of: H0I88_RS00280
location: complement(63069..63851)
location: region:63069-63851:-1
so has part: feature:63069-63851:-1:exon

WP_015423047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63069-63851:-1:exon

H0I88_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00285
old locus tag: TGRD_RS00280
so part of: sequence
location: 64675..65010
location: region:64675-65010:1
so has part: feature:64675-65010:1:exon
subclass of: SO_0000010

position:64675:1
position: 64675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65010:1
position: 65010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64675-65010:1:exon

H0I88_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00285
old locus tag: TGRD_RS00280
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-loop NTPase fold protein
translation: MTDNQTVDEKIQIKQDDCKKEIFNADKDKKDDILGRIRFAENMSLRLLNYKADESVIIGLNGEWGSGKSSVINLIKQCINNNNDNAGKPAIINFNPWMFSKREDITRYFFR
SIO_010081: H0I88_RS00285
subclass of: SO_0000673
so part of: H0I88_RS00285
location: 64675..65010
location: region:64675-65010:1
so has part: feature:64675-65010:1:exon

WP_158302756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64675-65010:1:exon

H0I88_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00290
old locus tag: TGRD_pseudo_13
old locus tag: TGRD_RS00285
so part of: sequence
location: 65090..66889
location: region:65090-66889:1
so has part: feature:65090-66889:1:exon
subclass of: SO_0000010

position:65090:1
position: 65090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66889:1
position: 66889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65090-66889:1:exon

H0I88_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00290
old locus tag: TGRD_pseudo_13
old locus tag: TGRD_RS00285
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-loop NTPase fold protein
translation: MLGALEYVPNSSVFLFSKFLKNIFKRCEKYCRKSENVSIMGIKNELNDRLIKNKRNTIVFIDDIDRLTNKEIREIFRLVRVNADFWGMIYVIAFDRHIVEKSFEEQGKEYLENIIQVNVNVPFPSKEGLSQFLCRELDRVIKTLPASAQEYLNKDENENNWDSVYRSGFRDFFKNIRDIKRFISGLEFNISRMCKNNVIEINPIDFIVVEAIRMFAYDFYLFMAENSVLFTAKHKLEFERLGLSEEKIKEEIENALTNCITEDNKCRQTVKGLVKELFPWLKDIEEGISREYNDVIWSKQLRVCSERLYNSYFNFIPGGDEGEMSRYEITKILKEMDSLETFERTLRQYIETKGIVKILARIQDFTGDENYISRENAKNVIGALFNIYEDLPGILYPISESINKMLDSYPKDSAQFIMNQLLNRETDKEKNFNLLKELIPQTKGLSMQFDKTRTQTPNSFQIPPDKIIFLQKICVEKINNVDKKYLINHKDLRFLLYKWKEWGGSKQLTEFINQVLESNKNTIVLVSRFISVSEEIEPRNGEIERIKKLQYLYKELSDFVNLEDIKTKLDEIKKFYPKLYEEHRNTIDLFLKGYEKSFV
SIO_010081: H0I88_RS00290
subclass of: SO_0000673
so part of: H0I88_RS00290
location: 65090..66889
location: region:65090-66889:1
so has part: feature:65090-66889:1:exon

WP_158302757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65090-66889:1:exon

H0I88_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00295
old locus tag: TGRD_036
old locus tag: TGRD_RS00290
so part of: sequence
location: 67198..71394
location: region:67198-71394:1
so has part: feature:67198-71394:1:exon
subclass of: SO_0000010

position:67198:1
position: 67198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71394:1
position: 71394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67198-71394:1:exon

H0I88_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00295
old locus tag: TGRD_036
old locus tag: TGRD_RS00290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNENSSQDYIELDRKYVKFQDSLSFLKPVNIEIVLKENDAVVILGDKGSGKTIEVKQFQSKHRDNSKYFELKDIYSGLQDVKSKIEVLIKSLDLKNDDSYLYLLFDAIDECRLQGIRKQDAFEITLRKIRNDLENLPIHIISKLKFIFTSREADWKKDADNNLIQKYLSIDTLKQNSGTANSDSVILKDPTNCTTDTGKHDIKISIYTLEELNNEQKRLIAKYLKENEDFFEKDIIAQGYSNTPLDCLEFLKFKTRRRNTAYKMEDFLRYKLQRRYRELNESRNDGQFPMIKIERLSKRLAAATLFCKTVSIQKRESYSDFSTSPRSNDVSLTELFPNEDSSCLNAFTNSALFSANGENSVKFWDELSRDNVAHFWLKDRIEKGKYNEIKNLIFQKCDSIISPKKSFIISAVFLANTEPEFRKYLIEFHPEFLVIYSYCCESLTEFDKKEILSKLLNKYSYRIQNIISVFSNNKKAFSFFVKDFDVEYIVAEFKRMKHNNFLAKIFLMQLLYYSDVKNLDRKLKGKVNSLLFSKKDMTIGINFYTSAVEILLRQEHPKINQKLKAFLLSNISKLSDVTIGTLLEDYLCPEYISFKEVTVLLKKYINEGCDNGGMAYLKIVYPKLIQKLSDASEIKSILDGISFDFSNENEVFIYVSLLIRFIDCGVKSDEISNHLLKLHKYNYDKFYPNSKNEEELEHLKEKITPEINLAFVKKLLEEYKAFKESNHDWFPYDKLYKINDDIMKIFLKETNNKSLSQNSIFYLFNFCLRNLKKTYSDSGTMMQIIKPYLNTKQKRQSWKEFLNPPNIAVKNKISEYKVQKEKNQQFLNEHIEDIRRAAKEYQHIIVGLSLKNKADISSIENEWGVDIAGAYKEGIKKYWQICELDFNQYVNEIVGTKNESLKQTVAGLSGLHLFFQDSPDCLNKLNEEQAKRAIYWGVQKLNLLPDWISKCIKIYPKIAKEIILPIIDKTIELKADNYLLFNLSQIDSDALSVFYEDLWGRIQNQPDSKSICDVVKIITNMNLIDDKKRSDLVVYIMGKISDIENKNTIIWLRLLYNTDKKKFAETIQNLEKKYSNESEKMQRFFISLFNELYLCQFCEVKNKTADNSGLIDLLPLLFKYIDPNNDVQRKNGAVFWTGARDNAESFRDQIFNFISSVNNFRKDDRSRLLDLAKKINHKKYKEYSERIQCVADELLLIDEENLAEDDVIKIEESDYLAPKSADDLFRIVCDKLDEIKTDIETSDYSLKELYQDNIKKEKYFQKYILMGLRKLSRNLYSSVREPEVAANNKPDLQIWDGNWCVNIECKVADNWSGNDMCDTIDSQLIEKYLKYKKYRHGILLLSRIKKDSWEIKKQSVYFSELIKMLQEHADEARKKYIHIKDIRVIGIDYSIQSKNCKK
SIO_010081: H0I88_RS00295
subclass of: SO_0000673
so part of: H0I88_RS00295
location: 67198..71394
location: region:67198-71394:1
so has part: feature:67198-71394:1:exon

WP_015423048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67198-71394:1:exon

H0I88_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00300
old locus tag: TGRD_RS00300
so part of: sequence
location: complement(71882..72112)
location: region:71882-72112:-1
so has part: feature:71882-72112:-1:exon
subclass of: SO_0000010

position:71882:-1
position: 71882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72112:-1
position: 72112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71882-72112:-1:exon

H0I88_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00300
old locus tag: TGRD_RS00300
inference: COORDINATES: protein motif:HMM:NF014691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MKTKYCACVPILVAVTHYKFVTTHPYYNGSGRTARILTTLVLHKYGYELKGIYNLEEYYAKDLQRYYKAVDNRMLS
SIO_010081: H0I88_RS00300
subclass of: SO_0000673
so part of: H0I88_RS00300
location: complement(71882..72112)
location: region:71882-72112:-1
so has part: feature:71882-72112:-1:exon

WP_095558645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71882-72112:-1:exon

H0I88_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00305
old locus tag: TGRD_RS00305
so part of: sequence
location: complement(72117..72317)
location: region:72117-72317:-1
so has part: feature:72117-72317:-1:exon
subclass of: SO_0000010

position:72117:-1
position: 72117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72317:-1
position: 72317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72117-72317:-1:exon

H0I88_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00305
old locus tag: TGRD_RS00305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYSKTLEIKEKDIKILHGYITGNGKPKPTNYRTEQNVIKNFGSGKIVYLFSEAKDVPKLMSAFFA
SIO_010081: H0I88_RS00305
subclass of: SO_0000673
so part of: H0I88_RS00305
location: complement(72117..72317)
location: region:72117-72317:-1
so has part: feature:72117-72317:-1:exon

WP_095558646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72117-72317:-1:exon

H0I88_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00310
old locus tag: TGRD_037
old locus tag: TGRD_RS00310
so part of: sequence
location: 72603..74315
location: region:72603-74315:1
so has part: feature:72603-74315:1:exon
subclass of: SO_0000010

position:72603:1
position: 72603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74315:1
position: 74315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72603-74315:1:exon

H0I88_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00310
old locus tag: TGRD_037
old locus tag: TGRD_RS00310
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF014442.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MSSFSDKANFIWSVADLLRGDFKQSEYGRVILPFTVLRRFDCVLAPHKDRILEINKTLTVTNKAPVFKRCTGYDYYNISKFSFEKLRDDSNAVETNLRDYISGFSDDIRAILDNFEIGITIKRLKKANLLYLIVQKFAELDLDEKSIDNLTMGYMFEDLIRKFSEKSNETAGEHFTPREVIELMVDLLLEEDGDILNTEGKVIKVYDPACGTGGMLTAAQKKLQEYNGKIKVIPFGQELNPETYAICKSDMSIKGNSQAGIVLGNSFSEDGFKDEKFDYMLSNPPFGVEWKKVQSFILDEAEKQGFNGRFGAGTPRISDGSLLFLQNMISKMIPQKDGGSRIAIVFNGSPLFTGDAGSGESEIRKWIIENDFLEAVIGLPDQLFYNTGIATYIWILSNRKSDRRKGKIRLVNGVSFFEKMRKSLGNKRNEISDKSRNALVNLYSMHEPDENYIDFDNSDFGYKKITIDRPLYDKDGKPELDKKGNKKPNAELRDIETVPLKEDVNEYFKREVLPYVPGAWIDESKTKTGYEIPFTRHFYKFVPLRSSQEIMKEIECLKKDIDEAFQELIK
SIO_010081: H0I88_RS00310
subclass of: SO_0000673
so part of: H0I88_RS00310
location: 72603..74315
location: region:72603-74315:1
so has part: feature:72603-74315:1:exon

WP_015423049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72603-74315:1:exon

H0I88_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00315
old locus tag: TGRD_038
old locus tag: TGRD_RS00315
so part of: sequence
location: 74315..75619
location: region:74315-75619:1
so has part: feature:74315-75619:1:exon
subclass of: SO_0000010

position:75619:1
position: 75619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74315-75619:1:exon

H0I88_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00315
old locus tag: TGRD_038
old locus tag: TGRD_RS00315
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MEEYSKYKPSGIEWIGDIPKNWNFVSCRLIVSERNERNKGMKNNNYLSLMANIGVIPYEEKGDIGNKKPENLEKCKIVYEGDLIINSMNYFIGSYGISKYDGICSPVYIVLYANTKVIEPRFAFRVFENPKFQGVAQSFGNGILEHRRAINWDILKNIKIPVPLLEEQRNILSFLDKKTEKIDALISDKEKLIKLLREYRQSIISETVTKGLDKKVQMKHSGIEWIGDIPYDWKVNKFNRIIIRVSTGLNPRNNFKLGDGDCYYVTIKNFKKGKLFLDEKCDRMTKEALNIINERSDLKIDDILFSSIGEEAEAYLISEHPTNWNINESVFTIRVNKDLVLPNFFYYLIANKSFFNDLLKDATGSTFKSIKINSLIEKKVPVPSLKTQKEIANLLDDKTEKIDNLIENITKQIKKLQEYRKSIIGEAVTGKAAI
SIO_010081: H0I88_RS00315
subclass of: SO_0000673
so part of: H0I88_RS00315
location: 74315..75619
location: region:74315-75619:1
so has part: feature:74315-75619:1:exon

WP_015423050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74315-75619:1:exon

H0I88_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00320
old locus tag: TGRD_039
old locus tag: TGRD_RS00320
so part of: sequence
location: 75619..78621
location: region:75619-78621:1
so has part: feature:75619-78621:1:exon
subclass of: SO_0000010

position:78621:1
position: 78621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75619-78621:1:exon

H0I88_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00320
old locus tag: TGRD_039
old locus tag: TGRD_RS00320
inference: COORDINATES: protein motif:HMM:NF037510.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease
translation: MPIKTKEETFENEIENILLKNGYIKGNPADYDKKYALDTALLFKFLQNSQSKEWGKLVNKYGDGAEKSFLRRLGRELESKGMLYLLRNGIIDTPAKFELCFFEPASNMNETDIENYKKNILSITRQVHYSLKNENSIDMVIFINGLPVSTIELKNPVAGQTVENAKRQYKYDRDPSDLLLSFKIRCLVHFAADTDEIYMTTKLCGADTYFLPFNKGSGHGKGNPLNSRGYRTSYLWEDVLQKDSLLDIIRRFIHLEVKDKKENIIFPRYHQLDTVRKLIADVKANGLGKNYLIQHSAGSGKSNSIAWLAHHLQNLHNADDKIIFNSIVVVTDRKVLDRQLQDTIYQFEHIDGVVAKIDVNSKQLAEALSAGRKIIITTLQKFPFVLEEVENLRELKGKRFAVIIDEAHSSQTGEASSKLKAVLGDDTAGLSECEKLQKTADEEAKEEKNIPDSEDIIIKEMKTHGRLKNLSFFAFTATPKPATIEMFGNKGDDGKPKAFHLYSMRQAVEEGFILDVLKNYMTYTTYFRLGKAIANDPRYDKSRANKALGKFLSLHPHNLAQKTQIIVEHFRSVTKNKICGKAKAMVVTSSRLHAVRYYFEFKKYIKKMGYQKELRVLVAFSGTVSDEGKECTEQKLNNIKETELKEKFKGTDYQILLVAEKYQTGYDEPLLHTMFIDKKLGGVKAVQTLSRLNRICPGKEDTFILDFVNSEEDIKKSFEPYYKAADIEETTDANIVYDIKSKLDEFRIYWDTEIENFANVFFKPSKKQENLDFSILNSYIDPAVERYKGKNEEEQEEFKSNLTKFVRAYSFISNIIKLDDVKMHKFFAYSKYLLRKLPKDKRDEVNLNDEITLQYYRVQKIFEGSIILEEENNPLKNYKYVSKVDTKYETASLSELIEKLNERFGTDFTGMDKMLQQFIADMGKDENLHKQAMNNSKEHFKFPFNDAFMTIVVDRMVQNKEFCERILDDEKFGKTVKELLSGYMYDRLRKTDSVKIELDK
SIO_010081: H0I88_RS00320
subclass of: SO_0000673
so part of: H0I88_RS00320
location: 75619..78621
location: region:75619-78621:1
so has part: feature:75619-78621:1:exon

WP_015423051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75619-78621:1:exon

H0I88_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00325
old locus tag: TGRD_040
old locus tag: TGRD_RS00325
so part of: sequence
location: complement(79077..80129)
location: region:79077-80129:-1
so has part: feature:79077-80129:-1:exon
subclass of: SO_0000010

position:79077:-1
position: 79077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80129:-1
position: 80129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79077-80129:-1:exon

H0I88_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00325
old locus tag: TGRD_040
old locus tag: TGRD_RS00325
inference: COORDINATES: protein motif:HMM:NF024685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MSNPDSTKKVFFLGAGFSKAINHKYPLLSELNEEIKPNIIKGELFKCYRNICSKIGENIEELLAYLSLDLPWKTEYTKTLDKALYIDITKNISATINSLNTMPDKYDYDQEQEQVRLLADFIKENLSLCLTLNYDTLLEKIIFSKKDENYQRSNGYEGFYKVPIQSVADRWKISTSAKWGFGSEDPKGKKLPTILKLHGSINWMWAGISPSDPIYCSDKNDSIQEINNSVLELQPFIVPPALDKNSFYNNNILKSIWSLAYKGLMKSKEIYIIGFSLPDSDISIKYFFKEVMSKNKDRNTSSTIYVINTDESDELKKRYKNVFPEESLNFDYCCQYAFDRFVKEKLSANL
SIO_010081: H0I88_RS00325
subclass of: SO_0000673
so part of: H0I88_RS00325
location: complement(79077..80129)
location: region:79077-80129:-1
so has part: feature:79077-80129:-1:exon

WP_015423052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79077-80129:-1:exon

H0I88_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00330
old locus tag: TGRD_pseudo_15
old locus tag: TGRD_RS00330
pseudo: true
so part of: sequence
location: complement(80317..81086)
location: region:80317-81086:-1
so has part: feature:80317-81086:-1:exon
subclass of: SO_0000010

position:80317:-1
position: 80317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81086:-1
position: 81086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80317-81086:-1:exon

H0I88_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00330
old locus tag: TGRD_pseudo_15
old locus tag: TGRD_RS00330
inference: COORDINATES: protein motif:HMM:NF021067.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TdeIII family type II restriction endonuclease
SIO_010081: H0I88_RS00330
subclass of: SO_0000673
so part of: H0I88_RS00330
location: complement(80317..81086)
location: region:80317-81086:-1
so has part: feature:80317-81086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80317-81086:-1:exon

H0I88_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00335
old locus tag: TGRD_041
old locus tag: TGRD_RS00335
so part of: sequence
location: complement(81087..82700)
location: region:81087-82700:-1
so has part: feature:81087-82700:-1:exon
subclass of: SO_0000010

position:81087:-1
position: 81087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82700:-1
position: 82700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81087-82700:-1:exon

H0I88_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00335
old locus tag: TGRD_041
old locus tag: TGRD_RS00335
inference: COORDINATES: protein motif:HMM:NF013704.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MIFCIIIFIMEENIEYLTIKEASLWATNYLGKEITASNISYLIQYGRIHKIGHNGSTQILKSELIKYYHSLNQSRENAWKNKLGQDLNWKLSFDNLKESDTTKHIHRLHPYKGKFIPQLAEYFLDDHIDEFKKEKYFNKNDIILDPFCGSGTTLAQADELGMHAIGVDVSYFNSFITNCKINTYDVVSLEKNINIITERLFENHKFSKDIEFEQVLIEKLKKFNDKYFPAPKFKHKIKQNLIDENKCGRKKENLFLPVYKDLLMKYKIELLKQNPKTFMDKWYFKNVTNEINFVFEEIKKIKNSINKNISALILSRTMRSCRATTHSDLATLTEPVSEIYYCSKHGKICKPVFSIMKWWKTYSKDTIKRIKEFEKLKAGTLHYCLPGDARTIDIISALSKKQKSFADILNRQKNSGIFSSPPYVGLIDYHEQHAYAYDLLDFERKDELEIGSLFKGQGREAQKSYAEGISDVLNNCKKYLKENYNVFLVANDKYNLYSEIAQKAGMKIANTFKRPVLNRTEKDKGAYSEIIFHLKEK
SIO_010081: H0I88_RS00335
subclass of: SO_0000673
so part of: H0I88_RS00335
location: complement(81087..82700)
location: region:81087-82700:-1
so has part: feature:81087-82700:-1:exon

WP_198407707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81087-82700:-1:exon

H0I88_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00340
old locus tag: TGRD_RS00340
so part of: sequence
location: 83025..83225
location: region:83025-83225:1
so has part: feature:83025-83225:1:exon
subclass of: SO_0000010

position:83025:1
position: 83025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83225:1
position: 83225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83025-83225:1:exon

H0I88_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00340
old locus tag: TGRD_RS00340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVRRYYTNFCTSLIFEEQLMGIKYIKNKFGPTPVDFAKIIQQMQEAGDCEEIKSEYYYEQIKILA
SIO_010081: H0I88_RS00340
subclass of: SO_0000673
so part of: H0I88_RS00340
location: 83025..83225
location: region:83025-83225:1
so has part: feature:83025-83225:1:exon

WP_095558648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83025-83225:1:exon

H0I88_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00345
old locus tag: TGRD_RS00345
so part of: sequence
location: 83218..83439
location: region:83218-83439:1
so has part: feature:83218-83439:1:exon
subclass of: SO_0000010

position:83218:1
position: 83218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83439:1
position: 83439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83218-83439:1:exon

H0I88_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00345
old locus tag: TGRD_RS00345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF4065 domain-containing protein
translation: MPKRPADLSGLSERERRHIDVTLDKYSNKSAKALSDLSHEDIPWISAKDGEVIDYESVFYRTDATSVRSYEAD
SIO_010081: H0I88_RS00345
subclass of: SO_0000673
so part of: H0I88_RS00345
location: 83218..83439
location: region:83218-83439:1
so has part: feature:83218-83439:1:exon

WP_095558649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83218-83439:1:exon

H0I88_RS06350
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06350
so part of: sequence
location: 83426..83557
location: region:83426-83557:1
so has part: feature:83426-83557:1:exon
subclass of: SO_0000010

position:83426:1
position: 83426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83557:1
position: 83557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83426-83557:1:exon

H0I88_RS06350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLINYSQISEFYKDFKKLLKKFSTLEEDFETMKKSAIEIISS
SIO_010081: H0I88_RS06350
subclass of: SO_0000673
so part of: H0I88_RS06350
location: 83426..83557
location: region:83426-83557:1
so has part: feature:83426-83557:1:exon

WP_269763542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83426-83557:1:exon

H0I88_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00350
old locus tag: TGRD_RS00350
so part of: sequence
location: 83619..83804
location: region:83619-83804:1
so has part: feature:83619-83804:1:exon
subclass of: SO_0000010

position:83619:1
position: 83619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83804:1
position: 83804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83619-83804:1:exon

H0I88_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00350
old locus tag: TGRD_RS00350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVRKMACKFLKGKGGRSGLRVIYVFEQKEKKVTFIEMYYKSEQENENKKRLSAFIEKNFG
SIO_010081: H0I88_RS00350
subclass of: SO_0000673
so part of: H0I88_RS00350
location: 83619..83804
location: region:83619-83804:1
so has part: feature:83619-83804:1:exon

WP_095558650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83619-83804:1:exon

H0I88_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: alaS
locus tag: H0I88_RS00355
old locus tag: TGRD_042
old locus tag: TGRD_RS00355
so part of: sequence
location: complement(84148..86781)
location: region:84148-86781:-1
so has part: feature:84148-86781:-1:exon
subclass of: SO_0000010

position:84148:-1
position: 84148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86781:-1
position: 86781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84148-86781:-1:exon

H0I88_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: alaS
locus tag: H0I88_RS00355
old locus tag: TGRD_042
old locus tag: TGRD_RS00355
EC number: 6.1.1.7
inference: COORDINATES: protein motif:HMM:TIGR00344.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MDKLSSKIRAEFLGFFKNSGCAVVPSDSLIPAGDKTLLFTSAGMVQFKQHFLGQSKDSFTRATSCQKCFRTSDIDQVGTTARHLTFFEMLGNFSFGDYFKKEAAAWAWEFLTKNMSLPKDKLYITIYKDDDEVAGIWKNIAPANKIIKMDEKTNFWNMGETGPCGPCSEILIDLGQETGCGSPACCPECNCDRYLEIWNLVFTQFDKQPDGSLKNLPRKNIDTGMGLERLSATVNGRKNVFDTDLFMPVMENAAEILKIKNEGSNISKLRMIADHSRAITFLISDGILPSNEGRGYVLRRILRRALRQGKFYGYNKPYINELVSDVLKIMEGAYPELSSKLSNIRSIVKTEEEKFLETLESGSEILSSLINSYKSKDINIISGKDVFKLYDTYGFPHDLTKEMAFENGLEIDEDKFKFEQKKAQEKSRVAWCGSGERDITFYSILRKKTGDTVFTGYDNYASESRVLALIKDGSEISELKTGDNGEIILSHSSFYAQSGGQSDDKGKIANNSFESIVEYIFKPAGNLFVHKVKVLKGLIKINDAVSTIIDIERRKQIARHHTAAHLLHKALREAFGGHITQAGSLVARDYFRFDFTHFSALKKDDLIKIEKRVNSIIRLNSEVCIETMAIAKARNAGAMALFGEKYGDEVRTVLIKNESGDGNYSMELCGGTHVSRTGDIGIFKIISESSAAAGVRRIEAVAGIAAENYILDEEAVIIKTSKILNASKEELVNKAHKYTSDYKKLENEFKSLKSSLISGEIDSYAKEVKKINGINFLSVIADKADIKALRTISDQLKEKLKSAVLLIVSKNEDRASFILSATADCVQKGINAGKIAKAFAASINGSAGGKPDFAQGGSKDLSNLNDAVKNAHKYILL
SIO_010081: H0I88_RS00355
subclass of: SO_0000673
so part of: H0I88_RS00355
location: complement(84148..86781)
location: region:84148-86781:-1
so has part: feature:84148-86781:-1:exon

WP_015423054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84148-86781:-1:exon

H0I88_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00360
old locus tag: TGRD_043
old locus tag: TGRD_RS00360
so part of: sequence
location: complement(88019..89971)
location: region:88019-89971:-1
so has part: feature:88019-89971:-1:exon
subclass of: SO_0000010

position:88019:-1
position: 88019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89971:-1
position: 89971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88019-89971:-1:exon

H0I88_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00360
old locus tag: TGRD_043
old locus tag: TGRD_RS00360
inference: COORDINATES: protein motif:HMM:NF024116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MacB family efflux pump subunit
translation: MKAIEIKNLKKTYHLEKLDVPVLHGINLEIMQGEFVAIMGQSGSGKSTLLNILGLLDKPSEGSYKLAGIETLNYSNNELATLRNRYLGFIFQQFNLLPKLTLSENVSLPAIYTDSKDKEEFEDSLKLLDMVGLSERIKHRPSEVSGGQQQRAAIARSLINKPLIIFADEPTGNLDTKSAKEIIKILKDLNNTGITIVMVTHEAELADCATKIVKIQDGLIISDKKISEKSSSNPVFQKKTFKHNTFSLVKKFRDYFKEALRSLLGNKMRSILSVLGITMGVASLIAMFAIVNGAKRNITKYIENLGKPDILMVIPSLSQNDKYLKLNINDIDDLKRNVSGVRTVSGGCGREQLTIVANGKNCGTTLIGVSADYADLKNYYISDGRFFTEEENREKKKVAVLGKTVIKKLYGDENFNPTGKYVKINKTDFQVIGVLPSKSSNEWRDEDDKVIIPLNTALYRMFGIKELGFMDVQVKKDADMSEVSESIIKRLLFIHRLPADEKDAVRVINMEEIKKTLSSVTRTFTYLFGSIAFISLLIGGIGIMNIMFVSVSERTKEIGLRKAIGANNADILFQFIIESVFVCCVGGIIGILFGSGLSVIMGKFAGWTIYITPFSIGFAFCFSGLIGLIFGVWPARKASILNPIDALRHD
SIO_010081: H0I88_RS00360
subclass of: SO_0000673
so part of: H0I88_RS00360
location: complement(88019..89971)
location: region:88019-89971:-1
so has part: feature:88019-89971:-1:exon

WP_015423055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88019-89971:-1:exon

H0I88_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00365
old locus tag: TGRD_044
old locus tag: TGRD_RS00365
so part of: sequence
location: complement(90128..91033)
location: region:90128-91033:-1
so has part: feature:90128-91033:-1:exon
subclass of: SO_0000010

position:90128:-1
position: 90128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91033:-1
position: 91033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90128-91033:-1:exon

H0I88_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00365
old locus tag: TGRD_044
old locus tag: TGRD_RS00365
inference: COORDINATES: protein motif:HMM:NF024829.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKKFILITILLAVAATAVFLIFKFKPSKQVIDKETTLTPRNLYLELRENGVVNPRNRLEVKSSFNGRIEKILVNEGDKIKKGQIIILMSSSERASMVDAARTISEQEYEKYQNIYKPTPIIAYMDGFIILRQKEPGHDVSSNEVILAMADDLIVKAYIDETDLRYIKKGIRTKMYLDAYPDENFEGIVEHISYESKLLNNVNVYEIRIKPLKKPKAFKSGMTVTVMIIAEFKKNAPAIANTFISEIGDTKTVTVKTGNINKPTLEKREIKTGISDGIFTEILSGLNQDETVVTFKPVKEKN
SIO_010081: H0I88_RS00365
subclass of: SO_0000673
so part of: H0I88_RS00365
location: complement(90128..91033)
location: region:90128-91033:-1
so has part: feature:90128-91033:-1:exon

WP_015423056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90128-91033:-1:exon

H0I88_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00370
old locus tag: TGRD_045
old locus tag: TGRD_RS00370
so part of: sequence
location: complement(91035..92255)
location: region:91035-92255:-1
so has part: feature:91035-92255:-1:exon
subclass of: SO_0000010

position:91035:-1
position: 91035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92255:-1
position: 92255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91035-92255:-1:exon

H0I88_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00370
old locus tag: TGRD_045
old locus tag: TGRD_RS00370
inference: COORDINATES: protein motif:HMM:NF014385.2
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MKKIFVVLLSLFIVTFYVYAEEINKKTVKIQTLKNNPSIAAAKLALDNAKQEYNSSLGSFLPKIIGNFQCNDDYPYTLEIAIPLFERFETYSDLKAKASEFKSAQASYARIVSNELYKADAAYINLICLYEKIELLKNAKEKRIENKNMIEFKYNSGEVNIASLRKVEADFAIVEYDLKVMQRYIETASAQLLKAIGRNDYTTILETNERLAISEKLPQKPDYDSLITVIPEFIIAQNKLESCKIQTLKAKSQWLPSLTGNIQLKSRSLRSLLFSQWLPSLKISYTIFNGGKRYAYMQTASNNLKIASEELKNIANNLKAEAIEHYNNLTNAYELVALKTQYLSVTKLLSEISAKEYVNGIVNYEKWYSIEKDYFSSQIELLEAKKEAVLKRAEWNTFTGKSLKGK
SIO_010081: H0I88_RS00370
subclass of: SO_0000673
so part of: H0I88_RS00370
location: complement(91035..92255)
location: region:91035-92255:-1
so has part: feature:91035-92255:-1:exon

WP_015423057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91035-92255:-1:exon

H0I88_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmH
locus tag: H0I88_RS00375
old locus tag: TGRD_046
old locus tag: TGRD_RS00375
so part of: sequence
location: 92798..92932
location: region:92798-92932:1
so has part: feature:92798-92932:1:exon
subclass of: SO_0000010

position:92798:1
position: 92798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92932:1
position: 92932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92798-92932:1:exon

H0I88_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmH
locus tag: H0I88_RS00375
old locus tag: TGRD_046
old locus tag: TGRD_RS00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPNRARRKKKIGFRARMDTSGGRRILSARRRKGRKTISA
SIO_010081: H0I88_RS00375
subclass of: SO_0000673
so part of: H0I88_RS00375
location: 92798..92932
location: region:92798-92932:1
so has part: feature:92798-92932:1:exon

WP_015423058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92798-92932:1:exon

H0I88_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rnpA
locus tag: H0I88_RS00380
old locus tag: TGRD_047
old locus tag: TGRD_RS00380
so part of: sequence
location: 92942..93361
location: region:92942-93361:1
so has part: feature:92942-93361:1:exon
subclass of: SO_0000010

position:92942:1
position: 92942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93361:1
position: 93361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92942-93361:1:exon

H0I88_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rnpA
locus tag: H0I88_RS00380
old locus tag: TGRD_047
old locus tag: TGRD_RS00380
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:TIGR00188.1
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MRAENKKNLSGSLFPENSAGKKFSFTYFERLHIQKDFDKIFKNGLRLENKNIKILVYKRNDGHIIRRLGLITTKRVGAAVIRNRTKRRLREIFRTNKHFLESGLDLIFISKPGTALLDYDSLKKNILGLLKSAELYNPE
SIO_010081: H0I88_RS00380
subclass of: SO_0000673
so part of: H0I88_RS00380
location: 92942..93361
location: region:92942-93361:1
so has part: feature:92942-93361:1:exon

WP_015423059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92942-93361:1:exon

H0I88_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: yidD
locus tag: H0I88_RS00385
old locus tag: TGRD_048
old locus tag: TGRD_RS00385
so part of: sequence
location: 93365..93589
location: region:93365-93589:1
so has part: feature:93365-93589:1:exon
subclass of: SO_0000010

position:93365:1
position: 93365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93589:1
position: 93589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93365-93589:1:exon

H0I88_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: yidD
locus tag: H0I88_RS00385
old locus tag: TGRD_048
old locus tag: TGRD_RS00385
inference: COORDINATES: protein motif:HMM:NF013932.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertion efficiency factor YidD
translation: MKQIALFLIKCYKFISQFLPSICRFQPSCSTYAYQAIETYGFFKGSLLTFKRIIRCRPFCAGGFDPVPLPKKKI
SIO_010081: H0I88_RS00385
subclass of: SO_0000673
so part of: H0I88_RS00385
location: 93365..93589
location: region:93365-93589:1
so has part: feature:93365-93589:1:exon

WP_015423060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93365-93589:1:exon

H0I88_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: yidC
locus tag: H0I88_RS00390
old locus tag: TGRD_049
old locus tag: TGRD_RS00390
so part of: sequence
location: 93609..95168
location: region:93609-95168:1
so has part: feature:93609-95168:1:exon
subclass of: SO_0000010

position:93609:1
position: 93609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95168:1
position: 95168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93609-95168:1:exon

H0I88_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: yidC
locus tag: H0I88_RS00390
old locus tag: TGRD_049
old locus tag: TGRD_RS00390
inference: COORDINATES: protein motif:HMM:TIGR03593.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0051205 - protein insertion into membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MQKNSILFVTLSAFTVFIWYFFFAQPSEQSYRQMMQLQNTVAVSESGVNKFKNADLNEFQIDDIYAKEEHINIETEQYKAVLTNKGGGVLSWSVKEKNGQWVDLVFPESAPVMANFPNLTYKVVSKSAEKIVFEYASKEGWKITKIYNLSDLYMHNLNISVEKNAKTPFPQIDLKWGPGLGTDSKELKENISLTRALVYTAVKPNKLKKLKDNFEPASLCKWTAVDNRYFLVAFIPKNSMDFDKILFSRLEKKHPCSVILKAAEPKDVDKKDYSVNFYLGPKDYKYLKTYDLGLEKTVDFGFFGFLGKIAFSILVFFYKLTHNYGWAIIMLTTIIQILVLPLTLKSFKSSAAMKRVQPVIKDIQTKYKDNPQRLKAEMLNIYQSQKVNPLGGCLPMLLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQFMQFGSFNLNLLPLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLVLYWLTNSLISMIEQYFIMKKDAITVKHI
SIO_010081: H0I88_RS00390
subclass of: SO_0000673
so part of: H0I88_RS00390
location: 93609..95168
location: region:93609-95168:1
so has part: feature:93609-95168:1:exon

WP_015423061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93609-95168:1:exon

H0I88_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00395
old locus tag: TGRD_pseudo_19
old locus tag: TGRD_RS00395
so part of: sequence
location: 95225..95458
location: region:95225-95458:1
so has part: feature:95225-95458:1:exon
subclass of: SO_0000010

position:95225:1
position: 95225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95458:1
position: 95458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95225-95458:1:exon

H0I88_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00395
old locus tag: TGRD_pseudo_19
old locus tag: TGRD_RS00395
inference: COORDINATES: protein motif:HMM:NF026154.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Jag N-terminal domain-containing protein
translation: MSEIEFKGKNVMEAITNGLTQLGCNKEDVKIKIVSEGSTGLFGLMGAKPAVVLISVDDSKCGNKTFFSSDYKKSAKK
SIO_010081: H0I88_RS00395
subclass of: SO_0000673
so part of: H0I88_RS00395
location: 95225..95458
location: region:95225-95458:1
so has part: feature:95225-95458:1:exon

WP_095558651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95225-95458:1:exon

H0I88_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00400
old locus tag: TGRD_050
old locus tag: TGRD_RS00400
so part of: sequence
location: 95586..95954
location: region:95586-95954:1
so has part: feature:95586-95954:1:exon
subclass of: SO_0000010

position:95586:1
position: 95586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95954:1
position: 95954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95586-95954:1:exon

H0I88_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00400
old locus tag: TGRD_050
old locus tag: TGRD_RS00400
inference: COORDINATES: protein motif:HMM:NF024773.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA-binding protein
translation: MDRNKLIAIVGVSENPDKTGFKIFTDLLRAGFKVAAVGIRGGAIAGKRVYKSLKDLPAKPDMILTVVPPAGTDKTVDDAIDLGIKEIWMQPGSQSETAVQRAKAVGMKVTESGCFMLVHGIW
SIO_010081: H0I88_RS00400
subclass of: SO_0000673
so part of: H0I88_RS00400
location: 95586..95954
location: region:95586-95954:1
so has part: feature:95586-95954:1:exon

WP_015423062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95586-95954:1:exon

H0I88_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00405
old locus tag: TGRD_051
old locus tag: TGRD_RS00405
so part of: sequence
location: 96075..96836
location: region:96075-96836:1
so has part: feature:96075-96836:1:exon
subclass of: SO_0000010

position:96075:1
position: 96075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96836:1
position: 96836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96075-96836:1:exon

H0I88_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00405
old locus tag: TGRD_051
old locus tag: TGRD_RS00405
inference: COORDINATES: protein motif:HMM:NF024811.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family phosphatase
translation: MLFYNLDKYDCKREYMYKVVSSFSKKSKQMNKKSKKFKTKSFKAVLFDMDGVIADSMPYHFISWFEVLKQHNVRINPMIIFEMEGAKWDKVIKLAFKQSGIPLFQQATQKIRKKREQIFNQYFKRYIFTGIPEFIKSLKNKGVLVGLVTGSSLKEAQKMLPEYIYKLFDTIIAGDGVKRGKPYPDPYLAAAKNLKVLSKECMVIENAPYGIKSAKAAKMYCCAIATSLSEDLLSEADIIFDTHRDLYEYFEGD
SIO_010081: H0I88_RS00405
subclass of: SO_0000673
so part of: H0I88_RS00405
location: 96075..96836
location: region:96075-96836:1
so has part: feature:96075-96836:1:exon

WP_095558652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96075-96836:1:exon

H0I88_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00410
old locus tag: TGRD_052
old locus tag: TGRD_RS00410
so part of: sequence
location: 97506..98270
location: region:97506-98270:1
so has part: feature:97506-98270:1:exon
subclass of: SO_0000010

position:97506:1
position: 97506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98270:1
position: 98270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97506-98270:1:exon

H0I88_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00410
old locus tag: TGRD_052
old locus tag: TGRD_RS00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSKVIAIANQKGGVGKTTTAINFTASLAYMGHESLLIDMDPQSNTTSGFGINKNNLEKNIYNVLINDVALEDILQDTIMDRLDIVPATTSLSGAEVDLVNMSDRGKRLKFALEKFHKIYKYIIIDCPPSLGLLTINSLVAADTVLIPMQCEFFSLEGLGQLSETISALMQSYDLELEGVLFTMFDSRTNLADQVVEEVKKFFKEKVYETKIPRTIKLAEAPSFGKPVLLYDPSGKGSQAYIDFAKEFLLKQNME
SIO_010081: H0I88_RS00410
subclass of: SO_0000673
so part of: H0I88_RS00410
location: 97506..98270
location: region:97506-98270:1
so has part: feature:97506-98270:1:exon

WP_015423064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97506-98270:1:exon

H0I88_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00415
old locus tag: TGRD_053
old locus tag: TGRD_RS00415
so part of: sequence
location: 98308..99168
location: region:98308-99168:1
so has part: feature:98308-99168:1:exon
subclass of: SO_0000010

position:98308:1
position: 98308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99168:1
position: 99168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98308-99168:1:exon

H0I88_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00415
old locus tag: TGRD_053
old locus tag: TGRD_RS00415
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MQKKALGRGLESLIPALAANKASTDEIIIIIPLDKIKSNRFQPRNKFDEVKLQELARSIEKHGLAQPILVAASIVPGEYEIIAGERRYRASKLAGNKDIKAIVKQSADDKQRFDLALVENIQRENLDPIEEARAFKRLIEEFGHTHEQISDIVGKERSVISNALRLLSLPEDVQLLITEDKISPGHGKILAGIEDKNRIRAIVDRILNENLSVRAVEKIISELKPEKESDGQKKQEIELINLKEEIQRKLGTKVNISGTGKKGRIEIYYYSLEDLERITKELKFSC
SIO_010081: H0I88_RS00415
subclass of: SO_0000673
so part of: H0I88_RS00415
location: 98308..99168
location: region:98308-99168:1
so has part: feature:98308-99168:1:exon

WP_015423065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98308-99168:1:exon

H0I88_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00420
old locus tag: TGRD_054
old locus tag: TGRD_RS00420
so part of: sequence
location: 99372..100787
location: region:99372-100787:1
so has part: feature:99372-100787:1:exon
subclass of: SO_0000010

position:99372:1
position: 99372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100787:1
position: 100787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99372-100787:1:exon

H0I88_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00420
old locus tag: TGRD_054
old locus tag: TGRD_RS00420
inference: COORDINATES: protein motif:HMM:NF017754.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MKKLNLDYSLLSKKTNIKNMGAEALKKVADATAAMPNTTPQEAVNMKSNIDIEINDEFKQAYDLIDKSGNCVFITGSAGSGKTTFLRYYTMRASKKTVILAPTGVAALNCGGETVHSFFYFKPDITVSKIKKKKLSEKSIYKKVETIIIDEASMLRCDILDCIDKFLRLNREKRQEPFGGVQMVFIGDLKQLPPVVKREEYHIFNSVYKSPYFLSAYSLNKCILHTVELKKIYRQRDSNFVALLNAVRDGTANDDEIAELNKKVSSQIFNRPMTVYLTTTNKKAAFINHKYLSEIEYKQVVFTAETKNIEENSKVFPAEYELVIKKNAQVMMLNNDAKNRWVNGSIGIVENIKSGSDFGKLSICIRFPNGRVENVEPYKWELFKYGWNEEKKQIETYRAGFFKQYPLRLSWAITIHKSQGKTFDNVIIDMEYGAFAPGQLYVALSRCTSFDGITLSRPLTKRDILAPAVWD
SIO_010081: H0I88_RS00420
subclass of: SO_0000673
so part of: H0I88_RS00420
location: 99372..100787
location: region:99372-100787:1
so has part: feature:99372-100787:1:exon

WP_095558653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99372-100787:1:exon

H0I88_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00425
old locus tag: TGRD_RS00425
old locus tag: TGRD_tRNA04
so part of: sequence
location: 101025..101111
location: region:101025-101111:1
so has part: feature:101025-101111:1:exon
subclass of: SO_0000663

position:101025:1
position: 101025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101111:1
position: 101111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101025-101111:1:exon

H0I88_RS00425
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00425
old locus tag: TGRD_RS00425
old locus tag: TGRD_tRNA04
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:101059..101061,aa:Ser,seq:gga)
SIO_010081: H0I88_RS00425
subclass of: SO_0000673
so part of: H0I88_RS00425
location: 101025..101111
location: region:101025-101111:1
so has part: feature:101025-101111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101025-101111:1:exon

H0I88_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00430
old locus tag: TGRD_055
old locus tag: TGRD_RS00430
so part of: sequence
location: 101786..102286
location: region:101786-102286:1
so has part: feature:101786-102286:1:exon
subclass of: SO_0000010

position:101786:1
position: 101786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102286:1
position: 102286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101786-102286:1:exon

H0I88_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00430
old locus tag: TGRD_055
old locus tag: TGRD_RS00430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKVQEIEYKKIREKLADREYRIGLDLGVGSIGYVVVSLKECNDLSYLPEDIILSGSRIFKSSIGAVERREFRLQRNSHRHHRERMRFLWQLLAEKQLALQSSKDLEKKENSADCETSQKRFPINILKEDPYILRYKALEEKLSLFQLGYVLYHIANHSNTAYENT
SIO_010081: H0I88_RS00430
subclass of: SO_0000673
so part of: H0I88_RS00430
location: 101786..102286
location: region:101786-102286:1
so has part: feature:101786-102286:1:exon

WP_015423067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101786-102286:1:exon

H0I88_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00435
old locus tag: TGRD_056
old locus tag: TGRD_RS00435
so part of: sequence
location: 102302..105400
location: region:102302-105400:1
so has part: feature:102302-105400:1:exon
subclass of: SO_0000010

position:102302:1
position: 102302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105400:1
position: 105400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102302-105400:1:exon

H0I88_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00435
old locus tag: TGRD_056
old locus tag: TGRD_RS00435
inference: COORDINATES: protein motif:HMM:NF037268.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease domain-containing protein
translation: MLYHIANHRGTDSVRSFLEYDDDKIKENTLTAKIAKETKKVIDAKKYRTFGEYLYKGKIEKFQQNIRKKVSNRKTPANKNKEFAVTRDVIIKETEKILASQKQYYTYILTDEYIKKIKDAISYQTEKLIPESGYCPYFKDEKRLPRSHKLNEYRRMYEALNNAKYFDPVLDENTGEILSYQEKEFSREEKKILFDEVLLKGMELTESGAKKLLYHLPDGCEVQLQGRDKTTQKIKGYALVDLEASPFWLRLSQQQQDEFLYDWNSLPLEKLKPKLTNYYSLTESEVDETFQEIKLPSNYASVGKKAMEILLTYIKDGCSYTEALEKAVSEGKLKVDKQTMIYDSLPYYGKILKESTQKLIGKAFSKQFADRNYKEPDTNKNEREFGKIANPVVHQTLNELRKLINEIITVFGKKPLEIGLETTRELKKSKKNREYLSKQQNKNEYARNRIYKEYIEPHLSQIKSRQENPSKYISKFELLEEQNFICPFCSEKITPDDIINSKVDVEHIFPIEESEDITKNNLVIAHNECNADKGKKSPFDAFGDKTSGKYRWNCILHNAQKNLPHKVWRFYQGSLEKFLENKPMSRRFGTDNSYISKIAARYLACLFNDPYHSEIFCIKSSLIAQLRIAWDLNSIMVPLVKNILSEKELEEFKISKNKKIRIDNRHHALDAIVIAYANRGYHNFLNRIHAKEYKINYREKSWLSKILLPPLNRDLEDFKISVKDSIEKANVSIKHDHNTNGSLVKATAYKVYYSGAGEYIITTSKNVEEISFKEKEDPKDTLYRALCKFECRDIDIKDEKLIKKLKYNSTLYKKVQNNLSKAKQELEQDNKKTEEEGKKSQKITEVRIYKKACSLVKGQYIQCGSRLKDKFFAVKEPTEIKTGLGYDTGDNLFLDLYYDKTGKLCGEIIRKVNFNRNKPNYQKEGYTLFERIYQSDILEVDTSEDRISLKNKTGSAPSDRTFIKVNTFTEVNAYFDGKRDKIQIFFGNLLKSSFKNDSFFISSMQKYNVRKVILTSLGIIKYRSQILKNKEV
SIO_010081: H0I88_RS00435
subclass of: SO_0000673
so part of: H0I88_RS00435
location: 102302..105400
location: region:102302-105400:1
so has part: feature:102302-105400:1:exon

WP_015423068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102302-105400:1:exon

H0I88_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas1
locus tag: H0I88_RS00440
old locus tag: TGRD_057
old locus tag: TGRD_RS00440
so part of: sequence
location: 105401..106312
location: region:105401-106312:1
so has part: feature:105401-106312:1:exon
subclass of: SO_0000010

position:105401:1
position: 105401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106312:1
position: 106312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105401-106312:1:exon

H0I88_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas1
locus tag: H0I88_RS00440
old locus tag: TGRD_057
old locus tag: TGRD_RS00440
inference: COORDINATES: protein motif:HMM:TIGR03639.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II CRISPR-associated endonuclease Cas1
translation: MWRIIDISGDGYHICVKNNNFSVLKSNEEKLHANFSDINCIILHGNGITYTNSAIQKCLKNEIPIVFCDETHTPAGMLLPYFNIAEYGKRLEIQLSASQPIRKQAWKQIITEKLINQSACLASFPKSNSKHLQLLDFAREVKTGDNTFREGIGAKIYFGELFDNFYRSNKNEDIINSSLNYGYAVLRSGIARAVVSCGLNPAIGVFHSKNKNPFCLVDDLIEPLRPMVDYIVKSQYDDFIKEKILTPALKRFLVSITEKKLLVENAAYSFVAGLQKYIQSYLAYISKQEKQIIFPKLFYDIKI
SIO_010081: H0I88_RS00440
subclass of: SO_0000673
so part of: H0I88_RS00440
location: 105401..106312
location: region:105401-106312:1
so has part: feature:105401-106312:1:exon

WP_015423069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105401-106312:1:exon

H0I88_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS00445
old locus tag: TGRD_058
old locus tag: TGRD_RS00445
so part of: sequence
location: 106317..106622
location: region:106317-106622:1
so has part: feature:106317-106622:1:exon
subclass of: SO_0000010

position:106317:1
position: 106317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106622:1
position: 106622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106317-106622:1:exon

H0I88_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS00445
old locus tag: TGRD_058
old locus tag: TGRD_RS00445
inference: COORDINATES: protein motif:HMM:TIGR01573.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MWVLIAFDLPVLTQKQRRIASSFREYLKNIGFIMLQKSIYCYYACTKERSDSVEKDIKKHIPDNGHISVLFLTDRMFSMTKNYYGKLKVDISQPELFDNLL
SIO_010081: H0I88_RS00445
subclass of: SO_0000673
so part of: H0I88_RS00445
location: 106317..106622
location: region:106317-106622:1
so has part: feature:106317-106622:1:exon

WP_158302759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106317-106622:1:exon

H0I88_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00450
old locus tag: TGRD_059
old locus tag: TGRD_RS00450
so part of: sequence
location: complement(107149..107973)
location: region:107149-107973:-1
so has part: feature:107149-107973:-1:exon
subclass of: SO_0000010

position:107149:-1
position: 107149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107973:-1
position: 107973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107149-107973:-1:exon

H0I88_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00450
old locus tag: TGRD_059
old locus tag: TGRD_RS00450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MNSIIRKSLLHKTNVEYGDYTINHAEGCSHGCLYPCYAMLMAKRFGKIKIYDDWIKPKIVKNALEILESEIPKYKDKIRFVQLSFTTDPFMCGYNEISEMSYKIIKRLNRENIKCIAITKGILPDKLATLSSNNEFGITLITIKDNFRKKLEPFASPMKKRIKSLYNLHKNGIKTWVSIEPYPTPNIIKQDFDEILKALEFVDKIIFGKLNYNSQVSAYKGCKEFFNETAEKVISFAEKNNKKHYIKKGTITDLNVSKQFSHNFSLYSNPISIF
SIO_010081: H0I88_RS00450
subclass of: SO_0000673
so part of: H0I88_RS00450
location: complement(107149..107973)
location: region:107149-107973:-1
so has part: feature:107149-107973:-1:exon

WP_015423071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107149-107973:-1:exon

H0I88_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tcmP
locus tag: H0I88_RS00455
old locus tag: TGRD_060
old locus tag: TGRD_RS00455
so part of: sequence
location: complement(107990..109105)
location: region:107990-109105:-1
so has part: feature:107990-109105:-1:exon
subclass of: SO_0000010

position:107990:-1
position: 107990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109105:-1
position: 109105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107990-109105:-1:exon

H0I88_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tcmP
locus tag: H0I88_RS00455
old locus tag: TGRD_060
old locus tag: TGRD_RS00455
inference: COORDINATES: protein motif:HMM:TIGR04474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: three-Cys-motif partner protein TcmP
translation: MLKCIYIYLYLVFKNLNNFIDDTMDTKGNIENHSKIKLSIYEKYLKAYLSIMMRLYFTDIFIVEPFAGKGISNNGEEGSAIIAKNVITSISNSSNKNIHLVLNDIKKESYVDLIKNLKPDGNRVLCFNKDANEFINDVLSKADHKTKTNHLFFIDPWGYTQLRGDTYQNIFKAKRLDILIFIPINHIYRFLIKEENSEQLKPIAGFLNDMGIAEEDARKCQDEMSFVNEIKKAFTKKADTDYVYYKELKNTKSNNKYALFFLTKHILGAEKFLEALVKIKEKDLFENTISDEDLPFIENIHKNKSLTNCELYEYGILHGLLPKKVTAILNSYEKDNKITVMPMPEVSNRKKGNFYISYKNKEKPKIKIVFK
SIO_010081: H0I88_RS00455
subclass of: SO_0000673
so part of: H0I88_RS00455
location: complement(107990..109105)
location: region:107990-109105:-1
so has part: feature:107990-109105:-1:exon

WP_095558655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107990-109105:-1:exon

H0I88_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00460
old locus tag: TGRD_061
old locus tag: TGRD_RS00460
so part of: sequence
location: 109198..110598
location: region:109198-110598:1
so has part: feature:109198-110598:1:exon
subclass of: SO_0000010

position:109198:1
position: 109198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110598:1
position: 110598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109198-110598:1:exon

H0I88_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00460
old locus tag: TGRD_061
old locus tag: TGRD_RS00460
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MHPPIFLSHISLYFPGKICFEYFSAQIQAGNRIAIIGNNGTGKSSLLKIIKGDLPASEGEIQNKNVSFGYVPQLIYEYENLSGGEKFNRALSVAFSNHPDILLLDEPTNHLDLKNRRSLIKMLNFYKGTLVVVSHDTELLRSSIDILWRIDNGKVSVFNGKYDDYRQTIMQERQNIENELEFLAKEKKENHKALMKEQQRAKKNKERGRKFVERKKWLPALGDLNQSYAQKTTGKNKGSISNKRKILNERLSSLRLPEIIKPSFSLTAKNIASKTIVSISSGQTAYGHKIISKDINLSVTGSEHLAVTGGNGSGKTTLFRAILNYPQIKKTGVWDLPRSEDIGYLDQCYSSLNDIKTVLETLADLSPEKTHAEIRDFLNDFLFRKNEEVNKQVSVLSGGEKARLSLAKIALQTPRLLLIDEITNNIDLETKEHVTQALKEYPGAMIIISHDSAFLENIGITHYYKL
SIO_010081: H0I88_RS00460
subclass of: SO_0000673
so part of: H0I88_RS00460
location: 109198..110598
location: region:109198-110598:1
so has part: feature:109198-110598:1:exon

WP_015423073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109198-110598:1:exon

H0I88_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00465
old locus tag: TGRD_062
old locus tag: TGRD_RS00465
so part of: sequence
location: complement(110619..111863)
location: region:110619-111863:-1
so has part: feature:110619-111863:-1:exon
subclass of: SO_0000010

position:110619:-1
position: 110619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111863:-1
position: 111863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110619-111863:-1:exon

H0I88_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00465
old locus tag: TGRD_062
old locus tag: TGRD_RS00465
inference: COORDINATES: protein motif:HMM:NF013316.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: U32 family peptidase C-terminal domain-containing protein
translation: MKKPELLLPAGSLSKLKTAFLYGADAVYAGIPEMSLRVKSEFLLEEMEEGISFAHNIEKKVYLTLNLFSHNKDVERLEKFAKTLKTLNPDGIIISDPGIFQYVKKEIPQIPIHISTQANICSWLTADFWKNLGAELCVLGREISFSEIREIREKCREIKLEIFIHGSMCVSYSGRCLMSAFMASRSANQGACAHSCRWKYKSRLLLEEELRPGEYLEMEEDDKGSYVLNSKDLCLMPKLDKIISIGIDSLKIEGRNKSEYYAAQTARVYRKAIDDYFDNPGSWHPDEYMKELITLQNRGYTIGFFDGMPGIEAQDYIDTSSKSNYRNAGVIKSSANGFLTIELRNKLKKGAEIEILSPFKFKPVKIILNEIYNKDNNNLIEELAPGKASQSVKIPVDGDLSVFPENTIIRIKTV
SIO_010081: H0I88_RS00465
subclass of: SO_0000673
so part of: H0I88_RS00465
location: complement(110619..111863)
location: region:110619-111863:-1
so has part: feature:110619-111863:-1:exon

WP_015423074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110619-111863:-1:exon

H0I88_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00470
old locus tag: TGRD_RS05810
so part of: sequence
location: 112867..113040
location: region:112867-113040:1
so has part: feature:112867-113040:1:exon
subclass of: SO_0000010

position:112867:1
position: 112867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113040:1
position: 113040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112867-113040:1:exon

H0I88_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00470
old locus tag: TGRD_RS05810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEGSRVVAWKLGVYVVALIGYCKIYYNIGGGGNSLFPVPRGKGRKVKRCYKNKKIC
SIO_010081: H0I88_RS00470
subclass of: SO_0000673
so part of: H0I88_RS00470
location: 112867..113040
location: region:112867-113040:1
so has part: feature:112867-113040:1:exon

WP_158302760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112867-113040:1:exon

H0I88_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00475
old locus tag: TGRD_RS06205
so part of: sequence
location: complement(113689..113835)
location: region:113689-113835:-1
so has part: feature:113689-113835:-1:exon
subclass of: SO_0000010

position:113689:-1
position: 113689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113835:-1
position: 113835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113689-113835:-1:exon

H0I88_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00475
old locus tag: TGRD_RS06205
inference: COORDINATES: protein motif:HMM:NF039193.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5679 domain-containing protein
translation: MAEARCMKCKKQVEVKDPQDVVMKNGIKAVSGVCPHCSTKVFKIVGKK
SIO_010081: H0I88_RS00475
subclass of: SO_0000673
so part of: H0I88_RS00475
location: complement(113689..113835)
location: region:113689-113835:-1
so has part: feature:113689-113835:-1:exon

WP_172412799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113689-113835:-1:exon

H0I88_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00480
old locus tag: TGRD_RS00470
old locus tag: TGRD_tRNA05
so part of: sequence
location: complement(113883..113953)
location: region:113883-113953:-1
so has part: feature:113883-113953:-1:exon
subclass of: SO_0000663

position:113883:-1
position: 113883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113953:-1
position: 113953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113883-113953:-1:exon

H0I88_RS00480
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00480
old locus tag: TGRD_RS00470
old locus tag: TGRD_tRNA05
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(113919..113921),aa:Gly,seq:ccc)
SIO_010081: H0I88_RS00480
subclass of: SO_0000673
so part of: H0I88_RS00480
location: complement(113883..113953)
location: region:113883-113953:-1
so has part: feature:113883-113953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113883-113953:-1:exon

H0I88_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00485
old locus tag: TGRD_063
old locus tag: TGRD_RS00475
so part of: sequence
location: complement(114009..115454)
location: region:114009-115454:-1
so has part: feature:114009-115454:-1:exon
subclass of: SO_0000010

position:114009:-1
position: 114009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115454:-1
position: 115454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114009-115454:-1:exon

H0I88_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00485
old locus tag: TGRD_063
old locus tag: TGRD_RS00475
inference: COORDINATES: protein motif:HMM:NF025112.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MNKLIKKINNLSKDFDIYATGGFSRDLLLKRSPIDIDLAVSRNALKYSKKIADVFNSKLITLNDTRKTYRIILKDDVITNIDISLFNGKTIKQDLQNRDFTINATAFNLKNFKNFKKHIILSDRNTLRDLKSKIVNTVSAESFKTDPLRMLRAFRFAAELNFKISKKTFKQIIKNAKLIRQSAPERIKNEFFRVLSVKNSAALIKDMDDCGLLSEIFAEIKKMKKTCRKYYYHPGGLFQHSFETVESAENILNNLKKYFPENYADMQKHFDNNATFSENITRESLLKFAALFHDSAKPETAKFENGKMHFLGHEELGAGKVKEIMLSLKSSKNDIETAVFLVSNHMRPSTLTRNNIVTKKAALKFFRDIGDNTPDLLVLSMSDWHSYKKLKVFSSKGLKLQEKSVRELLKYYYELKNAEPLSKIIDGNIIMKKFNLKPGPWIGELLNFATETQLEGTIFNTDEALKIVFSKLTHIKKKYKL
SIO_010081: H0I88_RS00485
subclass of: SO_0000673
so part of: H0I88_RS00485
location: complement(114009..115454)
location: region:114009-115454:-1
so has part: feature:114009-115454:-1:exon

WP_015423075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114009-115454:-1:exon

H0I88_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00490
old locus tag: TGRD_064
old locus tag: TGRD_RS00480
so part of: sequence
location: complement(115482..116705)
location: region:115482-116705:-1
so has part: feature:115482-116705:-1:exon
subclass of: SO_0000010

position:115482:-1
position: 115482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116705:-1
position: 116705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115482-116705:-1:exon

H0I88_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00490
old locus tag: TGRD_064
old locus tag: TGRD_RS00480
inference: COORDINATES: protein motif:HMM:NF017044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MESFRLSNNIKVVFNKTSGINVVSMRIFTPVSVINETSDNAGISYLTAKLMTQSTKNRSNEILANETESIGADLSGDADYDTALLSMTFLSEYFDKAADILADAVLNPAFDEKELSFEKQNVIAALSCRRDNIGNIAYDEFAKLFYHNTSYAMPVLGAKETVSKISCKDLADWHRYSYNTSNILISVAGNIGKNIVKESLEKYFASVPDGKKVEKPVFNIKQHESIKKEIKGKFNQAYIYTGFPAPAISSKDFVSIKVANAILGGKMTSRLFVELRENLGLAYEVGAVYTPRKAESYLAVYIGLDKKNIELTLKKTDKILKDFCTLKVDEEELKNTKTYIKGLYIMSRQTVSKQSYYYGWREIVGQGCEYDNEYLKQMEKITAQNILDAINKVFLSHSVSVIVNPAA
SIO_010081: H0I88_RS00490
subclass of: SO_0000673
so part of: H0I88_RS00490
location: complement(115482..116705)
location: region:115482-116705:-1
so has part: feature:115482-116705:-1:exon

WP_015423076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115482-116705:-1:exon

H0I88_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00495
old locus tag: TGRD_065
old locus tag: TGRD_RS00485
so part of: sequence
location: complement(116810..118033)
location: region:116810-118033:-1
so has part: feature:116810-118033:-1:exon
subclass of: SO_0000010

position:116810:-1
position: 116810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118033:-1
position: 118033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116810-118033:-1:exon

H0I88_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00495
old locus tag: TGRD_065
old locus tag: TGRD_RS00485
inference: COORDINATES: protein motif:HMM:NF017044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MKYENGLTSILINNKNTLTATAIVFVRVGSVDEKPFQSGLSHFLEHLMFKGSKNYRGDLMGRNVENMGGYINAATAKEFTMYYINIQKDGLGESIKMLADAMQNPLFPQDEIDRERKVVIEEIQRHSDNPAAVIYEKFYETVYEASALKNSIIGTPQVVANVSREEIYGYYKTHYIPAKMIVVVSGNFDETAVEKLIGETFGKFEEQSASPDPMLFEKVHDGKDIIEYGKVETGYMLTGFLGPAINEEDIYTADTAVNILGSGKSSRLYKALYEKKHLVYSTDSYFMTEKGTGNICIISVFDSKNLKKIKDEIKKQIEYIIDGGIAEEELNRATLSIKTNWNFSLETPFGTADNIGYWHLMDNPKFVTEHMKKIESMTVSDIINFFKKYYSPATVSNIALLPSAATV
SIO_010081: H0I88_RS00495
subclass of: SO_0000673
so part of: H0I88_RS00495
location: complement(116810..118033)
location: region:116810-118033:-1
so has part: feature:116810-118033:-1:exon

WP_015423077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116810-118033:-1:exon

H0I88_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00500
old locus tag: TGRD_066
old locus tag: TGRD_RS00495
so part of: sequence
location: complement(119220..120638)
location: region:119220-120638:-1
so has part: feature:119220-120638:-1:exon
subclass of: SO_0000010

position:119220:-1
position: 119220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120638:-1
position: 120638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119220-120638:-1:exon

H0I88_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00500
old locus tag: TGRD_066
old locus tag: TGRD_RS00495
inference: COORDINATES: protein motif:HMM:NF012312.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MAQNETLSDAGTTNQKMTNYRWTICALLFFATTINYVDRQVLSLLQPYLSEKFHWTYSDYANITSAFQFCYAIALLFAGRFIDRLGTKKGYAWALILWSIGSMIHAFANGIGNALSPLLSVFGIVMMPVSVVGFIFARFVLGVGESGNFPSAIKTTAEWFPKKERSFATGIFNSGANIGAVVAPLSVPLIAEYFGWEYAFIIVGATGFLWIVFWKYYYDSPEKLLKKRKINKAEYNYIHSDTKEQPVENDVKEKSSKNKVRWFRLLSYRQTWSFVIGKFFTDCVWWFFLFWLPVFLKSYYGMAGTQLMMPLAVLYTMTMMGSIGGGWLPAYFVNKGMNMYPARMAAMIVIAIFPLVVLLAQPLSSISYWWPILLIGIGTSAHQAWSANLFTTVSDMFPKKVVASVTGIGGMAGSISGVIISKVGGWLFDHYSTLGHIETGYTIMFAFCAIAYLLAWCIMKLLVPKFKPITDI
SIO_010081: H0I88_RS00500
subclass of: SO_0000673
so part of: H0I88_RS00500
location: complement(119220..120638)
location: region:119220-120638:-1
so has part: feature:119220-120638:-1:exon

WP_015423078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119220-120638:-1:exon

H0I88_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: uxaC
locus tag: H0I88_RS00505
old locus tag: TGRD_067
old locus tag: TGRD_RS00500
so part of: sequence
location: complement(120700..122106)
location: region:120700-122106:-1
so has part: feature:120700-122106:-1:exon
subclass of: SO_0000010

position:120700:-1
position: 120700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122106:-1
position: 122106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120700-122106:-1:exon

H0I88_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: uxaC
locus tag: H0I88_RS00505
old locus tag: TGRD_067
old locus tag: TGRD_RS00500
EC number: 5.3.1.12
inference: COORDINATES: protein motif:HMM:NF002794.0
GO function: GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO process: GO:0006064 - glucuronate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucuronate isomerase
translation: MKKFLDKDFLLSTEAAKELFHKYAEKKPILDYHCHINPEEIAKDRQFENISQLWLGSDHYKWRQMRSCGVEEKYITGNASDSEKFQKWAETLEKAIGNPLYHWSHLELRRYFGYEGVLNGETAKEVWTICNEKLREKSMSARSMIKQSSVTLICTTDDPVDNLEWHKKIKEEESFDVQVLPTWRPDRALNIEKPGFKDYIARFSEVSGVNITSFKTMKEAFRKRLGFFISSGCRTTDHAPEYIMYVPSSDKEVETIFDKRLSGVALSKEEELKYKTAFMLFAGGEYSKNDLVMELHYGCKRNNNTLVFDKLGPDTGHDCIDNFAPGAQLSNFLDALDSAGQLPRTIIYSLNPNDNAVIGTILGCFQDSSALSKIQQGAAWWFNDHKPGITEQLTSLANLGILSNFVGMLTDSRSFLSYTRHEYFRRILCDLIGSWVENGEYPYDVKILSKIVSDISYDNAVRYFKFKL
SIO_010081: H0I88_RS00505
subclass of: SO_0000673
so part of: H0I88_RS00505
location: complement(120700..122106)
location: region:120700-122106:-1
so has part: feature:120700-122106:-1:exon

WP_015423079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120700-122106:-1:exon

H0I88_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00510
old locus tag: TGRD_068
old locus tag: TGRD_RS00505
so part of: sequence
location: complement(122128..122961)
location: region:122128-122961:-1
so has part: feature:122128-122961:-1:exon
subclass of: SO_0000010

position:122128:-1
position: 122128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122961:-1
position: 122961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122128-122961:-1:exon

H0I88_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00510
old locus tag: TGRD_068
old locus tag: TGRD_RS00505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002938050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MEWNKKVAVITGAGGVLLSAYAKELASKGVKTAVLSRNLKNAQCTAEEITSTGGIAKAYACDVLDKENLIKTEEQIYKDFGQYHILINGAGGNMPNANTTNEIFNPKDLNNPNVCSFFDLDSKEIEKVFSLNFMGTFLVSQIFTKRMLGTKGAVIINFSSMAAQSPMTKVLGYAAAKAAIDNFTKWLAVHFAEQGLRVNAVAPGFFLTNQNKSLLTNTDGSLTSRSHKIITHTPMRRFGEARDLFGALSWLCDEEASGFVTGSIIAVDGGFQAYSGV
SIO_010081: H0I88_RS00510
subclass of: SO_0000673
so part of: H0I88_RS00510
location: complement(122128..122961)
location: region:122128-122961:-1
so has part: feature:122128-122961:-1:exon

WP_015423080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122128-122961:-1:exon

H0I88_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: uxuA
locus tag: H0I88_RS00515
old locus tag: TGRD_069
old locus tag: TGRD_RS00510
so part of: sequence
location: complement(122948..124042)
location: region:122948-124042:-1
so has part: feature:122948-124042:-1:exon
subclass of: SO_0000010

position:122948:-1
position: 122948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124042:-1
position: 124042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122948-124042:-1:exon

H0I88_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: uxuA
locus tag: H0I88_RS00515
old locus tag: TGRD_069
old locus tag: TGRD_RS00510
EC number: 4.2.1.8
inference: COORDINATES: protein motif:HMM:TIGR00695.1
GO function: GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO process: GO:0006064 - glucuronate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannonate dehydratase
translation: MKMTFRWYGENVDPIPLRYIRQIPGVEGIVWALHDIPAGECWTVERIEEVKAQAAKYNFNTDVVESVNVHEDIKLGLPSRKKYIENYKNTLKNLGRAGVKVVCYNFMPVFDWTRTDLYKPQSDGSTALFYEKAKVDNINPVKFLEQMSKQEGLLTMPGWEPERLSKIKELFEAYKEIKDDDLWENLKYFLQEIIPVAQESGIKMAIHPDDPPWSIFGLSRIITCRDNIKKFLSLVDNPSNGLTLCSGSLGSCTKNNIAAIVREFGDRIYFAHIRNIRHFKNGDFTETSHKTSDGSLDITEIVKAYHDINYKYYVRPDHGRHIWDEKCRPGYGLYDRSLGIMYIFGLWDAFEKISASKRGQYGVE
SIO_010081: H0I88_RS00515
subclass of: SO_0000673
so part of: H0I88_RS00515
location: complement(122948..124042)
location: region:122948-124042:-1
so has part: feature:122948-124042:-1:exon

WP_015423081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122948-124042:-1:exon

H0I88_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00520
old locus tag: TGRD_070
old locus tag: TGRD_RS00515
so part of: sequence
location: complement(124050..125075)
location: region:124050-125075:-1
so has part: feature:124050-125075:-1:exon
subclass of: SO_0000010

position:124050:-1
position: 124050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125075:-1
position: 125075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124050-125075:-1:exon

H0I88_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00520
old locus tag: TGRD_070
old locus tag: TGRD_RS00515
inference: COORDINATES: protein motif:HMM:NF012515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar kinase
translation: MSKKIVIFGELMLRLAPEGYYRFSQANRYGATYGGGEANVAVSLANFGLKAAFISKMPKHEIGQAGINSLRKYGVDTSFIARGGDRVGIYFLEKGASQRPSKVIYDRAGSSISAASKEDFDWDKIFEDVQWFHFTGITPALGDNVAEICLEACKYAKEKKITVSCDLNYRNKLWSKEKAGRIMGELCKYVNVCIANEEDAGDVFGIKAKHTDITTGKINHEGYKEVAQELKTRFNFSKVAITLRSSISASDNRWAAMLYDGKEFFFSREYLIHIIDRVGGGDSFGAGLIYSSINDYAGQKTIEFAVAASCLKHSIEGDYNQVSVDEVKKLAGGNASGRVER
SIO_010081: H0I88_RS00520
subclass of: SO_0000673
so part of: H0I88_RS00520
location: complement(124050..125075)
location: region:124050-125075:-1
so has part: feature:124050-125075:-1:exon

WP_015423082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124050-125075:-1:exon

H0I88_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00525
old locus tag: TGRD_071
old locus tag: TGRD_RS00520
so part of: sequence
location: complement(125094..126059)
location: region:125094-126059:-1
so has part: feature:125094-126059:-1:exon
subclass of: SO_0000010

position:125094:-1
position: 125094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126059:-1
position: 126059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125094-126059:-1:exon

H0I88_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00525
old locus tag: TGRD_071
old locus tag: TGRD_RS00520
EC number: 4.1.2.14
EC number: 4.1.3.16
inference: COORDINATES: protein motif:HMM:NF004325.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MNKLLNEISNIGIVPVVVLDESSHALSLAKALYAGGLGCAEVTFRTAAAEESIKIISKKMPEMLVGAGTVLTVEQVDRAIAAGAKFIVSPGLNREIVKYCVDKNITIIPGCTTPSDIETALSLGLEVVKFFPAEAAGGINMIKAISAPYTSIKFMPTGGINIKNLNTYLSFNKVIACGGSWMVSKELLKSNNYEAVTKLAKEALCAMLGFEVQHVGINMPDAAGANKAASAFESLFGFTKHERSGSFFAGSDIEIMKQQFLGKNGHIAVSTNNAARAVYYLRRAGVVFNEGTASYDEAGNLRIIYIKEEIGNFAVHLLQKK
SIO_010081: H0I88_RS00525
subclass of: SO_0000673
so part of: H0I88_RS00525
location: complement(125094..126059)
location: region:125094-126059:-1
so has part: feature:125094-126059:-1:exon

WP_015423083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125094-126059:-1:exon

H0I88_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00530
old locus tag: TGRD_RS00525
old locus tag: TGRD_tRNA06
so part of: sequence
location: 126339..126410
location: region:126339-126410:1
so has part: feature:126339-126410:1:exon
subclass of: SO_0000663

position:126339:1
position: 126339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126410:1
position: 126410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126339-126410:1:exon

H0I88_RS00530
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00530
old locus tag: TGRD_RS00525
old locus tag: TGRD_tRNA06
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:126372..126374,aa:Arg,seq:ccg)
SIO_010081: H0I88_RS00530
subclass of: SO_0000673
so part of: H0I88_RS00530
location: 126339..126410
location: region:126339-126410:1
so has part: feature:126339-126410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126339-126410:1:exon

H0I88_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00535
old locus tag: TGRD_RS00530
so part of: sequence
location: 126987..127310
location: region:126987-127310:1
so has part: feature:126987-127310:1:exon
subclass of: SO_0000010

position:126987:1
position: 126987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127310:1
position: 127310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126987-127310:1:exon

H0I88_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00535
old locus tag: TGRD_RS00530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIIYNCSGYEDMETLELLEGTVDIYIPDVKYSDDEIAFKYSGVKDYVEVNRVALKEMKRQVGDLTVDSEGAAQKGFIVRHLVLPGNVENTKKALEFIAKNYQKILL
SIO_010081: H0I88_RS00535
subclass of: SO_0000673
so part of: H0I88_RS00535
location: 126987..127310
location: region:126987-127310:1
so has part: feature:126987-127310:1:exon

WP_125266972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126987-127310:1:exon

H0I88_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00540
old locus tag: TGRD_RS00535
so part of: sequence
location: 127538..127831
location: region:127538-127831:1
so has part: feature:127538-127831:1:exon
subclass of: SO_0000010

position:127538:1
position: 127538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127831:1
position: 127831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127538-127831:1:exon

H0I88_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00540
old locus tag: TGRD_RS00535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKINCSNSELNLITLHNLSVGVGERVVATASQTMPEIKKQREKTREFRIEISKGVDNCGNKMFYHLVYREKKKEREYIITSKAILFVLIANFLHYS
SIO_010081: H0I88_RS00540
subclass of: SO_0000673
so part of: H0I88_RS00540
location: 127538..127831
location: region:127538-127831:1
so has part: feature:127538-127831:1:exon

WP_095558658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127538-127831:1:exon

H0I88_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00545
old locus tag: TGRD_16SrRNA01
old locus tag: TGRD_RS00540
so part of: sequence
location: 128272..129792
location: region:128272-129792:1
so has part: feature:128272-129792:1:exon
subclass of: SO_0000573

position:128272:1
position: 128272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129792:1
position: 129792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128272-129792:1:exon

H0I88_RS00545
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1408204
locus tag: H0I88_RS00545
old locus tag: TGRD_16SrRNA01
old locus tag: TGRD_RS00540
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: H0I88_RS00545
subclass of: SO_0000673
so part of: H0I88_RS00545
location: 128272..129792
location: region:128272-129792:1
so has part: feature:128272-129792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128272-129792:1:exon

H0I88_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00550
old locus tag: TGRD_RS00545
old locus tag: TGRD_tRNA07
so part of: sequence
location: 129959..130032
location: region:129959-130032:1
so has part: feature:129959-130032:1:exon
subclass of: SO_0000663

position:129959:1
position: 129959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130032:1
position: 130032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129959-130032:1:exon

H0I88_RS00550
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00550
old locus tag: TGRD_RS00545
old locus tag: TGRD_tRNA07
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:129993..129995,aa:Ile,seq:gat)
SIO_010081: H0I88_RS00550
subclass of: SO_0000673
so part of: H0I88_RS00550
location: 129959..130032
location: region:129959-130032:1
so has part: feature:129959-130032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129959-130032:1:exon

H0I88_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00555
old locus tag: TGRD_RS00550
old locus tag: TGRD_tRNA08
so part of: sequence
location: 130090..130162
location: region:130090-130162:1
so has part: feature:130090-130162:1:exon
subclass of: SO_0000663

position:130090:1
position: 130090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130162:1
position: 130162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130090-130162:1:exon

H0I88_RS00555
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00555
old locus tag: TGRD_RS00550
old locus tag: TGRD_tRNA08
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:130123..130125,aa:Ala,seq:tgc)
SIO_010081: H0I88_RS00555
subclass of: SO_0000673
so part of: H0I88_RS00555
location: 130090..130162
location: region:130090-130162:1
so has part: feature:130090-130162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130090-130162:1:exon

H0I88_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00560
old locus tag: TGRD_23SrRNA01
old locus tag: TGRD_RS00555
so part of: sequence
location: 130487..133369
location: region:130487-133369:1
so has part: feature:130487-133369:1:exon
subclass of: SO_0000573

position:130487:1
position: 130487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133369:1
position: 133369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130487-133369:1:exon

H0I88_RS00560
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1408204
locus tag: H0I88_RS00560
old locus tag: TGRD_23SrRNA01
old locus tag: TGRD_RS00555
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: H0I88_RS00560
subclass of: SO_0000673
so part of: H0I88_RS00560
location: 130487..133369
location: region:130487-133369:1
so has part: feature:130487-133369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130487-133369:1:exon

H0I88_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rrf
locus tag: H0I88_RS00565
old locus tag: TGRD_5SrRNA01
old locus tag: TGRD_RS00560
so part of: sequence
location: 133618..133734
location: region:133618-133734:1
so has part: feature:133618-133734:1:exon
subclass of: SO_0000573

position:133618:1
position: 133618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133734:1
position: 133734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133618-133734:1:exon

H0I88_RS00565
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1408204
gene: rrf
locus tag: H0I88_RS00565
old locus tag: TGRD_5SrRNA01
old locus tag: TGRD_RS00560
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: H0I88_RS00565
subclass of: SO_0000673
so part of: H0I88_RS00565
location: 133618..133734
location: region:133618-133734:1
so has part: feature:133618-133734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133618-133734:1:exon

H0I88_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplJ
locus tag: H0I88_RS00570
old locus tag: TGRD_072
old locus tag: TGRD_RS00565
so part of: sequence
location: 134011..134526
location: region:134011-134526:1
so has part: feature:134011-134526:1:exon
subclass of: SO_0000010

position:134011:1
position: 134011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134526:1
position: 134526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134011-134526:1:exon

H0I88_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplJ
locus tag: H0I88_RS00570
old locus tag: TGRD_072
old locus tag: TGRD_RS00565
inference: COORDINATES: protein motif:HMM:NF000955.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MPNVKNQEIVKSLTEKFKDMEGLILTEYRGLTVEEISDLRLKLRPFGSEYVVVKNTLSKIAFNGTGIEACENFSGSTALVIESGDIVSPAKVVVEFAKTHAKLKIKSGFLEGKFVNVAVIEQLSALPSKEVLIARMLGSMNATVTGFVNVLAANIRGLVTVLDAVAKKQAV
SIO_010081: H0I88_RS00570
subclass of: SO_0000673
so part of: H0I88_RS00570
location: 134011..134526
location: region:134011-134526:1
so has part: feature:134011-134526:1:exon

WP_015423084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134011-134526:1:exon

H0I88_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplL
locus tag: H0I88_RS00575
old locus tag: TGRD_073
old locus tag: TGRD_RS00570
so part of: sequence
location: 134853..135230
location: region:134853-135230:1
so has part: feature:134853-135230:1:exon
subclass of: SO_0000010

position:134853:1
position: 134853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135230:1
position: 135230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134853-135230:1:exon

H0I88_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplL
locus tag: H0I88_RS00575
old locus tag: TGRD_073
old locus tag: TGRD_RS00570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MAGLSKDQLIESISSMSVIELSELVKALEEKFGVSAAAPAPAVVAGTSPAVATEEKTEFNVILGSVGTSKINVIKVVREVTGLGLKEAKDLVDGAPKTVKENVAKAEAEEIKKKFTEVGATVELK
SIO_010081: H0I88_RS00575
subclass of: SO_0000673
so part of: H0I88_RS00575
location: 134853..135230
location: region:134853-135230:1
so has part: feature:134853-135230:1:exon

WP_015423085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134853-135230:1:exon

H0I88_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpoB
locus tag: H0I88_RS00580
old locus tag: TGRD_074
old locus tag: TGRD_RS00575
so part of: sequence
location: 135342..139115
location: region:135342-139115:1
so has part: feature:135342-139115:1:exon
subclass of: SO_0000010

position:135342:1
position: 135342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139115:1
position: 139115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135342-139115:1:exon

H0I88_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpoB
locus tag: H0I88_RS00580
old locus tag: TGRD_074
old locus tag: TGRD_RS00575
EC number: 2.7.7.6
inference: COORDINATES: protein motif:HMM:NF001616.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MNKVNFGRIRIPIDPPSLLKMQKDSFSEFLQQNVAPEKRKLQGLESAFRDIFPLTNSDGNLVLEYVSYAFGEPKYSVEESITRDATYALPLKVKLRLIYKKEDDIEKELSEQEVYFGDIPLMTDTATFIINGAERVVVSQIHRSPGVIFEEDEEKRVTVLGKPLYFARMIPYRGAWVEFEFDQNGILYVRIDRKRKIFVTTFLRSLGFRTDEEILNLFKEVKEVSLDAALTSLTGEYIAEDISDENTGEIIADTGRELQEDLIKKLWAKGFTKVTVFKDVSILLTLKKDTIKNQKEAINYIYKVLKTQEFVVQERAQVFLEELLFKSVRRYDLTKIGRYKILKKLAPIFKYYEKNFNLNIPPETKRTLTKEDVVVTLKYLLMLYSGETEFTENGQTTKIVLDDIDHLGNRRVRSVGELLENQIRIGLVQMARTVKEHMNNQDKFNVTPRSLINITQFIAQIRKFFGTSQLSQFMDQINPLAELTHKRRLSALGPGGLNRKRAGFEVRDVHHTHYGRVCPIETPEGPNIGLITSLSAFASVNPYGLIETPYKKVKNGRATDKIEYLTADKEDEFFVAQANTPLDDKGNILSDLVQGRKWDDFLFQSPAKVDYMDVSPMQVISISAALIPFLEHDDANRALMGCNMQRQAVPLLLAEVPLVSTGIEKKVAEDSGVVVVSDSDGEVVSVSSDEIMIYSQSKKIEVYELKKYLRSNQDTCINQKPLITLGDIVKKGQIIADGPATSDGQLSLGQNILVAYMPWDGYNFEDAMLLSEKLIQDDKFTSIHIREFKTEARETKEHPEEITKDIPNVGAEDLLDLDEYGIVKVGSMVQRGDILVGKTAPKGEQQMTPEERLLRVLFGKKAEDVQDVSLRVPPGISGKVIGVRVFIRLEKITDQEKKKKQKEMYSVYEAAKAKLCKDKKEQLEIAKKSETAKIEAIYATKEEILRQNYESEKEKLKKGDDLPVSVNKTVKVYIAAKLKVQVGDKLAGRHGNKGVVARILPVEDMPHLPDGTPVDCVLSPLAIPSRMNVGQLLEIMLGWSGKELGVQMITPVFDGASEEQIKDYVEKAKAKILDKKKKLLIAHGLEGVELEESLSKFADESLPTSDCKIKLYDGRTGEPFMEKVTIGVMYVMKLNHLVEDKMHARSTGPYSLITRQPLGGKAQFGGQRFGEMEVWAIEGYGAAHILQEFLTVKSDDVEGRVKMYDSIIKGESISKPGVPESFKVLVSELKSLALNVELFNGKRQKDNHEKMKGVDKK
SIO_010081: H0I88_RS00580
subclass of: SO_0000673
so part of: H0I88_RS00580
location: 135342..139115
location: region:135342-139115:1
so has part: feature:135342-139115:1:exon

WP_015423086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135342-139115:1:exon

H0I88_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpoC
locus tag: H0I88_RS00585
old locus tag: TGRD_075
old locus tag: TGRD_RS00580
so part of: sequence
location: 139115..143896
location: region:139115-143896:1
so has part: feature:139115-143896:1:exon
subclass of: SO_0000010

position:143896:1
position: 143896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139115-143896:1:exon

H0I88_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpoC
locus tag: H0I88_RS00585
old locus tag: TGRD_075
old locus tag: TGRD_RS00580
EC number: 2.7.7.6
inference: COORDINATES: protein motif:HMM:TIGR02386.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MVKINFQIKKKKSNGPNFIGFDAVRVSVASPDQIKTWSYGEVKKPETINYRTFKPERDGLFCNRIFGPTKDWECHCGKYKYIKYKGTICDRCGVEVTESKVRRERFGHINLAVPVAHLWFLKKPPSRVGILLNMKISDLEKVIYYAKYIVMGDLKDRSGISFFARKGMLMGGEDFNLFKYGINNPIVKEEFKNIFDGIVCEEIKLDSNLTKALKQLKVLVKGQADSAGISTEEAAKKILENVKKGDIYYKVYFKPHSVYYYIDLDPSSHGEIKKILSEKFEKSSTVSITETDKKIRIEFFDIEKDKIYNDLRKDSFALKKYEGCLRIEILKNKIPFIENFSRSDSFVLLEESDINNIQNGFGDSLKVNIGAEAVRSLLEEINLDDEMKNIYAEIKKTKSDAERARLLRKLRVVEGFLNSQTRPEWMILTVLPVIPPDLRPLVALDGGRFATSDLNDLYRRIINRNNRLRHIEQLKAPIVMINNEKRLLQEAVDALIDNDSRMRPVTGAGNRILKSLSDTLKGKRGRFRQNLLGKRVDYSGRSVIVVGPNLRLNQCGIPKEMALELFKPFIVKELIKQENITLRSAKRMLERGDLKVWNILEKVTQSHPVLLNRAPTLHRLGIQAFEPVLVEGKSIQLHPLTCSAFNADFDGDQMAVHLPISLEAQLEARVLMMATRNILSPASGRPIAVPSQDMVLGNCYLTKEKYGVVGEGKVFSSVSEAISAYQAEKVDLQARIKVAGITSIRDKNLNNDDEQPDVTKWKNCKSEDDTEIINYTTVGRIIFNEQLPKNDDGSYALEYQNKSMTKKELVALVDRCYKELGQFKTTVLLDEIKRIGYKYATLAGISISIDEMKVPTEKEKMVREAKTKISEIEKQAKLGLITESERYNRIIDIWTRVTDEISDIMFDEMRKEETKAYKPGQNRFNSIFMMADSGSRGSRQQVRQLAGMRGLMAKPQKKLTGGIGEIIETPIISNFREGLTVLEYFISTHGGRKGLADTALKTAEAGYLTRRLVDVAHDVVVREEDCGTVNGVFIGTLRCGDEIIEKIDERVVGRTALDNVVDIVHDDLIIKRGELITPKKAEKLVEAGIDKIGIRSVLTCESGHGVCAKCYGVNPATGEQVEMGEAVGILAAQSIGEPGTQLTLRTFHIGGAASRVVQRSEVYAENNGTVNYYNLKTIQNKDGETIVLSRNAELVYTEYPVYRKQIYQIPYGAVIKIYDGQTVEIRVNPITGMKKDILIAKWDPHSKPIISEFDGTVNFVDVKDGVTLQREKSKITGQIERVIIEHSSDRRSPRIVVKKDDGSVVEYPLPVDTTLVVRDKDRVKSGDILAKIPQEISRTKDITGGLPRVAELFEGRRPRNVAVVSEIDGIVHLVGPTVKGNVKVEVENPETKMKKSYLVRAGRHLVVYEGDRVKEGEALSDGAINPHDILKVKGPKEVQEYLVNEIQQVYRLQGVSINDKHIEIIVRQMLSNVRITDSGDSHYLNGEIVSRYKYEIDRKAIKGKKGKAPIAHSILLGITKASLSSDSFISAASFQETTRILTEAAVSGQVDYLKGLKENVSIGRLIPAGTGLAAVDIDDNNKFYSREQNDAND
SIO_010081: H0I88_RS00585
subclass of: SO_0000673
so part of: H0I88_RS00585
location: 139115..143896
location: region:139115-143896:1
so has part: feature:139115-143896:1:exon

WP_015423087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139115-143896:1:exon

H0I88_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsL
locus tag: H0I88_RS00590
old locus tag: TGRD_076
old locus tag: TGRD_RS00585
so part of: sequence
location: 143883..144278
location: region:143883-144278:1
so has part: feature:143883-144278:1:exon
subclass of: SO_0000010

position:143883:1
position: 143883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144278:1
position: 144278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143883-144278:1:exon

H0I88_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsL
locus tag: H0I88_RS00590
old locus tag: TGRD_076
old locus tag: TGRD_RS00585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293564.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MPTINQLITNGRKGIIKKTKSPALKNCPQRRGVCTRVYTVTPRKPNSALRKVARVRLTSGYEISSYIPGEGHNLQEHSLVLIRGGRIRDLPGVRYHIIRGTLDTAGVDGRKQGRSKYGAKKAKVAKTASAK
SIO_010081: H0I88_RS00590
subclass of: SO_0000673
so part of: H0I88_RS00590
location: 143883..144278
location: region:143883-144278:1
so has part: feature:143883-144278:1:exon

WP_015423088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143883-144278:1:exon

H0I88_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsG
locus tag: H0I88_RS00595
old locus tag: TGRD_078
old locus tag: TGRD_RS00590
so part of: sequence
location: 144621..145100
location: region:144621-145100:1
so has part: feature:144621-145100:1:exon
subclass of: SO_0000010

position:144621:1
position: 144621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145100:1
position: 145100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144621-145100:1:exon

H0I88_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsG
locus tag: H0I88_RS00595
old locus tag: TGRD_078
old locus tag: TGRD_RS00590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRKALKPKEKRGLPEPDSKFGSVQIARFISKLNFEGKKSIAESIMYGSFDIIKERTGEDPVSVFNRALENIRPLLEVRPRRVGGATYQVPMEVPVIRSTTLAINWLIGIARSKTGKPMREKLAQEIIDASKKEGAAVKKREDTHKMAEANKAFAHYRW
SIO_010081: H0I88_RS00595
subclass of: SO_0000673
so part of: H0I88_RS00595
location: 144621..145100
location: region:144621-145100:1
so has part: feature:144621-145100:1:exon

WP_015423090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144621-145100:1:exon

H0I88_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: fusA
locus tag: H0I88_RS00600
old locus tag: TGRD_079
old locus tag: TGRD_RS00595
so part of: sequence
location: 145467..147548
location: region:145467-147548:1
so has part: feature:145467-147548:1:exon
subclass of: SO_0000010

position:145467:1
position: 145467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147548:1
position: 147548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145467-147548:1:exon

H0I88_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: fusA
locus tag: H0I88_RS00600
old locus tag: TGRD_079
old locus tag: TGRD_RS00595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002508564.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MAREYPLNKVRNFGIAAHIDAGKTTTTERILYYTGRTHKIGEVHEGAATMDWMEQEKERGITITSAATYCRWQDMQFNIIDTPGHVDFTAEVERSLRVLDGAVVVFDSGNGVEPQSETVWRQADKYGVPRIVFSNKMDKVGADFFMVVNDIEEKLGAKPIPVQIPIGAESSFQGIVDLVTMKAHIWSGEELGAKFDITDVPKELEEKAHAARSEMIELIADYSDDIMNNFMEGKESTAVQIKQAIRNATLQIKLIPVLCGTAFKNKGVQPMLDAVCDYLPSPLDRKAFKGINPVTSETDSREVDDKAPFSALAFKIQADPYIGKLTYLRVYSGTLESGSYVYNPIKDAKERISRIVRMHSNNREEVKSVNTGDIAAAVGLKNTGTGDTLCDEEKPILLESMDFPVPVIDVAIEPKSKADEEKLGIALNRLSEEDPTFRVRTNEETNQTIIAGMGELHLEILVDRMKREFNVQANVGRPQVAYRETIRKVQEAESKYIRQTGGRGQYGHVVLTVEPQDPGKGYEFVNKIVGGVIPREYIPAIDKGIKEAMTSGTLAGYPVADVKVVVIDGSFHEVDSSEMAFKIAGSMAFKDACRKASPVILEPIMKTEVIVPEEYMGDVIGDLNSRRGKIVSMESKNKVQHIKANVPLAEMFGYSTTLRSLTQGRGNYSMEPSHYEEVPSQIADKILERTTRG
SIO_010081: H0I88_RS00600
subclass of: SO_0000673
so part of: H0I88_RS00600
location: 145467..147548
location: region:145467-147548:1
so has part: feature:145467-147548:1:exon

WP_015423091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145467-147548:1:exon

H0I88_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tuf
locus tag: H0I88_RS00605
old locus tag: TGRD_080
old locus tag: TGRD_RS00600
so part of: sequence
location: 147563..148762
location: region:147563-148762:1
so has part: feature:147563-148762:1:exon
subclass of: SO_0000010

position:147563:1
position: 147563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148762:1
position: 148762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147563-148762:1:exon

H0I88_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tuf
locus tag: H0I88_RS00605
old locus tag: TGRD_080
old locus tag: TGRD_RS00600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040566.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MGKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKVLGDKGLAKYISYDEVARASESQGRRDASKIVTIAVSHVEYSTVNRHYAHIDCPGHADYVKNMITGAAQMDGAILVVSALDGPMPQTREHILLARQVNVPAVVVFLNKCDAVEDKELLDLVEMEVRDLLTKYNFPGESTPIIRGSALGALEGKQDGVDSIMSLMEAVDNTIPLPARDVDKPFLMSVEDVFSITGRGTVATGRVEKGRVRVGENVDIVGIQETRKSVVTGIEMFRKLLDEAQAGDNIGMLLRGIEKNQVERGQVIAYPGSIKPHKKFRGQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGIAHLPEGVEMVIPGDNVTMDIELIMPVAMETQLRFAIREGGKTVGSGVVTEIVE
SIO_010081: H0I88_RS00605
subclass of: SO_0000673
so part of: H0I88_RS00605
location: 147563..148762
location: region:147563-148762:1
so has part: feature:147563-148762:1:exon

WP_015423092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147563-148762:1:exon

H0I88_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsJ
locus tag: H0I88_RS00610
old locus tag: TGRD_081
old locus tag: TGRD_RS00605
so part of: sequence
location: 148931..149257
location: region:148931-149257:1
so has part: feature:148931-149257:1:exon
subclass of: SO_0000010

position:148931:1
position: 148931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149257:1
position: 149257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148931-149257:1:exon

H0I88_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsJ
locus tag: H0I88_RS00610
old locus tag: TGRD_081
old locus tag: TGRD_RS00605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MVNEKTVPTQRLRIKLRSYDHKILDDSLAKIVETARRTGAAITGPVLLPTNIKKYTVNRSVHTDKKSREQFEMRIHKRLVDICEPSSKTVDELMKLDLPAGVDIEIKV
SIO_010081: H0I88_RS00610
subclass of: SO_0000673
so part of: H0I88_RS00610
location: 148931..149257
location: region:148931-149257:1
so has part: feature:148931-149257:1:exon

WP_015423093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148931-149257:1:exon

H0I88_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplC
locus tag: H0I88_RS00615
old locus tag: TGRD_082
old locus tag: TGRD_RS00610
so part of: sequence
location: 149290..149973
location: region:149290-149973:1
so has part: feature:149290-149973:1:exon
subclass of: SO_0000010

position:149290:1
position: 149290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149973:1
position: 149973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149290-149973:1:exon

H0I88_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplC
locus tag: H0I88_RS00615
old locus tag: TGRD_082
old locus tag: TGRD_RS00610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293507.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MLKFIIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKGLNKAQAVFFKRNNLSYKRTLKEFRVSEVAGFSVGHEIKADAFKAGDYVDVSAVTKGKGYAGVIKRHNFGMQPVSHGQSDRTRSRGSSGAQGPQKVLKGLKMSGHMGNEYVTVQKLLIVNVDAEKNVLLIKGSVPSANRGTLFISSTLKKIPKVLVAVVHKGTKVKKK
SIO_010081: H0I88_RS00615
subclass of: SO_0000673
so part of: H0I88_RS00615
location: 149290..149973
location: region:149290-149973:1
so has part: feature:149290-149973:1:exon

WP_015423094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149290-149973:1:exon

H0I88_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplD
locus tag: H0I88_RS00620
old locus tag: TGRD_083
old locus tag: TGRD_RS00615
so part of: sequence
location: 150375..150995
location: region:150375-150995:1
so has part: feature:150375-150995:1:exon
subclass of: SO_0000010

position:150375:1
position: 150375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150995:1
position: 150995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150375-150995:1:exon

H0I88_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplD
locus tag: H0I88_RS00620
old locus tag: TGRD_083
old locus tag: TGRD_RS00615
inference: COORDINATES: protein motif:HMM:NF012782.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: METTVYDAKGEEKGKIELPDFFGKKVSVALLHEVTMAYLNNLRAGTHKTKTRGEVSFSGAKPWKQKGTGNARAGQKNSPLWRKGGIIFGPQPRNYYTKISKRKKKLSLDMAFSAQLKNGNIIVVDSVKVSEVKTKKVAELIKNLKVGGKKIVFAIPSDTDFKVAARNIKNVIVENIKNINAYQVLWADKLVITPEAVDLIKERQSA
SIO_010081: H0I88_RS00620
subclass of: SO_0000673
so part of: H0I88_RS00620
location: 150375..150995
location: region:150375-150995:1
so has part: feature:150375-150995:1:exon

WP_015423095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150375-150995:1:exon

H0I88_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplW
locus tag: H0I88_RS00625
old locus tag: TGRD_084
old locus tag: TGRD_RS00620
so part of: sequence
location: 151034..151324
location: region:151034-151324:1
so has part: feature:151034-151324:1:exon
subclass of: SO_0000010

position:151034:1
position: 151034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151324:1
position: 151324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151034-151324:1:exon

H0I88_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplW
locus tag: H0I88_RS00625
old locus tag: TGRD_084
old locus tag: TGRD_RS00620
inference: COORDINATES: protein motif:HMM:NF004359.0
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MDIRNIIKRPIVTEKAVLMKEKSNKYTFVVDKSANKFQIKYAVETLFNVKVKSVHTSNCVGKSLKVGRYAAGYRSDWKKAIVKLGKGQEIQLADKV
SIO_010081: H0I88_RS00625
subclass of: SO_0000673
so part of: H0I88_RS00625
location: 151034..151324
location: region:151034-151324:1
so has part: feature:151034-151324:1:exon

WP_015423096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151034-151324:1:exon

H0I88_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplB
locus tag: H0I88_RS00630
old locus tag: TGRD_085
old locus tag: TGRD_RS00625
so part of: sequence
location: 151529..152356
location: region:151529-152356:1
so has part: feature:151529-152356:1:exon
subclass of: SO_0000010

position:151529:1
position: 151529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152356:1
position: 152356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151529-152356:1:exon

H0I88_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplB
locus tag: H0I88_RS00630
old locus tag: TGRD_085
old locus tag: TGRD_RS00625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MPIKTFKPYTQSRRHMSVSSFSNITKTSPEKSLTKIIKKKGGRNNTGQIMVRFRGGGHKRFYRIIDFKRDKFNIPAEVMSIEYDPNRSSSIALLQYLDGEKRYILYPLGVNVGDLLVSGPDAGIKPGNSLPISNIPVGTFVHNLELVEGKGGQFVRSAGVAAQILAKEGDYAHVRMPSGEIRLIRVKCYATIGQVGNLDHENITLGSAGRNRHMGRKPHVRGTAMNAVDHPHGGGRGRSKGNNQPRSPWNQPAKGFKTRPKKIWDWVIISRRNKS
SIO_010081: H0I88_RS00630
subclass of: SO_0000673
so part of: H0I88_RS00630
location: 151529..152356
location: region:151529-152356:1
so has part: feature:151529-152356:1:exon

WP_015423097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151529-152356:1:exon

H0I88_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsS
locus tag: H0I88_RS00635
old locus tag: TGRD_086
old locus tag: TGRD_RS00630
so part of: sequence
location: 152384..152668
location: region:152384-152668:1
so has part: feature:152384-152668:1:exon
subclass of: SO_0000010

position:152384:1
position: 152384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152668:1
position: 152668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152384-152668:1:exon

H0I88_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsS
locus tag: H0I88_RS00635
old locus tag: TGRD_086
old locus tag: TGRD_RS00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MSRSTKKGPYVDEKLFEKMQKLNKTGDRKVVKTWARASVITPEFVGHTIAIHNGKKFFPIFISEQMVGHKLGEFAPTRTFKGHGGMTKQETSLV
SIO_010081: H0I88_RS00635
subclass of: SO_0000673
so part of: H0I88_RS00635
location: 152384..152668
location: region:152384-152668:1
so has part: feature:152384-152668:1:exon

WP_015423098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152384-152668:1:exon

H0I88_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplV
locus tag: H0I88_RS00640
old locus tag: TGRD_087
old locus tag: TGRD_RS00635
so part of: sequence
location: 152778..153125
location: region:152778-153125:1
so has part: feature:152778-153125:1:exon
subclass of: SO_0000010

position:152778:1
position: 152778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153125:1
position: 153125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152778-153125:1:exon

H0I88_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplV
locus tag: H0I88_RS00640
old locus tag: TGRD_087
old locus tag: TGRD_RS00635
inference: COORDINATES: protein motif:HMM:NF012462.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEAKATAKFVRYTPRKVNQVLALIRNKKVEKTLEILSFLPKSTAVLVKKVLKSATANAGKFEDYSGLKVKEAWVGNGPILKRIRAGSKGRSMPIKKRTVHLTIIVTDASTYLRKK
SIO_010081: H0I88_RS00640
subclass of: SO_0000673
so part of: H0I88_RS00640
location: 152778..153125
location: region:152778-153125:1
so has part: feature:152778-153125:1:exon

WP_015423099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152778-153125:1:exon

H0I88_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsC
locus tag: H0I88_RS00645
old locus tag: TGRD_088
old locus tag: TGRD_RS00640
so part of: sequence
location: 153204..153899
location: region:153204-153899:1
so has part: feature:153204-153899:1:exon
subclass of: SO_0000010

position:153204:1
position: 153204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153899:1
position: 153899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153204-153899:1:exon

H0I88_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsC
locus tag: H0I88_RS00645
old locus tag: TGRD_088
old locus tag: TGRD_RS00640
inference: COORDINATES: protein motif:HMM:TIGR01009.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGHKIHPKSIRLGYIKDWESKWFNLKEMPNFIEEDYRIRVYLKNRLKLASVSKIVIERPGKYLRVSIYTARPGIVIGKGGQGIESLRKEIETMTAKKTFVNIMEIKRPEIDAQLASENIAFQLEKQIAFRRVMKRTIEKAMMSGVQGIKVMVSGRLGGAEIARTEWLKEGRIPLQTFRADIDYGFSEACTPMGHIGVKVWIFKKEFFKKTAKELAEDAKVVVDLDTAAKQG
SIO_010081: H0I88_RS00645
subclass of: SO_0000673
so part of: H0I88_RS00645
location: 153204..153899
location: region:153204-153899:1
so has part: feature:153204-153899:1:exon

WP_015423100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153204-153899:1:exon

H0I88_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplP
locus tag: H0I88_RS00650
old locus tag: TGRD_089
old locus tag: TGRD_RS00645
so part of: sequence
location: 153976..154389
location: region:153976-154389:1
so has part: feature:153976-154389:1:exon
subclass of: SO_0000010

position:153976:1
position: 153976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154389:1
position: 154389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153976-154389:1:exon

H0I88_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplP
locus tag: H0I88_RS00650
old locus tag: TGRD_089
old locus tag: TGRD_RS00645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLMPKRVKYRKMHRGRMKGKAKGGVSLAFGKYGLQALEPVWINSNQIEAARIALARSIKKGGKVWIRIFPDKPVTKKPAETRMGKGKGDPQFWVAVVKPGRVMFEMEGIPETEAKKALRLASNKLPIHTKILVRADI
SIO_010081: H0I88_RS00650
subclass of: SO_0000673
so part of: H0I88_RS00650
location: 153976..154389
location: region:153976-154389:1
so has part: feature:153976-154389:1:exon

WP_015423101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153976-154389:1:exon

H0I88_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmC
locus tag: H0I88_RS00655
old locus tag: TGRD_090
old locus tag: TGRD_RS00650
so part of: sequence
location: 154397..154600
location: region:154397-154600:1
so has part: feature:154397-154600:1:exon
subclass of: SO_0000010

position:154397:1
position: 154397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154600:1
position: 154600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154397-154600:1:exon

H0I88_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmC
locus tag: H0I88_RS00655
old locus tag: TGRD_090
old locus tag: TGRD_RS00650
inference: COORDINATES: protein motif:HMM:NF013027.2
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKSKNWNEMKNMSRVELNEKLSELQDKIFRLRFRHLTVPVKNPLEIREIRKDIARIKTLIAQKKKTK
SIO_010081: H0I88_RS00655
subclass of: SO_0000673
so part of: H0I88_RS00655
location: 154397..154600
location: region:154397-154600:1
so has part: feature:154397-154600:1:exon

WP_015423102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154397-154600:1:exon

H0I88_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsQ
locus tag: H0I88_RS00660
old locus tag: TGRD_091
old locus tag: TGRD_RS00655
so part of: sequence
location: 154636..154899
location: region:154636-154899:1
so has part: feature:154636-154899:1:exon
subclass of: SO_0000010

position:154636:1
position: 154636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154899:1
position: 154899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154636-154899:1:exon

H0I88_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsQ
locus tag: H0I88_RS00660
old locus tag: TGRD_091
old locus tag: TGRD_RS00655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MAERGKRKFRTGIVVSDKSNKTRQVSVERTYRHSLYDRVLRSKSKFIVHDEKNISHVGDTVKIMESRPLSKMKRWVLVEVVNKTSEI
SIO_010081: H0I88_RS00660
subclass of: SO_0000673
so part of: H0I88_RS00660
location: 154636..154899
location: region:154636-154899:1
so has part: feature:154636-154899:1:exon

WP_015423103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154636-154899:1:exon

H0I88_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplN
locus tag: H0I88_RS00665
old locus tag: TGRD_092
old locus tag: TGRD_RS00660
so part of: sequence
location: 154925..155293
location: region:154925-155293:1
so has part: feature:154925-155293:1:exon
subclass of: SO_0000010

position:154925:1
position: 154925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155293:1
position: 155293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154925-155293:1:exon

H0I88_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplN
locus tag: H0I88_RS00665
old locus tag: TGRD_092
old locus tag: TGRD_RS00660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQERTILNVADNSGARKIRCFRVTKGLKRRYASIGDVIHASVQDALPHANVKKGDVVKAVVVRTVKEIRRADGTYIKFDDNATVIINDEGEPKGTRIFGPVAKELRENNYLKIISLAPEVI
SIO_010081: H0I88_RS00665
subclass of: SO_0000673
so part of: H0I88_RS00665
location: 154925..155293
location: region:154925-155293:1
so has part: feature:154925-155293:1:exon

WP_015423104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154925-155293:1:exon

H0I88_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplX
locus tag: H0I88_RS00670
old locus tag: TGRD_093
old locus tag: TGRD_RS00665
so part of: sequence
location: 155499..155810
location: region:155499-155810:1
so has part: feature:155499-155810:1:exon
subclass of: SO_0000010

position:155499:1
position: 155499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155810:1
position: 155810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155499-155810:1:exon

H0I88_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplX
locus tag: H0I88_RS00670
old locus tag: TGRD_093
old locus tag: TGRD_RS00665
inference: COORDINATES: protein motif:HMM:TIGR01079.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MLNIKKKDKVLILSGKDRGKKGEVIYVSPDKGKVIVTKINVVKRHTNPTRKDLGGIHKKEAPIAISKIMLICPKCSRGSRAKFDKLSDGKKIRVCRRCGEVIV
SIO_010081: H0I88_RS00670
subclass of: SO_0000673
so part of: H0I88_RS00670
location: 155499..155810
location: region:155499-155810:1
so has part: feature:155499-155810:1:exon

WP_015423105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155499-155810:1:exon

H0I88_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplE
locus tag: H0I88_RS00675
old locus tag: TGRD_094
old locus tag: TGRD_RS00670
so part of: sequence
location: 155968..156531
location: region:155968-156531:1
so has part: feature:155968-156531:1:exon
subclass of: SO_0000010

position:155968:1
position: 155968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156531:1
position: 156531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155968-156531:1:exon

H0I88_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplE
locus tag: H0I88_RS00675
old locus tag: TGRD_094
old locus tag: TGRD_RS00670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005625881.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MNQPRLKEFYHKSVTAELKKQFSFKNVHQIPRLTKIVVNIGLGEAKENIKVLDIATEELAAITGQKPLICRAKKSLSNFKIRQGMPIGIKVTLRSAMMYEFLDRLINVAIPRIRDFRGIESSSFDGKGNFNLGLAEQYIFPEINVEKTDKARGMNVTIVTTAEKDDHAKVLLESFGMPFKKGLINNK
SIO_010081: H0I88_RS00675
subclass of: SO_0000673
so part of: H0I88_RS00675
location: 155968..156531
location: region:155968-156531:1
so has part: feature:155968-156531:1:exon

WP_015423106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155968-156531:1:exon

H0I88_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00680
old locus tag: TGRD_095
old locus tag: TGRD_RS00675
so part of: sequence
location: 156550..156735
location: region:156550-156735:1
so has part: feature:156550-156735:1:exon
subclass of: SO_0000010

position:156550:1
position: 156550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156735:1
position: 156735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156550-156735:1:exon

H0I88_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00680
old locus tag: TGRD_095
old locus tag: TGRD_RS00675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type Z 30S ribosomal protein S14
translation: MATTSAEAKMRKPQKFATRYRNRCRLCGRPRGYYRDFGICRICLRKLAYNGEIPGVTKSSW
SIO_010081: H0I88_RS00680
subclass of: SO_0000673
so part of: H0I88_RS00680
location: 156550..156735
location: region:156550-156735:1
so has part: feature:156550-156735:1:exon

WP_015423107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156550-156735:1:exon

H0I88_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsH
locus tag: H0I88_RS00685
old locus tag: TGRD_096
old locus tag: TGRD_RS00680
so part of: sequence
location: 156766..157167
location: region:156766-157167:1
so has part: feature:156766-157167:1:exon
subclass of: SO_0000010

position:156766:1
position: 156766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157167:1
position: 157167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156766-157167:1:exon

H0I88_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsH
locus tag: H0I88_RS00685
old locus tag: TGRD_096
old locus tag: TGRD_RS00680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016281716.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MIIDPISDMFTRIRNANLKLHEKVDVPSSKLKLGIAKILKEEGYISNYEIKGIENQTQSVLRIHLRYTSKGKVVLQGIKRISKSSLRIYKGHSDVPRTIGGLGVTIISTSKGLMTDGQARKDKIGGEVIGCVW
SIO_010081: H0I88_RS00685
subclass of: SO_0000673
so part of: H0I88_RS00685
location: 156766..157167
location: region:156766-157167:1
so has part: feature:156766-157167:1:exon

WP_015423108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156766-157167:1:exon

H0I88_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplF
locus tag: H0I88_RS00690
old locus tag: TGRD_097
old locus tag: TGRD_RS00685
so part of: sequence
location: 157269..157835
location: region:157269-157835:1
so has part: feature:157269-157835:1:exon
subclass of: SO_0000010

position:157269:1
position: 157269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157835:1
position: 157835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157269-157835:1:exon

H0I88_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplF
locus tag: H0I88_RS00690
old locus tag: TGRD_097
old locus tag: TGRD_RS00685
inference: COORDINATES: protein motif:HMM:TIGR03654.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRLGKKPVYMPEKVKAEFKKGILEVTGPGGKLSQVIDKKMNVKVDKSTILVEALGDSRRHNMLHGLTRGLVVNMVEGVTKGFKKELEIIGLGYKANVESGKNLIMAVGFSHLVTIPIPCTVKASVLLTPDKNTLITVTGIDKYEVGAFAARIRAVKPAEPYKGFGIKYSGENIIRKAGKAAAGAGKK
SIO_010081: H0I88_RS00690
subclass of: SO_0000673
so part of: H0I88_RS00690
location: 157269..157835
location: region:157269-157835:1
so has part: feature:157269-157835:1:exon

WP_015423109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157269-157835:1:exon

H0I88_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplR
locus tag: H0I88_RS00695
old locus tag: TGRD_098
old locus tag: TGRD_RS00690
so part of: sequence
location: 157844..158203
location: region:157844-158203:1
so has part: feature:157844-158203:1:exon
subclass of: SO_0000010

position:157844:1
position: 157844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158203:1
position: 158203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157844-158203:1:exon

H0I88_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplR
locus tag: H0I88_RS00695
old locus tag: TGRD_098
old locus tag: TGRD_RS00690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293491.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MKDSNKRFDYRVKRVRSKINGTHDKPRLSVYRGHKHIYAQIIDDSRGVTLASASTLSPELKGKLEINDTVEAAKSVGGLIAKKAVEKGVKKVVFDRRGYEYTGKIKALADTARESGLEF
SIO_010081: H0I88_RS00695
subclass of: SO_0000673
so part of: H0I88_RS00695
location: 157844..158203
location: region:157844-158203:1
so has part: feature:157844-158203:1:exon

WP_015423110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157844-158203:1:exon

H0I88_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsE
locus tag: H0I88_RS00700
old locus tag: TGRD_099
old locus tag: TGRD_RS00695
so part of: sequence
location: 158604..159086
location: region:158604-159086:1
so has part: feature:158604-159086:1:exon
subclass of: SO_0000010

position:158604:1
position: 158604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159086:1
position: 159086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158604-159086:1:exon

H0I88_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsE
locus tag: H0I88_RS00700
old locus tag: TGRD_099
old locus tag: TGRD_RS00695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018356922.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MQQQSDSSLKETVITVNRVAKVVKGGKRFSFNALVVVGNGSGKVGCGLGKANEVQSAIQKGSMYASKHMISVRLKGNTIPHEIIGVSGSGKVLLKPAAPGTGVIAGGMVRAVLEAVGIKDILTKSMRSSNPFNVVYATVEALKKLRSKEDVAKIRMKEVV
SIO_010081: H0I88_RS00700
subclass of: SO_0000673
so part of: H0I88_RS00700
location: 158604..159086
location: region:158604-159086:1
so has part: feature:158604-159086:1:exon

WP_095558971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158604-159086:1:exon

H0I88_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplO
locus tag: H0I88_RS00705
old locus tag: TGRD_100
old locus tag: TGRD_RS00700
so part of: sequence
location: 159086..159532
location: region:159086-159532:1
so has part: feature:159086-159532:1:exon
subclass of: SO_0000010

position:159532:1
position: 159532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159086-159532:1:exon

H0I88_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplO
locus tag: H0I88_RS00705
old locus tag: TGRD_100
old locus tag: TGRD_RS00700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016911111.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MGLNNLKPAKGSKHRKKIVGRGVGSGHGRTSTRGCKGQKSRSGDGSKKIGFEGGQTPIFRRIPKRGFRNNHFRGEYEIVNVDKLDKFEMGAEITPTSLKEAGFVAKTRLVKILGGGNVKKPFTVKVAAFSKSALDKIKAAGGKAEIVK
SIO_010081: H0I88_RS00705
subclass of: SO_0000673
so part of: H0I88_RS00705
location: 159086..159532
location: region:159086-159532:1
so has part: feature:159086-159532:1:exon

WP_095558972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159086-159532:1:exon

H0I88_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: secY
locus tag: H0I88_RS00710
old locus tag: TGRD_101
old locus tag: TGRD_RS00705
so part of: sequence
location: 159577..160923
location: region:159577-160923:1
so has part: feature:159577-160923:1:exon
subclass of: SO_0000010

position:159577:1
position: 159577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160923:1
position: 160923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159577-160923:1:exon

H0I88_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: secY
locus tag: H0I88_RS00710
old locus tag: TGRD_101
old locus tag: TGRD_RS00705
inference: COORDINATES: protein motif:HMM:TIGR00967.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MLNNFADIFKVPELRKKVLFTLFIIIAYRIGAMVPIPGINVEALKSFFATQNNGLLGFLDMFSGGALNRMSIFSMGIIPYINSSIIMSLLQGAHMIPYLDRLGRDGEQGRKKLTQITRYGMVLLGMFQSFGWMMMIIRIHSPSRMPVVVDPSWPWIILAGSTLVAGSVLIMWLGEQVTERGVGNGISLIIFSGIVERLPHTVLSIVKLIQMEELSVIFALMLAVVVIIVLVLVVWIETAQRKIPIHYAKRVIGRKMYGGQASFLPIKVDQSGVIAVIFAVSVLSAPLILVQFTTEWTVWNFPIVRKITEWLSGTNSVIYSLVYASIIIFFCYFYNSISFNPKDLADSMKKSGSFIPGIRPGESTSIYIQKVLERVTLVGALFIACIAVLPDYLRSAIGSPFFFGGTSLLIVVGVSLDTVGQIESHLIMCHYEGFIKDGRVKGRWFKVK
SIO_010081: H0I88_RS00710
subclass of: SO_0000673
so part of: H0I88_RS00710
location: 159577..160923
location: region:159577-160923:1
so has part: feature:159577-160923:1:exon

WP_015423113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159577-160923:1:exon

H0I88_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00715
old locus tag: TGRD_102
old locus tag: TGRD_RS00710
so part of: sequence
location: 160927..161565
location: region:160927-161565:1
so has part: feature:160927-161565:1:exon
subclass of: SO_0000010

position:160927:1
position: 160927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161565:1
position: 161565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160927-161565:1:exon

H0I88_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00715
old locus tag: TGRD_102
old locus tag: TGRD_RS00710
EC number: 2.7.4.3
inference: COORDINATES: protein motif:HMM:NF001381.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate kinase
translation: MNYIILGPPGAGKGTQAKKIAVKFGILHLSTGDMFREAKKSDESISKLLSSGQLVPDEIVVNMVRKRLEKNNIKKGFLLDGFPRTVKQTGELDRMLMSENIKIDSVFLISVPFEEAAKRIAGRIVCACGASYHTMLLPPKEFGKCDCCGGVLFHRSDDKEEDIIRDRFSVYEKQTKPLIEYYKESGLLIYIDGLKSESDVFEQISGCIINGE
SIO_010081: H0I88_RS00715
subclass of: SO_0000673
so part of: H0I88_RS00715
location: 160927..161565
location: region:160927-161565:1
so has part: feature:160927-161565:1:exon

WP_015423114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160927-161565:1:exon

H0I88_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: map
locus tag: H0I88_RS00720
old locus tag: TGRD_103
old locus tag: TGRD_RS00715
so part of: sequence
location: 161555..162346
location: region:161555-162346:1
so has part: feature:161555-162346:1:exon
subclass of: SO_0000010

position:161555:1
position: 161555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162346:1
position: 162346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161555-162346:1:exon

H0I88_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: map
locus tag: H0I88_RS00720
old locus tag: TGRD_103
old locus tag: TGRD_RS00715
EC number: 3.4.11.18
inference: COORDINATES: protein motif:HMM:TIGR00500.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MGNKLFFEKRNIELKTMKEIERMRTASSVVGEILQKLSEIIKPGITTKDIDIFSEKYIRSLNMVPAFLGVKGISCPFPASACVSVNDEVVHGIPNTSRVLKSGDIVSVDMGVIYEGYYGDAAMTYAVGDISTSAAKLLEITELSLQKGIEQALSGKRLGDISYAIQKTAEDAGFSVVRDFVGHGIGRSLHEEPQIPNFGRACVGIKLLPGMVLAIEPMVNAGSYEVCMLDDSWTVVTKDGGLSAHFEHTVAITENGCEILTKV
SIO_010081: H0I88_RS00720
subclass of: SO_0000673
so part of: H0I88_RS00720
location: 161555..162346
location: region:161555-162346:1
so has part: feature:161555-162346:1:exon

WP_015423115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161555-162346:1:exon

H0I88_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: infA
locus tag: H0I88_RS00725
old locus tag: TGRD_104
old locus tag: TGRD_RS00720
so part of: sequence
location: 162348..162566
location: region:162348-162566:1
so has part: feature:162348-162566:1:exon
subclass of: SO_0000010

position:162348:1
position: 162348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162566:1
position: 162566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162348-162566:1:exon

H0I88_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: infA
locus tag: H0I88_RS00725
old locus tag: TGRD_104
old locus tag: TGRD_RS00720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MGKEEKIIVDGKILESLSNALFKVEIEGKHIVLAHICGKMRMHYIKILPGDKVKVELSPYDLKRGRITYREK
SIO_010081: H0I88_RS00725
subclass of: SO_0000673
so part of: H0I88_RS00725
location: 162348..162566
location: region:162348-162566:1
so has part: feature:162348-162566:1:exon

WP_015423116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162348-162566:1:exon

H0I88_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmJ
locus tag: H0I88_RS00730
old locus tag: TGRD_105
old locus tag: TGRD_RS00725
so part of: sequence
location: 162846..162959
location: region:162846-162959:1
so has part: feature:162846-162959:1:exon
subclass of: SO_0000010

position:162846:1
position: 162846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162959:1
position: 162959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162846-162959:1:exon

H0I88_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmJ
locus tag: H0I88_RS00730
old locus tag: TGRD_105
old locus tag: TGRD_RS00725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVKASVKPICQKCKVVKRKGVVRVICQDPRHKQRQG
SIO_010081: H0I88_RS00730
subclass of: SO_0000673
so part of: H0I88_RS00730
location: 162846..162959
location: region:162846-162959:1
so has part: feature:162846-162959:1:exon

WP_095558973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162846-162959:1:exon

H0I88_RS06175
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06175
so part of: sequence
location: 162923..163117
location: region:162923-163117:1
so has part: feature:162923-163117:1:exon
subclass of: SO_0000010

position:162923:1
position: 162923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163117:1
position: 163117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162923-163117:1:exon

H0I88_RS06175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGSQTQTETRINRDRFKRAELTNVDESCSMCPPPPPPLIGEGKSATSELFPINRFGGIDKWLA
SIO_010081: H0I88_RS06175
subclass of: SO_0000673
so part of: H0I88_RS06175
location: 162923..163117
location: region:162923-163117:1
so has part: feature:162923-163117:1:exon

WP_232501254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162923-163117:1:exon

H0I88_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsM
locus tag: H0I88_RS00735
old locus tag: TGRD_106
old locus tag: TGRD_RS00730
so part of: sequence
location: 163105..163497
location: region:163105-163497:1
so has part: feature:163105-163497:1:exon
subclass of: SO_0000010

position:163105:1
position: 163105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163497:1
position: 163497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163105-163497:1:exon

H0I88_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsM
locus tag: H0I88_RS00735
old locus tag: TGRD_106
old locus tag: TGRD_RS00730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003128035.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARVAGIDLPNNKRLDIALRYIYGIGPAISDEIIKELSLNPAKRVKDLTEEEVGRINNLITKNLKVEGDLRREVQSNIKRLIEIRSYRGLRHRRNLPVRGQRTKTNARTRRGKRKTVGAGKSTSSIKRVK
SIO_010081: H0I88_RS00735
subclass of: SO_0000673
so part of: H0I88_RS00735
location: 163105..163497
location: region:163105-163497:1
so has part: feature:163105-163497:1:exon

WP_015423118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163105-163497:1:exon

H0I88_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsK
locus tag: H0I88_RS00740
old locus tag: TGRD_107
old locus tag: TGRD_RS00735
so part of: sequence
location: 163811..164206
location: region:163811-164206:1
so has part: feature:163811-164206:1:exon
subclass of: SO_0000010

position:163811:1
position: 163811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164206:1
position: 164206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163811-164206:1:exon

H0I88_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsK
locus tag: H0I88_RS00740
old locus tag: TGRD_107
old locus tag: TGRD_RS00735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAGEKNAVGSSKKKKYTGGVAKAYILSTFNNTIVNITDEKGNTLAWASAGVSGFKGTKKGTPFAAQMTAASVGRKVMGIGVKQIAIFIKGPGPGRETAIRGLQSSGLGITTIKDITPVPHDGCRPPKLRRV
SIO_010081: H0I88_RS00740
subclass of: SO_0000673
so part of: H0I88_RS00740
location: 163811..164206
location: region:163811-164206:1
so has part: feature:163811-164206:1:exon

WP_015423119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163811-164206:1:exon

H0I88_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsD
locus tag: H0I88_RS00745
old locus tag: TGRD_108
old locus tag: TGRD_RS00740
so part of: sequence
location: 164290..164916
location: region:164290-164916:1
so has part: feature:164290-164916:1:exon
subclass of: SO_0000010

position:164290:1
position: 164290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164916:1
position: 164916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164290-164916:1:exon

H0I88_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsD
locus tag: H0I88_RS00745
old locus tag: TGRD_108
old locus tag: TGRD_RS00740
inference: COORDINATES: protein motif:HMM:NF003717.0
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MSRYLGSVCKLCRREKEKLFLKGERCSSNCALNRKRGKNSPGQHGASKVKMSDYAKHLREKQKARRMYGLTEEQFSNYYKTAEKMKGSAGDNLLKLLELRLDNVVYRLGLASSKKMARQIVNHGNILVNEKKIDVPRYRLKIGDVITFPEKYKSNVIIKKLIEKMVSSIPAWLSFDKSRIAGTVVSEPLAGETSHPINSQLIVEYYSK
SIO_010081: H0I88_RS00745
subclass of: SO_0000673
so part of: H0I88_RS00745
location: 164290..164916
location: region:164290-164916:1
so has part: feature:164290-164916:1:exon

WP_015423120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164290-164916:1:exon

H0I88_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00750
old locus tag: TGRD_109
old locus tag: TGRD_RS00745
so part of: sequence
location: 164957..165928
location: region:164957-165928:1
so has part: feature:164957-165928:1:exon
subclass of: SO_0000010

position:164957:1
position: 164957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165928:1
position: 165928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164957-165928:1:exon

H0I88_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00750
old locus tag: TGRD_109
old locus tag: TGRD_RS00745
EC number: 2.7.7.6
inference: COORDINATES: protein motif:HMM:NF003513.0
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MKALDLEKLRKLILDEKTATKFYGHFSAGPFERGYGHTIGNSLRRILLSSLEGAAITSVKIAGAFHEFAVLKGVKEDVAQIVLNLKRIKVKLHSEGPEKLYLKVKKAGTVTAKDIEANASVEIMNPEQEIANIDNGTTLEMELEASLGKGYVLAEEMKSNGYSSGTIILDSLFSPIIKVNYEVENTRVEQTLNYDKLIIEIWTDGSVSPKDALMRSAEILRKILVIFTDNAFKTEEVSADKEEQDGILGKPVSIMDISVKTLKSLKSAGIETVEDLVKIKEEDLLNFNNLSKRSCEEIKNRVKELGLSLGMKIEDGEVNDKNL
SIO_010081: H0I88_RS00750
subclass of: SO_0000673
so part of: H0I88_RS00750
location: 164957..165928
location: region:164957-165928:1
so has part: feature:164957-165928:1:exon

WP_015423121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164957-165928:1:exon

H0I88_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplQ
locus tag: H0I88_RS00755
old locus tag: TGRD_110
old locus tag: TGRD_RS00750
so part of: sequence
location: 165912..166265
location: region:165912-166265:1
so has part: feature:165912-166265:1:exon
subclass of: SO_0000010

position:165912:1
position: 165912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166265:1
position: 166265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165912-166265:1:exon

H0I88_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplQ
locus tag: H0I88_RS00755
old locus tag: TGRD_110
old locus tag: TGRD_RS00750
inference: COORDINATES: protein motif:HMM:TIGR00059.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MIKTYNGSKLGIASSHRKALLRNLAAALFLYEKITTTLSKAKELVSYSEKLVTKAKKADLSAMRAINGEINSKAAVKKIFDILVPRYKERSGGYTQILKVGTRRGDSADVAIVKLVT
SIO_010081: H0I88_RS00755
subclass of: SO_0000673
so part of: H0I88_RS00755
location: 165912..166265
location: region:165912-166265:1
so has part: feature:165912-166265:1:exon

WP_015423122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165912-166265:1:exon

H0I88_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00760
old locus tag: TGRD_111
old locus tag: TGRD_RS00755
so part of: sequence
location: 166519..167547
location: region:166519-167547:1
so has part: feature:166519-167547:1:exon
subclass of: SO_0000010

position:166519:1
position: 166519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167547:1
position: 167547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166519-167547:1:exon

H0I88_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00760
old locus tag: TGRD_111
old locus tag: TGRD_RS00755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007115517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MFNYIFGLFSNDMGIDLGTASVLVFIKGQNIVLREPSVVAMERDTKRVLAIGMEAKKMLGKTPANIIAVRPLRNGVIADFEATEKMIRYFIRKVHKKRTLLHPRIVIGVPSGITEVERRAVRESAEQAGAREVYLIDEPMAAAIGAGIQIQEPEGSMIVDIGGGTTEVAIISLGGMVIAKSLDIAGDKMDEAIVQYFRRKYNLTIGENTAEVVKMKIGSVFPLEEELSVDVKGRDLLTGLPKTVNISSEEVRVALSEPIKKITEIVKNVLEETPAELSADLIDRGIILSGGGSLVKGLPDLLSKETELPVNRADDPLGCVAKGTGSYLDELDNIKNSRKRRM
SIO_010081: H0I88_RS00760
subclass of: SO_0000673
so part of: H0I88_RS00760
location: 166519..167547
location: region:166519-167547:1
so has part: feature:166519-167547:1:exon

WP_015423123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166519-167547:1:exon

H0I88_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00765
old locus tag: TGRD_112
old locus tag: TGRD_RS00760
so part of: sequence
location: 167603..168436
location: region:167603-168436:1
so has part: feature:167603-168436:1:exon
subclass of: SO_0000010

position:167603:1
position: 167603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168436:1
position: 168436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167603-168436:1:exon

H0I88_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00765
old locus tag: TGRD_112
old locus tag: TGRD_RS00760
inference: COORDINATES: protein motif:HMM:NF016011.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MCQHQKSKYENIIFVFLLLIGFFFIAGRLTSPVKLIKNLVYYISYPTLRTADCIFRSMETFADNVKAIVYTHRENIVFKQKNQELTDKLRSYDAISEEYNNLSRLLKLTKIKNIICVFAGISFGALDERYQWYILDKGGADGLYNELPVAMLNKENDILCVSGKIIETYKTSSKVVLITNSISILPVEIKDKGINCLAEGSNSSLLKITYIPFDADVKPGDEIVVSGLSAVFQKGMPVGVITAVSEGVSADFKTAAAKVFYENNILNKAVVLVPQKE
SIO_010081: H0I88_RS00765
subclass of: SO_0000673
so part of: H0I88_RS00765
location: 167603..168436
location: region:167603-168436:1
so has part: feature:167603-168436:1:exon

WP_015423124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167603-168436:1:exon

H0I88_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: mreD
locus tag: H0I88_RS00770
old locus tag: TGRD_113
old locus tag: TGRD_RS00765
so part of: sequence
location: 168433..168939
location: region:168433-168939:1
so has part: feature:168433-168939:1:exon
subclass of: SO_0000010

position:168433:1
position: 168433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168939:1
position: 168939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168433-168939:1:exon

H0I88_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: mreD
locus tag: H0I88_RS00770
old locus tag: TGRD_113
old locus tag: TGRD_RS00765
inference: COORDINATES: protein motif:HMM:TIGR03426.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MKKLIFYFFLYFIFCMLQFFFGRYINIYGIFPNFILIFVVYLGLSKGIINTQLMGFLFGLTWDVFSTDIFGIRTVMFTVIGYLAGRFCKDFDREKIFTQIVIMFFAGAIYWLGFGLIYFIFLDNGNCAFSFSILSVSSKILVTATFAPLVFYILEKMDIIWHHDTTER
SIO_010081: H0I88_RS00770
subclass of: SO_0000673
so part of: H0I88_RS00770
location: 168433..168939
location: region:168433-168939:1
so has part: feature:168433-168939:1:exon

WP_015423125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168433-168939:1:exon

H0I88_RS06355
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06355
so part of: sequence
location: complement(169000..169125)
location: region:169000-169125:-1
so has part: feature:169000-169125:-1:exon
subclass of: SO_0000010

position:169000:-1
position: 169000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169125:-1
position: 169125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169000-169125:-1:exon

H0I88_RS06355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYIRTQMGGGGGGGGDTTPRELLSASLLMFNKTLSAFHET
SIO_010081: H0I88_RS06355
subclass of: SO_0000673
so part of: H0I88_RS06355
location: complement(169000..169125)
location: region:169000-169125:-1
so has part: feature:169000-169125:-1:exon

WP_269763544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169000-169125:-1:exon

H0I88_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: mrdA
locus tag: H0I88_RS00775
old locus tag: TGRD_114
old locus tag: TGRD_RS00770
so part of: sequence
location: 170099..171880
location: region:170099-171880:1
so has part: feature:170099-171880:1:exon
subclass of: SO_0000010

position:170099:1
position: 170099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171880:1
position: 171880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170099-171880:1:exon

H0I88_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: mrdA
locus tag: H0I88_RS00775
old locus tag: TGRD_114
old locus tag: TGRD_RS00770
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:TIGR03423.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MVWQKEDISAYEAFLKKHKMILVFFIFLFICLSMRLFYLQIVKGSSYRKVSEQQRIHNTYERAPRGVIYSADNAILAENEFSYVALFYPFEQQWTLSDESIKELNKILGRNIKFTADKNWRYGTFIKLADNITIEEMFKIKEKKLILKDISVIKKPHRIYYYPEVASHIIGYIGEIRADEIEELSEQGYKVGDYIGRGGVEQSYDKYLQGRDGDWQTEVNAKGYKVKSFKYVPPEIGASVYLTVDLKLQKVAYDALKNSSTGRGAAVVLDTRTGAVKALVSCPGFDTNRVGTKDFGIYLKDKKLPLFNRSLQALYPPGSLFKIITFVAAVELLNVDAEKTMHCDGSFELGDRHYSCWYKPGHGEMNLISATVQSCNIYFYQLGLKLGIKNLEKYAKNFHLGQKTEIDLPNEKRGFVPSPEWKKLKSKVSWLQGDTVIFAIGQGALWATPLQMAYIIAAVANKGVYYKPYIVDRVIDFNGNEVYKHTLECAGRTDVSDRTWDLLYKALLEVVESGTGRRSRLSGIKIAGKTGTAQNPHGKDHAWFISYAPADSPEIAIAVIVENGGGGGLNAVPVGRKIYEAYFNVESEKEEQQ
SIO_010081: H0I88_RS00775
subclass of: SO_0000673
so part of: H0I88_RS00775
location: 170099..171880
location: region:170099-171880:1
so has part: feature:170099-171880:1:exon

WP_015423126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170099-171880:1:exon

H0I88_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rodA
locus tag: H0I88_RS00780
old locus tag: TGRD_115
old locus tag: TGRD_RS00775
so part of: sequence
location: 171877..173223
location: region:171877-173223:1
so has part: feature:171877-173223:1:exon
subclass of: SO_0000010

position:171877:1
position: 171877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173223:1
position: 173223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171877-173223:1:exon

H0I88_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rodA
locus tag: H0I88_RS00780
old locus tag: TGRD_115
old locus tag: TGRD_RS00775
inference: COORDINATES: protein motif:HMM:TIGR02210.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MIDKKQFFQHLISDIDWRLISVLLILMLISFIAIYSAGVNYRISFKYLSVQILAFGIGFIWIFLFASFNYQHYRRFDKFIYISSLALLVSVLIFGSVKRGTRGWFDFGFISFQPVEIAKVMFILALASFLDKRAEESRKISFLIYAFTILAGHLVLIVMQPDFSSTLSYFPVTLVLLFMAGVNPFYLLCSTVLGSLAAGIPLLETFLDMPLKSLGSETFLTSLGVSLKTGWTGIYIIAAVLFLIAGGWYLLWKFRVKIPIIYPAVLCGAILIGCAASIPVEKSLKDYQRKRLVVFLNPKVDPRGAGYNIIQSKIAIGSGRFTGKGFKRGTQTQLGFLPEQHTDFIFSVIGEEGGWIISQLTLFLYIFFIWRALVIAKEARDRYGSLVAVGFAAMFTFYAVINIGMVMGIMPVTGMPLLLLSYGGSSIFSSLCAVGILCSIHIRRHIYY
SIO_010081: H0I88_RS00780
subclass of: SO_0000673
so part of: H0I88_RS00780
location: 171877..173223
location: region:171877-173223:1
so has part: feature:171877-173223:1:exon

WP_015423127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171877-173223:1:exon

H0I88_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00785
old locus tag: TGRD_RS05815
so part of: sequence
location: 173340..173501
location: region:173340-173501:1
so has part: feature:173340-173501:1:exon
subclass of: SO_0000010

position:173340:1
position: 173340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173501:1
position: 173501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173340-173501:1:exon

H0I88_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00785
old locus tag: TGRD_RS05815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLVLFVALAAVFVLSFVSCSGSKSEDTSAENGNVESGVQEPGGSNADVLQQ
SIO_010081: H0I88_RS00785
subclass of: SO_0000673
so part of: H0I88_RS00785
location: 173340..173501
location: region:173340-173501:1
so has part: feature:173340-173501:1:exon

WP_158302762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173340-173501:1:exon

H0I88_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00790
old locus tag: TGRD_116
old locus tag: TGRD_RS00780
so part of: sequence
location: 174608..176083
location: region:174608-176083:1
so has part: feature:174608-176083:1:exon
subclass of: SO_0000010

position:174608:1
position: 174608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176083:1
position: 176083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174608-176083:1:exon

H0I88_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00790
old locus tag: TGRD_116
old locus tag: TGRD_RS00780
inference: COORDINATES: protein motif:HMM:NF012640.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate synthase component I family protein
translation: MIRPSFEEAKKFFEDCTIVPVCTEIFADIRTSVEILKIFTSANKKCYLLESVESFAFGETWGRYSFLGCDPKFTVRCNNNKIFIDNGAKKEITTDNPVKILRDIISEYKSPKIEYMPPFTGGLAGYFSYDFVKYGKKSLNLSNLNDENFDDFYLMLFDTIIAFDHLKQKIFIVVNVPVRDFEKNFIKAEEKLKKMEYLIRNGVAKKEQKSELKSDFKMLHDKKEFINMVEKVKGHIREGDIFQAVISNRAEADFSGSLIQTYRVLRTTNPSPYMFYFNFGDIEIAGASPETLVTLKNKKITNYALAGTCRRGANAAEDEFLISQLLNDEKELSEHNMLVDLGRNDLGKVSEFGSVKVTEYMKILKFSHVSHIASVLSSTIEDGYDHLDALSAVLPAGTLSGAPKKRACEIINDLEKHKRGTYGGAIGYIDFTGNMDMCIAIRMVKLQNGKVYVQSGAGVVADSDPEKEYNECSQKARAVINALQIAQEEKI
SIO_010081: H0I88_RS00790
subclass of: SO_0000673
so part of: H0I88_RS00790
location: 174608..176083
location: region:174608-176083:1
so has part: feature:174608-176083:1:exon

WP_015423128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174608-176083:1:exon

H0I88_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00795
old locus tag: TGRD_117
old locus tag: TGRD_RS00785
so part of: sequence
location: 176080..176658
location: region:176080-176658:1
so has part: feature:176080-176658:1:exon
subclass of: SO_0000010

position:176080:1
position: 176080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176658:1
position: 176658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176080-176658:1:exon

H0I88_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00795
old locus tag: TGRD_117
old locus tag: TGRD_RS00785
EC number: 4.1.3.27
inference: COORDINATES: protein motif:HMM:NF012345.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminodeoxychorismate/anthranilate synthase component II
translation: MILIIDNYDSFSYNLYQYVGTINKDVKVIKNDEMTVKEIEELNATNLIISPGPGRPDAAGVCEETIKYFKGKIPILGVCLGHQAICEVFGAKITYAKTLKHGKTSDIHIANGSPVFKGLSPVLRAARYHSLIADRATIPDELLVIAEDEESQVMGVKHQDCDLYGLQFHPESVLTKNGMTIIENFLSLRGTR
SIO_010081: H0I88_RS00795
subclass of: SO_0000673
so part of: H0I88_RS00795
location: 176080..176658
location: region:176080-176658:1
so has part: feature:176080-176658:1:exon

WP_015423129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176080-176658:1:exon

H0I88_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trpD
locus tag: H0I88_RS00800
old locus tag: TGRD_118
old locus tag: TGRD_RS00790
so part of: sequence
location: 176655..177665
location: region:176655-177665:1
so has part: feature:176655-177665:1:exon
subclass of: SO_0000010

position:176655:1
position: 176655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177665:1
position: 177665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176655-177665:1:exon

H0I88_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trpD
locus tag: H0I88_RS00800
old locus tag: TGRD_118
old locus tag: TGRD_RS00790
EC number: 2.4.2.18
inference: COORDINATES: protein motif:HMM:TIGR01245.1
GO function: GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate phosphoribosyltransferase
translation: MIREAIYEIVNRNNLTIDKTKEVMNRIMDGGATDAQIASFLTSLRLKGETIEEITACAMVMREKCQKLNPEFDVLDIVGTGGDELATFNISTISSFIIAAAGVPVAKHGNRSVSSKCGSADLLEVLGVNIMLTPQQCEAILKKVGMCFLMAQTFHSSMKYVAKVRKELGIRTIFNILGPLANPAKASYELIGVYDENLVEPIASVLVNLGVKRAMVVHGHDGLDEITLSDTTTICEVNRGRLNSFFITPEQFGLKRCSLSELIGGTPQENREIALNILNGEQGAKRDTVVLNSAVCLYMFYDNMTLKQCLRMAQDMIDSKKALNKLDEFIKASHET
SIO_010081: H0I88_RS00800
subclass of: SO_0000673
so part of: H0I88_RS00800
location: 176655..177665
location: region:176655-177665:1
so has part: feature:176655-177665:1:exon

WP_015423130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176655-177665:1:exon

H0I88_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00805
old locus tag: TGRD_RS05820
so part of: sequence
location: 177655..177792
location: region:177655-177792:1
so has part: feature:177655-177792:1:exon
subclass of: SO_0000010

position:177655:1
position: 177655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177792:1
position: 177792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177655-177792:1:exon

H0I88_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00805
old locus tag: TGRD_RS05820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLKGKEMCLIAVCLACPFERCCPVGVIRTNGAQSKAAGFNRCGV
SIO_010081: H0I88_RS00805
subclass of: SO_0000673
so part of: H0I88_RS00805
location: 177655..177792
location: region:177655-177792:1
so has part: feature:177655-177792:1:exon

WP_158302763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177655-177792:1:exon

H0I88_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trpC
locus tag: H0I88_RS00810
old locus tag: TGRD_119
old locus tag: TGRD_RS00795
so part of: sequence
location: 177997..178773
location: region:177997-178773:1
so has part: feature:177997-178773:1:exon
subclass of: SO_0000010

position:177997:1
position: 177997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178773:1
position: 178773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177997-178773:1:exon

H0I88_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trpC
locus tag: H0I88_RS00810
old locus tag: TGRD_119
old locus tag: TGRD_RS00795
EC number: 4.1.1.48
inference: COORDINATES: protein motif:HMM:NF001377.0
GO function: GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0006568 - tryptophan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indole-3-glycerol phosphate synthase TrpC
translation: MILDKIVAATKVRVEKAKLQKSFKTAKREALLNKKKNFVSFKKALSKAGINFICEVKKASPSKGLISTDFKYKEIALEYEKTGAAAISVLTEPNFFLGSIRYLQEIKSIVKIPVLRKDFIIDSYQIYESRVIGADAVLLICAVLSYDVLKEFLETAQGLGMSCLVEAHNEEEIETALKAGAEIIGVNNRNLRTFEVDFGNSMKLRRLVPVDKIFVSESGIKTKKHIDILKANDVNAVLIGEELMKSGNIAERLRELKD
SIO_010081: H0I88_RS00810
subclass of: SO_0000673
so part of: H0I88_RS00810
location: 177997..178773
location: region:177997-178773:1
so has part: feature:177997-178773:1:exon

WP_015423131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177997-178773:1:exon

H0I88_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00815
old locus tag: TGRD_120
old locus tag: TGRD_RS00800
so part of: sequence
location: 178987..179589
location: region:178987-179589:1
so has part: feature:178987-179589:1:exon
subclass of: SO_0000010

position:178987:1
position: 178987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179589:1
position: 179589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178987-179589:1:exon

H0I88_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00815
old locus tag: TGRD_120
old locus tag: TGRD_RS00800
inference: COORDINATES: protein motif:HMM:NF012900.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylanthranilate isomerase
translation: MPKIKICGLKREEDVSFVNIAKPDYAGFVFAGVKRKIDFNTAVRFRSLLDDTIQSVGVFVNDKIDNIVNLCEDKTIDLVQLHGGEDESYIGRLKERIKKPVVKAVRVKDKIYSAATKADFMLFDTYSSFEYGGSGKIFDWDLLKEFRNPFFLAGGLNRDNIAEAVKKLNPYCVDLSSGVETNGVKDLNKIIETVKILRSL
SIO_010081: H0I88_RS00815
subclass of: SO_0000673
so part of: H0I88_RS00815
location: 178987..179589
location: region:178987-179589:1
so has part: feature:178987-179589:1:exon

WP_015423132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178987-179589:1:exon

H0I88_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trpB
locus tag: H0I88_RS00820
old locus tag: TGRD_121
old locus tag: TGRD_RS00805
so part of: sequence
location: 179748..180932
location: region:179748-180932:1
so has part: feature:179748-180932:1:exon
subclass of: SO_0000010

position:179748:1
position: 179748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180932:1
position: 180932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179748-180932:1:exon

H0I88_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trpB
locus tag: H0I88_RS00820
old locus tag: TGRD_121
old locus tag: TGRD_RS00805
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018036536.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit beta
translation: MSKGKFGIHGGQYITETLMSAVNELESAYNSFKNDGHFNEELTALLNGYAGRPSELYYAENVTEKLGGAKIYLKREDLNHTGSHKINNVLGQTLLAKKMGKKRVIAETGAGQHGVATATAAALLGMECEIFMGEEDTERQALNVFRMQLLGAEVHPVKSGTKTLKDAVSETMREWSKRVDDTFYVLGSVMGPHPYPQIVRDFQSVISKEIKEQLMKRESVLPSAVIACVGGGSNSIGAFYNFINDNEVRLIGCEAAGKGVDTFETAATIAKGRLGIFHGMKSYFCQTEKGQIAPVYSISAGLDYPGIGPEHAYLHDTKRAQYVPVTDDEAVGAFEFLSKTEGIIPAIESAHAMHYAIKIAPEMKKDEIIVVCISGRGDKDVAMIAKYKGVNINE
SIO_010081: H0I88_RS00820
subclass of: SO_0000673
so part of: H0I88_RS00820
location: 179748..180932
location: region:179748-180932:1
so has part: feature:179748-180932:1:exon

WP_015423133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179748-180932:1:exon

H0I88_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trpA
locus tag: H0I88_RS00825
old locus tag: TGRD_122
old locus tag: TGRD_RS00810
so part of: sequence
location: 180925..181737
location: region:180925-181737:1
so has part: feature:180925-181737:1:exon
subclass of: SO_0000010

position:180925:1
position: 180925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181737:1
position: 181737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180925-181737:1:exon

H0I88_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trpA
locus tag: H0I88_RS00825
old locus tag: TGRD_122
old locus tag: TGRD_RS00810
EC number: 4.2.1.20
inference: COORDINATES: protein motif:HMM:NF012511.2
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit alpha
translation: MNNIRSSTAASKSRWLITEIFKNGKALITYLTAGDPSLDKTEDYILTMAENGSDLIEIGIPFSDPVAEGETIQNAMTRALSKNIDLDDIFNVVENVRKKSNVPLVFMTYLNPLFSYGYEKFFKKCASTGINGIIVPDMPFEEQEEIKSFTDKYDITIITLIAPTSKERISVLAKQAEGFIYLVSSLGVTGVRSRITTNIDAIVSEIKKVTDTPVAVGFGISTPEQAKKVTKSADGVIIGSAVVKIIAEYKESAASKLAEYVSEIKRVMQD
SIO_010081: H0I88_RS00825
subclass of: SO_0000673
so part of: H0I88_RS00825
location: 180925..181737
location: region:180925-181737:1
so has part: feature:180925-181737:1:exon

WP_015423134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180925-181737:1:exon

H0I88_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00830
old locus tag: TGRD_123
old locus tag: TGRD_RS00815
so part of: sequence
location: complement(182181..183695)
location: region:182181-183695:-1
so has part: feature:182181-183695:-1:exon
subclass of: SO_0000010

position:182181:-1
position: 182181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183695:-1
position: 183695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182181-183695:-1:exon

H0I88_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00830
old locus tag: TGRD_123
old locus tag: TGRD_RS00815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIAVRKRIAEICKTLDIKQGKFKNKQATKIVRLMQKTIFKEFEKELYKYEMSDLHIKALSFYSASAIEIFKNKNNRMYKTEQKIRRLVSRGLIYLIETNLSLRREKNTTIKCNQENFDYLLCFAHWLSELQNNADFCYHNEFDCFIEVTSDYRVNTENSTKYKNFLEKYKQRPDPNAIYPIKNDEIDKNFIEEAKKAFFQDTDIKFEEMCNMIGCLMLELPAEYTKNGYEIASNIFSVKRRKLINDIINIPDLNIDEVNIDKILNFLCISTDKIRQIEGKNFEVLPVWEREKRDNRFQIKPILEIDDNIIFSPVTLHNLLNIWMSAFFDFYLPHEKNLTNLAKAISRWKKRYEKQIVVDIVDVLKKKQFQYVEKEVELHSRDSAGNHPNDLGDYDIIAVDSKNRDIYVIECKFLQKVGSIFEASMEQKRFFFEKKSDEKFQKRIDYIKGNYIRFFKSQNLIVDSSYKIKPFMITNKVFDSFLKKINFPILSFYEFKKLLNTQE
SIO_010081: H0I88_RS00830
subclass of: SO_0000673
so part of: H0I88_RS00830
location: complement(182181..183695)
location: region:182181-183695:-1
so has part: feature:182181-183695:-1:exon

WP_015423135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182181-183695:-1:exon

H0I88_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00835
old locus tag: TGRD_124
old locus tag: TGRD_RS00820
so part of: sequence
location: complement(183947..184333)
location: region:183947-184333:-1
so has part: feature:183947-184333:-1:exon
subclass of: SO_0000010

position:183947:-1
position: 183947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184333:-1
position: 184333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183947-184333:-1:exon

H0I88_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00835
old locus tag: TGRD_124
old locus tag: TGRD_RS00820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTEPFSWIIEPAGNHKRYINKLESGFVGIALSLSNGTFIFLSNNVNLYNIKTGDDADKIYFIERLNYNLFSHYLQFFEKIDVIKNQIIQFLFLTFDYAKKVDNNGFTNNPLVKYVLSDMHPRISQII
SIO_010081: H0I88_RS00835
subclass of: SO_0000673
so part of: H0I88_RS00835
location: complement(183947..184333)
location: region:183947-184333:-1
so has part: feature:183947-184333:-1:exon

WP_015423136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183947-184333:-1:exon

H0I88_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00840
old locus tag: TGRD_125
old locus tag: TGRD_RS00825
so part of: sequence
location: complement(184432..185544)
location: region:184432-185544:-1
so has part: feature:184432-185544:-1:exon
subclass of: SO_0000010

position:184432:-1
position: 184432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185544:-1
position: 185544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184432-185544:-1:exon

H0I88_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00840
old locus tag: TGRD_125
old locus tag: TGRD_RS00825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKINNFGNKNIKSYSEFVIFFNKIRCFLKPTVYDDIICDDFGEVKLAFNDKFYSIIIGTEYEHVFSVLQFLQRLSNLLGADELVENSLIYIDNIINQLAKYNISPYKEPSIRYEIPAEIFFIAVNNLFSTNFYFSINPELVNIFSDTKVIEKHFILHNNINYPLFNSSLLVDLYSYLLKRATKKQIRDHVEFTIIKKIRNIHNSKNVYIYCTVIDNNKPISKHPITFIVFVNNAAIVAINKDAYSEDDLTRELKTIETLHKNGSLVIAYMLKETNAAIKIPLKRDIQIILYSEYTDTTQEISVCKNNHFQCFASDLITMICFSEYDMYDVSKFISYYLRKKEKIMPFSSISDIFLHGKIQIKNLFKEQI
SIO_010081: H0I88_RS00840
subclass of: SO_0000673
so part of: H0I88_RS00840
location: complement(184432..185544)
location: region:184432-185544:-1
so has part: feature:184432-185544:-1:exon

WP_125266973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184432-185544:-1:exon

H0I88_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00845
old locus tag: TGRD_123
old locus tag: TGRD_126
old locus tag: TGRD_RS00830
so part of: sequence
location: 186168..188768
location: region:186168-188768:1
so has part: feature:186168-188768:1:exon
subclass of: SO_0000010

position:186168:1
position: 186168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188768:1
position: 188768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186168-188768:1:exon

H0I88_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00845
old locus tag: TGRD_123
old locus tag: TGRD_126
old locus tag: TGRD_RS00830
inference: COORDINATES: protein motif:HMM:NF013704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MQNINEAKFYQALENIFTGAKIEGDGGYINLLKIKSSYYKLILERFKKDVSAESGIIKDSFKEEFFDKLYSFFEKYFSESGSVYFVKTANWQRVYEQVYTDNKDVILFWKTHMLYYVKSDILFKDISAEISDEQNGWAYNFHFDVGTLKNKQNNEKKNLFFDFSKKEISEKDGKKTYYFNVNYSEGGKKTKTSEISGKLKIKEGILEKAFAVFKKQSEVDFFINKNADAFLNEQLDLYLHQILLNTENKFDQERLDQLKTIKVFAEKIISFIAQFENELVRIWNKPKFVLNSNYVITLDKLTDEIINKLSKHSNLKEQIKEWQELGMVDNNFSFSERSEAHKYLSIDTKRFKDLELDILALFDNLDEALDGRLIHSENYQALNTLQERYKEKIQCIYIDPPYNTNSSPIIYINNYKDSSWLTIIHNRMELSRKLLKDNGINITAIDDIELRYLTVLQDNVFGKNNYITTIITKCNPQGRVADKISKTTEFHILHSKNLATIGKLFIKKNDEKKPFPLKRGGTNSKRVERPNRYYPILVKDNKIYMITDEEYSKIYNREKQLFNDNFVESLKNKYESQGFSFILPINQRDEKVVWQRKFERVKEEKETYIVKNNIIYTSSSDVEIPKTLWQDAKFSNPQYGSSYLKDILGHNKFETPKSINTIKQFLSMFESTGIYLDYFGGSGTTAEAIISANKEDDGDRKYIIIELGAHIDTIIIPRIKKIIFSDCWKNGISQNGKGVSQFFKYYSLEQYENTLRNMKYSENIPSTLWDTKNPFETYIFKADQKFADVLSIESEILEVDFNKLYKDIDFAETISNLKGLPIKRITKTGVLLDGENKEMKTNYKDMANSEKIEFIRLLKPLLWWGE
SIO_010081: H0I88_RS00845
subclass of: SO_0000673
so part of: H0I88_RS00845
location: 186168..188768
location: region:186168-188768:1
so has part: feature:186168-188768:1:exon

WP_015423138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186168-188768:1:exon

H0I88_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00850
old locus tag: TGRD_RS00835
so part of: sequence
location: 188793..188987
location: region:188793-188987:1
so has part: feature:188793-188987:1:exon
subclass of: SO_0000010

position:188793:1
position: 188793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188987:1
position: 188987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188793-188987:1:exon

H0I88_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00850
old locus tag: TGRD_RS00835
inference: COORDINATES: protein motif:HMM:NF024565.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MITRINKIKNFGVFKNFENNGEVPEFKEFNLIYGWNYSGKTMLSRVFRCLEKSEKHRRLFCGET
SIO_010081: H0I88_RS00850
subclass of: SO_0000673
so part of: H0I88_RS00850
location: 188793..188987
location: region:188793-188987:1
so has part: feature:188793-188987:1:exon

WP_095558659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188793-188987:1:exon

H0I88_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00855
old locus tag: TGRD_pseudo_26
old locus tag: TGRD_RS00840
so part of: sequence
location: 189016..189675
location: region:189016-189675:1
so has part: feature:189016-189675:1:exon
subclass of: SO_0000010

position:189016:1
position: 189016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189675:1
position: 189675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189016-189675:1:exon

H0I88_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00855
old locus tag: TGRD_pseudo_26
old locus tag: TGRD_RS00840
inference: COORDINATES: protein motif:HMM:NF024565.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVYIDDPVSSLDSNNLFNIYSFIRDIFYEYKNKNKKYICKCKQLFISTHNIEFYNLFCDWSEKQGYLIKRIKKSHCDESILTKSEDVIEKYKSEYVYLFSLINKFNNDPEPKDTFEHLYYLPNVLRRFVETYLSFKYLSRKSIGENIHDLIPNQVDCERARKFMHYHSHSLTINNLIGFPDLAESTDVVNIIIKAVKKDDSTHYNSLVKAVNNITREKK
SIO_010081: H0I88_RS00855
subclass of: SO_0000673
so part of: H0I88_RS00855
location: 189016..189675
location: region:189016-189675:1
so has part: feature:189016-189675:1:exon

WP_232501245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189016-189675:1:exon

H0I88_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00860
old locus tag: TGRD_124
old locus tag: TGRD_127
old locus tag: TGRD_RS00845
so part of: sequence
location: 189675..192458
location: region:189675-192458:1
so has part: feature:189675-192458:1:exon
subclass of: SO_0000010

position:192458:1
position: 192458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189675-192458:1:exon

H0I88_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00860
old locus tag: TGRD_124
old locus tag: TGRD_127
old locus tag: TGRD_RS00845
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MKIILEKILEQIDYDQLNNWQLPSISCFSENKNLEGFPYQKQALKNITKALYLSFKTFQNGNASPDKQTLHTKYKEYGLKDKAFAVRKFTNNKDKSIGNTSGRFKFFQNYSKDYKVLGGGTEEYVADAAFLNRACFWMSTGSGKSIVLIKTIELLDYLQKQKLIPRKEIMLLLPREDLIKQFKREIEEFNKSRERKIELINLINYEDDKQGFNYDHSIKVYYYRSDLLRDERKESILDYRNYDNEGNWYIFLDEAHRGEKENSSAQNYVSVLSRNGFLFNFSATFTENIDYSTTCFNFNLEKFISEGYGKNLYLSHACFTFAAEKNELSEIEKQQQVLKSLLAFTLIKKSKKQGYYHEPLLITLVNSINTADSDLLLFFKKIEEIATDSIAYQIFDKAKDEFEQELSDNKKYIFGQEKFSFDKELFDKIILKDLLENIFNTKKPGKIELLEGEKEKEIVLKLETTDKPFALIKIGDAKKFQREKLGGNYQYVTSPEKKTVFQGINDNEDINLLLGSRSFYEGWDSNRPNVINMINIGGKEAKKFVLQSIGRGVRIEPVKGKRKRLPENDTNKNRLLETLFIFATDKNSIASIFETIEEQKTKDEELKGIFKNTPHFELYIPKYEEEAPRNNFAKFNLSEQTKENIREYIKEFNKNLLLLKHDISLENLNLLLEKIDDDNFFQIKEDNVYNDMDFLFNKLISHTAVKNKKFSGLKELEDEIIHFKHIKISNLETENVELLNSEIEDVKTGKKKEAEFRELKIKNIAKHYYLPLIYSRKEKIDYINHIIVNESEVKFIQALEKYISRENISSEWMFSKIDETLDEKIGIPYFYRKDNRYRKFSPDFIFWIKKGNNYKIIFIDPKGTSHADYENKVDDFEKLFLSLNTPYPYKGLNIEFDLRLYTDDTNNPIGGKYKKYWHTNGDFSFLK
SIO_010081: H0I88_RS00860
subclass of: SO_0000673
so part of: H0I88_RS00860
location: 189675..192458
location: region:189675-192458:1
so has part: feature:189675-192458:1:exon

WP_015423139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189675-192458:1:exon

H0I88_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00865
old locus tag: TGRD_125
old locus tag: TGRD_128
old locus tag: TGRD_RS00850
so part of: sequence
location: complement(192804..195338)
location: region:192804-195338:-1
so has part: feature:192804-195338:-1:exon
subclass of: SO_0000010

position:192804:-1
position: 192804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195338:-1
position: 195338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192804-195338:-1:exon

H0I88_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00865
old locus tag: TGRD_125
old locus tag: TGRD_128
old locus tag: TGRD_RS00850
inference: COORDINATES: protein motif:HMM:TIGR03960.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03960 family B12-binding radical SAM protein
translation: MKENTTMENCWKVREKSSCYTQLMKKLSKINEILNIVKKPARYINSELNSHPADMSADFSVVLCFPDIYEVGASNLGIEILYHLINEKKLARCERAFAPDIDLELLLKEKKLSLFSLESGSDLKSFDILGFTIQCELVATNIVNILDLSGISIFSKDRKDDEPLIIAGGPALTNPEPFCDFFDMFVLGDGEEAIENIISVCKESKKAGLSRLETLKNLSKIDGVYAPSFYNVKYNDDNTVKSVIPVSEDIKPVVKKRILNLENAYFPGKKIIPFVKTVHDRLNIEVARGCPGQCRFCQASKYYHPWRQRPPEKLLDLIKKGIQSTGFEEISFSSLSCSDYKNLDELLIETNNLCGKSNLSISLPSLRCNKHSLKVARYVNTSKRPTLTFAPEAGTERMRNVIGKYLSEKQIVETLLTASAMGWKVIKLYFMIGLPTEADEDIAGIERLVKLVRKKAKDLNFNITVSPFVPKAQTAFQWAPMAGADEIKRKINLLNKLLPANVKTHNRRAGILEALIAKGDRRLSSVIYKAWQKGARFDQWTDKFVSDIWDEALAESGIDLNFYVYRNIKYDEILPWEHLNFGMSKEALYKEYTKGINETVDIAAIQSYEAQCILPENYAEIKIPADAPVMRLRLRFSKKGAVRFVSHLEQVEVFRRTARRSGLPVAFTAGFSPQVKSSYGPPLSVGQESSSEYMELYFTQKVNIENVKLEFSKALPDGFRLLDVKKVPLNFPAINILSNISEYKIKNADIAQEKIDKFLSQGLIIVEKTKKGKTVEIDAKPLIKSFKNENSVLKLQLRFSSGKSVRPEAVLKKLLGNQDNSGKIYAVERTNLYIETKNGEIYEP
SIO_010081: H0I88_RS00865
subclass of: SO_0000673
so part of: H0I88_RS00865
location: complement(192804..195338)
location: region:192804-195338:-1
so has part: feature:192804-195338:-1:exon

WP_015423140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192804-195338:-1:exon

H0I88_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00870
old locus tag: TGRD_126
old locus tag: TGRD_129
old locus tag: TGRD_RS00855
so part of: sequence
location: 195812..197587
location: region:195812-197587:1
so has part: feature:195812-197587:1:exon
subclass of: SO_0000010

position:195812:1
position: 195812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197587:1
position: 197587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195812-197587:1:exon

H0I88_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00870
old locus tag: TGRD_126
old locus tag: TGRD_129
old locus tag: TGRD_RS00855
inference: COORDINATES: protein motif:HMM:NF013188.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MHEYHLLEIMAVGFTLALAFGFITQKLGLSSIVGYLLAGFFIGPASPGFVANYGLASQLSEAGVILLMFGVGLHFKTEDLVAVKGVAIPGAIIQSAIATVCGILTGTALGLDLKSALILGFGLAVASTVVLLRVLNDNDIVGTVHGHVAIGWLIVEDILTVLILVALPSLIIILSNTRNVVGSIEILKAIGIALARLVLLWILVMKVGGRFVPWLLSKIVKVRSEELFTLTVLVIAFLTAVLAAVVFQASFALGAFLGGMVVGKSKLSHQAGADILPLRDAFAVLFFLAVGMLFDFKFVVEYPQLICVCLVIVLLVKPLTAVFAVSVLGYSVKTALTVASGLAQVGEFSFILAQEAKRLNLAGDIVYNTIVVCSIVSITLNPLLFKKVPPIEKFLHSRKKLWNILNFVADRRINKSNRSKEIAKNLLPTEEYLAQKTSIIVGYGPTGKKVTDALIEYGVKPIVVEINIDTVNSLSSQGQTVIYGDSAKKDILLAAGIKSADYLIITVPSLQVTLETALLASALNSKTRILVRAHFLDSKETLKQAGISGIVFEEEEVSNALTSLLLDDLEKQSLLATASELINQSVNEERK
SIO_010081: H0I88_RS00870
subclass of: SO_0000673
so part of: H0I88_RS00870
location: 195812..197587
location: region:195812-197587:1
so has part: feature:195812-197587:1:exon

WP_015423141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195812-197587:1:exon

H0I88_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00875
old locus tag: TGRD_127
old locus tag: TGRD_130
old locus tag: TGRD_RS00860
so part of: sequence
location: complement(197676..197987)
location: region:197676-197987:-1
so has part: feature:197676-197987:-1:exon
subclass of: SO_0000010

position:197676:-1
position: 197676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197987:-1
position: 197987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197676-197987:-1:exon

H0I88_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00875
old locus tag: TGRD_127
old locus tag: TGRD_130
old locus tag: TGRD_RS00860
inference: COORDINATES: protein motif:HMM:NF017415.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin family protein
translation: MADLKRVFYTGIGLALKGKKKVEEAAKKFVENNKREADEGKKFVDKTIKHAETTKNELSKKINKTVKTTVNKIGFITRKETDNLKNEIEKLKSQLHKSEKKKK
SIO_010081: H0I88_RS00875
subclass of: SO_0000673
so part of: H0I88_RS00875
location: complement(197676..197987)
location: region:197676-197987:-1
so has part: feature:197676-197987:-1:exon

WP_015423142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197676-197987:-1:exon

H0I88_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gatB
locus tag: H0I88_RS00880
old locus tag: TGRD_128
old locus tag: TGRD_131
old locus tag: TGRD_RS00865
so part of: sequence
location: complement(198231..199715)
location: region:198231-199715:-1
so has part: feature:198231-199715:-1:exon
subclass of: SO_0000010

position:198231:-1
position: 198231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199715:-1
position: 199715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198231-199715:-1:exon

H0I88_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gatB
locus tag: H0I88_RS00880
old locus tag: TGRD_128
old locus tag: TGRD_131
old locus tag: TGRD_RS00865
inference: COORDINATES: protein motif:HMM:NF004012.0
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MADYETVVGLEVHMQINTKSKVFCECSTRFGAEPNSNTCIICTSQPGAIPILNKKAVEAVVKTGLALNFSINKRCTFARKQYFYPDVPKNYQITQSEPPLCSRGKLAITIDGKEKIINITRIHLEEDAGKLVHEIGNKKLDYSLLDLNRAGVGLMELVTEPEIISQHEALEFLKELKNIVEYLGTSECNMEEGKMRCDVNVSIRPVGQKELGTRVEIKNMNSISGVRDAIAYEVERQKEVLNSGGKLTQETRLWKAEEGITKSMRSKESALDYRYFPEPDLLPFNLPDSFIEELQKQILELPRARKARFIKDYGISEYDADYLTSTRMIADYYEEALNALKNQKSDSLSGNFVVAAKLLANWISTELNAKLNASKTCIAETHISSQNLAKLVSLILNGTISGKIAKTVFEEMYEKSIEPEKIVKEKGLVQISDESAILRICEEAISESPKAVAEFKSGKERAIGAIVGLVMKKSKGKANPQLVNKILLEKLKAY
SIO_010081: H0I88_RS00880
subclass of: SO_0000673
so part of: H0I88_RS00880
location: complement(198231..199715)
location: region:198231-199715:-1
so has part: feature:198231-199715:-1:exon

WP_015423143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198231-199715:-1:exon

H0I88_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gatA
locus tag: H0I88_RS00885
old locus tag: TGRD_129
old locus tag: TGRD_132
old locus tag: TGRD_RS00870
so part of: sequence
location: complement(200484..201941)
location: region:200484-201941:-1
so has part: feature:200484-201941:-1:exon
subclass of: SO_0000010

position:200484:-1
position: 200484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201941:-1
position: 201941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200484-201941:-1:exon

H0I88_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gatA
locus tag: H0I88_RS00885
old locus tag: TGRD_129
old locus tag: TGRD_132
old locus tag: TGRD_RS00870
inference: COORDINATES: protein motif:HMM:TIGR00132.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
translation: MDEILKTRVKDLCEKIRSGQIKSIEIVKACFKRIKETDPKVKAFLKLNEERSLKQAAQSDDKIKTGAECGSLEGVPIGIKDNIMIKGESMTSASKYLENYISPYDAAVIEKLKEAGVIFVGRTNMDEFAMGGSTETSVYQKTANPWNIDYIPGGSSGGSAAAVSSGMVPFALGSDTGGSIRQPAGFCGIVGYKPSYGLISRYGACALASSFDQIGVFSKTVKDASLLTSFIAVGDYRDPVCETGEQTNYAHGIYNPDILKTVRIGIPKQLSNYKADEEITKYFGDAVNKLKLEGAATVEIDVPAYKYVPALYEVIMCAEVSANIATFDGIRYGYRSSNGRNLNDEYAKSRAESLGYEVKKRILFGTYVLGAKNYYRCYHQAQRVRTLLINQITDAYKKCDFIFSPATLQMPVKFGEKLSEECDIFLTAANLAGLPGITVPCTFTSSGMPMGVHFMGSRFSDAKLFQIADAFERISGFDINKYPNL
SIO_010081: H0I88_RS00885
subclass of: SO_0000673
so part of: H0I88_RS00885
location: complement(200484..201941)
location: region:200484-201941:-1
so has part: feature:200484-201941:-1:exon

WP_015423144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200484-201941:-1:exon

H0I88_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00890
old locus tag: TGRD_130
old locus tag: TGRD_133
old locus tag: TGRD_RS00875
so part of: sequence
location: complement(201944..202936)
location: region:201944-202936:-1
so has part: feature:201944-202936:-1:exon
subclass of: SO_0000010

position:201944:-1
position: 201944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202936:-1
position: 202936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201944-202936:-1:exon

H0I88_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00890
old locus tag: TGRD_130
old locus tag: TGRD_133
old locus tag: TGRD_RS00875
inference: COORDINATES: protein motif:HMM:NF013694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium transporter CorA family protein
translation: MIKAIYSINGTVTTKYKALKISEDYKNKKPNLIWIDIYLENHELEQEETLILSESFKFHEMSIEDCLFPQYPKIEEFGNYIFTAVHGIQLKPHYFQEFEDSIYELDIFIGKDFVVTVHAEELFFLETIFEKAKTRPQIEMKSLENLLYNIFNKVVSSYEFTLEKIDDKMENLEDDILEEPETVNMEEILNIKKVIFAMRKIAESQQTPYIYFTRPNNNLISKEHFVYFRDIYTQCAKMNQSITMRSQAVVSLLEVYMSSVTLRLTEAMKFLTVIATVLMPVLIISGYYGMNIKFPEYSIFGERELWIFAVCLMFVGIIAMLIYFKKKKWF
SIO_010081: H0I88_RS00890
subclass of: SO_0000673
so part of: H0I88_RS00890
location: complement(201944..202936)
location: region:201944-202936:-1
so has part: feature:201944-202936:-1:exon

WP_015423145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201944-202936:-1:exon

H0I88_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gatC
locus tag: H0I88_RS00895
old locus tag: TGRD_131
old locus tag: TGRD_134
old locus tag: TGRD_RS00880
so part of: sequence
location: complement(202966..203262)
location: region:202966-203262:-1
so has part: feature:202966-203262:-1:exon
subclass of: SO_0000010

position:202966:-1
position: 202966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203262:-1
position: 203262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202966-203262:-1:exon

H0I88_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gatC
locus tag: H0I88_RS00895
old locus tag: TGRD_131
old locus tag: TGRD_134
old locus tag: TGRD_RS00880
inference: COORDINATES: protein motif:HMM:TIGR00135.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
translation: MLKEELETTAFLARIHIKEDEKEKYLADLSMMFDYIEILHEPDIADLEPTTHVTKIRNVWREDVVKPCPKEIIEQMLDSAPAKEGTFYKIKKVISGAS
SIO_010081: H0I88_RS00895
subclass of: SO_0000673
so part of: H0I88_RS00895
location: complement(202966..203262)
location: region:202966-203262:-1
so has part: feature:202966-203262:-1:exon

WP_015423146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202966-203262:-1:exon

H0I88_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00900
old locus tag: TGRD_RS00885
so part of: sequence
location: 203708..203950
location: region:203708-203950:1
so has part: feature:203708-203950:1:exon
subclass of: SO_0000010

position:203708:1
position: 203708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203950:1
position: 203950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203708-203950:1:exon

H0I88_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00900
old locus tag: TGRD_RS00885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNNNAFNSGISCVDVLRKTDTIKIKERLLSAAIMPRRIPQKKNFYESDRNKEIVLRGLSQVWECMWDVAIFHRAEGKL
SIO_010081: H0I88_RS00900
subclass of: SO_0000673
so part of: H0I88_RS00900
location: 203708..203950
location: region:203708-203950:1
so has part: feature:203708-203950:1:exon

WP_095558662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203708-203950:1:exon

H0I88_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00905
old locus tag: TGRD_RS05825
so part of: sequence
location: complement(204516..204692)
location: region:204516-204692:-1
so has part: feature:204516-204692:-1:exon
subclass of: SO_0000010

position:204516:-1
position: 204516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204692:-1
position: 204692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204516-204692:-1:exon

H0I88_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00905
old locus tag: TGRD_RS05825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSLFRADKVRKDYSEHGLNTIKKGIDNFNAEQSKEMFKNFKIGKNWRIKNAFNGEEA
SIO_010081: H0I88_RS00905
subclass of: SO_0000673
so part of: H0I88_RS00905
location: complement(204516..204692)
location: region:204516-204692:-1
so has part: feature:204516-204692:-1:exon

WP_158302764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204516-204692:-1:exon

H0I88_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00910
old locus tag: TGRD_132
old locus tag: TGRD_135
old locus tag: TGRD_RS00890
so part of: sequence
location: complement(205501..208302)
location: region:205501-208302:-1
so has part: feature:205501-208302:-1:exon
subclass of: SO_0000010

position:205501:-1
position: 205501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208302:-1
position: 208302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205501-208302:-1:exon

H0I88_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00910
old locus tag: TGRD_132
old locus tag: TGRD_135
old locus tag: TGRD_RS00890
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MSGKILNIDVHESIIDFTADYISKSDKKTALISGGRRPFLFIKKKLAEKQKKAFFSPEFFTNDGFIEEIIFDNTELIKISDIEATFMIFETVKNESPQLLKDKTSFASFMEWSFEILSFIEQLDLENVSEDKLKAVKANAEIGYDVPENINSLLKNIFKIRKSFYNSMEKSSKTTKGHSFLKAAEIESNLLAGNFDEIILMSPFYLHKVEIEIFKKIYNAGKLTVFIHGNPKKYEALMQIYSVFGEPLPDIENKKDEYKLNIYSAFDDQSQGALLKNLISGYSENDLDKTAVIVPDSKMLQSVISEISIVTDRYNVSAGYPAEKTPVFSLLNAIIEAQLSRKGEYYYSKDVMKVLTNPLVKNMEFLGESSISRTAVYKIEEALNQYSGNCLSGRMFVAFKEIIGEKQIIDEISLAVNEVWEYTAPEEIMKMLKEIFDVFFTSWEKIETLNNLSYILSELLEKIYSLSVAANYSLNAEATELLLSLAKELKFGEVSQAKFQNEDVLNTFKKLIKNKRIVLPGSPLKGLQILGLLESRNLSFENVFIVGMIDSAIPAVKKEYSLIPKDIMYALGIEIAKKELEIQQYHFDRLISGAKNLNLIYPDNDKDERSRFIESLIWNKQFENKDINIVKINKFVLPKFLAKQPAKRKYAKTKKIREYLKNMSYTHSKIDAYLSCKLKFYFMHVLILDERTKVGQEFSAVDIGNFVHSFLKDTLCEKLDSKKLQTLEFEKEYFKKFENSFDNSPHFKFREDAFMIKEVLLYRMKNILHYERLRSYKNIYGCEKKYYSNIKTASGETYKFNCRIDRIDTDGENYMIFDYKTGAAPGSIVSNKYFDLMSNNFDRQNIKKAVSSMQLPLYKNIFEKETDFAVLECGIYDIKKAEIIKFPERKEIYDKCIDAVRSLLDEINTGESFEFDEEDKVNCKTCKYFYICT
SIO_010081: H0I88_RS00910
subclass of: SO_0000673
so part of: H0I88_RS00910
location: complement(205501..208302)
location: region:205501-208302:-1
so has part: feature:205501-208302:-1:exon

WP_015423147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205501-208302:-1:exon

H0I88_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00915
old locus tag: TGRD_133
old locus tag: TGRD_136
old locus tag: TGRD_RS00895
so part of: sequence
location: complement(208666..211800)
location: region:208666-211800:-1
so has part: feature:208666-211800:-1:exon
subclass of: SO_0000010

position:208666:-1
position: 208666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211800:-1
position: 211800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208666-211800:-1:exon

H0I88_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00915
old locus tag: TGRD_133
old locus tag: TGRD_136
old locus tag: TGRD_RS00895
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MKEKWQENISTNNAGRPQKPMNKSQIISVLASAGTGKTYNLAKRYLYLLLSSNDNTSIKNIIAVTFTNKAAVEMKYRVIDYLKKAALSLDTGDFFDELELTKDKIAQRSAAVLKDIFKFYDNFNISTIDSFKNRILKSCAMSIDISPNFVIEQDYSDNLLFSLEIFLQKARTSENLRNIILQYLSQYLMKDSGWFPKNNIYNEIEKVFKESGNTGKDIMPYEGVPFRNEIASRSAAIIRKIKKFAVLLPNIQAKKYYSEAVEKVLSTGGKIFFSMDIPVRFAYETIKYIKDAKINAEADELWSEINKDIKSLCDFYMENYYSVYSYIYSKVAFEFDLRSKKDGIVFLNEINKKTVGFFEKDNTVMPEVYYRLSEKYKHFLIDEFQDTSLVQWVGIKRFLEESLAEGGTFFYVGDIKQAIYAFRGGEPEIFDAPSRDFFSADVNIKTLNQNFRSGRTIVDFNNDIFSKENIERFLNEFYKKKNIECGFSKFIKTYSFLRQETPAEHNYGYIEIDVIDKTCENVKEKIKQRFINCVAQVSERFNPKDITTLCRANDEVLTVSSWLLENDFDVESSQTLNIRNNSVIKQIISLLMFINSPIDALSFSSFILGDIFSKISGIENVEFEKFIFACNKRNRAGTFYKTFQDRYENLWDKYFKDFFVKDGFAPVYELTLAALEKFKVTDNFSDSRAFIMRFLELVKDFETQGSGIKNFLEYFDDLKDNEESLYIKSALGNGIKVMTVHKAKGLQFPVVIIPFLKLSVKPDRKPYFDSSGNKIKLFNISKNITKFSHKAKEIYDREKISSLLSELNVTYVSMTRAEYELYAIVPPKSGISNNEIPVLLGNKALTSGVKQTYAQDNNGKDNIVKDSFDSGYKDIQKYLKNVDKTTLDINNSSKKNSIICYALSKITSLKNKNINDCISYALRITKRKFFFEDVKFCREKLNRLFATKKILDLFMHDEKYICNEKKIVNSAGETFRIDKLIVLDDEVITADFQISNDKEEKNKKQVEYRNTLIAEIYPGKKISAYIADIDTADCLLLKRQTLLL
SIO_010081: H0I88_RS00915
subclass of: SO_0000673
so part of: H0I88_RS00915
location: complement(208666..211800)
location: region:208666-211800:-1
so has part: feature:208666-211800:-1:exon

WP_095558663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208666-211800:-1:exon

H0I88_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: smpB
locus tag: H0I88_RS00920
old locus tag: TGRD_134
old locus tag: TGRD_137
old locus tag: TGRD_RS00900
so part of: sequence
location: complement(211772..212221)
location: region:211772-212221:-1
so has part: feature:211772-212221:-1:exon
subclass of: SO_0000010

position:211772:-1
position: 211772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212221:-1
position: 212221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211772-212221:-1:exon

H0I88_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: smpB
locus tag: H0I88_RS00920
old locus tag: TGRD_134
old locus tag: TGRD_137
old locus tag: TGRD_RS00900
inference: COORDINATES: protein motif:HMM:NF003843.0
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MKKKTLSSNRKAYYNYEILEKLETGIVLSGYEVKSARQSNISLVDSVVRFSDCEAFAENMFIASYEQISTHIADYDAKRKRKLLMHKSEINKMRTKVKEKGLTVIPLEVYIGNRGKIKLLIGLAKGKKTYNKKEALKKKDIEREVAREY
SIO_010081: H0I88_RS00920
subclass of: SO_0000673
so part of: H0I88_RS00920
location: complement(211772..212221)
location: region:211772-212221:-1
so has part: feature:211772-212221:-1:exon

WP_095558974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211772-212221:-1:exon

H0I88_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00925
old locus tag: TGRD_RS00905
old locus tag: TGRD_tRNA09
so part of: sequence
location: complement(212427..212499)
location: region:212427-212499:-1
so has part: feature:212427-212499:-1:exon
subclass of: SO_0000663

position:212427:-1
position: 212427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212499:-1
position: 212499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212427-212499:-1:exon

H0I88_RS00925
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00925
old locus tag: TGRD_RS00905
old locus tag: TGRD_tRNA09
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(212464..212466),aa:Thr,seq:tgt)
SIO_010081: H0I88_RS00925
subclass of: SO_0000673
so part of: H0I88_RS00925
location: complement(212427..212499)
location: region:212427-212499:-1
so has part: feature:212427-212499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212427-212499:-1:exon

H0I88_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00930
old locus tag: TGRD_RS00910
so part of: sequence
location: 212865..213059
location: region:212865-213059:1
so has part: feature:212865-213059:1:exon
subclass of: SO_0000010

position:212865:1
position: 212865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213059:1
position: 213059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212865-213059:1:exon

H0I88_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00930
old locus tag: TGRD_RS00910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISWTALTLLYVYFASKRFDYVKTKVDNKVMQVGLLLFRNRLKKAKICLKKCREMTKRFACRLQ
SIO_010081: H0I88_RS00930
subclass of: SO_0000673
so part of: H0I88_RS00930
location: 212865..213059
location: region:212865-213059:1
so has part: feature:212865-213059:1:exon

WP_095558664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212865-213059:1:exon

H0I88_RS06360
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06360
so part of: sequence
location: 214112..214243
location: region:214112-214243:1
so has part: feature:214112-214243:1:exon
subclass of: SO_0000010

position:214112:1
position: 214112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214243:1
position: 214243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214112-214243:1:exon

H0I88_RS06360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIDDKIKCDMMLVVGDIKTDILTIAEETYFYGKSSIITKEYR
SIO_010081: H0I88_RS06360
subclass of: SO_0000673
so part of: H0I88_RS06360
location: 214112..214243
location: region:214112-214243:1
so has part: feature:214112-214243:1:exon

WP_269763545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214112-214243:1:exon

H0I88_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00940
old locus tag: TGRD_135
old locus tag: TGRD_RS00925
so part of: sequence
location: 214262..214900
location: region:214262-214900:1
so has part: feature:214262-214900:1:exon
subclass of: SO_0000010

position:214262:1
position: 214262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214900:1
position: 214900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214262-214900:1:exon

H0I88_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00940
old locus tag: TGRD_135
old locus tag: TGRD_RS00925
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SurA N-terminal domain-containing protein
translation: MNFLRKHIRIIFIVTIVAFIGSSFAGVGYYFFSSKNDFKTFVVVNGIKVPEKLFNSVYTDFRQMINDQQLSDADLKELKTKVIYSLVQDEILYQQSKLYGIVVTDEELRNDLRNSAKFEDNNIFNIRKYHAFLDSIQMTAKEYETMRRKQIAAIKVKMFIASCVKLWNYELENAFKQEPSITENTLIQAKVNFILNEWYLDIVRNSKIAVPK
SIO_010081: H0I88_RS00940
subclass of: SO_0000673
so part of: H0I88_RS00940
location: 214262..214900
location: region:214262-214900:1
so has part: feature:214262-214900:1:exon

WP_095558667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214262-214900:1:exon

H0I88_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00945
old locus tag: TGRD_136
old locus tag: TGRD_138
old locus tag: TGRD_RS00930
so part of: sequence
location: complement(214859..215506)
location: region:214859-215506:-1
so has part: feature:214859-215506:-1:exon
subclass of: SO_0000010

position:214859:-1
position: 214859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215506:-1
position: 215506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214859-215506:-1:exon

H0I88_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00945
old locus tag: TGRD_136
old locus tag: TGRD_138
old locus tag: TGRD_RS00930
EC number: 3.6.1.-
inference: COORDINATES: protein motif:HMM:NF014591.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Maf family protein
translation: MRVNKQIILASSSVRRISLLKQWGLFFKIIPSGADEKINLIKPSYIVKELAYRKGRHVAQRYPDALTLSADTVVVLNGKIIGKPKSKKESEKIIRELNGSIHKVYTGVAVIQKDKCSVFYDTVCIKMRKLPENMLKQLFGKHMDKAGAYAVQDTGDNFVEKIYGDYYTAIGLPYKKLATELKKFKIRLKSSHDLSKNHSHQRLFRDCYFRISDNV
SIO_010081: H0I88_RS00945
subclass of: SO_0000673
so part of: H0I88_RS00945
location: complement(214859..215506)
location: region:214859-215506:-1
so has part: feature:214859-215506:-1:exon

WP_015423150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214859-215506:-1:exon

H0I88_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: argF
locus tag: H0I88_RS00950
old locus tag: TGRD_137
old locus tag: TGRD_139
old locus tag: TGRD_RS00935
so part of: sequence
location: complement(215497..216459)
location: region:215497-216459:-1
so has part: feature:215497-216459:-1:exon
subclass of: SO_0000010

position:215497:-1
position: 215497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216459:-1
position: 216459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215497-216459:-1:exon

H0I88_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: argF
locus tag: H0I88_RS00950
old locus tag: TGRD_137
old locus tag: TGRD_139
old locus tag: TGRD_RS00935
EC number: 2.1.3.3
inference: COORDINATES: protein motif:HMM:NF001986.0
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MAKKDLLSIYDLSTKEIKEILNKAFKLKNDRKHLDVFKGKILGLIFEKPSTRTMVSFTAAMLQLGGTPVFLNTENLQRKRGESIHDTAIVLSRYLDGLMIRSFKHSDLEEFAKYSTAPVINGLTDHEHPCQILADIMTVMEIHKIKTVEALKKIKIVYTGDSNNIANSLLAISAVLGFDFTLISPKEYSPKKRILNKALEYTSSTGAEIKITSDVNDAKNADVIYTDVWTSMGFEAEEKKRKKIFAPYQVNSELLKKASSKCIVLHCLPAIRGEEITEEIMYKYESSIFTQAENRLYVQKAVLLYLLNTSLISPPQKPCA
SIO_010081: H0I88_RS00950
subclass of: SO_0000673
so part of: H0I88_RS00950
location: complement(215497..216459)
location: region:215497-216459:-1
so has part: feature:215497-216459:-1:exon

WP_015423151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215497-216459:-1:exon

H0I88_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00955
old locus tag: TGRD_RS00940
old locus tag: TGRD_tRNA10
so part of: sequence
location: complement(217054..217127)
location: region:217054-217127:-1
so has part: feature:217054-217127:-1:exon
subclass of: SO_0000663

position:217054:-1
position: 217054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217127:-1
position: 217127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217054-217127:-1:exon

H0I88_RS00955
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00955
old locus tag: TGRD_RS00940
old locus tag: TGRD_tRNA10
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(217091..217093),aa:Pro,seq:ggg)
SIO_010081: H0I88_RS00955
subclass of: SO_0000673
so part of: H0I88_RS00955
location: complement(217054..217127)
location: region:217054-217127:-1
so has part: feature:217054-217127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217054-217127:-1:exon

H0I88_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00960
old locus tag: TGRD_138
old locus tag: TGRD_140
old locus tag: TGRD_RS00945
so part of: sequence
location: complement(217184..217558)
location: region:217184-217558:-1
so has part: feature:217184-217558:-1:exon
subclass of: SO_0000010

position:217184:-1
position: 217184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217558:-1
position: 217558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217184-217558:-1:exon

H0I88_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00960
old locus tag: TGRD_138
old locus tag: TGRD_140
old locus tag: TGRD_RS00945
inference: COORDINATES: protein motif:HMM:NF024803.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MFQIPPIPDKEYFTIGEVSQITLVPKHTLRYWESEFKLLRPIRKSSGQRSYRKEEVEFVFKIKNLLYNQRYTIEGVKKYLIGDKRKRLTNLQTNLNLDLEYMPDSKLLKDIKEELKHILKLLKK
SIO_010081: H0I88_RS00960
subclass of: SO_0000673
so part of: H0I88_RS00960
location: complement(217184..217558)
location: region:217184-217558:-1
so has part: feature:217184-217558:-1:exon

WP_015423152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217184-217558:-1:exon

H0I88_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00965
old locus tag: TGRD_139
old locus tag: TGRD_141
old locus tag: TGRD_RS00950
so part of: sequence
location: complement(217573..217833)
location: region:217573-217833:-1
so has part: feature:217573-217833:-1:exon
subclass of: SO_0000010

position:217573:-1
position: 217573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217833:-1
position: 217833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217573-217833:-1:exon

H0I88_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00965
old locus tag: TGRD_139
old locus tag: TGRD_141
old locus tag: TGRD_RS00950
inference: COORDINATES: protein motif:HMM:NF012442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MTKNDIAIALSRILSSKKEAEEAVNKVFEEMSNSLKNGDKVIITGFGSFNMFETKTKRVRNPRTCEKLLIAPMKKIRFKQSKKFFK
SIO_010081: H0I88_RS00965
subclass of: SO_0000673
so part of: H0I88_RS00965
location: complement(217573..217833)
location: region:217573-217833:-1
so has part: feature:217573-217833:-1:exon

WP_015423153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217573-217833:-1:exon

H0I88_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00970
old locus tag: TGRD_140
old locus tag: TGRD_142
old locus tag: TGRD_RS00955
so part of: sequence
location: complement(217908..218900)
location: region:217908-218900:-1
so has part: feature:217908-218900:-1:exon
subclass of: SO_0000010

position:217908:-1
position: 217908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218900:-1
position: 218900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217908-218900:-1:exon

H0I88_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS00970
old locus tag: TGRD_140
old locus tag: TGRD_142
old locus tag: TGRD_RS00955
EC number: 1.1.1.94
inference: COORDINATES: protein motif:HMM:NF000940.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
translation: MKITVLGAGSWGATLAALLFENGHDVTLWEFDAKRAKDLQDRKIKPFNAGTNLPSALVVTNSIKSLKNSEAVLFVIPSQYMRSLCLHLKNNGILLDGKLIISATKGIENKTLLRMSEVIDEIFKGVYRNIAVLSGPSHAEEVCRKIPTAVTSTALNLETAERCRMIFMNEYFRIYNQNDIIGVETGSALKNVFAVASGIVDGLKYGDNTKAAIISRGLKELSRVGIALGGKEQTFYGLSGVGDLMVTCFSKHSRNRAIGQAIGEGKTLDEAEKNLGMVAEGVKNTISAYEIGKKLNIELPIINEVYAVLFEGKNPLKAVSDLMTRCPCHE
SIO_010081: H0I88_RS00970
subclass of: SO_0000673
so part of: H0I88_RS00970
location: complement(217908..218900)
location: region:217908-218900:-1
so has part: feature:217908-218900:-1:exon

WP_015423154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217908-218900:-1:exon

H0I88_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: plsY
locus tag: H0I88_RS00975
old locus tag: TGRD_141
old locus tag: TGRD_143
old locus tag: TGRD_RS00960
so part of: sequence
location: complement(219146..219745)
location: region:219146-219745:-1
so has part: feature:219146-219745:-1:exon
subclass of: SO_0000010

position:219146:-1
position: 219146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219745:-1
position: 219745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219146-219745:-1:exon

H0I88_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: plsY
locus tag: H0I88_RS00975
old locus tag: TGRD_141
old locus tag: TGRD_143
old locus tag: TGRD_RS00960
EC number: 2.3.1.15
inference: COORDINATES: protein motif:HMM:TIGR00023.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
translation: MLIKILYIIITYLCGSIPSAYIVAKANGKVDIRTVGSGNSGATNVFREIGKCAGVITLIADILKGFIPVYFATFIDNSFSYSVAVAAAAMVGHVFTIFLKFKGGKGVATGLGVFFALMRWPSLIALAIFGLAFVFSRYVSLGSICAVISLPLTSYFLGYSTEVVIFTFAITLLIIYRHRTNIKRLIERSENKLRIFKKK
SIO_010081: H0I88_RS00975
subclass of: SO_0000673
so part of: H0I88_RS00975
location: complement(219146..219745)
location: region:219146-219745:-1
so has part: feature:219146-219745:-1:exon

WP_015423155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219146-219745:-1:exon

H0I88_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: der
locus tag: H0I88_RS00980
old locus tag: TGRD_142
old locus tag: TGRD_144
old locus tag: TGRD_RS00965
so part of: sequence
location: complement(219759..221084)
location: region:219759-221084:-1
so has part: feature:219759-221084:-1:exon
subclass of: SO_0000010

position:219759:-1
position: 219759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221084:-1
position: 221084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219759-221084:-1:exon

H0I88_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: der
locus tag: H0I88_RS00980
old locus tag: TGRD_142
old locus tag: TGRD_144
old locus tag: TGRD_RS00965
EC number: 3.6.5.-
inference: COORDINATES: protein motif:HMM:TIGR03594.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MLMLTKVAIVGRPNVGKSALFNRLIGRKKAIIHETPGTTRDRNDHEVSWRDKNFIATDTAGWSTDISAFSKDMSRQLDIAVEKSDIVLFVVDGKTGAHPTDVQIAQQIRLKRKKTILVVNKIDTQAEEIKGYEFYELGFDDVIFVSANHGRSVHDLLDKIWENIKYDRKEKNTWKTLKIILVGKPNVGKSSFINTVAKEERSIVHDTPGTTRDSLTARIQSDGKEYILTDTAGLHRGNKTKDGMEYLSNLSTGHAIEDADVAVLIADASQGIGETEVKIARLLLEKKKPVIVTVNKWDLIEEKEEAAKYFTGQLRERIKFMNWADIIFISAKTGQRLGRIFQEAKLVFEQYSKQLTKEELNDVIRDALAKKPYTNKGRTLKIKEYVQATSKPPVFIFSVNDTDLVHFSYERFLENCLRAKFDFHGTPIVLKFRNYYKKKMD
SIO_010081: H0I88_RS00980
subclass of: SO_0000673
so part of: H0I88_RS00980
location: complement(219759..221084)
location: region:219759-221084:-1
so has part: feature:219759-221084:-1:exon

WP_015423156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219759-221084:-1:exon

H0I88_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00985
old locus tag: TGRD_RS00970
old locus tag: TGRD_tRNA11
so part of: sequence
location: complement(221176..221247)
location: region:221176-221247:-1
so has part: feature:221176-221247:-1:exon
subclass of: SO_0000663

position:221176:-1
position: 221176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221247:-1
position: 221247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221176-221247:-1:exon

H0I88_RS00985
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00985
old locus tag: TGRD_RS00970
old locus tag: TGRD_tRNA11
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(221213..221215),aa:Gly,seq:gcc)
SIO_010081: H0I88_RS00985
subclass of: SO_0000673
so part of: H0I88_RS00985
location: complement(221176..221247)
location: region:221176-221247:-1
so has part: feature:221176-221247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221176-221247:-1:exon

H0I88_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS00990
old locus tag: TGRD_RS00975
old locus tag: TGRD_tRNA12
so part of: sequence
location: complement(221286..221367)
location: region:221286-221367:-1
so has part: feature:221286-221367:-1:exon
subclass of: SO_0000663

position:221286:-1
position: 221286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221367:-1
position: 221367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221286-221367:-1:exon

H0I88_RS00990
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS00990
old locus tag: TGRD_RS00975
old locus tag: TGRD_tRNA12
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(221331..221333),aa:Leu,seq:gag)
SIO_010081: H0I88_RS00990
subclass of: SO_0000673
so part of: H0I88_RS00990
location: complement(221286..221367)
location: region:221286-221367:-1
so has part: feature:221286-221367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221286-221367:-1:exon

H0I88_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: secG
locus tag: H0I88_RS00995
old locus tag: TGRD_143
old locus tag: TGRD_145
old locus tag: TGRD_RS00980
so part of: sequence
location: complement(221392..221655)
location: region:221392-221655:-1
so has part: feature:221392-221655:-1:exon
subclass of: SO_0000010

position:221392:-1
position: 221392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221655:-1
position: 221655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221392-221655:-1:exon

H0I88_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: secG
locus tag: H0I88_RS00995
old locus tag: TGRD_143
old locus tag: TGRD_145
old locus tag: TGRD_RS00980
inference: COORDINATES: protein motif:HMM:TIGR00810.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MSIAFSAFKFIHYTICAGLVLVILLQTAKSGDMAGIFSGGGSDQIFNAPSRMAFIKKVTILMACIFLFTSLMLTKLSPAISVVKLAL
SIO_010081: H0I88_RS00995
subclass of: SO_0000673
so part of: H0I88_RS00995
location: complement(221392..221655)
location: region:221392-221655:-1
so has part: feature:221392-221655:-1:exon

WP_095558669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221392-221655:-1:exon

H0I88_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01000
old locus tag: TGRD_144
old locus tag: TGRD_146
old locus tag: TGRD_RS00985
so part of: sequence
location: complement(221821..223071)
location: region:221821-223071:-1
so has part: feature:221821-223071:-1:exon
subclass of: SO_0000010

position:221821:-1
position: 221821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223071:-1
position: 223071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221821-223071:-1:exon

H0I88_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01000
old locus tag: TGRD_144
old locus tag: TGRD_146
old locus tag: TGRD_RS00985
EC number: 2.7.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006863552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MKNTLKDIDVKGKKVLVRVDYNVPLDANLKITNDKRIAATIPTIQYLLEKNSAIILMAHLGRPKGKIVPGMSLKPVPPRLSEFLGKPVKFVGGDCIDSQSKKAAADLKPGEILLLENLRFHPEEEGKNASGEKDKAAMDVFAKELASMGEVFVQDAFGTVHRAHASTTAIVKYAKDVVAGFLVEKELKFLGEALENPVRPFLAILGGAKVSDKINVIKNLLNKADTIIIGGAMAYTFLKSQEVITGTSLVEDDKLDLAIELIKKSKERKVALLLPIDHIITDKVDFVNKQMPGDAIVKNTADEAIPEGFMGVDIGLKSIEKFSKIIKSAKTIVWNGPLGIFEIDEFSKGTIKIANLVAKSTDNGAISIVGGGDSIAAVKKAGVDKRINHISTGGGASLEFLEDKELPGIAALPDKK
SIO_010081: H0I88_RS01000
subclass of: SO_0000673
so part of: H0I88_RS01000
location: complement(221821..223071)
location: region:221821-223071:-1
so has part: feature:221821-223071:-1:exon

WP_015423158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221821-223071:-1:exon

H0I88_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gap
locus tag: H0I88_RS01005
old locus tag: TGRD_145
old locus tag: TGRD_147
old locus tag: TGRD_RS00990
so part of: sequence
location: complement(223160..224167)
location: region:223160-224167:-1
so has part: feature:223160-224167:-1:exon
subclass of: SO_0000010

position:223160:-1
position: 223160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224167:-1
position: 224167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223160-224167:-1:exon

H0I88_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gap
locus tag: H0I88_RS01005
old locus tag: TGRD_145
old locus tag: TGRD_147
old locus tag: TGRD_RS00990
inference: COORDINATES: protein motif:HMM:TIGR01534.1
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glyceraldehyde-3-phosphate dehydrogenase
translation: MAIKVGINGFGRIGRLVFRAAQNISDIKVVAVNDLIDVEYMAYMLKYDSVHGTFKGTVEVKNGNLIVNGNTIRVTAEKNPADLKWSDAEAEYVVESTGLFLSKDKALAHINAGAKYVVMSAPSKDDTPMFVCGVNLDSYKKGTQFVSNASCTTNCLAPIAKVLNDKFSILDGLMTTVHATTATQKTVDGPSAKDWRGGRATSGNIIPSSTGAAKAVGKVIPQLNGKLTGMSFRIPTLDVSVVDLTVNLAKPASYDEIKAAMKSASENELKGILGYTEDEVVSSDFVGDARTSIFDAKAGIALTNKFVKVVSWYDNEWGYSNKILDLISYMKKVNG
SIO_010081: H0I88_RS01005
subclass of: SO_0000673
so part of: H0I88_RS01005
location: complement(223160..224167)
location: region:223160-224167:-1
so has part: feature:223160-224167:-1:exon

WP_015423159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223160-224167:-1:exon

H0I88_RS06365
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06365
so part of: sequence
location: 225173..225301
location: region:225173-225301:1
so has part: feature:225173-225301:1:exon
subclass of: SO_0000010

position:225173:1
position: 225173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225301:1
position: 225301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225173-225301:1:exon

H0I88_RS06365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKILSLCVVVAVFVLTFVSCSKAVKVIDAEKKVEAPITPQV
SIO_010081: H0I88_RS06365
subclass of: SO_0000673
so part of: H0I88_RS06365
location: 225173..225301
location: region:225173-225301:1
so has part: feature:225173-225301:1:exon

WP_269763546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225173-225301:1:exon

H0I88_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01015
old locus tag: TGRD_RS05830
so part of: sequence
location: 225374..225523
location: region:225374-225523:1
so has part: feature:225374-225523:1:exon
subclass of: SO_0000010

position:225374:1
position: 225374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225523:1
position: 225523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225374-225523:1:exon

H0I88_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01015
old locus tag: TGRD_RS05830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKMFRVILMLCFCLTYVFCGKKDTAVILPTAVSESVPEKATVPLQNSQ
SIO_010081: H0I88_RS01015
subclass of: SO_0000673
so part of: H0I88_RS01015
location: 225374..225523
location: region:225374-225523:1
so has part: feature:225374-225523:1:exon

WP_158302766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225374-225523:1:exon

H0I88_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01020
old locus tag: TGRD_RS05835
so part of: sequence
location: 225741..225908
location: region:225741-225908:1
so has part: feature:225741-225908:1:exon
subclass of: SO_0000010

position:225741:1
position: 225741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225908:1
position: 225908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225741-225908:1:exon

H0I88_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01020
old locus tag: TGRD_RS05835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYCASEAMRETNDPLRCSMLYKSTMQKLLKKHLNDQNFEWEVVEGSIRDWHDYV
SIO_010081: H0I88_RS01020
subclass of: SO_0000673
so part of: H0I88_RS01020
location: 225741..225908
location: region:225741-225908:1
so has part: feature:225741-225908:1:exon

WP_158302767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225741-225908:1:exon

H0I88_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01025
old locus tag: TGRD_RS05840
so part of: sequence
location: 225920..226063
location: region:225920-226063:1
so has part: feature:225920-226063:1:exon
subclass of: SO_0000010

position:225920:1
position: 225920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226063:1
position: 226063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225920-226063:1:exon

H0I88_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01025
old locus tag: TGRD_RS05840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVLTALVVSVFVLSFVSCKKVSKVIDDKAGATTGADAKAPTPPQA
SIO_010081: H0I88_RS01025
subclass of: SO_0000673
so part of: H0I88_RS01025
location: 225920..226063
location: region:225920-226063:1
so has part: feature:225920-226063:1:exon

WP_158302768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225920-226063:1:exon

H0I88_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01030
old locus tag: TGRD_146
old locus tag: TGRD_148
old locus tag: TGRD_RS01000
so part of: sequence
location: 226110..226424
location: region:226110-226424:1
so has part: feature:226110-226424:1:exon
subclass of: SO_0000010

position:226110:1
position: 226110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226424:1
position: 226424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226110-226424:1:exon

H0I88_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01030
old locus tag: TGRD_146
old locus tag: TGRD_148
old locus tag: TGRD_RS01000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHTSMISNPTPTAGTNVVLKGEVKAVDPALPTIPSEGDNLPSEGNYTRADGEFLDKGNYWLWGVTVCSTIVVFLLIYHRKTIMDFLMLRTRIKRKGFNWISKR
SIO_010081: H0I88_RS01030
subclass of: SO_0000673
so part of: H0I88_RS01030
location: 226110..226424
location: region:226110-226424:1
so has part: feature:226110-226424:1:exon

WP_125266974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226110-226424:1:exon

H0I88_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01035
old locus tag: TGRD_RS01005
so part of: sequence
location: 227171..227449
location: region:227171-227449:1
so has part: feature:227171-227449:1:exon
subclass of: SO_0000010

position:227171:1
position: 227171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227449:1
position: 227449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227171-227449:1:exon

H0I88_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01035
old locus tag: TGRD_RS01005
inference: COORDINATES: protein motif:HMM:NF019872.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFVANSENIKNIRKFGFLKSKRLIVGVASGRDIWKTNFTKASSFLITELFELTGQEEPTIHLFIICVLLNPEKIYLNADLTQLLSFADEQC
SIO_010081: H0I88_RS01035
subclass of: SO_0000673
so part of: H0I88_RS01035
location: 227171..227449
location: region:227171-227449:1
so has part: feature:227171-227449:1:exon

WP_095558672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227171-227449:1:exon

H0I88_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01040
old locus tag: TGRD_RS01010
so part of: sequence
location: 227446..227655
location: region:227446-227655:1
so has part: feature:227446-227655:1:exon
subclass of: SO_0000010

position:227446:1
position: 227446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227655:1
position: 227655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227446-227655:1:exon

H0I88_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01040
old locus tag: TGRD_RS01010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQIINEKQNVPKQDFEEIGGVFKNEKVQKVVVVVKKDSIGRKESFEQRCARQKETLKLPLFPITTIGS
SIO_010081: H0I88_RS01040
subclass of: SO_0000673
so part of: H0I88_RS01040
location: 227446..227655
location: region:227446-227655:1
so has part: feature:227446-227655:1:exon

WP_095558673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227446-227655:1:exon

H0I88_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01055
old locus tag: TGRD_147
old locus tag: TGRD_149
old locus tag: TGRD_RS01025
so part of: sequence
location: complement(228180..228389)
location: region:228180-228389:-1
so has part: feature:228180-228389:-1:exon
subclass of: SO_0000010

position:228180:-1
position: 228180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228389:-1
position: 228389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228180-228389:-1:exon

H0I88_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01055
old locus tag: TGRD_147
old locus tag: TGRD_149
old locus tag: TGRD_RS01025
inference: COORDINATES: protein motif:HMM:NF024143.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YtxH domain-containing protein
translation: MSDNRDTLLAFVLGGLIGATLGILYAPKSGRETRSNIKKFGEEIVDTVSNLSDDFKDDESQFKVSSKIK
SIO_010081: H0I88_RS01055
subclass of: SO_0000673
so part of: H0I88_RS01055
location: complement(228180..228389)
location: region:228180-228389:-1
so has part: feature:228180-228389:-1:exon

WP_015423161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228180-228389:-1:exon

H0I88_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01060
old locus tag: TGRD_148
old locus tag: TGRD_RS01030
so part of: sequence
location: complement(228391..228681)
location: region:228391-228681:-1
so has part: feature:228391-228681:-1:exon
subclass of: SO_0000010

position:228391:-1
position: 228391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228681:-1
position: 228681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228391-228681:-1:exon

H0I88_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01060
old locus tag: TGRD_148
old locus tag: TGRD_RS01030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF948 domain-containing protein
translation: MNSIGLVFIIIGVILITLSVVAVTVFLILMLIGIKKSAIEFRRFIKKINSELDGVNKVSGVASMRRKLSSLVIKGISFLFYAFLSVSERKNRTHGE
SIO_010081: H0I88_RS01060
subclass of: SO_0000673
so part of: H0I88_RS01060
location: complement(228391..228681)
location: region:228391-228681:-1
so has part: feature:228391-228681:-1:exon

WP_095558677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228391-228681:-1:exon

H0I88_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01065
old locus tag: TGRD_149
old locus tag: TGRD_150
old locus tag: TGRD_RS01035
so part of: sequence
location: 229177..229845
location: region:229177-229845:1
so has part: feature:229177-229845:1:exon
subclass of: SO_0000010

position:229177:1
position: 229177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229845:1
position: 229845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229177-229845:1:exon

H0I88_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01065
old locus tag: TGRD_149
old locus tag: TGRD_150
old locus tag: TGRD_RS01035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQKIWKYGEVRKLCDCTSKGCFNYAAKYMLKQARINYRKTLVEAKGRVATAKKDKILIMCDKNGRLAPFRQYSKALGLGFNREFPASVVASADVFTNAATAGSVGLVDGWSTTFERPIFGILSALTNFAKIGICRVGTEIGRVSIPNYYLRVLHSSKAGQKILGELRRFYNLKDWFKKNPDVKGKEAVEKVRFNEALERNAEIVQKLNEDLMRKNNYDIND
SIO_010081: H0I88_RS01065
subclass of: SO_0000673
so part of: H0I88_RS01065
location: 229177..229845
location: region:229177-229845:1
so has part: feature:229177-229845:1:exon

WP_015423162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229177-229845:1:exon

H0I88_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01070
old locus tag: TGRD_150
old locus tag: TGRD_151
old locus tag: TGRD_RS01040
so part of: sequence
location: 230050..230295
location: region:230050-230295:1
so has part: feature:230050-230295:1:exon
subclass of: SO_0000010

position:230050:1
position: 230050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230295:1
position: 230295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230050-230295:1:exon

H0I88_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01070
old locus tag: TGRD_150
old locus tag: TGRD_151
old locus tag: TGRD_RS01040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKLAGAVESLNKDLVEANKVLAKSNVDLSNSVTRSTNAIRKLVDVQEKEAERKAKKEAEKKAKEEAKKNRSWYEKLVDLD
SIO_010081: H0I88_RS01070
subclass of: SO_0000673
so part of: H0I88_RS01070
location: 230050..230295
location: region:230050-230295:1
so has part: feature:230050-230295:1:exon

WP_232501226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230050-230295:1:exon

H0I88_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ychF
locus tag: H0I88_RS01075
old locus tag: TGRD_151
old locus tag: TGRD_152
old locus tag: TGRD_RS01045
so part of: sequence
location: 230672..231763
location: region:230672-231763:1
so has part: feature:230672-231763:1:exon
subclass of: SO_0000010

position:230672:1
position: 230672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231763:1
position: 231763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230672-231763:1:exon

H0I88_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: ychF
locus tag: H0I88_RS01075
old locus tag: TGRD_151
old locus tag: TGRD_152
old locus tag: TGRD_RS01045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MKLGIIGLPNVGKSTLFNAITEARSETANYPFCTIDPNVGVVNVPDKRLDFLEKLYNSKKKVHATAEFLDIAGLVKGASQGEGLGNQFLSHIRETAAVIHTVRCFESKDITHVMGGVDPFRDIEIIDTELILADIESVSKRLEKLEKTVRLNDKKILAERELAIKVKAHLDVGNPARTLKLSDNEKIIVKDFFLITAKPVLYVCNVAESDLPVMENKYIKIVKEKSEKENALVIPVCAKIEAELSELSEDDQKTFLKDLGLGYPGLNRLIRAGYDLLGLATFLTAGEDEVKAWTIKKGIPAPQAAGAIHSDFERGFIRAKVMSFDDLLRLGSEKAVKEAGLLRSEGKEYLVKDGDIIEFRFNV
SIO_010081: H0I88_RS01075
subclass of: SO_0000673
so part of: H0I88_RS01075
location: 230672..231763
location: region:230672-231763:1
so has part: feature:230672-231763:1:exon

WP_015423164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230672-231763:1:exon

H0I88_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01080
old locus tag: TGRD_152
old locus tag: TGRD_153
old locus tag: TGRD_RS01050
so part of: sequence
location: 232522..233577
location: region:232522-233577:1
so has part: feature:232522-233577:1:exon
subclass of: SO_0000010

position:232522:1
position: 232522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233577:1
position: 233577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232522-233577:1:exon

H0I88_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01080
old locus tag: TGRD_152
old locus tag: TGRD_153
old locus tag: TGRD_RS01050
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SurA N-terminal domain-containing protein
translation: MKKFFSVLAVTFFIVGVGSIFAAPKKVDQTLAIVNGKPIFESEVNKVFNNLKSDMLASEQWSEQKINELKNRILERQIDSILLKNEIKKQKILVSRKEVLEYIKELKKNHAIDEELSKQNLTYKDLEKSVSEIIRFMKLLGKILDVNAEKITEAEIKSFYDKVIIKMKGGNPGLSHDKDCLAASVADELKKVFSENVRIKQIFIKNPKGTQDAETQVVQSKVETVKKELQVKSFAEVARKYSEDLISKSRNGDLGIFVVKGDLPLVLEKAVFSMKVGDYTKEPIKTDIGYYFIKLEEKLPNRKIVFDGKVKDYINSRLLQFNNEQACIRYISTLRTKANIKINKVWQNNND
SIO_010081: H0I88_RS01080
subclass of: SO_0000673
so part of: H0I88_RS01080
location: 232522..233577
location: region:232522-233577:1
so has part: feature:232522-233577:1:exon

WP_015423165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232522-233577:1:exon

H0I88_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pdxA
locus tag: H0I88_RS01085
old locus tag: TGRD_153
old locus tag: TGRD_154
old locus tag: TGRD_RS01055
so part of: sequence
location: 233570..234526
location: region:233570-234526:1
so has part: feature:233570-234526:1:exon
subclass of: SO_0000010

position:233570:1
position: 233570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234526:1
position: 234526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233570-234526:1:exon

H0I88_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pdxA
locus tag: H0I88_RS01085
old locus tag: TGRD_153
old locus tag: TGRD_154
old locus tag: TGRD_RS01055
EC number: 1.1.1.262
inference: COORDINATES: protein motif:HMM:TIGR00557.1
GO function: GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA
translation: MTKPRLAITLGDPAGVGCEIVCRAVSSSAVKRVCSPVIFGDKQSLKRSLLKYLKNRMPFEFVESSNIGDSVKMGAPSKKAGIIAASAIYKAVKYCANGKALALVTAPVSKESLKMSGIKYPGHTELLASLTNSKKVAMMMTCGNIHGVMVTRHIPVSKISENIKTKTIVEAVNLSVNFLRKAGKKNIKVVLCGLNPHAGDNSILGFEEKKFILPAYKIIKKSGIDITKPLSADSAWLKTKNGQYDLICAMYHDQIMIALKCINAAKIVNVTIGLPFVRTSPGHGTAFNIAGKNEADASAMIEAILYAARWGKKSRMQS
SIO_010081: H0I88_RS01085
subclass of: SO_0000673
so part of: H0I88_RS01085
location: 233570..234526
location: region:233570-234526:1
so has part: feature:233570-234526:1:exon

WP_015423166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233570-234526:1:exon

H0I88_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01095
old locus tag: TGRD_155
old locus tag: TGRD_156
old locus tag: TGRD_RS01065
so part of: sequence
location: complement(234964..235518)
location: region:234964-235518:-1
so has part: feature:234964-235518:-1:exon
subclass of: SO_0000010

position:234964:-1
position: 234964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235518:-1
position: 235518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234964-235518:-1:exon

H0I88_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01095
old locus tag: TGRD_155
old locus tag: TGRD_156
old locus tag: TGRD_RS01065
inference: COORDINATES: protein motif:HMM:NF024605.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIIGLTGACCSGKDTIAEYISKKHGYKHYSLSEILRGIMKEKGIKLTRENLAVFGTELREENGNEILAKKALEKIDLGGRFCITSIRHTGEVEKLRERKDFILVNITAPQNIRFERMRNRKRYGDPQTFEKFTELEEKESQTKGHGQQLKKTADMADINFINYSNYMASLEITVEKLLKDIKNK
SIO_010081: H0I88_RS01095
subclass of: SO_0000673
so part of: H0I88_RS01095
location: complement(234964..235518)
location: region:234964-235518:-1
so has part: feature:234964-235518:-1:exon

WP_015423168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234964-235518:-1:exon

H0I88_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01100
old locus tag: TGRD_RS01070
so part of: sequence
location: complement(235780..236010)
location: region:235780-236010:-1
so has part: feature:235780-236010:-1:exon
subclass of: SO_0000010

position:235780:-1
position: 235780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236010:-1
position: 236010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235780-236010:-1:exon

H0I88_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01100
old locus tag: TGRD_RS01070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFIYYIENDVILFDFIIQNFGVKSKKKDLQSLNFKLGASRYLLDSFLISVEVMLFPYNNKIFPAVGVAICEWYKQ
SIO_010081: H0I88_RS01100
subclass of: SO_0000673
so part of: H0I88_RS01100
location: complement(235780..236010)
location: region:235780-236010:-1
so has part: feature:235780-236010:-1:exon

WP_096525375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235780-236010:-1:exon

H0I88_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01105
old locus tag: TGRD_156
old locus tag: TGRD_157
old locus tag: TGRD_RS01085
so part of: sequence
location: 236905..238569
location: region:236905-238569:1
so has part: feature:236905-238569:1:exon
subclass of: SO_0000010

position:236905:1
position: 236905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238569:1
position: 238569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236905-238569:1:exon

H0I88_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01105
old locus tag: TGRD_156
old locus tag: TGRD_157
old locus tag: TGRD_RS01085
inference: COORDINATES: protein motif:HMM:NF013871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MCKTRYFYPLTEPVRFLDSGRIEVEYTAKIKTEKLRKLISSFTGYPVQLKNSADNMEDIIISYPAPVQRKKKLRQLLTTQIFILSLYVIMSVDMEDIVIPQRYKSIIDKISITAVENSFDVYIVGGFVRDLFIKREPKDLDIMVCGRGSNLSMQSAGINFSKILAKKYKLDKPVIFERFGTSKLFMDSEEVEFVMPRREYYNANSRNPDTQIASVEQDALRRDFTINALFLRLNDMKILDFTSQGVVDIKNKIIRVTDPSNIEIIFKQDPLRILRAVRQSVQLDFKIETETYNAMKISSPSIEIVSPERIRDEINKILIEKIPSKAFKIMDEINLSVKILPEVARLKNLEQLEKYHTDDVFVHTLKVLDRTKNDIILRMAALLHDTGKYATCKKNGGRICFYGHDAESAKEAEAVLKRLKYSKEFIQKTVSVIKNHMYPKMYSDDWTDGAVRRFVKRCSGELDLIMEISRADYGKDSNDVKLVKLKKRIEDLKLKNMLYPKPELLTGREMMRIFNRLSGKWIRKAKSKIEEMRFENPGITKEEAIEIIREMFRK
SIO_010081: H0I88_RS01105
subclass of: SO_0000673
so part of: H0I88_RS01105
location: 236905..238569
location: region:236905-238569:1
so has part: feature:236905-238569:1:exon

WP_095558681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236905-238569:1:exon

H0I88_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01110
old locus tag: TGRD_RS01090
so part of: sequence
location: 238968..239198
location: region:238968-239198:1
so has part: feature:238968-239198:1:exon
subclass of: SO_0000010

position:238968:1
position: 238968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239198:1
position: 239198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238968-239198:1:exon

H0I88_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01110
old locus tag: TGRD_RS01090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFLTFEKEEKLEIVEKKGWDLAKILYVLGCGRGMINSCVRELEGRTDDELVQALKDVVATIQKAQDFLRAKKMDD
SIO_010081: H0I88_RS01110
subclass of: SO_0000673
so part of: H0I88_RS01110
location: 238968..239198
location: region:238968-239198:1
so has part: feature:238968-239198:1:exon

WP_095558682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238968-239198:1:exon

H0I88_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01115
old locus tag: TGRD_157
old locus tag: TGRD_158
old locus tag: TGRD_RS01095
so part of: sequence
location: 239643..240734
location: region:239643-240734:1
so has part: feature:239643-240734:1:exon
subclass of: SO_0000010

position:239643:1
position: 239643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240734:1
position: 240734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239643-240734:1:exon

H0I88_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01115
old locus tag: TGRD_157
old locus tag: TGRD_158
old locus tag: TGRD_RS01095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine amidotransferase family protein
translation: MLKEGELRIPSGCAISGIIDKEGKRFNGDEIIKSIALMHDRSNGLGGGFAAYGIYPQYKDFYALHIFYDNLSIKMQTEDFISKYFDIESAGNIPTKSVLGVRNKPLIWRYFVHPRNYMVKDGFVDEAEFTSRYVIKINKEYKGAYVFSSGKNMGTFKGVGYPEDIGKFFMLDTYEGYMWMAHGRFPTNTPGWWGGAHPFTMLDWSVIHNGEISSYDANRRFVEMYGYKCTLQTDTEVITYLFDMLVRKHNIPMEKAIKVVAAPFWEDIERENKEVQNELKSIRSVYASALINGPFSIILGFEKGMIVLNDRIKLRSLVAAEKGSRTYVASEESAIRIICDNPHKIWSPQGGEPIIALLKGEQK
SIO_010081: H0I88_RS01115
subclass of: SO_0000673
so part of: H0I88_RS01115
location: 239643..240734
location: region:239643-240734:1
so has part: feature:239643-240734:1:exon

WP_015423170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239643-240734:1:exon

H0I88_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01120
old locus tag: TGRD_158
old locus tag: TGRD_159
old locus tag: TGRD_RS01100
so part of: sequence
location: 240731..242236
location: region:240731-242236:1
so has part: feature:240731-242236:1:exon
subclass of: SO_0000010

position:240731:1
position: 240731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242236:1
position: 242236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240731-242236:1:exon

H0I88_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01120
old locus tag: TGRD_158
old locus tag: TGRD_159
old locus tag: TGRD_RS01100
inference: COORDINATES: protein motif:HMM:NF013784.2
GO function: GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase-related protein
translation: MSLDFNSPVFEVIRDEKKCIQCQVCARQCSNKVHLYDEEDNVVRADDIKCVNCHRCVVLCPTKALVIKKYPLEFKENVNWTDAALKEIYKQSQTGGVLLSSMGNPKSFPIYWDRMLLNASQVTNPSIDPLREPMETKVMIGRKPEKLEFDAKGKLVTNVPPQIELSIPIMFSAMSYGSISRNAHESLARAATELGICYNTGEGGLNRDFYKYGKNTIVQVASGRFGVHKEYLNAGAAIEIKIGQGAKPGIGGHLPGKKVGEDVSATRMIPVGSDAISPAPHHDIYSIEDLRQLIFSLKEVTAYKKPVFVKIAAVHNSAAIASGIVRAGADAIVVDGFRGGTGAAPTRVRDNVGIPIELALAAIDQRLREEEIRNEVSLIIAGSIRNSADVVKAVALGADAVYIGSAAVIALGCHLCRSCSTGKCNWGIATQEPELVKRLNPDIMYKRLVNLASAWNHEIQELLGGMGINAIDSLRGNRLMLRGIDLNEKELEILGIKYAGE
SIO_010081: H0I88_RS01120
subclass of: SO_0000673
so part of: H0I88_RS01120
location: 240731..242236
location: region:240731-242236:1
so has part: feature:240731-242236:1:exon

WP_015423171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240731-242236:1:exon

H0I88_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01125
old locus tag: TGRD_159
old locus tag: TGRD_160
old locus tag: TGRD_RS01105
so part of: sequence
location: 242369..242836
location: region:242369-242836:1
so has part: feature:242369-242836:1:exon
subclass of: SO_0000010

position:242369:1
position: 242369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242836:1
position: 242836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242369-242836:1:exon

H0I88_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01125
old locus tag: TGRD_159
old locus tag: TGRD_160
old locus tag: TGRD_RS01105
inference: COORDINATES: protein motif:HMM:NF024644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MKKIYAFERECLGCRLCEVYCKTAHSKSKDIIKAHKQENITSAIIIEEILQPKAVSYFALQCRHCASPKCVKACISGAMYRDEKGIVHNDKKRCVSCMSCVLVCPFGAVKKSNDGKAVSKCDLCVDYGNGKSLCVENCPNNAIKLLNEDEAEALK
SIO_010081: H0I88_RS01125
subclass of: SO_0000673
so part of: H0I88_RS01125
location: 242369..242836
location: region:242369-242836:1
so has part: feature:242369-242836:1:exon

WP_015423172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242369-242836:1:exon

H0I88_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01130
old locus tag: TGRD_160
old locus tag: TGRD_161
old locus tag: TGRD_RS01110
so part of: sequence
location: 242833..244104
location: region:242833-244104:1
so has part: feature:242833-244104:1:exon
subclass of: SO_0000010

position:242833:1
position: 242833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244104:1
position: 244104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242833-244104:1:exon

H0I88_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01130
old locus tag: TGRD_160
old locus tag: TGRD_161
old locus tag: TGRD_RS01110
inference: COORDINATES: protein motif:HMM:NF019604.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MKYLIIGNSAAGVNAADGIRANDKKGSITIISNEEFGAYGRPLISYYLSGKVRSESMYYRSEDFYKSRNIEVLLNTEAEEIDVKKKEVFTAGGKKLSYDKLLIATGSSPFIPLVKNLDLSKQENVFTFLTYKDSIKLKKQIIGKSKVVIAGAGLIGLKAAEGLFGQVSSITVIDLADRVMASVLDKTSADIIQGHIEQNDIDFKFQTSICEVHGGERNVNKVVLSNGETLDCDILIIAVGVRPNINLAKKAGIKTAKGIIVDEYMRTSVKDIYAAGDCVESVDMLSNESKILALWTNASSQGETAGFNMTGTEIKAPAAFAMNAISFFGLQLISAGVIGTSKSNEIVTDSAENKLRRLNISNDKLVGFVLINYNQRAGIYTALISDRTKLSTLEYDITSKDIGLDVYPKEERTKKIWNHKGGC
SIO_010081: H0I88_RS01130
subclass of: SO_0000673
so part of: H0I88_RS01130
location: 242833..244104
location: region:242833-244104:1
so has part: feature:242833-244104:1:exon

WP_015423173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242833-244104:1:exon

H0I88_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01135
old locus tag: TGRD_161
old locus tag: TGRD_162
old locus tag: TGRD_RS01115
so part of: sequence
location: 244160..244897
location: region:244160-244897:1
so has part: feature:244160-244897:1:exon
subclass of: SO_0000010

position:244160:1
position: 244160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244897:1
position: 244897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244160-244897:1:exon

H0I88_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01135
old locus tag: TGRD_161
old locus tag: TGRD_162
old locus tag: TGRD_RS01115
inference: COORDINATES: protein motif:HMM:NF013645.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTINALNVYYRDLNASIDETVKVDKSITLRNVFGQRYIGRGLPEKVKLKIYGTPGNDMAAYMDGAELEIFGNGQDAVGNTMNYGRIIVHGSCGDTLGYAMRGGEIYIEGNVGYRVGIHMKEYKEMKPIIVAGGKAGEFLGEYMAGGAIILLGLNLSKDEYITGKFCGTGMHGGVIYLNGSGGKCKFGKEAVKVDINGEDILFLKKHISFYAKTFKKDLSRLKLESFSKYAAINKNPYSNMYCTY
SIO_010081: H0I88_RS01135
subclass of: SO_0000673
so part of: H0I88_RS01135
location: 244160..244897
location: region:244160-244897:1
so has part: feature:244160-244897:1:exon

WP_015423174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244160-244897:1:exon

H0I88_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: carA
locus tag: H0I88_RS01140
old locus tag: TGRD_162
old locus tag: TGRD_163
old locus tag: TGRD_RS01120
so part of: sequence
location: 245146..246288
location: region:245146-246288:1
so has part: feature:245146-246288:1:exon
subclass of: SO_0000010

position:245146:1
position: 245146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246288:1
position: 246288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245146-246288:1:exon

H0I88_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: carA
locus tag: H0I88_RS01140
old locus tag: TGRD_162
old locus tag: TGRD_163
old locus tag: TGRD_RS01120
EC number: 6.3.5.5
inference: COORDINATES: protein motif:HMM:NF009475.0
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MEQTKKILGKKYKKACLELSNGVKLKGNAIGADVIVSGEMVFNTGMLGYSEAMTDPSYLGQILVFSFCLIGNYGIPDLKIGDFFMSKGHESSSIKTQGIIVSGIYDGCHHHDGGVSLEDWMKSQGVPGISGIDTRYLVQMIRESRNLSGRIIPEGAKLQDKNKFEFLKNFRDDEYVDPSKYNLMPSVSTKEKVIMNKASKKVAVVDCGAKWNIMRMLVGRNCGVELLPWDSDFSKVKCDGWIISNGPGDPKNTGDLVERIKKDVLSSDKPILGICLGHQLLSLASGAKTKRLNHGHRSHNQPVFSFPEKNAYMSSQNHRYAVEKNSIQPDWMLWFENANDGSVEGLKHETKPFMSVQFHPEASSGPNDTSWIMDKFVGLL
SIO_010081: H0I88_RS01140
subclass of: SO_0000673
so part of: H0I88_RS01140
location: 245146..246288
location: region:245146-246288:1
so has part: feature:245146-246288:1:exon

WP_015423175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245146-246288:1:exon

H0I88_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01145
old locus tag: TGRD_163
old locus tag: TGRD_164
old locus tag: TGRD_RS01125
so part of: sequence
location: 246492..247547
location: region:246492-247547:1
so has part: feature:246492-247547:1:exon
subclass of: SO_0000010

position:246492:1
position: 246492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247547:1
position: 247547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246492-247547:1:exon

H0I88_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01145
old locus tag: TGRD_163
old locus tag: TGRD_164
old locus tag: TGRD_RS01125
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SurA N-terminal domain-containing protein
translation: MKKFFSVLAVTFFIVGVGSIFAAPKKVDQTLAIVNGKPIFESEVNKVFNNLKSDMLASEQWSEQKINELKNRILERQIDSILLKNEIKKQKILVSRKEVLEYIKELKKNHAIDEELSKQNLTYKDLEKSVSEIIRFMKLLGKILDVNAEKITEAEIKSFYDKVIIKMKGGNPGLSHDKDCLAASVADELKKVFSENVRIKQIFIKNPKGTQDAETQVVQSKVETVKKELQVKSFAEVARKYSEDLISKSRNGDLGIFVVKGDLPLVLEKAVFSMKVGDYTKEPIKTDIGYYFIKLEEKLPNRKIVFDGKVKDYINSRLLQFNNEQACIRYISTLRTKANIKINKVWQNNND
SIO_010081: H0I88_RS01145
subclass of: SO_0000673
so part of: H0I88_RS01145
location: 246492..247547
location: region:246492-247547:1
so has part: feature:246492-247547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246492-247547:1:exon

H0I88_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01150
old locus tag: TGRD_RS01130
so part of: sequence
location: 248058..248666
location: region:248058-248666:1
so has part: feature:248058-248666:1:exon
subclass of: SO_0000010

position:248058:1
position: 248058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248666:1
position: 248666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248058-248666:1:exon

H0I88_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01150
old locus tag: TGRD_RS01130
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKIYVEKIIIKNRAPFDNLSLDFKENEIAALTAVNGNGKTTLLSYIADAWYEMAKSFFQNEFEGKQNKYYRFSSNAFNIDKNQPSFVYIRFKTKTYEDQCKYYIDYVDIREKCTQDQYNKAIQLEEKISFDKIQNYISQDYCVKHVSLNFNKDKAEKIFKDNVITYFPSYRYESPGYLNDPYEVNLEFKKKESIFRIFEKSN
SIO_010081: H0I88_RS01150
subclass of: SO_0000673
so part of: H0I88_RS01150
location: 248058..248666
location: region:248058-248666:1
so has part: feature:248058-248666:1:exon

WP_095558683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248058-248666:1:exon

H0I88_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01155
old locus tag: TGRD_RS01135
so part of: sequence
location: 248650..249978
location: region:248650-249978:1
so has part: feature:248650-249978:1:exon
subclass of: SO_0000010

position:248650:1
position: 248650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249978:1
position: 249978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248650-249978:1:exon

H0I88_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01155
old locus tag: TGRD_RS01135
inference: COORDINATES: protein motif:HMM:NF024700.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRNPIEVRTCLLQLANWVMDIVLDLKVTEAKQEAVLLENINNIFTQTLVSKQLGAVRVGIGQRSFGSTRIQIVKKETGQTVYPTIFNLSSGEAAMFCLFGEILRQADNNKNNILLEGITGIVLVDEVDKHLHIKLQKEILPKLLDIFPNVQFILSSHSPFLNMGLATVAKERVKIVDLNNFGVSTDPTANELYDEVYKMMISENDKFKKAYDSLKETIKSGKKPLIITEGKTDMMYLEKAKEKLEIEDCDIDFFDFGQEKSFGNKELEKLLGYISKIRLERKIIGIFDRDDDVIKRIEEGKKEYISCLNNVYAFCIPLVNKDIYETDYISMEHYFIKKDLCKKDKEGRRLFLGSEFFDSGKSKCENESFEVEMEKGKLKNKIGKNGVIDSAVYLSSDREYKNSIALSKADFAELVANNNEFAGEFDFSNFESIFKKIKQIIE
SIO_010081: H0I88_RS01155
subclass of: SO_0000673
so part of: H0I88_RS01155
location: 248650..249978
location: region:248650-249978:1
so has part: feature:248650-249978:1:exon

WP_158302769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248650-249978:1:exon

H0I88_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: carB
locus tag: H0I88_RS01160
old locus tag: TGRD_164
old locus tag: TGRD_165
old locus tag: TGRD_RS01140
so part of: sequence
location: 250000..253311
location: region:250000-253311:1
so has part: feature:250000-253311:1:exon
subclass of: SO_0000010

position:250000:1
position: 250000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253311:1
position: 253311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250000-253311:1:exon

H0I88_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: carB
locus tag: H0I88_RS01160
old locus tag: TGRD_164
old locus tag: TGRD_165
old locus tag: TGRD_RS01140
EC number: 6.3.5.5
inference: COORDINATES: protein motif:HMM:NF003671.0
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
translation: MPILDFLLPKNEKKQKVILLGSGALSIGQAGEFDYSGSQAVEALEEEGLEVIVINPNIASVQTNKAANKRVYLYPVTPFWVEKIIKIEKPAAIISSFGGQTSLNCVIELEKSGILKKYNVKVLGTQVNALEMSEDRELFAQKMKSIDAPVAKSHAVSTVKEALETAEQIGYPVITRSAFALGGLGSGLAATDAELKKLTQSALMSSPQVLIEKSLHGWKEIEYEVMRDKTGNTITICNMENFDPMGIHTGDSIVIAPCQTINNIENNMLRDMAIKIAQNVGIVGECNVQYALNPKDYGFYVIEINARLSRSSALASKATGYPIAYIAAKIVIGFDLLELKNPVTGTTSAFYEPSLDYVTLKVPRWDLSKFSGVSKNLGTQMKSVGEVMAIGRNFCEVIQKALRMVNENEDGITVNFFKDASDEDIEKELLSPTNLRVFAIYETFKRGKSLEYVYEKTKIDYWFLSHILYLAKIEKELLNFFKPNVKKDSVTVQELYDAYKQIPKDFLQHLKSRGFSDFQLVKIYLLACLNSKIKLSIKEIRNLSFAVRKLRKKLGILPVVKQIDTTSSEYPTKSNYLYLTYDGIHSDVSSKKNEKSIITLGSGSYRIGSSLEFDWCSVMTSSYFKNKKNDSVIINCNPETVSTDYNASDRLYFEELSFERVLDIIDIEDPKGVIACMGGQNPNNLIQPLSEAKVNILGHSQKSVAAAEDREKFSATLDKLGIDQPEWISAVSIADIDKFIKKIGFPVLIRPSFVLSGTLMNVATDKKSLDYYLSLTRDISFDFPVVISKFILDAKEIECDGVAKNGDVILSIVSEHIENAGVHSGDATMVFPARKIYVRTVNIIKDIVRKIAKGLNLNGPFNIQFIAKDNDVKVIECNARASRSFPFISKVSGVNLAEISCKVMNNERVKKILIDESEIPYVGVKASMFSFQRLDGADPVVGVEMSSTGEVGCLGEKFNHAMLLSMEATRIIKPQKGVLLSTGREKDKVKFMEVVDNLYKLGIPVYATKGSARYLEGRGYSVNTVHWNRSSRAVDVIIDGKVDFVININKNLSVDEINNNSEIRKTAVKFGCSILTNLEKAIAYLRAYDSYDELQNIENCIGL
SIO_010081: H0I88_RS01160
subclass of: SO_0000673
so part of: H0I88_RS01160
location: 250000..253311
location: region:250000-253311:1
so has part: feature:250000-253311:1:exon

WP_015423176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250000-253311:1:exon

H0I88_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsO
locus tag: H0I88_RS01165
old locus tag: TGRD_165
old locus tag: TGRD_166
old locus tag: TGRD_RS01145
so part of: sequence
location: 253496..253756
location: region:253496-253756:1
so has part: feature:253496-253756:1:exon
subclass of: SO_0000010

position:253496:1
position: 253496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253756:1
position: 253756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253496-253756:1:exon

H0I88_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsO
locus tag: H0I88_RS01165
old locus tag: TGRD_165
old locus tag: TGRD_166
old locus tag: TGRD_RS01145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290650.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MTFEKKTVVDQFKVHATDTGSSEVQIAILTTRIKYLSDHFKKFPKDFASRVGFLKMIGQRRQLLDYLKKYNKDSYSSLIKRLYLRK
SIO_010081: H0I88_RS01165
subclass of: SO_0000673
so part of: H0I88_RS01165
location: 253496..253756
location: region:253496-253756:1
so has part: feature:253496-253756:1:exon

WP_015423177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253496-253756:1:exon

H0I88_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pnp
locus tag: H0I88_RS01170
old locus tag: TGRD_166
old locus tag: TGRD_167
old locus tag: TGRD_RS01150
so part of: sequence
location: 253871..255940
location: region:253871-255940:1
so has part: feature:253871-255940:1:exon
subclass of: SO_0000010

position:253871:1
position: 253871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255940:1
position: 255940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253871-255940:1:exon

H0I88_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pnp
locus tag: H0I88_RS01170
old locus tag: TGRD_166
old locus tag: TGRD_167
old locus tag: TGRD_RS01150
EC number: 2.7.7.8
inference: COORDINATES: protein motif:HMM:NF008805.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MEYFKKEVDVAGKKFIVESGKVAKQAGGSCTVRIGETVVLVTVVSLKEPKVGIDFMPLTVDYRERTYAAGKIPGGFFKRETRPRDGEVLVSRLIDRSIRPLFPEYYRNDTQISAVVLSHDGENDSEMAAILGASIALYTSDLPFTTPIASVRIGKINGQLIINPLIAEQKLSDLDLVVSGTEEALTMVEAGARELSEAEMLEALNLAGKTLKGICLFQKTLPAKTKIVVEQPQHNSLLKADIEAEAVSKAEMSVVIKEKCEREFFWDSFKKDISSRLLEKYPEELPSTIDAILEDIFYQKARDLVLNKKIRTDGRGFEEIRPITCETGVLPRVHGSSLFTRGQTQALVTVTLGSPCDMQVIDELIVEYKERFMLHYNFPGFATGEPKRDRAVSRREIGHGNLAKKALKHIMPDGEDFGYAVRIVSDILESNGSSSMASVCGGSLALFNAGVPVKSSCAGVSMGLMKEGGSYVILTDITGMEDHLGDMDFKVAGTRKGITALQMDIKILGLTTEIVAQALEQAKRGRFFILDQMDAVVSAPKNDLSNYAPRMITLTIPQNKIGELIGPGGKNIRKIQEDNNVKIDIEETGRVFISGVESDGVKSAKEYVECLTVEAEVGKIYKSRVTKIMAFGAFAEILPGKEGLIHISQLSNRHTKRVEDVVKEGDEVKVKVIEIDKQGRINLSIKAAL
SIO_010081: H0I88_RS01170
subclass of: SO_0000673
so part of: H0I88_RS01170
location: 253871..255940
location: region:253871-255940:1
so has part: feature:253871-255940:1:exon

WP_015423178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253871-255940:1:exon

H0I88_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01175
old locus tag: TGRD_167
old locus tag: TGRD_168
old locus tag: TGRD_RS01155
so part of: sequence
location: 256050..256472
location: region:256050-256472:1
so has part: feature:256050-256472:1:exon
subclass of: SO_0000010

position:256050:1
position: 256050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256472:1
position: 256472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256050-256472:1:exon

H0I88_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01175
old locus tag: TGRD_167
old locus tag: TGRD_168
old locus tag: TGRD_RS01155
inference: COORDINATES: protein motif:HMM:NF012584.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin/lipoyl-containing protein
translation: MVNDIKDEVRSLYEIMKEEKVQELEINSRNYSICIKRKDHDENNQTVQKKQIIVQEEPMVSGETIKTPIAGVFYRSPSPSSPVFVNEGDIVNIGKTVCIIEAMKVMNEIKATFKAKILKMLAENGKPVNSGQDLFEVEKV
SIO_010081: H0I88_RS01175
subclass of: SO_0000673
so part of: H0I88_RS01175
location: 256050..256472
location: region:256050-256472:1
so has part: feature:256050-256472:1:exon

WP_015423179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256050-256472:1:exon

H0I88_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01180
old locus tag: TGRD_168
old locus tag: TGRD_169
old locus tag: TGRD_RS01160
so part of: sequence
location: 256681..258852
location: region:256681-258852:1
so has part: feature:256681-258852:1:exon
subclass of: SO_0000010

position:256681:1
position: 256681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258852:1
position: 258852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256681-258852:1:exon

H0I88_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01180
old locus tag: TGRD_168
old locus tag: TGRD_169
old locus tag: TGRD_RS01160
inference: COORDINATES: protein motif:HMM:NF013727.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA translocase FtsK
translation: MRKNKKTKNKKQDSLKRNREAAALFFALASFLSAYVFIVRSRSGILGRAFFAVMFVVFGQAIYILPLIFLRYFIIHIMQSVELRKKLDFIWSVICIVSCSVLFKAVCLTFVPTTEIFSGGWIGDNLYPFFKELFGVWLGFAVIIAIFLFSVAKLFRISINNSLKNPEASITKVEEEKVQDIAQAKKQEYLILQKSDRAIPKPNILSRQEKEEKKKAESLICPTVKQTKVDSKIFDYKLPVAGLLKNDSAADFETSKDELLKRAELLRTTLADFDIDAKVKDIIPGPVVTRYDLILSPGIRIQTVSGIIDNISLAMRTASIRVVPIPEKAVVGIEVPNSSGIIVGLRGILESATFENSKSLLTLALGKTTDGSGYVTDLASMPHLLIAGATGSGKSVSIHTIILSILYKARPDEVKFMLIDPKRVEMPIYRDIPHIYNPCTCATNADIITGYREAAVALKKLVNVMDERYTKFAKAMARNIEDYNSKMVETGGEKEFYIVVIIDELADLMTAVQKEIEDSVQRLAQMARAVGIHLILATQRPSVNVVTGIIKANFPARLSFQTTSKIDSRVILDMLGAECLMGKGDMLFLPPGEARPARLQGAYVSLKEAEKVISFINEQNFPRLYEPVVAEVERTVGFNADKEKRTRDLIPALKLINERKRISQDLLKANFGGSARATNILSILETRGFITKPEGTNKWQIDYDKIRQYLEETERGACAERQS
SIO_010081: H0I88_RS01180
subclass of: SO_0000673
so part of: H0I88_RS01180
location: 256681..258852
location: region:256681-258852:1
so has part: feature:256681-258852:1:exon

WP_015423180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256681-258852:1:exon

H0I88_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01185
old locus tag: TGRD_RS01165
so part of: sequence
location: 258916..259131
location: region:258916-259131:1
so has part: feature:258916-259131:1:exon
subclass of: SO_0000010

position:258916:1
position: 258916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259131:1
position: 259131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258916-259131:1:exon

H0I88_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01185
old locus tag: TGRD_RS01165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAFIVLAVVAFAHSKDDNLNDILKKMEEAKKGIYTLKVYYTQSIFFESTKEKQEVSGTLLLRKPDSIYIN
SIO_010081: H0I88_RS01185
subclass of: SO_0000673
so part of: H0I88_RS01185
location: 258916..259131
location: region:258916-259131:1
so has part: feature:258916-259131:1:exon

WP_232501227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258916-259131:1:exon

H0I88_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01190
old locus tag: TGRD_RS01170
so part of: sequence
location: 259204..259386
location: region:259204-259386:1
so has part: feature:259204-259386:1:exon
subclass of: SO_0000010

position:259204:1
position: 259204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259386:1
position: 259386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259204-259386:1:exon

H0I88_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01190
old locus tag: TGRD_RS01170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVICSWKNFIDGDFALAVFINFGSSWREIKRTNIISLGGENEKYVVIKVNPIENKEKTGI
SIO_010081: H0I88_RS01190
subclass of: SO_0000673
so part of: H0I88_RS01190
location: 259204..259386
location: region:259204-259386:1
so has part: feature:259204-259386:1:exon

WP_125266975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259204-259386:1:exon

H0I88_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rimO
locus tag: H0I88_RS01200
old locus tag: TGRD_169
old locus tag: TGRD_170
old locus tag: TGRD_RS01185
so part of: sequence
location: 260247..261566
location: region:260247-261566:1
so has part: feature:260247-261566:1:exon
subclass of: SO_0000010

position:260247:1
position: 260247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261566:1
position: 261566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260247-261566:1:exon

H0I88_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rimO
locus tag: H0I88_RS01200
old locus tag: TGRD_169
old locus tag: TGRD_170
old locus tag: TGRD_RS01185
EC number: 2.8.4.4
inference: COORDINATES: protein motif:HMM:TIGR00089.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12 methylthiotransferase RimO
translation: MTDNIMQTIAVIALGCPKNTVEAEYLLGIFQEKGFKISSNLDKADIVVIHTCSFIKAAKAESEKCIRTILDIKKKKSLRVYVSGCLPQLLKEKMSVLFPDIDGFAGTGTLQYLPDLVFGKNFGRFILPPGGLNDSNYRVLSSTIPSAYLKIAEGCGHVCSFCIIPALRGRYESRTMESLVDEVAALAESGIKELILIAQDTTGYGKDIYGAFVLDKLLVKLSKINGLKWIRLLYAYPSSITDGLIEVFKEHKKICSYMDIPIQHASKNVLSAMKRPLNTPGIIEKIKRKLPDIVLRTSIIAGFPGETKKDVNELINFLNRGYFQYAGVFEYSDLKEAVSSKLKRHVRAAAAKERKIMIENAQYNIFQAKIDKIKNNTIEFLVESCLKKGNVYSIKGRSSFQSPEIDGNIILENDKPLTVGGFCKAKVRSVDGYNIKVYI
SIO_010081: H0I88_RS01200
subclass of: SO_0000673
so part of: H0I88_RS01200
location: 260247..261566
location: region:260247-261566:1
so has part: feature:260247-261566:1:exon

WP_015423181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260247-261566:1:exon

H0I88_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pgsA
locus tag: H0I88_RS01205
old locus tag: TGRD_170
old locus tag: TGRD_171
old locus tag: TGRD_RS01190
so part of: sequence
location: 261624..262247
location: region:261624-262247:1
so has part: feature:261624-262247:1:exon
subclass of: SO_0000010

position:261624:1
position: 261624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262247:1
position: 262247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261624-262247:1:exon

H0I88_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pgsA
locus tag: H0I88_RS01205
old locus tag: TGRD_170
old locus tag: TGRD_171
old locus tag: TGRD_RS01190
EC number: 2.7.8.5
inference: COORDINATES: protein motif:HMM:TIGR00560.1
GO function: GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
translation: MNLANRLTIARICMLPFFILFMELGGFYNSVLALAVFCTASITDMLDGQIARRSKTITSLGIFLDPIADKMLISAAFIYFVNIPMLGIAAWMVIIIIAREFIITGLRSIAAARNIMIPADKSGKCKTVSQIVVIIVIMVILIAREALFEFTGLTPDTLRLYDFGSYTALSLIMEKMPFWTTFVAIMLTVYSGVKYILRYRKLFSENG
SIO_010081: H0I88_RS01205
subclass of: SO_0000673
so part of: H0I88_RS01205
location: 261624..262247
location: region:261624-262247:1
so has part: feature:261624-262247:1:exon

WP_015423182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261624-262247:1:exon

H0I88_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01210
old locus tag: TGRD_171
old locus tag: TGRD_172
old locus tag: TGRD_RS01195
so part of: sequence
location: 262240..262689
location: region:262240-262689:1
so has part: feature:262240-262689:1:exon
subclass of: SO_0000010

position:262240:1
position: 262240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262689:1
position: 262689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262240-262689:1:exon

H0I88_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01210
old locus tag: TGRD_171
old locus tag: TGRD_172
old locus tag: TGRD_RS01195
inference: COORDINATES: protein motif:HMM:NF016489.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerophosphatase A
translation: MDKIVIFFSSVFGLGYIKSASGTFSSLAGILFWALFVPDIYIFQIFVLAAMFSISVLFSSLAEDIYNKKDDLRIVIDEVTGVWVSVAFLPKTFMFLFLGFLLFRIFDIGKPLFIREVQKVKGGLGITIDDVIAGIFTNIILQVLRFVAY
SIO_010081: H0I88_RS01210
subclass of: SO_0000673
so part of: H0I88_RS01210
location: 262240..262689
location: region:262240-262689:1
so has part: feature:262240-262689:1:exon

WP_015423183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262240-262689:1:exon

H0I88_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01215
old locus tag: TGRD_172
old locus tag: TGRD_173
old locus tag: TGRD_RS01200
so part of: sequence
location: complement(262721..263941)
location: region:262721-263941:-1
so has part: feature:262721-263941:-1:exon
subclass of: SO_0000010

position:262721:-1
position: 262721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263941:-1
position: 263941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262721-263941:-1:exon

H0I88_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01215
old locus tag: TGRD_172
old locus tag: TGRD_173
old locus tag: TGRD_RS01200
EC number: 3.4.24.-
inference: COORDINATES: protein motif:HMM:NF039309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MLIAKKNTSSTEYTAATDNHNPNIETVIIQHGDSFSLTLNNTRLPPKDSSDIIRELKKVLNINRCLPGDFYEIFYDSRTGEWTDFLYYPTGTSYCLITKSSDGVIKTEKKKFSTTITEHKAQGIINSSLWAAMKSQNIPLEIITSFTDIFSWHIDFLRKAKKDDVFKIVYEVENISKKNKKLSSRIIAAQYKTPLKTYNAFYFKPKNARSGYFDENGKSIKSAFLKAPLQFKRISSNFTTKRIHPILKCVKSHLATDYAAPFGTPVSTVGDGIVKKVKSNKQFGNLVVIKHPNNYETYYAHLSKYAKGIKEGVRVNQGEVIGYVGMTGFTTGAHLDFRIKHNNNFFDFCKIEQPTITLTSEDKKEFKEKIQNLLDIFDDRLQTTKHRMRLIIPLTTQSDTNQQQRN
SIO_010081: H0I88_RS01215
subclass of: SO_0000673
so part of: H0I88_RS01215
location: complement(262721..263941)
location: region:262721-263941:-1
so has part: feature:262721-263941:-1:exon

WP_232501228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262721-263941:-1:exon

H0I88_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01220
old locus tag: TGRD_173
old locus tag: TGRD_174
old locus tag: TGRD_RS01205
so part of: sequence
location: 264116..265336
location: region:264116-265336:1
so has part: feature:264116-265336:1:exon
subclass of: SO_0000010

position:264116:1
position: 264116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265336:1
position: 265336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264116-265336:1:exon

H0I88_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01220
old locus tag: TGRD_173
old locus tag: TGRD_174
old locus tag: TGRD_RS01205
inference: COORDINATES: protein motif:HMM:NF018004.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1015 domain-containing protein
translation: MAEIKAFQAIRYSKKFITDFICPPYDVIGSEEKKRLQELSPFNIVNIELSDPGDKNDKYKNAASLFNAWQNNGVLVRDKEPSLYFYEQIFEVCGIEMTRKGFFAALKLDEPYSEKGLVKPHEKTLARSNADRLRLLKATKANISPVFCLFEDEKLVVTDICRKIAKRVPSATVRDKKRTFHKLWVVSDEDIIKTVEEYLSDKKIFIADGHRRYETAWDYSQEIKEKNENYSPTKGYNYVLVYLCPIEDPGISIWPVHRVIKAPADLESKIEKYFDVHPAKNFHRLSKKEIQPMIIFKDGRYRVLTIKKEAFLKKAMPGKSKAYRDLAVNTLHYILMPKTDASEFAYVENDKEAVLLAQKTGRIAVIVPATTIKSLKTVSLNNEMLPQKSTYFYPKLASGIVIASLA
SIO_010081: H0I88_RS01220
subclass of: SO_0000673
so part of: H0I88_RS01220
location: 264116..265336
location: region:264116-265336:1
so has part: feature:264116-265336:1:exon

WP_015423185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264116-265336:1:exon

H0I88_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01225
old locus tag: TGRD_174
old locus tag: TGRD_175
old locus tag: TGRD_RS01210
so part of: sequence
location: 265358..265813
location: region:265358-265813:1
so has part: feature:265358-265813:1:exon
subclass of: SO_0000010

position:265358:1
position: 265358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265813:1
position: 265813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265358-265813:1:exon

H0I88_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01225
old locus tag: TGRD_174
old locus tag: TGRD_175
old locus tag: TGRD_RS01210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MAIDIFLTLTVVLAVWLGWFAGFTRTFFAFLAGFLAVFAASKYPHQKGLNFYLVFVITALLVIMSGGVTLRLISFFYLNILDRIGGAALGACIWLVVSVNIIIPAVFCGTYMSCGQSHIYKTVSHVMQFEVTVFKDYISQSLGRIMIECRK
SIO_010081: H0I88_RS01225
subclass of: SO_0000673
so part of: H0I88_RS01225
location: 265358..265813
location: region:265358-265813:1
so has part: feature:265358-265813:1:exon

WP_015423186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265358-265813:1:exon

H0I88_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: hisG
locus tag: H0I88_RS01230
old locus tag: TGRD_175
old locus tag: TGRD_176
old locus tag: TGRD_RS01215
so part of: sequence
location: 265836..266708
location: region:265836-266708:1
so has part: feature:265836-266708:1:exon
subclass of: SO_0000010

position:265836:1
position: 265836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266708:1
position: 266708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265836-266708:1:exon

H0I88_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: hisG
locus tag: H0I88_RS01230
old locus tag: TGRD_175
old locus tag: TGRD_176
old locus tag: TGRD_RS01215
EC number: 2.4.2.17
inference: COORDINATES: protein motif:HMM:TIGR00070.1
GO function: GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP phosphoribosyltransferase
translation: MKKLKLGFPKGSLQNATVELFKKAGTKISISSRSYYLISDDDELEIMLVRSQEMAKYVQDGFFDAGLTGFDWICESGAKVEEVCELNYAKSGFRSVRWVLAVTEDSKIKSIKDLEGKRVATELINYTKKYFAKNKIKADIEFSWGATEAKAGKLVDAIVELTETGSSLRANKLRVIDEMFSSTTRFIANDKALNDNWKKEKIENMAMLLKGALATEGMVGLKMNVPLKFLEKVIVVLPAHKKPTISQLSDREWIALDIIIEERTVKKIIPALKRSGAADIIEYPLNKIIY
SIO_010081: H0I88_RS01230
subclass of: SO_0000673
so part of: H0I88_RS01230
location: 265836..266708
location: region:265836-266708:1
so has part: feature:265836-266708:1:exon

WP_015423187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265836-266708:1:exon

H0I88_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rsmH
locus tag: H0I88_RS01235
old locus tag: TGRD_176
old locus tag: TGRD_177
old locus tag: TGRD_RS01220
so part of: sequence
location: 266842..267717
location: region:266842-267717:1
so has part: feature:266842-267717:1:exon
subclass of: SO_0000010

position:266842:1
position: 266842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267717:1
position: 267717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266842-267717:1:exon

H0I88_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rsmH
locus tag: H0I88_RS01235
old locus tag: TGRD_176
old locus tag: TGRD_177
old locus tag: TGRD_RS01220
EC number: 2.1.1.199
inference: COORDINATES: protein motif:HMM:TIGR00006.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MFHIPVMPLETSRYLIGKPGGLYVDCTFGGGGHALYLLDKFKDIKIVAFDWDEDSSKRFIEREKEFSGRVTFIRDNFKNVKKALSALNISKVDGILADIGVSSKQFGDLDRGFSFNSGTLDMRMDKRNGFEAKEVVNSYSYEDLADIFYKYGEERKSRQIASAILLRRKRGIINTASELQTVICSVKRPEGRINPATKVFQALRIFVNSELENLAVLLSDAPELLNAGGRTVIISFHSLEDRIVKQNFKRNSECGIYKILTKKVVTALKEEVKINPGSRSARIRAAEKTSV
SIO_010081: H0I88_RS01235
subclass of: SO_0000673
so part of: H0I88_RS01235
location: 266842..267717
location: region:266842-267717:1
so has part: feature:266842-267717:1:exon

WP_015423188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266842-267717:1:exon

H0I88_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01240
old locus tag: TGRD_177
old locus tag: TGRD_178
old locus tag: TGRD_RS01230
so part of: sequence
location: 268013..269755
location: region:268013-269755:1
so has part: feature:268013-269755:1:exon
subclass of: SO_0000010

position:268013:1
position: 268013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269755:1
position: 269755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268013-269755:1:exon

H0I88_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01240
old locus tag: TGRD_177
old locus tag: TGRD_178
old locus tag: TGRD_RS01230
inference: COORDINATES: protein motif:HMM:NF013100.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MLVLIILAVFFLLFAKLVYVQIFLHGKINEAVKRMVSRKNIKISKRGDILDSRGKILASSIEKYTVFLDPKIIEDFDKVKSILSENGIKVKEKSLNEFRKTSYVPVVFNIDADTVDRIKNEKLKGIGFESRYLRQYPEGRLLAHILGIIGSDGNGLEGIEKTCNESLSGDSIMTRAIRDGRGCIIQDEFIDKTRICGRNVKLNIDRTLQFIAEQELRRAFEKYKAKKAICIIQNPKTGKILAMVSLPDFNSSDKIKDLGILRNSAISDIYEPGSTFKIVAVAAALELGKVKFTDSFYLEDGKYKIAGHTIKDDHKIKGNASLSGIMEQSSNIGMIKIAQKLGSGNFYGYIRKFGFYSLTGVDLPGEARGLLKDVKNWNALSLPAISFGQGIGVTGLQMINAFSAIANDGVLMKPLVIENIGKADAATKAASTESAIAMHAMGTKEKPGNGMAEGVFEPKEIRRVVSIETARRVKKLLKSVVEFGTGRSAKISGYTVGGKTGTAQKVDPVLKTYSAKYYTVSFCGMVPAMEPEIVILVIIDEPKGSSYYAASVASPVFANIAKRVAEYLGIKKDDKNESSF
SIO_010081: H0I88_RS01240
subclass of: SO_0000673
so part of: H0I88_RS01240
location: 268013..269755
location: region:268013-269755:1
so has part: feature:268013-269755:1:exon

WP_158302770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268013-269755:1:exon

H0I88_RS06180
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06180
so part of: sequence
location: 270185..270334
location: region:270185-270334:1
so has part: feature:270185-270334:1:exon
subclass of: SO_0000010

position:270185:1
position: 270185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270334:1
position: 270334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270185-270334:1:exon

H0I88_RS06180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLALTGGLCTIEISRADVVGIRIIGNSEVLCIYKEKIKLKRMIILRLP
SIO_010081: H0I88_RS06180
subclass of: SO_0000673
so part of: H0I88_RS06180
location: 270185..270334
location: region:270185-270334:1
so has part: feature:270185-270334:1:exon

WP_232501229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270185-270334:1:exon

H0I88_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01245
old locus tag: TGRD_RS05845
so part of: sequence
location: 270873..271019
location: region:270873-271019:1
so has part: feature:270873-271019:1:exon
subclass of: SO_0000010

position:270873:1
position: 270873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271019:1
position: 271019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270873-271019:1:exon

H0I88_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01245
old locus tag: TGRD_RS05845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKKGRPVLSKNRVIMGVYINPVNLKNLKSEVKKNKVTTSAMLRGLS
SIO_010081: H0I88_RS01245
subclass of: SO_0000673
so part of: H0I88_RS01245
location: 270873..271019
location: region:270873-271019:1
so has part: feature:270873-271019:1:exon

WP_158302771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270873-271019:1:exon

H0I88_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01250
old locus tag: TGRD_178
old locus tag: TGRD_179
old locus tag: TGRD_RS01235
so part of: sequence
location: 271892..273424
location: region:271892-273424:1
so has part: feature:271892-273424:1:exon
subclass of: SO_0000010

position:271892:1
position: 271892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273424:1
position: 273424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271892-273424:1:exon

H0I88_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01250
old locus tag: TGRD_178
old locus tag: TGRD_179
old locus tag: TGRD_RS01235
EC number: 6.3.2.13
inference: COORDINATES: protein motif:HMM:NF001126.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
translation: MKLRELLSDESAFVIGDEDTEVSGVSYDSRKIEKDYAFFSLPGHNTDGRKYIAEAIANGASVIITDSKYDTNDVAQVVIKDIFRFMSLFGAKFYNYPDRELNIMGITGTNGKTTVTYMIESILANSGIECGVIGTVNYRYKGKVIEANNTTPQSLDIYRIMRDISNNGIKYLVMEVSSHALSLGRVYGIEFDTAVFTNLTREHLDFHKNMDRYFEAKSALFKELGAGKKNNKKCAIINVDDEYGRKLLKVGISAEIKLYSAIEKNAADFKASNIKVTNKGAVFNLVFCNKRARIRIKHIGVHNVYNALAALAAAVCSEISFENAVEGLNNSSRVPGRLEKVNTIGLGFEIVVDYAHTDDALESVLRALKDLNPKRIIIVFGCGGDRDRAKRPLMGKIAVEMSDFVFVTSDNPRTEDPYQIILDIEVGIKRAGKKNYKVVVDREAAIKEVIMMAADKGDIILLAGKGHETYQITSGGKVHFNDVKIAEKYIDLKKKQKIAAKQAGQREFIF
SIO_010081: H0I88_RS01250
subclass of: SO_0000673
so part of: H0I88_RS01250
location: 271892..273424
location: region:271892-273424:1
so has part: feature:271892-273424:1:exon

WP_015423190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271892-273424:1:exon

H0I88_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01255
old locus tag: TGRD_179
old locus tag: TGRD_180
old locus tag: TGRD_RS01240
so part of: sequence
location: 273424..274824
location: region:273424-274824:1
so has part: feature:273424-274824:1:exon
subclass of: SO_0000010

position:274824:1
position: 274824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273424-274824:1:exon

H0I88_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01255
old locus tag: TGRD_179
old locus tag: TGRD_180
old locus tag: TGRD_RS01240
EC number: 6.3.2.10
inference: COORDINATES: protein motif:HMM:TIGR01143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: METFYLKDLMRVVGGKFVKGNPGFSANGVSIDSRTIKKGEVYFAMQGARYDGHDFIKEAINKGAAAVVCSKDKIDFVKSFPDSVSIIKTNDTLISLGEFAKSYRTKFKSIKIAGITGSNGKTTTKEILVSIFNRKGRTLSNKGNFNNRIGIPLSIFNLTSDIEYAVFEMGTSLRGEIKILSDILNPDAGIITNVGFSHLETFISPKGVFEEKKVLFDNVKETGFIVINNDDEFLMTAPQYVSRKIIAFALDVAADVCAKNIKLYSNKMDFEIFYKGTSVKIAMPAKGRFNVSNALAAVACAIGFGFSLDEIKCGIENFMPPKMRMETLVTGTDVVLINDAYNANPSSMKKAIQAVLQSYSGKKINLVLGDMLELGDKSADYHSELGKFINAHDVSSVHLLGEMSFYTKEALNTKNVFHSRNSDSLLTQLKQIPAEDDCVFLFKASRGMKLEKICAEFYNILEQRNK
SIO_010081: H0I88_RS01255
subclass of: SO_0000673
so part of: H0I88_RS01255
location: 273424..274824
location: region:273424-274824:1
so has part: feature:273424-274824:1:exon

WP_015423191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273424-274824:1:exon

H0I88_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: mraY
locus tag: H0I88_RS01260
old locus tag: TGRD_180
old locus tag: TGRD_181
old locus tag: TGRD_RS01245
so part of: sequence
location: 274926..275909
location: region:274926-275909:1
so has part: feature:274926-275909:1:exon
subclass of: SO_0000010

position:274926:1
position: 274926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275909:1
position: 275909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274926-275909:1:exon

H0I88_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: mraY
locus tag: H0I88_RS01260
old locus tag: TGRD_180
old locus tag: TGRD_181
old locus tag: TGRD_RS01245
EC number: 2.7.8.13
inference: COORDINATES: protein motif:HMM:TIGR00445.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MICFVAGPCIIEKLENFKIKQIVRTDGPETHLSKNGTPTMGGLLILLSVVASTFLWARLDNRFILWLLTGTLWLGFLGFCDDYLKLKKRDSNGLSAKSKIFGQTVFAAVLAAYLNFFPSNPEFATLVNVPFLKGFFINFSFLYALFVIIVIVGSSNAVNLTDGLDGLAIGNITIVAFSLTLFAYFAGHFQIANYLKIINVSGAGEISIFLFAVVGSSLGFLWYNSHPAEIFMGDTGSLFLGGVLGMVSLFIKQELVLVLLGGVFVIEALSVLIQIFYYRRTGKKVFKMSPLHHHYEMLGLSEMKVTVRFWIAGVILAILSFASLKVR
SIO_010081: H0I88_RS01260
subclass of: SO_0000673
so part of: H0I88_RS01260
location: 274926..275909
location: region:274926-275909:1
so has part: feature:274926-275909:1:exon

WP_232501230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274926-275909:1:exon

H0I88_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: murD
locus tag: H0I88_RS01265
old locus tag: TGRD_181
old locus tag: TGRD_182
old locus tag: TGRD_RS01250
so part of: sequence
location: 275917..277242
location: region:275917-277242:1
so has part: feature:275917-277242:1:exon
subclass of: SO_0000010

position:275917:1
position: 275917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277242:1
position: 277242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275917-277242:1:exon

H0I88_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: murD
locus tag: H0I88_RS01265
old locus tag: TGRD_181
old locus tag: TGRD_182
old locus tag: TGRD_RS01250
EC number: 6.3.2.9
inference: COORDINATES: protein motif:HMM:TIGR01087.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MKKNIGILGLGKSGVAAANLAVKLGYNVFASDSKEKKIKNLNKKVIKEFGGHSDKVLNSDVIIKSPGVYSNIPILKKARKQKIKIMSELAFSLENSKYKKIMAVSGTNGKTTVTDLISKIIKAAHKDSIVSGNIGCPLADKALKTTETTFITMELSSYQLGDTPDFRPAISVLLNITPDHLEYHKTMKAYLRAKENIFINQRDGDFTVINYDDKICRKIFEKTKAAVIFFSKTPLKKGVFYDSGSIVINVKEKHYVIKPKINIVGTHNIENILAAVAASYAAGVKPAVIEKIVSKYKGVEHRIEFVKTLNGVDYYNDSKSTNIDSTRVALESFDKNILIIMGGRDKGVPYTPLKELVKQRVKLIFLIGEASDKIKKDLNGASFVDCGNMENAVKQIFRTAVRADIALLSPACASFDQFENFEERGKVFKKMVLSLGSGAIS
SIO_010081: H0I88_RS01265
subclass of: SO_0000673
so part of: H0I88_RS01265
location: 275917..277242
location: region:275917-277242:1
so has part: feature:275917-277242:1:exon

WP_015423193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275917-277242:1:exon

H0I88_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmE
locus tag: H0I88_RS01270
old locus tag: TGRD_182
old locus tag: TGRD_183
old locus tag: TGRD_RS01255
so part of: sequence
location: 277402..277737
location: region:277402-277737:1
so has part: feature:277402-277737:1:exon
subclass of: SO_0000010

position:277402:1
position: 277402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277737:1
position: 277737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277402-277737:1:exon

H0I88_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmE
locus tag: H0I88_RS01270
old locus tag: TGRD_182
old locus tag: TGRD_183
old locus tag: TGRD_RS01255
inference: COORDINATES: protein motif:HMM:NF000612.0
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MREAIHPKYEESTVSCVCGYTFKTRSIKPLIKLEICSNCHPFFTGRQKLIDTAGRVEKFQKRFAKTMGKTIVKKKTEKKVPVSRKTSGKIFTISPKNAKMDPKKKKETKGK
SIO_010081: H0I88_RS01270
subclass of: SO_0000673
so part of: H0I88_RS01270
location: 277402..277737
location: region:277402-277737:1
so has part: feature:277402-277737:1:exon

WP_015423194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277402-277737:1:exon

H0I88_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: prfA
locus tag: H0I88_RS01275
old locus tag: TGRD_183
old locus tag: TGRD_184
old locus tag: TGRD_RS01260
so part of: sequence
location: 277800..278885
location: region:277800-278885:1
so has part: feature:277800-278885:1:exon
subclass of: SO_0000010

position:277800:1
position: 277800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278885:1
position: 278885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277800-278885:1:exon

H0I88_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: prfA
locus tag: H0I88_RS01275
old locus tag: TGRD_183
old locus tag: TGRD_184
old locus tag: TGRD_RS01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290999.1
GO function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MGDKIMFLEKLKLLNSIFEEVESKLSDLSVISNQEEYRELTKQHFYLRPLAEKYIRYSKLLNEIKDAEELQKSKDAEMKEIAFAEYNNLIEKRNQMENEIKVLLIPTDPNEDKNIIVEIRAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVWRCFKFERGAHRVQRVPETEASGRVHTSAATVAVLPEAEEVDVEIKMEDLRIDTYRASGAGGQHINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIYEQRILEHEMRLSSERKQQIGSGDRSEKIRTYNFPQNRITDHRIGYSVYNITEVMDGNLSELVNKLIKADIESKLKENNI
SIO_010081: H0I88_RS01275
subclass of: SO_0000673
so part of: H0I88_RS01275
location: 277800..278885
location: region:277800-278885:1
so has part: feature:277800-278885:1:exon

WP_125266976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277800-278885:1:exon

H0I88_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: prmC
locus tag: H0I88_RS01280
old locus tag: TGRD_184
old locus tag: TGRD_185
old locus tag: TGRD_RS01265
so part of: sequence
location: 278886..279752
location: region:278886-279752:1
so has part: feature:278886-279752:1:exon
subclass of: SO_0000010

position:278886:1
position: 278886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279752:1
position: 279752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278886-279752:1:exon

H0I88_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: prmC
locus tag: H0I88_RS01280
old locus tag: TGRD_184
old locus tag: TGRD_185
old locus tag: TGRD_RS01265
EC number: 2.1.1.297
inference: COORDINATES: protein motif:HMM:TIGR00536.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MFGDGNVYSLLKRAKRFLESKGLSEPESDVEVLLSFVLQTKRSKLPLMRSQKLTDIQVLQYERYILRRSKREPVAYIMGLAGFMDFEFKVNKNVLIPRPETEILVETALKIAKKENKNSVLDLCTGSGCIAVSLAKLGKFKDIMASDVSGSALEIARENARSNNVLDINFVKSNVFSGISGKNFDIIISNPPYVSHEEYDALEPELKYEPEIALAADDSGLFFYKKIAGKAGRYLNDNGFILIELNAYKAGEIKQIFSTCSYKNIEIVKDYAGLPRMLKAESNSLMGN
SIO_010081: H0I88_RS01280
subclass of: SO_0000673
so part of: H0I88_RS01280
location: 278886..279752
location: region:278886-279752:1
so has part: feature:278886-279752:1:exon

WP_015423196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278886-279752:1:exon

H0I88_RS05895
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05895
so part of: sequence
location: 280124..280339
location: region:280124-280339:1
so has part: feature:280124-280339:1:exon
subclass of: SO_0000010

position:280124:1
position: 280124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280339:1
position: 280339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280124-280339:1:exon

H0I88_RS05895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05895
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MFINSLALNCGVDLEVRDGETLVTIGSSGTGKSILLKNIAELMKPDTGSVKIDGIDITKCSAFNLHEIQKK
SIO_010081: H0I88_RS05895
subclass of: SO_0000673
so part of: H0I88_RS05895
location: 280124..280339
location: region:280124-280339:1
so has part: feature:280124-280339:1:exon

WP_149030001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280124-280339:1:exon

H0I88_RS05900
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05900
so part of: sequence
location: 280300..280593
location: region:280300-280593:1
so has part: feature:280300-280593:1:exon
subclass of: SO_0000010

position:280300:1
position: 280300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280593:1
position: 280593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280300-280593:1:exon

H0I88_RS05900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFCFQFTRNPEKIGYVFQESALFDSLTIFENVAFGLRILTSLVVTHDMKSAYKIADRIMMLYEGKIIFSGTPEEARDTKNEYIRQFVEGSSHWPIIY
SIO_010081: H0I88_RS05900
subclass of: SO_0000673
so part of: H0I88_RS05900
location: 280300..280593
location: region:280300-280593:1
so has part: feature:280300-280593:1:exon

WP_198407709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280300-280593:1:exon

H0I88_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01290
old locus tag: TGRD_RS01275
so part of: sequence
location: 280618..281148
location: region:280618-281148:1
so has part: feature:280618-281148:1:exon
subclass of: SO_0000010

position:280618:1
position: 280618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281148:1
position: 281148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280618-281148:1:exon

H0I88_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01290
old locus tag: TGRD_RS01275
inference: COORDINATES: protein motif:HMM:NF014523.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MlaD family protein
translation: MNNQLKLGIFVAIGFFAIVVSIVSTGAFTLTKTYHVYAKFDNISGLTRKAKVKIAGVEIGVLRGISLDDSKAKLKLLIRKNIVLYQNASAHIASMGVIGMKYIEIIPGDASFPRLKKGDYISTVQRPFIEDTFNNIVNKIAKALDDDKERGDMIENLAAALCSLKQVLDNLAAQNN
SIO_010081: H0I88_RS01290
subclass of: SO_0000673
so part of: H0I88_RS01290
location: 280618..281148
location: region:280618-281148:1
so has part: feature:280618-281148:1:exon

WP_095558691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280618-281148:1:exon

H0I88_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01295
old locus tag: TGRD_RS05850
so part of: sequence
location: 281207..281353
location: region:281207-281353:1
so has part: feature:281207-281353:1:exon
subclass of: SO_0000010

position:281207:1
position: 281207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281353:1
position: 281353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281207-281353:1:exon

H0I88_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01295
old locus tag: TGRD_RS05850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNKQDLRDTISFIRNISDKINVLIARIYDGNGPIAALINDEQISVKT
SIO_010081: H0I88_RS01295
subclass of: SO_0000673
so part of: H0I88_RS01295
location: 281207..281353
location: region:281207-281353:1
so has part: feature:281207-281353:1:exon

WP_158302772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281207-281353:1:exon

H0I88_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: radA
locus tag: H0I88_RS01300
old locus tag: TGRD_185
old locus tag: TGRD_186
old locus tag: TGRD_RS01280
so part of: sequence
location: 282006..283373
location: region:282006-283373:1
so has part: feature:282006-283373:1:exon
subclass of: SO_0000010

position:282006:1
position: 282006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283373:1
position: 283373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282006-283373:1:exon

H0I88_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: radA
locus tag: H0I88_RS01300
old locus tag: TGRD_185
old locus tag: TGRD_186
old locus tag: TGRD_RS01280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016291128.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MKKQKTRFLCQHCGYESVQWLGKCPSCGAWNSFAEEKFSLPVRTGSLSRQLTGFSSEVLKLKDISVKDFSRYQTAIKEFDNMIGGGIVPGSLILLGGAPGIGKSTLMLHISDSLSDRGTVLYISGEESLSQVKARAERLKVKKDNIFLASETNLKNIIDAVNKIDPKFLVIDSIQTTYHPDLSSAPGTVGQVRETAAELLRVAKSKSIAVFLLGHVTKEGDLAGPRVLEHIVDTVLYFENERRQTYRILRAYKNRFGPTSEIGIFEMDSSGLSEVSNPSLIFLGERVAEAAGNTVTVAMEGTRPILLEVQALTARTTFGIPRRMVSGYDANRITILIAVLEKRLNLPLEMQDVFINIAGGVKIKETSADLAVACAIMSANSGFICPKDIIVFGEVGLAGEVRSVTFTAERLSEAEKLGFKKAIIPKSNLKNLSYKGKIDVLGTETLRSAVKFLRN
SIO_010081: H0I88_RS01300
subclass of: SO_0000673
so part of: H0I88_RS01300
location: 282006..283373
location: region:282006-283373:1
so has part: feature:282006-283373:1:exon

WP_015423197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282006-283373:1:exon

H0I88_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01305
old locus tag: TGRD_RS01285
so part of: sequence
location: 283516..283716
location: region:283516-283716:1
so has part: feature:283516-283716:1:exon
subclass of: SO_0000010

position:283516:1
position: 283516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283716:1
position: 283716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283516-283716:1:exon

H0I88_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01305
old locus tag: TGRD_RS01285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKWKYVDDLIKQDGIFHIFASSDVLEVMSRFFKVVNSQAIAKGQFPEQKSCFVIIMVKCRGNLNEK
SIO_010081: H0I88_RS01305
subclass of: SO_0000673
so part of: H0I88_RS01305
location: 283516..283716
location: region:283516-283716:1
so has part: feature:283516-283716:1:exon

WP_095558692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283516-283716:1:exon

H0I88_RS06185
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06185
so part of: sequence
location: 283706..283855
location: region:283706-283855:1
so has part: feature:283706-283855:1:exon
subclass of: SO_0000010

position:283706:1
position: 283706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283855:1
position: 283855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283706-283855:1:exon

H0I88_RS06185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNDIPVQLRFNILKPRTMKLLFEKIPQTKKFSDKIFVYGVADKRFDSW
SIO_010081: H0I88_RS06185
subclass of: SO_0000673
so part of: H0I88_RS06185
location: 283706..283855
location: region:283706-283855:1
so has part: feature:283706-283855:1:exon

WP_232501231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283706-283855:1:exon

H0I88_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01310
old locus tag: TGRD_RS01290
so part of: sequence
location: complement(283943..284134)
location: region:283943-284134:-1
so has part: feature:283943-284134:-1:exon
subclass of: SO_0000010

position:283943:-1
position: 283943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284134:-1
position: 284134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283943-284134:-1:exon

H0I88_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01310
old locus tag: TGRD_RS01290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSAKKSGIFTIGFTNLNGGKMKNICDLCYCAPSKIPARAQECHILLIHIIAKLVEEKIFNQT
SIO_010081: H0I88_RS01310
subclass of: SO_0000673
so part of: H0I88_RS01310
location: complement(283943..284134)
location: region:283943-284134:-1
so has part: feature:283943-284134:-1:exon

WP_095558693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283943-284134:-1:exon

H0I88_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: accC
locus tag: H0I88_RS01315
old locus tag: TGRD_186
old locus tag: TGRD_187
old locus tag: TGRD_RS01295
so part of: sequence
location: complement(284508..285857)
location: region:284508-285857:-1
so has part: feature:284508-285857:-1:exon
subclass of: SO_0000010

position:284508:-1
position: 284508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285857:-1
position: 285857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284508-285857:-1:exon

H0I88_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: accC
locus tag: H0I88_RS01315
old locus tag: TGRD_186
old locus tag: TGRD_187
old locus tag: TGRD_RS01295
EC number: 6.3.4.14
inference: COORDINATES: protein motif:HMM:NF006367.0
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
translation: MFKKVLIANRGEIACRVIRACRELGIKTIAIHSEVDRESMHVKFADQSICVGDASVSESYLNIPSIIAAAEISGADAIHPGYGFLAENTYFAEVCEACRLNFIGPSKESIEQMGNKITAIKLMKKSGIPVIPGSDGPVNVDDPKIFDTAQKIGYPVIIKATAGGGGKGMRIVTSKENLKNSIVMAQTEAKAAFGNPEIYMEKYIEEPHHIEFQILGDKYGKTAYLPERDCSIQRRHQKLIEESPSPLISDTLRKKMGRVARNAAEAVKYVTVGTVEFLVDKKGYFYFIEMNTRIQVEHPVTELVTGIDLVKEQIKLAAGEKLLIVPEKINILGHAIECRINAEDPDRDFIPSPGTIGKLFLPGGPGIRLDTHVYSGYTIPPFYDSLIAKIIALGESRDEAIARMSRALREVEIEGIKNTSALHSKIMANEKFRKGSVSTNFLPKYILGR
SIO_010081: H0I88_RS01315
subclass of: SO_0000673
so part of: H0I88_RS01315
location: complement(284508..285857)
location: region:284508-285857:-1
so has part: feature:284508-285857:-1:exon

WP_015423198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284508-285857:-1:exon

H0I88_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01320
old locus tag: TGRD_187
old locus tag: TGRD_188
old locus tag: TGRD_RS01300
so part of: sequence
location: complement(285933..286412)
location: region:285933-286412:-1
so has part: feature:285933-286412:-1:exon
subclass of: SO_0000010

position:285933:-1
position: 285933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286412:-1
position: 286412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285933-286412:-1:exon

H0I88_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01320
old locus tag: TGRD_187
old locus tag: TGRD_188
old locus tag: TGRD_RS01300
inference: COORDINATES: protein motif:HMM:NF012584.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin/lipoyl-containing protein
translation: MNSQEVKELLKSIKDTDIEEIQYQSGDNSLYLKKTDVKAIAPDVKEAIETEVKVKNKKEEDKKIVLTAIKSTMVGTFASAQSNDKPPFVREGDNIVVGQKIGQIEAMKIIKDILSNIKGRISKILVSNGQSVEYGQELFLVDTSKQCERSERKDRVKFE
SIO_010081: H0I88_RS01320
subclass of: SO_0000673
so part of: H0I88_RS01320
location: complement(285933..286412)
location: region:285933-286412:-1
so has part: feature:285933-286412:-1:exon

WP_015423199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285933-286412:-1:exon

H0I88_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: efp
locus tag: H0I88_RS01325
old locus tag: TGRD_188
old locus tag: TGRD_189
old locus tag: TGRD_RS01305
so part of: sequence
location: complement(286521..287078)
location: region:286521-287078:-1
so has part: feature:286521-287078:-1:exon
subclass of: SO_0000010

position:286521:-1
position: 286521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287078:-1
position: 287078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286521-287078:-1:exon

H0I88_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: efp
locus tag: H0I88_RS01325
old locus tag: TGRD_188
old locus tag: TGRD_189
old locus tag: TGRD_RS01305
inference: COORDINATES: protein motif:HMM:NF001810.0
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P
translation: MISTSDFKNGTNILVDGEPYQIAWFQNHKPGKGGAVMRVKLRHLKKGGIIERTFKSGEKFKALTITRQKKRFLYKESNNFNFMDMDTYEQITVHPELLGKMVNFLKENLEVEAIYLENELIGIDLPVIIEMTIAEAEHGIKGDSVSNTTKTAKLETGADIHVPLFIKEGDRIKVDTRTGEYVERA
SIO_010081: H0I88_RS01325
subclass of: SO_0000673
so part of: H0I88_RS01325
location: complement(286521..287078)
location: region:286521-287078:-1
so has part: feature:286521-287078:-1:exon

WP_015423200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286521-287078:-1:exon

H0I88_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01330
old locus tag: TGRD_189
old locus tag: TGRD_190
old locus tag: TGRD_RS01310
so part of: sequence
location: complement(287095..288147)
location: region:287095-288147:-1
so has part: feature:287095-288147:-1:exon
subclass of: SO_0000010

position:287095:-1
position: 287095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288147:-1
position: 288147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287095-288147:-1:exon

H0I88_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01330
old locus tag: TGRD_189
old locus tag: TGRD_190
old locus tag: TGRD_RS01310
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF012766.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M24 family metallopeptidase
translation: MKEKILKKILGKYQTESILFTNVKETSYLTGAEFDGFWLLNAKDNTHIICSKMIENQIMEYFGKQNIRMHAESPLYKTVVKILKQDKINSLLINPKYMNAADFILINENLSHEKINLIKKTGVLDSLRIIKGTVEVENLKKACQIVSEVCNTVKEELKPGLSEIDIHYRVIELFAKNRVTESFIPIIASGANSANPHHRSSNRKIIENDIVMMDIGCMYNGYCSDLTRTYFLDKINDKQKKIWNIVKSSQNAVLKEIKAGLPLSWADKTARNIIEAAGYKDKFIHTTGHGVGIEIHEMPLLAPNAEGVFLTHMAVTVEPGIYIEGEFGVRIEDTILIKENGCEMLTSAVY
SIO_010081: H0I88_RS01330
subclass of: SO_0000673
so part of: H0I88_RS01330
location: complement(287095..288147)
location: region:287095-288147:-1
so has part: feature:287095-288147:-1:exon

WP_015423201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287095-288147:-1:exon

H0I88_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01335
old locus tag: TGRD_190
old locus tag: TGRD_191
old locus tag: TGRD_RS01315
so part of: sequence
location: 288290..288493
location: region:288290-288493:1
so has part: feature:288290-288493:1:exon
subclass of: SO_0000010

position:288290:1
position: 288290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288493:1
position: 288493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288290-288493:1:exon

H0I88_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01335
old locus tag: TGRD_190
old locus tag: TGRD_191
old locus tag: TGRD_RS01315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MAQGKVKWFNDQKGYGFISNDDGSGDVFAHYSAIQSDGFKSLAEGDSVEFEIVNSDKGPKAANIKKI
SIO_010081: H0I88_RS01335
subclass of: SO_0000673
so part of: H0I88_RS01335
location: 288290..288493
location: region:288290-288493:1
so has part: feature:288290-288493:1:exon

WP_015423202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288290-288493:1:exon

H0I88_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: aroQ
locus tag: H0I88_RS01340
old locus tag: TGRD_191
old locus tag: TGRD_192
old locus tag: TGRD_RS01320
so part of: sequence
location: complement(288567..288998)
location: region:288567-288998:-1
so has part: feature:288567-288998:-1:exon
subclass of: SO_0000010

position:288567:-1
position: 288567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288998:-1
position: 288998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288567-288998:-1:exon

H0I88_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: aroQ
locus tag: H0I88_RS01340
old locus tag: TGRD_191
old locus tag: TGRD_192
old locus tag: TGRD_RS01320
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290277.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MKKILVLNGPNINMLGIREPAVYGNITLAEIEKSLSSLAKELKVEVEFFQSNHEGKIVDKIQDSINKIFGIIINPAALTHTSITIRDALSSISVPTIEVHISNIYAREEFRHKSYIAAEAIGQIAGLGIDGYLFALRKMVSLM
SIO_010081: H0I88_RS01340
subclass of: SO_0000673
so part of: H0I88_RS01340
location: complement(288567..288998)
location: region:288567-288998:-1
so has part: feature:288567-288998:-1:exon

WP_015423203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288567-288998:-1:exon

H0I88_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: aroB
locus tag: H0I88_RS01345
old locus tag: TGRD_192
old locus tag: TGRD_193
old locus tag: TGRD_RS01325
so part of: sequence
location: complement(288995..290080)
location: region:288995-290080:-1
so has part: feature:288995-290080:-1:exon
subclass of: SO_0000010

position:288995:-1
position: 288995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290080:-1
position: 290080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288995-290080:-1:exon

H0I88_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: aroB
locus tag: H0I88_RS01345
old locus tag: TGRD_192
old locus tag: TGRD_193
old locus tag: TGRD_RS01325
EC number: 4.2.3.4
inference: COORDINATES: protein motif:HMM:TIGR01357.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MKQIIVNLKTKKYDIVISQSENDFFTALAKAAKTNMFFVITDKNVEKLHLKYFTVLLKRKGFNVKTAVISAGEIGKNIKSLSFLYDKALEAGIDRKSCAIALGGGVIGDVAGFFAATYMRGINYIQVPTTLLAMTDSSVGGKTAVNIKGGKNIAGVFYQPDLVWINSAFLSTLTERHIKNGLAEIIKYAFTFDKKFYSYLSDTLENGTVPPKDFEYIIYQSCSYKARVVEKDEKEITGLRAVLNFGHTFAHALETATKYKKFLHGEAVAVGMLFAVKLSLKLRICKPETYKEVENLLQKADFTLSTKNNARQMLSLMKKDKKSIDGNIKFILIKDIGKAVSTYVKDNVVLNVLKNFTGENK
SIO_010081: H0I88_RS01345
subclass of: SO_0000673
so part of: H0I88_RS01345
location: complement(288995..290080)
location: region:288995-290080:-1
so has part: feature:288995-290080:-1:exon

WP_015423204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288995-290080:-1:exon

H0I88_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01350
old locus tag: TGRD_RS01330
old locus tag: TGRD_tRNA13
so part of: sequence
location: complement(290367..290438)
location: region:290367-290438:-1
so has part: feature:290367-290438:-1:exon
subclass of: SO_0000663

position:290367:-1
position: 290367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290438:-1
position: 290438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290367-290438:-1:exon

H0I88_RS01350
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01350
old locus tag: TGRD_RS01330
old locus tag: TGRD_tRNA13
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(290404..290406),aa:Met,seq:cat)
SIO_010081: H0I88_RS01350
subclass of: SO_0000673
so part of: H0I88_RS01350
location: complement(290367..290438)
location: region:290367-290438:-1
so has part: feature:290367-290438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290367-290438:-1:exon

H0I88_RS05905
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05905
so part of: sequence
location: 290935..291432
location: region:290935-291432:1
so has part: feature:290935-291432:1:exon
subclass of: SO_0000010

position:290935:1
position: 290935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291432:1
position: 291432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290935-291432:1:exon

H0I88_RS05905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05905
inference: COORDINATES: protein motif:HMM:NF023583.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M N-terminal domain-containing protein
translation: MMFEQSFKNIDDILRKDAGCSSELDYIEQTSWILFLRYLDSLEQTKIKAALLEDKKYTNIILKEFQWDVWACPKKGGKLDYNEARTGDDLIDFVNQKLFPYFKKFKTTSENYNTIEYKIGEIFGELKNKTQSGYNLREILNIVDELKFSTSAQKHEMSHLYESKI
SIO_010081: H0I88_RS05905
subclass of: SO_0000673
so part of: H0I88_RS05905
location: 290935..291432
location: region:290935-291432:1
so has part: feature:290935-291432:1:exon

WP_198407710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290935-291432:1:exon

H0I88_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01355
old locus tag: TGRD_pseudo_41
old locus tag: TGRD_RS01335
so part of: sequence
location: 291437..292399
location: region:291437-292399:1
so has part: feature:291437-292399:1:exon
subclass of: SO_0000010

position:291437:1
position: 291437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292399:1
position: 292399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291437-292399:1:exon

H0I88_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01355
old locus tag: TGRD_pseudo_41
old locus tag: TGRD_RS01335
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MGNAGRNGGEYYTPRPLIRTIVKVVDPKIGDKIYDGAAGSAGFLVEAFVYLHEKVKTTGEQSTLQHDTFYGKEKKALAYIIGIMNMILHGIEAPNILHTNTLSENIKDMQEKDKFNVVLANPPFGGKERSEVQQNFDIRTGETAFLFLQHFIKILKAGGKAGVVIKNTFLSNTDNASVSLRKGLIENCNLHTVLDLPSGVFIGAGVKTVILFFEKGSPTRKIWYYQLNLDRNLGKTNPLSEDDLADFVKLQKTKADSDNSWTVKITDINKETYDLSVKNSNKKDETAIRDPEDILKEIAALDKQSVKIIAEIEKVLIMEK
SIO_010081: H0I88_RS01355
subclass of: SO_0000673
so part of: H0I88_RS01355
location: 291437..292399
location: region:291437-292399:1
so has part: feature:291437-292399:1:exon

WP_198407711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291437-292399:1:exon

H0I88_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01360
old locus tag: TGRD_193
old locus tag: TGRD_194
old locus tag: TGRD_RS01340
so part of: sequence
location: 292400..293047
location: region:292400-293047:1
so has part: feature:292400-293047:1:exon
subclass of: SO_0000010

position:292400:1
position: 292400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293047:1
position: 293047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292400-293047:1:exon

H0I88_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01360
old locus tag: TGRD_193
old locus tag: TGRD_194
old locus tag: TGRD_RS01340
inference: COORDINATES: protein motif:HMM:NF024098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3800 domain-containing protein
translation: MAYIFMDESGCLGFDFTKAKTSRYFVIAFLMAKNDNVINKAVSKIFKSIPKNELRVHCGTLHCYKENDRTRIKLLTELKGLEDKDVSVMSIILNKKKVVDYLQSEKTRLYNYITKILLDRIINKRLLLSDESIDFIASRREKNRFLNENFRNYLKTKAFPNHKLKIEVSITPPHSVKGLQAVDFVSWAVFKKYEHAKSHYYNIIENLVVEESPLF
SIO_010081: H0I88_RS01360
subclass of: SO_0000673
so part of: H0I88_RS01360
location: 292400..293047
location: region:292400-293047:1
so has part: feature:292400-293047:1:exon

WP_015423205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292400-293047:1:exon

H0I88_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01365
old locus tag: TGRD_194
old locus tag: TGRD_195
old locus tag: TGRD_RS01345
so part of: sequence
location: 293239..294486
location: region:293239-294486:1
so has part: feature:293239-294486:1:exon
subclass of: SO_0000010

position:293239:1
position: 293239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294486:1
position: 294486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293239-294486:1:exon

H0I88_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01365
old locus tag: TGRD_194
old locus tag: TGRD_195
old locus tag: TGRD_RS01345
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MRINSKREVKKLGEICEIVNGGTPKTNVREYWNGTNLWITPAEMGKREIPFVEKTVRQLSDSGLKNSSAKLLPPYSVILSSRAPIGHLVINTKPMATNQGCKGLIPSGKLFYLFLYYYLYFSVDYLDKLGTGTTFKELPTWKLKEVEIPFPLLSEQKRIVTKLDKFSENIKRLEDAARKNIQNVKDLFNSVLNETFKNKSAVVNDNRQVYKKAHWEVKKLGEICTFINGLWAGKKCPFINVYVIRNTNFTKDGKLDLSNVVNLSLEKKQYEKKRLEYDDIILEKSGGGPKQPVGRVVLFDIKKGNFSFSNFTSVIRIINKRYVYPKYLYNYLFYCYISGMTEVMQSHSTGIRNLNFDEYKKINIVFPSISEQKKIVARLDKLSTKTKKLEIVYQEKIDGLAELKKSVLKQTFDCG
SIO_010081: H0I88_RS01365
subclass of: SO_0000673
so part of: H0I88_RS01365
location: 293239..294486
location: region:293239-294486:1
so has part: feature:293239-294486:1:exon

WP_015423206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293239-294486:1:exon

H0I88_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01370
old locus tag: TGRD_pseudo_42
old locus tag: TGRD_RS01350
so part of: sequence
location: 294614..296638
location: region:294614-296638:1
so has part: feature:294614-296638:1:exon
subclass of: SO_0000010

position:294614:1
position: 294614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296638:1
position: 296638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294614-296638:1:exon

H0I88_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01370
old locus tag: TGRD_pseudo_42
old locus tag: TGRD_RS01350
inference: COORDINATES: protein motif:HMM:NF037510.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MNEAETRAELIDPKLKDSGWIEENNCKIFREFTIAEPKIGLRSSHGLKADYVLSYKNVKLAVVEAKKSSLSAGEGVNQSKLYAQKLNIRCALATNGREIYFIDMETGKEKEIDKFPAPDELYNNIFVMQNEWRDRFNSEPFENKGGSISVRYYQEIAVNKVMRAVSENKNRILLTLATGTGKTYIAFQIAWKLFKTRWNINKDGKRLPRILFLADRNILADQAFNTFSAFPEDALKRIKPEEIKKTGRVPTNGSIFFTIFQTFMSGADEKPYFGQYPKDYFDFIIIDECHRGGANDESRWRAILDYFYPAVHFGMTATPKREKNADTYKYFGDPVYIYSLKDGINDGFLTPFKVRRIQTTLDSYIYTPDDDVIEGEVKKNHEYVIEEFNRDIEIEEREKKHVKIFMNEIDQKEKTLVFGANQDHAALLRDLINQIKTIENPDYCVRVTSNDCEIGNQHLRDFQDNDKTIPTILTTSQKLSTGVDARNVRNIVLMRSVNSMIEFKQIIGRGTRLFDGKEYFTIYDFVGAYKNFSDSQWDGEPVEDADIYESTKKEQIKSFKSSDIAGAEALLERPKKQKVKIKLAPGKEREIQYMSQTSFWDASGIPISAEQFICKLFGKLPEFFKNEQELRDIWSYPDTRKKILEKLEHAGTVVKNLKFYSNLHIHKTAICLIL
SIO_010081: H0I88_RS01370
subclass of: SO_0000673
so part of: H0I88_RS01370
location: 294614..296638
location: region:294614-296638:1
so has part: feature:294614-296638:1:exon

WP_198407712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294614-296638:1:exon

H0I88_RS05910
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05910
so part of: sequence
location: 296623..296919
location: region:296623-296919:1
so has part: feature:296623-296919:1:exon
subclass of: SO_0000010

position:296623:1
position: 296623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296919:1
position: 296919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296623-296919:1:exon

H0I88_RS05910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05910
inference: COORDINATES: protein motif:HMM:NF020052.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification enzyme R subunit C-terminal domain-containing protein
translation: MFDTLEYLAYNVKPLTRAARAGKAKNEIAKVEEFEDKQKAFLEFVLEKYVDAGVKELEQEKLSELVKLRYNTIDDGLAELGDAEQIKEVFISFQKYLY
SIO_010081: H0I88_RS05910
subclass of: SO_0000673
so part of: H0I88_RS05910
location: 296623..296919
location: region:296623-296919:1
so has part: feature:296623-296919:1:exon

WP_232501232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296623-296919:1:exon

H0I88_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: folK
locus tag: H0I88_RS01375
old locus tag: TGRD_195
old locus tag: TGRD_196
old locus tag: TGRD_RS01355
so part of: sequence
location: 296932..297456
location: region:296932-297456:1
so has part: feature:296932-297456:1:exon
subclass of: SO_0000010

position:296932:1
position: 296932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297456:1
position: 297456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296932-297456:1:exon

H0I88_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: folK
locus tag: H0I88_RS01375
old locus tag: TGRD_195
old locus tag: TGRD_196
old locus tag: TGRD_RS01355
EC number: 2.7.6.3
inference: COORDINATES: protein motif:HMM:TIGR01498.1
GO function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
translation: MKNAVYLSLGSNVGDRAENIVSALSFLQSSLFADIKKISSFYETAPIGPKQRSFYNIVIEAQTDLKPDDLLLFIKQAEHILGRRKTIRWGPRVIDIDILLFCRKIINQTGLTVPHKEIQNRLFVLIPLSEIAGDFVHPVLKQKISGILYDKSLTLKCQKVKIIQTNIANRSLKN
SIO_010081: H0I88_RS01375
subclass of: SO_0000673
so part of: H0I88_RS01375
location: 296932..297456
location: region:296932-297456:1
so has part: feature:296932-297456:1:exon

WP_015423207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296932-297456:1:exon

H0I88_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: panB
locus tag: H0I88_RS01380
old locus tag: TGRD_196
old locus tag: TGRD_197
old locus tag: TGRD_RS01360
so part of: sequence
location: 297502..298302
location: region:297502-298302:1
so has part: feature:297502-298302:1:exon
subclass of: SO_0000010

position:297502:1
position: 297502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298302:1
position: 298302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297502-298302:1:exon

H0I88_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: panB
locus tag: H0I88_RS01380
old locus tag: TGRD_196
old locus tag: TGRD_197
old locus tag: TGRD_RS01360
EC number: 2.1.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009245056.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
translation: MKKKTVLTILKKKQSGEKITMLTCYDYVTAKLISSQDIDVLLVGDSLGNVKLGYENTLSVTVDDMIYHTKSVKRGNDGALLITDMPFMSYEITVEDAVKNAARIVKEGGAEAVKVEGGIEIVDRVKAISDAKVPIVGHLGLTPQSINKFGGFKVQGRTEEERGRLIADAEALEKTGAFAVVLEAVPEQLAKEVTERLKIPTIGIGSGRYCDGQVLVVDDMLGMFTDFTPKFVKKYAEIGEMVRTAVKNYIDEVKKGQFPREENTYK
SIO_010081: H0I88_RS01380
subclass of: SO_0000673
so part of: H0I88_RS01380
location: 297502..298302
location: region:297502-298302:1
so has part: feature:297502-298302:1:exon

WP_015423208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297502-298302:1:exon

H0I88_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: panC
locus tag: H0I88_RS01385
old locus tag: TGRD_197
old locus tag: TGRD_198
old locus tag: TGRD_RS01365
so part of: sequence
location: 298299..299150
location: region:298299-299150:1
so has part: feature:298299-299150:1:exon
subclass of: SO_0000010

position:298299:1
position: 298299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299150:1
position: 299150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298299-299150:1:exon

H0I88_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: panC
locus tag: H0I88_RS01385
old locus tag: TGRD_197
old locus tag: TGRD_198
old locus tag: TGRD_RS01365
inference: COORDINATES: protein motif:HMM:NF014611.2
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
translation: MKIIKNASQMQKIALRHIKNGDEIGLVPTMGALHEGHISLIAKSVKNDDITIVSIFVNPIQFGPNEDYLKYPRPVKKDKEICKKNHVDYVFMPSVNDMFPADHKTFIEVKTLQDILCGAFRINHFKGVATVIAKLFNISCADRAYFGMKDFQQLKIIEKMGKDLNFRTKIIPCSIVRERNGLALSSRNSYLSAEGKKRSLNISKSLKEAAEDFKRRDLNFVKKTVINKLKKIPGSEIDYAEIVNFDDLLPADKNTKKAVFAVAVWIGKTRLIDNIMMIKDKDS
SIO_010081: H0I88_RS01385
subclass of: SO_0000673
so part of: H0I88_RS01385
location: 298299..299150
location: region:298299-299150:1
so has part: feature:298299-299150:1:exon

WP_015423209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298299-299150:1:exon

H0I88_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: nadB
locus tag: H0I88_RS01390
old locus tag: TGRD_198
old locus tag: TGRD_199
old locus tag: TGRD_RS01370
so part of: sequence
location: 299151..300713
location: region:299151-300713:1
so has part: feature:299151-300713:1:exon
subclass of: SO_0000010

position:299151:1
position: 299151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300713:1
position: 300713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299151-300713:1:exon

H0I88_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: nadB
locus tag: H0I88_RS01390
old locus tag: TGRD_198
old locus tag: TGRD_199
old locus tag: TGRD_RS01370
EC number: 1.4.3.16
inference: COORDINATES: protein motif:HMM:TIGR00551.1
GO function: GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-aspartate oxidase
translation: MISSDYLVIGSGIAGLSLALKASKNGSVSLITKKKLFDSATGKAQGGIACVMDESDSFEAHVRDTIVSGAGLCNEKMVEKMVVEGPERIRELIVLGVEFTKKKDSDSKFELALEGGHGKRRILHAGDITGNEIERVLIRNIEKHKNITVYEYHTAIDLILNKDRICRGVYVFDSENNNTEIFEAKVTALTCGGAGKTYLYTSNPDVATGDAVAMAYRAGADIANMEFVQFHPTCLHSSDARSFLISEAVRGEGAVLKLKDGGSFVEKYNPQKELASRDVVARAIDCELKSSGEKFVYLDITAKSKDFLMKRFPNIYAKCLEYGIDISRDMIPVVPAAHFFCGGVVIDENGRSSIKNLYAAGETACSGVHGANRLASNSLLEGVVYADRIYKDSLQFLRKEYSKIDGKPIGNIKSSLNKSAVFVQKKEEVRRLTWDYLGISRSNEGLLKAQEKIDVLKVEIEQCFKKAPFTIDGIEVRNMMFIAEMIARSAIQRKESRGLHFNTDYLFLLPDVKDTVINIR
SIO_010081: H0I88_RS01390
subclass of: SO_0000673
so part of: H0I88_RS01390
location: 299151..300713
location: region:299151-300713:1
so has part: feature:299151-300713:1:exon

WP_015423210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299151-300713:1:exon

H0I88_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: uvrA
locus tag: H0I88_RS01395
old locus tag: TGRD_199
old locus tag: TGRD_200
old locus tag: TGRD_RS01375
so part of: sequence
location: 300723..303551
location: region:300723-303551:1
so has part: feature:300723-303551:1:exon
subclass of: SO_0000010

position:300723:1
position: 300723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303551:1
position: 303551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300723-303551:1:exon

H0I88_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: uvrA
locus tag: H0I88_RS01395
old locus tag: TGRD_199
old locus tag: TGRD_200
old locus tag: TGRD_RS01375
EC number: 3.1.25.-
inference: COORDINATES: protein motif:HMM:NF001503.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MEKENIMDIIKIRGARQHNLKNIDLDIPRNKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLELMEKPDVDIIEGLSPAISIEQRNPLHNPRSTVGTVTEVYDYLRLLFAKVGVPHCPKCGKIIRPQSAQQIIDEIMKMPAATVIHILSPLIKGRTGTYEELFSRLAKSGYSRVRVDNEVYLLDEKIELNRYKKHTIDIVIDRITLNENLRSRVAASIETALKESKGTVSVAVIKDGKSIAETVYSEQYACTDCGINLSDIEPRLFSFNLPFGACPECGGLGNKIEIDENLVVPDKNRSVRHGAIIAWSEPITTKTNRWKNSWGGYYRELLTEVARKNKISLIVPWEELIREHQKILLYGQDDFEGVITNMQRRYNETESAFVREEIYNKYMTRKICPLCGGQRLKREALSVLVGGKSISDVTKMSVEKSFDFFDKIRFGGKDKIISKAVLKEIHERLRFLNNVGLGYLSLERESGTLSGGEAQRIHLATQIGSGLTGVLYVLDEPSIGLHQKDNYKLLETLIKLRDLGNTLIVVEHDEDTMRRADRIIDLGPGAGVYGGHIVAEGNAKEIVKFKNSLTGQYLKGVLQIPVPKKRKQLSDKCLTVEGASQFNLKNIDVHIPIGLFICVTGVSGSGKSTLVHEIVYKSIAHKLYGSKEKPGKFKNMDGLENIDKVVIVDQSPIGRTPRSNPVTYTGAFSIIRDLFAWVPEAKARGYQPGRFSFNVKGGRCENCQGDGTLKTEMQFLPDIYVRCDVCGGRRFNEETLQIKYKGRNIDEVLNMTVEESVKFFENIPVLKRILSTIEDVGLGYIRIGHQATMLSGGEAQRVKLATELSKKATGRTMYILDEPTTGLHFADVSKLLEVLQRFSYAGNTVLVIEHNLDVIKTADWLIDLGPEGGERGGRLVAEGTPEDVMKNPKSFTGYYLRNHINRHK
SIO_010081: H0I88_RS01395
subclass of: SO_0000673
so part of: H0I88_RS01395
location: 300723..303551
location: region:300723-303551:1
so has part: feature:300723-303551:1:exon

WP_232501233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300723-303551:1:exon

H0I88_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01400
old locus tag: TGRD_200
old locus tag: TGRD_201
old locus tag: TGRD_RS01385
so part of: sequence
location: 303858..304571
location: region:303858-304571:1
so has part: feature:303858-304571:1:exon
subclass of: SO_0000010

position:303858:1
position: 303858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304571:1
position: 304571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303858-304571:1:exon

H0I88_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01400
old locus tag: TGRD_200
old locus tag: TGRD_201
old locus tag: TGRD_RS01385
inference: COORDINATES: protein motif:HMM:NF020296.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA alkylation repair protein
translation: MKINFKENLLKDLKKYKNEIFANRYAKYFQTHKGGYGEGDFFWGLKVPQQRITARKYWKDINLKDVEKLLQHRIHEVRLTALMILIEKYKKADDAKSVIVKIYLRNSECINNWDLVDLSAPYIPGHYWHDNSLKDFWEYAESGSLWKERIAMISTLYFIRQGRFVETLALSKLFLAHNHDLIHKASGWMLREVGKRDTRTLISFLDKYSNVMPRTMLRYSIEKLSQEKREYYMEKDI
SIO_010081: H0I88_RS01400
subclass of: SO_0000673
so part of: H0I88_RS01400
location: 303858..304571
location: region:303858-304571:1
so has part: feature:303858-304571:1:exon

WP_015423212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303858-304571:1:exon

H0I88_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01405
old locus tag: TGRD_201
old locus tag: TGRD_202
old locus tag: TGRD_RS01390
so part of: sequence
location: 304861..306036
location: region:304861-306036:1
so has part: feature:304861-306036:1:exon
subclass of: SO_0000010

position:304861:1
position: 304861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306036:1
position: 306036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304861-306036:1:exon

H0I88_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01405
old locus tag: TGRD_201
old locus tag: TGRD_202
old locus tag: TGRD_RS01390
inference: COORDINATES: protein motif:HMM:NF024423.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MITKDLILRIFSAANILRWNDHIRPFDFFELDKQAHKMIIAYIVAKFEEEDDKPVDWVKLIECGIFEFFQRIMLTDLKPEVFREIMSKKEKELNRWVIENLNNDLSVLKGEFSKRCSEYLLESDYALHEKRILSASHCLSTKWEFNIIYPWNSMIYGIEKTKNEIEESIAAFDDLSGIKKLVINKKYYGFLDLCGQLRFQQRWAQAFRIPKTTVLGHMLTVAIFAYLLSMEINASDRRKYNNFYSSLFHDLPEILTKDIIKPVKSSIVGLENIIKHYEKKQVVEKILPLIPPEWHFEMQYFIEDEFLDKIIENGKVKKVDNAADFNDNKYNAVDGTLTEMCDKLCAYIEASMALEYGIKSSTLIKSKQTLYDKYSNVRKNNLDFRRLFDHF
SIO_010081: H0I88_RS01405
subclass of: SO_0000673
so part of: H0I88_RS01405
location: 304861..306036
location: region:304861-306036:1
so has part: feature:304861-306036:1:exon

WP_015423213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304861-306036:1:exon

H0I88_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01410
old locus tag: TGRD_RS01395
old locus tag: TGRD_tRNA14
so part of: sequence
location: complement(306693..306776)
location: region:306693-306776:-1
so has part: feature:306693-306776:-1:exon
subclass of: SO_0000663

position:306693:-1
position: 306693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306776:-1
position: 306776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306693-306776:-1:exon

H0I88_RS01410
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01410
old locus tag: TGRD_RS01395
old locus tag: TGRD_tRNA14
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(306741..306743),aa:Leu,seq:cag)
SIO_010081: H0I88_RS01410
subclass of: SO_0000673
so part of: H0I88_RS01410
location: complement(306693..306776)
location: region:306693-306776:-1
so has part: feature:306693-306776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306693-306776:-1:exon

H0I88_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01415
old locus tag: TGRD_202
old locus tag: TGRD_203
old locus tag: TGRD_RS01400
so part of: sequence
location: 307006..307791
location: region:307006-307791:1
so has part: feature:307006-307791:1:exon
subclass of: SO_0000010

position:307006:1
position: 307006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307791:1
position: 307791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307006-307791:1:exon

H0I88_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01415
old locus tag: TGRD_202
old locus tag: TGRD_203
old locus tag: TGRD_RS01400
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MDSFIELKKISVLRGDRKILDDINFDISSGENVAVIGPNGSGKSTFIKLITGKIYPSYTGNGTVCKLFGHSRWNIHNLRSMLGIVTNELQHDFYNEITGFEAVLSGFFSSVGISNNHIVTKDMTKKADDMIDFLEVSSLRNKKLETMSSGEARRFLIARALVNNPKVLVLDEPSNSLDISSSLKLHNTMRKISYSGTKIILVTHLVSDIIPEMNRFVFFKGGKIFADGKRSEVFTCDKLSSLFDMKVKLAENNGLCCITIV
SIO_010081: H0I88_RS01415
subclass of: SO_0000673
so part of: H0I88_RS01415
location: 307006..307791
location: region:307006-307791:1
so has part: feature:307006-307791:1:exon

WP_015423214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307006-307791:1:exon

H0I88_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01420
old locus tag: TGRD_203
old locus tag: TGRD_204
old locus tag: TGRD_RS01405
so part of: sequence
location: 308004..310574
location: region:308004-310574:1
so has part: feature:308004-310574:1:exon
subclass of: SO_0000010

position:308004:1
position: 308004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310574:1
position: 310574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308004-310574:1:exon

H0I88_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01420
old locus tag: TGRD_203
old locus tag: TGRD_204
old locus tag: TGRD_RS01405
inference: COORDINATES: protein motif:HMM:NF021445.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerol lysyltransferase domain-containing protein
translation: MRKWIKFIIVPLGFLIFIGALMLLHDQLKDLNYVDIINALKAIPALRITIALFLSLSYYLIFGGYDVIAFKYIGLKVPLSLKDILFTCFISNVLGSNTGYSMLFGGSIRYRLYSVYNVPIVDVTKIIIFSSITIWLGFLTVGGLIFTFAPVSLERMFSFNFTTRTIGLFFIAVLVLYIFLSILRSRPIKIFKWNVAFPNIKIVSSQILLATYDWLIASLILYILMPSGEISYFVLLKAFLVSQLLGIISQVPGGIGVFETAISKLLPNSASNPGVIGGLLAYRAIFYFFPFLIALALLGIFEIMMFIKKFNGKAKIFGKTISSVIIRVIALSSFFAGMIVMFSTSTPFDVVQLKFVINILPAWFANLSHFLLSITAIGLLFVSKTLQLRVKSAWSTACILISFMIVLVLVVGEPPLVLLYLIALLISLLFSKKYFYRDMSILNTAFNAWWFSAIAVGGILSVWIGFFVNRQDTFSWVHLGVFFKNILSTTDAARFLRASLGMGIIIFIAVLEQISRNLFKKPVSFTKRDIKNIVDSSDYTYSFNALASDKSYIVNDEKDAFIMYAKSKGSLIALGDPIGKSERRNELLWQFKEIADNALAKPAFIGVDHKYMQIYDDIGLDTFNIGQEARVPLITFDKRDNRFEYFCSLEKDIEDSGFKYQIMNAGQFGQYKEIFAKINEEWEKNTNYLERNFIPGKYDESYMNDMDFGILEKAGKIYAFSIIIKTKNKCELSSEVVRYIKCDHNVFAYVVFKNILWAKQNEYDWFNLGFAYSPAVNSDGGVIRHFAKMFMFAEHFDYNLVFLRKFKDKFYPVWRNKYIAVSPDKYIVTFIKNFTTLISPLRMVDEKHLFRRFFKR
SIO_010081: H0I88_RS01420
subclass of: SO_0000673
so part of: H0I88_RS01420
location: 308004..310574
location: region:308004-310574:1
so has part: feature:308004-310574:1:exon

WP_015423215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308004-310574:1:exon

H0I88_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tilS
locus tag: H0I88_RS01425
old locus tag: TGRD_204
old locus tag: TGRD_205
old locus tag: TGRD_RS01410
so part of: sequence
location: 310571..311536
location: region:310571-311536:1
so has part: feature:310571-311536:1:exon
subclass of: SO_0000010

position:310571:1
position: 310571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311536:1
position: 311536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310571-311536:1:exon

H0I88_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tilS
locus tag: H0I88_RS01425
old locus tag: TGRD_204
old locus tag: TGRD_205
old locus tag: TGRD_RS01410
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MKTWNIFYQNVSQNGFVIPGDKIILSVSGGMDSMCMLHLFWRLAKKMDIVFLAVNFNHNLRKESVKEAETVKNLSAEFGIDCLLEEIGVKEYSKKYSLSVETAGRNLRYLTLERISKKYKCNKIATAHNANDNAETVLMRLLRGSGNFAGIPQKRKINRNIVVIRPLLPVKRKFIEEYVRNHKLPFCTDKSNFSDIYTRNKIRLSLMPVFEKINPMAVEHIFALSCIQSRENAYLEEVSAKFLKKCVKKQKNQILLDLKTFLRYNKTIQFRILKNLLPQKKYNSHINLIMRKIVLSDTSVYRLSAGWIFKIKSDKACFIRN
SIO_010081: H0I88_RS01425
subclass of: SO_0000673
so part of: H0I88_RS01425
location: 310571..311536
location: region:310571-311536:1
so has part: feature:310571-311536:1:exon

WP_015423216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310571-311536:1:exon

H0I88_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ftsH
locus tag: H0I88_RS01430
old locus tag: TGRD_205
old locus tag: TGRD_206
old locus tag: TGRD_RS01415
so part of: sequence
location: 311809..313704
location: region:311809-313704:1
so has part: feature:311809-313704:1:exon
subclass of: SO_0000010

position:311809:1
position: 311809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313704:1
position: 313704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311809-313704:1:exon

H0I88_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: ftsH
locus tag: H0I88_RS01430
old locus tag: TGRD_205
old locus tag: TGRD_206
old locus tag: TGRD_RS01415
inference: COORDINATES: protein motif:HMM:TIGR01241.2
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MKKSNPWFVFFWITLLVIVLMFINFARQGGNEVELEYSQFKQHIKAGSVFKVLVAPGLIRGQFRDGDGVFKRFKTVPMDDPNLVKDMEDNKVLEFSATEKSGWLGSLLLNWGPVVLLILFCFWMMRGMSMGNKQAMSFGKTKAKLAVGASKKITFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAVAGEANVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAVGRHRFAGIGGGHDEREQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDRQVIILSPDLKDREEILGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEAALLAARNSQNAVNMKNMEEAIDRILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFLPSADPVHKVSIIPRGPALGYTLQLPEEDKYLTSKSELLDKLSILFGGRVAEELVFSEITTGAQNDISKATGIAMRMVTEFGMSDKIGPMALQRPNEEVFLGRDISRDARHSGKTSELIDEEVKNIIYSSKSRASKIIKDNVSILNKIVSYLLERENLSGEDIDKIIKGEELAPLSESSSVDEETKKKSTVEKKVINEKVIIS
SIO_010081: H0I88_RS01430
subclass of: SO_0000673
so part of: H0I88_RS01430
location: 311809..313704
location: region:311809-313704:1
so has part: feature:311809-313704:1:exon

WP_015423217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311809-313704:1:exon

H0I88_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: folE
locus tag: H0I88_RS01435
old locus tag: TGRD_206
old locus tag: TGRD_207
old locus tag: TGRD_RS01420
so part of: sequence
location: 313764..314336
location: region:313764-314336:1
so has part: feature:313764-314336:1:exon
subclass of: SO_0000010

position:313764:1
position: 313764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314336:1
position: 314336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313764-314336:1:exon

H0I88_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: folE
locus tag: H0I88_RS01435
old locus tag: TGRD_206
old locus tag: TGRD_207
old locus tag: TGRD_RS01420
EC number: 3.5.4.16
inference: COORDINATES: protein motif:HMM:NF006826.0
GO function: GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO process: GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP cyclohydrolase I FolE
translation: MQIFNFDEKKAQRAVKLLLESFGEDLNREGIKRTPERVAEFYKEVLSGNKIDPLKFIPVHYATEDHEEIVLVKDITFYSLCEHHLLPFFGKMHIAYIPKKDRIIGVSKLIKLVEIFANRLQLQERLTKQLADIVMKFVKPHGVMVVVEAEHLCMTMRGVKKTGSKIITSAMRGIFLKDVRTRSEAMSLLR
SIO_010081: H0I88_RS01435
subclass of: SO_0000673
so part of: H0I88_RS01435
location: 313764..314336
location: region:313764-314336:1
so has part: feature:313764-314336:1:exon

WP_015423218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313764-314336:1:exon

H0I88_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: folP
locus tag: H0I88_RS01440
old locus tag: TGRD_207
old locus tag: TGRD_208
old locus tag: TGRD_RS01425
so part of: sequence
location: 314748..315914
location: region:314748-315914:1
so has part: feature:314748-315914:1:exon
subclass of: SO_0000010

position:314748:1
position: 314748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315914:1
position: 315914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314748-315914:1:exon

H0I88_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: folP
locus tag: H0I88_RS01440
old locus tag: TGRD_207
old locus tag: TGRD_208
old locus tag: TGRD_RS01425
EC number: 2.5.1.15
inference: COORDINATES: protein motif:HMM:TIGR01496.1
GO function: GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydropteroate synthase
translation: MIIRKAIVSNFNDALRLVKNTGSSSIVNELLAKKGVFNAIVIEKIDNRAANILKQETISVGASVALNENVSRFKKGISNTVLFATVNQIEKLIKKLRLQPFRLKEIALKLENIVNKKKVFKYRERYMDLSNPVVMGIVNVDPNSFSGDGLTDPNEALKQAVEFERFGAGIIDIGAESSRPGTKLIDAKTEIKRLIPALKRIRKNVKIPVSVDTYKYETVKAALDEGADIINDIFALRKGRERSAKLIADAKAGVILMHMKGIPKNMQTSPEYKNCTSEVYGFLAQQKEYAVGFDIEEERIAVDPGPGFGKTVEHSVELIKNIGVFSTLGAVVGAVSRKRFIKALAGEDRTSFIAANFLAGFCGADIIRAHDVKETVNVLKMAETFRRM
SIO_010081: H0I88_RS01440
subclass of: SO_0000673
so part of: H0I88_RS01440
location: 314748..315914
location: region:314748-315914:1
so has part: feature:314748-315914:1:exon

WP_015423219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314748-315914:1:exon

H0I88_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cdaA
locus tag: H0I88_RS01445
old locus tag: TGRD_208
old locus tag: TGRD_209
old locus tag: TGRD_RS01430
so part of: sequence
location: 315914..316777
location: region:315914-316777:1
so has part: feature:315914-316777:1:exon
subclass of: SO_0000010

position:316777:1
position: 316777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315914-316777:1:exon

H0I88_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cdaA
locus tag: H0I88_RS01445
old locus tag: TGRD_208
old locus tag: TGRD_209
old locus tag: TGRD_RS01430
EC number: 2.7.7.85
inference: COORDINATES: protein motif:HMM:TIGR00159.1
GO function: GO:0004016 - adenylate cyclase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diadenylate cyclase CdaA
translation: METMLNIYNTYIVNILDIFILAIVFYRVVLIIKGTMAIQIIVGILFILGFTIVAEYVLYLRVLSWLLSRLWVTAVVIFAVIFQTEIRSVLARLGGQLWGLKAKVKDSYIIEIVEAVEDLSVSMSGGLIAIEKEIGLKNFAETGIPLNADISKELLLSIFKNKSAPLHDGAIIIFKDKISAAGCLLPLNNDTGVEILGTRHRSALGLSEVTDAVIIVVSEETGRISVAYKGELSFNISSAELRKIISINGEAEVKMKRLYIKMRENWQLKLLALCLAIFVWLYVVGYK
SIO_010081: H0I88_RS01445
subclass of: SO_0000673
so part of: H0I88_RS01445
location: 315914..316777
location: region:315914-316777:1
so has part: feature:315914-316777:1:exon

WP_015423220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315914-316777:1:exon

H0I88_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01450
old locus tag: TGRD_209
old locus tag: TGRD_210
old locus tag: TGRD_RS01435
so part of: sequence
location: 316758..318119
location: region:316758-318119:1
so has part: feature:316758-318119:1:exon
subclass of: SO_0000010

position:316758:1
position: 316758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318119:1
position: 318119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316758-318119:1:exon

H0I88_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01450
old locus tag: TGRD_209
old locus tag: TGRD_210
old locus tag: TGRD_RS01435
inference: COORDINATES: protein motif:HMM:NF014877.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MWLDISEMKLFGTDGIRGDSFKFPFDNITLGIIGKSIAETLVSKKDILVIRDTRESGKRIQKELAKGILSAGVTPVFGGIMPTPAASFLMQSGKYSAAVVISASHNPYMDNGIKIFNSKGLKIGDFVETEIEKKVNKYLGLKAVVSIKKIKVVENSELLKFYKEFIVRNFTGSDLKGKTIVIDCANGASYKCAPYVLRKLGARVIALNVKPNGKNINLNCGALQPEYAVKIVKELKAFCGFAFDGDADRLVCIDENGIVRDGDYFLASMACWLKSKKNLKNNILVATVMTNIGFLQAMKREKIKIVSAKVGDRYVISDMKKYKAVLGGEQSGHFIFKDILATGDGLLSAVMLLTALSDKNKTMLEFMNVIEKFPQVFINKKVSVRIPVEKLSESYKLIKSYERSLGTDGRILVRYSGTENLLRVMVEGKEIKEIKTIAKNIADSIEKEIKYYE
SIO_010081: H0I88_RS01450
subclass of: SO_0000673
so part of: H0I88_RS01450
location: 316758..318119
location: region:316758-318119:1
so has part: feature:316758-318119:1:exon

WP_095558696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316758-318119:1:exon

H0I88_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01455
old locus tag: TGRD_RS01445
so part of: sequence
location: 318422..318622
location: region:318422-318622:1
so has part: feature:318422-318622:1:exon
subclass of: SO_0000010

position:318422:1
position: 318422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318622:1
position: 318622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318422-318622:1:exon

H0I88_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01455
old locus tag: TGRD_RS01445
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKTGVKGVYEHKIDEWRKLFDEAVNELNYRIRVTSFRESADNKMSSGEIYILRVVNDSSGGGYFG
SIO_010081: H0I88_RS01455
subclass of: SO_0000673
so part of: H0I88_RS01455
location: 318422..318622
location: region:318422-318622:1
so has part: feature:318422-318622:1:exon

WP_095558698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318422-318622:1:exon

H0I88_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01460
old locus tag: TGRD_210
old locus tag: TGRD_211
old locus tag: TGRD_RS01450
so part of: sequence
location: 318591..319358
location: region:318591-319358:1
so has part: feature:318591-319358:1:exon
subclass of: SO_0000010

position:318591:1
position: 318591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319358:1
position: 319358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318591-319358:1:exon

H0I88_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01460
old locus tag: TGRD_210
old locus tag: TGRD_211
old locus tag: TGRD_RS01450
EC number: 2.6.99.2
inference: COORDINATES: protein motif:HMM:NF003625.0
GO function: GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxine 5'-phosphate synthase
translation: MTVVEEVISDKMVKLGVNIDHIATIRQARKEDFPSVIKAAAICEKSGADGITVHLREDRRHIQDEDVYDLRKSLKIKLNLEMAASEEIVKIALDVKPDFVCMVPEKRQELTTEGGLDVKAHKSKLASIVARLQKAGIIVSVFIDANTEQVLACSEIKADSIELHTGKYAKFFKENGTDSSEFKEEMERLSEASRKAVKKGLILNAGHGLDYDNVERICNIPGMNEFNIGFSIIAESVFAGLETAVRNMKELISKD
SIO_010081: H0I88_RS01460
subclass of: SO_0000673
so part of: H0I88_RS01460
location: 318591..319358
location: region:318591-319358:1
so has part: feature:318591-319358:1:exon

WP_197702020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318591-319358:1:exon

H0I88_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: glmS
locus tag: H0I88_RS01465
old locus tag: TGRD_211
old locus tag: TGRD_212
old locus tag: TGRD_RS01455
so part of: sequence
location: 319362..321197
location: region:319362-321197:1
so has part: feature:319362-321197:1:exon
subclass of: SO_0000010

position:319362:1
position: 319362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321197:1
position: 321197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319362-321197:1:exon

H0I88_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: glmS
locus tag: H0I88_RS01465
old locus tag: TGRD_211
old locus tag: TGRD_212
old locus tag: TGRD_RS01455
EC number: 2.6.1.16
inference: COORDINATES: protein motif:HMM:NF001484.0
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIFGYIGKKNAVDIIFKGLEKLEYRGYDSAGIAVVIDKELCIRRSVGKLCNLGLSLKENPISANIGIGHTRWATHGSPSKENAHPHTDTAKTVVIVHNGIIENYVELKAELQKDGYEFKSETDTEVIAHLIKKYCKGNLFCAVQKTLSRVKGSYALGIVSKDEYDKIICARKDASLIIGVGVGENFMASDIPALLPYTRDMIFLENGDIAEITAEKVVVKNIKGDIINREIKNIRWDTVQAEKDGYKHFMLKEIFEQPRTIEDTFRGRIYPDEGRVYIEEVKLKLKEEYIKNISNIYIVACGTSYHSGLVSKFLFESFAKIPTEVDIASEFRYRDVILDEKTLVVVISQSGETADTLAALRLAKSKGCQTLAVCNVVGSSISREAMYVIYTHCGPEIGVASTKAFTGQVTALYVLALDWAYKREALTIKELKKYLKELWEIPLKINEFLKNAESVHDIAKVFANKRDFLYLGRHINYPVALEGALKIKEISYIHAEGYAAGEMKHGPIALIDKSMPIVAIVIKGRIYEKIISNIEEAKARGGTIIAVADQSDKEIGNKSNYVIYVPETDEFVSPLMTVIPLQLLAYYISLILGCDVDQPRNLAKSVTVE
SIO_010081: H0I88_RS01465
subclass of: SO_0000673
so part of: H0I88_RS01465
location: 319362..321197
location: region:319362-321197:1
so has part: feature:319362-321197:1:exon

WP_015423223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319362-321197:1:exon

H0I88_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: acpS
locus tag: H0I88_RS01470
old locus tag: TGRD_212
old locus tag: TGRD_213
old locus tag: TGRD_RS01460
so part of: sequence
location: 321542..321877
location: region:321542-321877:1
so has part: feature:321542-321877:1:exon
subclass of: SO_0000010

position:321542:1
position: 321542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321877:1
position: 321877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321542-321877:1:exon

H0I88_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: acpS
locus tag: H0I88_RS01470
old locus tag: TGRD_212
old locus tag: TGRD_213
old locus tag: TGRD_RS01460
EC number: 2.7.8.7
inference: COORDINATES: protein motif:HMM:TIGR00556.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MNVGIDIEEVERFVKYVRDKKFLERIFAKEEISYSIPRKNVAQYLAARFAAKEAVWKALSTRNKKFTIADISVRNTKDGKPQVYIKNKKYKRIDISLSHTDKYVAAVAIAF
SIO_010081: H0I88_RS01470
subclass of: SO_0000673
so part of: H0I88_RS01470
location: 321542..321877
location: region:321542-321877:1
so has part: feature:321542-321877:1:exon

WP_015423224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321542-321877:1:exon

H0I88_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01475
old locus tag: TGRD_213
old locus tag: TGRD_214
old locus tag: TGRD_RS01465
so part of: sequence
location: 321885..322739
location: region:321885-322739:1
so has part: feature:321885-322739:1:exon
subclass of: SO_0000010

position:321885:1
position: 321885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322739:1
position: 322739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321885-322739:1:exon

H0I88_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01475
old locus tag: TGRD_213
old locus tag: TGRD_214
old locus tag: TGRD_RS01465
inference: COORDINATES: protein motif:HMM:TIGR00196.1
GO function: GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-hydrate dehydratase
translation: MKEKEIRSFASKLKRKPDSYKYNYGHVLVIAGSNTMPGSGILCCLGALRSGSGLVTYAVRDNFLDQACAISKPEVMFFVYRTATDILDFIKSRKVTSIVIGPGLKADNSVLCKFIKEIIYAVNIPVILDASGLACFNGIAGELKTTNAKLIITPHLGEFSKLLNIQSAVIENDRKKIVADFAEVNSLICVLKGSNTFVSCGKKNYKNNTGTPAMATAGSGDVLSGIISSFVNVTDDVFEAVTFAVFIHGLAGEIAEKDKGMTGVIASDIAENICYAIKQIMMKR
SIO_010081: H0I88_RS01475
subclass of: SO_0000673
so part of: H0I88_RS01475
location: 321885..322739
location: region:321885-322739:1
so has part: feature:321885-322739:1:exon

WP_015423225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321885-322739:1:exon

H0I88_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01480
old locus tag: TGRD_214
old locus tag: TGRD_215
old locus tag: TGRD_RS01470
so part of: sequence
location: 323150..325594
location: region:323150-325594:1
so has part: feature:323150-325594:1:exon
subclass of: SO_0000010

position:323150:1
position: 323150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325594:1
position: 325594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323150-325594:1:exon

H0I88_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01480
old locus tag: TGRD_214
old locus tag: TGRD_215
old locus tag: TGRD_RS01470
inference: COORDINATES: protein motif:HMM:TIGR01587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase/endonuclease Cas3
translation: MISENQPLLFYAHLSKSKDDKNKRQELNTHLTEVAEMSQKNASKIGMRNIGYCLGLLHDLGKYSELYQDYLLGERGDISRGDIDHSTAGAQYFNEFIKASMQDDNKLKNFLSEQIELCCVSHHSGLIDMIDIRGKNNFDKRLNKKYYYKETVSIEDIKKNIEKDVVDKINNIANNNLLYEIEQIKSKIDKNSKNEIYRTFSYGMLARFLLSCLIDADHTNSADFERGKKIKNKLVDWNIISEKLEKAIDELNDKNKSSENIKEIRKQISDDCAIAGQTYQKGCYKLEVPTGGGKTLASFRFAVEMAKKCNAGIDRIIYCIPFTTIIEQNANTIRKIVEADKSDKGNIVLEHHSNISQTSYDKGKEEEFNPTELYMQSWDIPIIFTTNVQILEVLFGRRTSDTRKLHQLANSIIIFDEVQSLPIKCVHLFNNAINYLVDFCNTTVVLCTATQPLLDNVDPERGCLKLSEKPDIIQNRNCVFDSLKRVEVKPEIKDVDYTSEEIASKAAEFVNDNENCLVICNTTKSAKEIFEIIKGRVDYEVYHLSARMMPIHRKIVLRAIKRKLNKRKKIAVVSTQVIEAGIDIDFNCGIRALAGLDSIIQAAGRINRNGTLKTNDGNNKKGKLYVYNFNENLGILDDIKRGKDTAKIILRRHPNADLLDNKIIKDYYDDFFYQKEQRKDMQFLICNENTELDLLSENRKYNGKYNLTLNQSFKEASNNFKVIDNIASPVCIEIKRVRKIIDKINSSFDSKERYKLIKKLHKYRVNIYPSQFKNSTAIKPINNDLDIYSISDCYYDKNFGITEEAALDKGGACV
SIO_010081: H0I88_RS01480
subclass of: SO_0000673
so part of: H0I88_RS01480
location: 323150..325594
location: region:323150-325594:1
so has part: feature:323150-325594:1:exon

WP_015423226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323150-325594:1:exon

H0I88_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas5c
locus tag: H0I88_RS01485
old locus tag: TGRD_215
old locus tag: TGRD_216
old locus tag: TGRD_RS01475
so part of: sequence
location: 325587..326330
location: region:325587-326330:1
so has part: feature:325587-326330:1:exon
subclass of: SO_0000010

position:325587:1
position: 325587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326330:1
position: 326330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325587-326330:1:exon

H0I88_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas5c
locus tag: H0I88_RS01485
old locus tag: TGRD_215
old locus tag: TGRD_216
old locus tag: TGRD_RS01475
inference: COORDINATES: protein motif:HMM:TIGR01876.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas5c
translation: MFNIPKNAIEFKVYGKYALFTDPITKLGGEKCSYQIPTYEAIKGITESIYWKPTFIWIIDKVRVMKSIEMEAKGVRTLKYHGGVGLYYYTYLRDVEYQVQAHFEWNVNESNLIQDRIDGKHFAIANRSLENGGRRDIFIGTRECQGYVEPCKFGEGDSDYDNNNLLSFGSMFYNFGYPNETGKKELITRIWLDANMKKGTVDFNDKKNNIKERIVKPMQQENQYVLDKNILKVNTEYENIFGNMEVK
SIO_010081: H0I88_RS01485
subclass of: SO_0000673
so part of: H0I88_RS01485
location: 325587..326330
location: region:325587-326330:1
so has part: feature:325587-326330:1:exon

WP_015423227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325587-326330:1:exon

H0I88_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01490
old locus tag: TGRD_216
old locus tag: TGRD_217
old locus tag: TGRD_RS01480
so part of: sequence
location: 326330..328327
location: region:326330-328327:1
so has part: feature:326330-328327:1:exon
subclass of: SO_0000010

position:328327:1
position: 328327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326330-328327:1:exon

H0I88_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01490
old locus tag: TGRD_216
old locus tag: TGRD_217
old locus tag: TGRD_RS01480
inference: COORDINATES: protein motif:HMM:NF021243.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas8c/Csd1
translation: MSWFQRLYETYGNCVAAQGKFEIAPVAHTNKVCNIEIKLNEKAEFIEAEFIEAITPIPTTDDNNCLWPLAVDIKTYQKEKDKQGKELKVTYKKLLKEWSDTADIKIQIVNKYIQKNTLIQDLVEKKRILWLSEDGKFIEKPKNKKDITDKYKIFQYVKKQEDVFIRWIVDTDKCRKTWEDKAIIESWINFRKQKENKKYKSEIEKTYRKIDKENNIVSRLTDDKICYISGEITDCITTNHPFANGTSKLIAVGDDLVFKGIFEEYYEALSVSFDVSQKAHNTLKWLISKERKQAYRNYPQIIVAFTINGKSGNVGLIFGEDFVKSAKGYRIDFEKFEEDEKIVKTSLQSRKHKIDFEKFEEDEKIVLLEMNAASPGRACITYYKELLGSQYLKNIKNWHKKYCWQFLKRKNKNSQKKEYQYFCGTPSINTIANSYFYKKDKYSAEKSEQNIKRKLIRDLMPSVLENKNIPEYIEKHFIEKASNPVVLNNIQWKTILSIACSIYKGNHLYYDENKKEEDCLMSVDENCKDRNYLYGRLLAVIDDAEKSALLKQNKENSNAKEAIRSTNAQRLMRQFSIKPFETWKFLYEKFNDAYKKRLSGDWIDKRIADIKDKFTSIEEFENNLKLTGLYLLGYFHQLKTIENERGAAIQNKNKKEKEFSNDTAK
SIO_010081: H0I88_RS01490
subclass of: SO_0000673
so part of: H0I88_RS01490
location: 326330..328327
location: region:326330-328327:1
so has part: feature:326330-328327:1:exon

WP_015423228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326330-328327:1:exon

H0I88_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas7c
locus tag: H0I88_RS01495
old locus tag: TGRD_217
old locus tag: TGRD_218
old locus tag: TGRD_RS01485
so part of: sequence
location: 328311..329162
location: region:328311-329162:1
so has part: feature:328311-329162:1:exon
subclass of: SO_0000010

position:328311:1
position: 328311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329162:1
position: 329162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328311-329162:1:exon

H0I88_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas7c
locus tag: H0I88_RS01495
old locus tag: TGRD_217
old locus tag: TGRD_218
old locus tag: TGRD_RS01485
inference: COORDINATES: protein motif:HMM:NF016963.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas7/Csd2
translation: MTLLSKKIDFVVIFKVKSANPNGDPLNENMPRTLADGIGEVTDVCIKRKIRNRLLDMNKDIFVQSDDYKKDKYSSLQERANEEIGKISETSDFSTKACEKWMDVRAFGQVFAYEKGSSIGIRGPVTIRTAFSKEPIIVISDQITKSVNSKSNKKGNDSDDEGMASDRMGMKHWIREAIYVFYGAMNPQLAEKTAFTDEDAKDIKDVLPKLFEKDASSARPEGSMEILKVIWFEHNSPAGQYSSAKVHSSIKIDNSGNIENEKDLENGTVESIKGLKAEIIQGW
SIO_010081: H0I88_RS01495
subclass of: SO_0000673
so part of: H0I88_RS01495
location: 328311..329162
location: region:328311-329162:1
so has part: feature:328311-329162:1:exon

WP_015423229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328311-329162:1:exon

H0I88_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas4
locus tag: H0I88_RS01500
old locus tag: TGRD_218
old locus tag: TGRD_219
old locus tag: TGRD_RS01490
so part of: sequence
location: 329166..329804
location: region:329166-329804:1
so has part: feature:329166-329804:1:exon
subclass of: SO_0000010

position:329166:1
position: 329166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329804:1
position: 329804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329166-329804:1:exon

H0I88_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas4
locus tag: H0I88_RS01500
old locus tag: TGRD_218
old locus tag: TGRD_219
old locus tag: TGRD_RS01490
inference: COORDINATES: protein motif:HMM:NF014040.2
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MYCEDDLLHIRGVQQLSYCKRRCALLFIEQQWSDNFFTAKGIVMHDKAHAEKIEHKKGVVIERDIYLKSYELGLIGKSDVVEFHRSGNKLIPFPVEYKSGKAKSDNVDKVQLCAQALCLEEMMNVTIESGAIFYGKTRNRLNVEFNKSLREETFALAQEFHSLVDSRETPKPEYSKKCYNCSFKELCLPEIFDKQKSVKKYLKEIVNNEKTI
SIO_010081: H0I88_RS01500
subclass of: SO_0000673
so part of: H0I88_RS01500
location: 329166..329804
location: region:329166-329804:1
so has part: feature:329166-329804:1:exon

WP_015423230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329166-329804:1:exon

H0I88_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas1c
locus tag: H0I88_RS01505
old locus tag: TGRD_219
old locus tag: TGRD_220
old locus tag: TGRD_RS01495
so part of: sequence
location: 329788..330822
location: region:329788-330822:1
so has part: feature:329788-330822:1:exon
subclass of: SO_0000010

position:329788:1
position: 329788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330822:1
position: 330822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329788-330822:1:exon

H0I88_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas1c
locus tag: H0I88_RS01505
old locus tag: TGRD_219
old locus tag: TGRD_220
old locus tag: TGRD_RS01495
inference: COORDINATES: protein motif:HMM:TIGR00287.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated endonuclease Cas1c
translation: MKKLFSTLYVSTQGTYISKERENIVVSLQSKELFRAPIHLINSVVCFGNIMCSPFLLGLCAENNASVSYFTEYGRFIAKVQSPVSGNVLLRKQQYKYSDDGKFCLETAQSVLLGKLNNSRTVINRALRDHEDKISDSDKLKQVSDGLRRAIANIFNAENVDVLRGMEGDAAVAYFSVFNKLILNHKEEFFMPGRNRRPPKDRVNCLLSFVYTLLVHDVSSALEGVGLDPQVGFLHKDRPGRPSLALDIMEEFRSVIADRLVLTLINLSQVNANGFSESPSGGVIMDDENRKIVIDAYRKRKEEEIFHPFFKENIHIGLLYHAQALLFARYIRGDIDAYPPFIWK
SIO_010081: H0I88_RS01505
subclass of: SO_0000673
so part of: H0I88_RS01505
location: 329788..330822
location: region:329788-330822:1
so has part: feature:329788-330822:1:exon

WP_015423231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329788-330822:1:exon

H0I88_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS01510
old locus tag: TGRD_220
old locus tag: TGRD_221
old locus tag: TGRD_RS01500
so part of: sequence
location: 330832..331122
location: region:330832-331122:1
so has part: feature:330832-331122:1:exon
subclass of: SO_0000010

position:330832:1
position: 330832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331122:1
position: 331122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330832-331122:1:exon

H0I88_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS01510
old locus tag: TGRD_220
old locus tag: TGRD_221
old locus tag: TGRD_RS01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293323.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MLVLISYDISTIDAGGQKRLRRVSKECLDYGQRVQYSVFECEVDPTQWIFLKDKLLNTVNLKKDSIRFYMLGSDWKRKIEHYGCKKPVDLHETLII
SIO_010081: H0I88_RS01510
subclass of: SO_0000673
so part of: H0I88_RS01510
location: 330832..331122
location: region:330832-331122:1
so has part: feature:330832-331122:1:exon

WP_015423232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330832-331122:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 1408204
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 331298..331329
rpt unit seq: gtcgcgccccgtgtgggcgcgtgaattgaaat
so part of: sequence
location: 331298..338700
location: region:331298-338700:1
so has part: feature:331298-338700:1:region

position:331298:1
position: 331298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338700:1
position: 338700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331298-338700:1:region

H0I88_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas9
locus tag: H0I88_RS01515
old locus tag: TGRD_221
old locus tag: TGRD_222
old locus tag: TGRD_RS01505
so part of: sequence
location: 339128..342226
location: region:339128-342226:1
so has part: feature:339128-342226:1:exon
subclass of: SO_0000010

position:339128:1
position: 339128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342226:1
position: 342226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339128-342226:1:exon

H0I88_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas9
locus tag: H0I88_RS01515
old locus tag: TGRD_221
old locus tag: TGRD_222
old locus tag: TGRD_RS01505
inference: COORDINATES: protein motif:HMM:TIGR01865.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II CRISPR RNA-guided endonuclease Cas9
translation: MKKRILGLDIGIASVGWALVEFDDEFQDNKKKGTIIKSGVRIFTRAETPKERESLAKPRREARSQRRRIRRRVERLNSIRELFVKNGVVEEWSVSKKNPNNIYITLNQIKTPWQLRMESLDRKLTNEQFAVVLTHLAKHRGYKSLRKDDKAGKVLEAISQNKKRLNDSDYRTLGEMFCKNESYKEHKRNKGGEYINSVARELIEEEVEKIFVKQREKGNNFADVNTEREYLKIAFSQKPAGSISKMVGFCTFENGEKRAPRDSYSAELFKVLCTINNTTFTDMKTGEIRSFSKEEIGKTLETVKNVKDVKYAKIRKDLGLEDSVKFSGVDYRENAKSKGEGEIFVSMKTYHEIKSKIEKLSKEKWDNLKGNTELLDSIVNIIANLKDDESIKKEFQKLKIDEDIIDVLLNFEFKKFINLSFKALRKIIPFQFQGQKYITASTSAGYSLKQEGIKNKLVPPAKENINVAVVARAFAQTRKVINAVIRKYGQFDQINIELATELKNSKFDRSKIEEGQKKFQSQKDKIFKEVQELRGGMTPSSSLLLKYRLWREQDERCVYSGRKISFEDLLDTGFLDIDHIIPYSKSMDDSFNNKVLCLAEENRNKKNDIPFNYYQRIDRDWNLLISIITSMKNMKIAKKSRLLKQELSDIEGFIERNINDTRYATRYIKDFLENNLEFKENEFIKVKVQARSGGLTSVLSYNWGMSKDREESYFHHAKDAIIVACSTQGMVQYISKISQQYENDKDKMKKIKDKTENCIPKPWDSFRADVEESIEGIFVSFAPRHKVTGSAHKETIYSKKHLEKERYVTVKKSLDKIKLSDLENIPCNENCGIIRVLKERLEKFKNDSLKAFADPVHMPTKCPNKKGPVIRSVKIKESNKTGIEVRKGLAERGEMVRVDVFIKDKKYYLVPIYVSDFKNKDLPNKAIAALKLENEWIMIDKTYSFKFSLFKDDLIKIKKKKEEIFGYFGGVHRSTGTIKIKSRHKPKEIDEGIGSRCLLDFRKFQVDVLGNYTEVKHEKRMPAYITRKDKKH
SIO_010081: H0I88_RS01515
subclass of: SO_0000673
so part of: H0I88_RS01515
location: 339128..342226
location: region:339128-342226:1
so has part: feature:339128-342226:1:exon

WP_015423233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339128-342226:1:exon

H0I88_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas1
locus tag: H0I88_RS01520
old locus tag: TGRD_222
old locus tag: TGRD_223
old locus tag: TGRD_RS01510
so part of: sequence
location: 342223..343119
location: region:342223-343119:1
so has part: feature:342223-343119:1:exon
subclass of: SO_0000010

position:342223:1
position: 342223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343119:1
position: 343119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342223-343119:1:exon

H0I88_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas1
locus tag: H0I88_RS01520
old locus tag: TGRD_222
old locus tag: TGRD_223
old locus tag: TGRD_RS01510
inference: COORDINATES: protein motif:HMM:TIGR03639.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II CRISPR-associated endonuclease Cas1
translation: MSWRTVFFSKPCSLSVKNSQLYCRFQDSTVHDIPIEDISVIVLESNRINLTSALISECSQSNIVIFSCDSSHIPCGIYVPFNQHSRFTQTANSQVKWDTAFKNRIWQKIVKQKICNQAEIIKKYSFANYVGLKGTCDRVQSGDKTNCEAFAAKIYWESIFENFQRNKNSDIRNSALNYGYAIVRGVVARSLASSGFITCFGVHHSNDLNAFNLADDIIEPFRPFVDDIAIDIFKNSETSKELLKEHKQQLLSVLSTDCIFNDKNSNILTAASQTTESFMIASRELNPDKLLLPEFKTA
SIO_010081: H0I88_RS01520
subclass of: SO_0000673
so part of: H0I88_RS01520
location: 342223..343119
location: region:342223-343119:1
so has part: feature:342223-343119:1:exon

WP_015423234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342223-343119:1:exon

H0I88_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS01525
old locus tag: TGRD_223
old locus tag: TGRD_224
old locus tag: TGRD_RS01515
so part of: sequence
location: 343116..343445
location: region:343116-343445:1
so has part: feature:343116-343445:1:exon
subclass of: SO_0000010

position:343116:1
position: 343116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343445:1
position: 343445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343116-343445:1:exon

H0I88_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: cas2
locus tag: H0I88_RS01525
old locus tag: TGRD_223
old locus tag: TGRD_224
old locus tag: TGRD_RS01515
inference: COORDINATES: protein motif:HMM:TIGR01573.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MKKEGTRFMRILVFFDLPTETAENRHNAAKFRNNLIKDGYYMLQYSVYCRICRGMDSSEKHIRRLMMRTPMEGNIRVLEITEKQYERMKIILGKKQLAEQIDSRQLVFF
SIO_010081: H0I88_RS01525
subclass of: SO_0000673
so part of: H0I88_RS01525
location: 343116..343445
location: region:343116-343445:1
so has part: feature:343116-343445:1:exon

WP_015423235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343116-343445:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 1408204
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 343559..343594
rpt unit seq: gttatagtttccttcctctctcagatgtgctataat
so part of: sequence
location: 343493..344980
location: region:343493-344980:1
so has part: feature:343493-344980:1:region

position:343493:1
position: 343493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344980:1
position: 344980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343493-344980:1:region

H0I88_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01530
old locus tag: TGRD_224
old locus tag: TGRD_225
old locus tag: TGRD_RS01520
so part of: sequence
location: complement(345048..346265)
location: region:345048-346265:-1
so has part: feature:345048-346265:-1:exon
subclass of: SO_0000010

position:345048:-1
position: 345048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346265:-1
position: 346265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345048-346265:-1:exon

H0I88_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01530
old locus tag: TGRD_224
old locus tag: TGRD_225
old locus tag: TGRD_RS01520
EC number: 2.8.4.-
inference: COORDINATES: protein motif:HMM:TIGR00089.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MiaB/RimO family radical SAM methylthiotransferase
translation: MKKYYIHTFGCKVNQYESQLISEKFRKDNFECTQKPEEADIIIFNSCTVTADADKKLEYFLRRATKLPNRPKIMLTGCIVKNKNIDIKNLFPDIEIITDKTKLFIEPQKQKVSGFDRHSRAFLKIQDGCKSFCSYCIVPYVRSTLWSKPENEVLSEIKNLVKSGYSEIVLTGIHTGKYDGGLSDLLEKIIKIPLAFRVRISSVELSEIDDKFIELIETNTEKICRHLHVPLQSGSDEILKQMNRNYSTKEFEKKVSKIMRILPDLALTTDIITGFPGETEKHHKETCDFVKQILFARFHIFRYSYRQETKASTFGNKVPTSEIKNRAKDIFEIDSIKRKDFLNKNIGTKRKAVKTGKNKLLTDNYITVKRQTEAWNVECGTMKASGNKKKQSGIFEVEITDTSEI
SIO_010081: H0I88_RS01530
subclass of: SO_0000673
so part of: H0I88_RS01530
location: complement(345048..346265)
location: region:345048-346265:-1
so has part: feature:345048-346265:-1:exon

WP_015423236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345048-346265:-1:exon

H0I88_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01535
old locus tag: TGRD_RS05855
so part of: sequence
location: complement(346640..346783)
location: region:346640-346783:-1
so has part: feature:346640-346783:-1:exon
subclass of: SO_0000010

position:346640:-1
position: 346640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346783:-1
position: 346783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346640-346783:-1:exon

H0I88_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01535
old locus tag: TGRD_RS05855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSLHKMSDFIVKASQRRQFEWLIEKHAEIEVSEIAPVNTKNQFFKK
SIO_010081: H0I88_RS01535
subclass of: SO_0000673
so part of: H0I88_RS01535
location: complement(346640..346783)
location: region:346640-346783:-1
so has part: feature:346640-346783:-1:exon

WP_172412813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346640-346783:-1:exon

H0I88_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01540
old locus tag: TGRD_RS01530
old locus tag: TGRD_tRNA15
so part of: sequence
location: 347455..347537
location: region:347455-347537:1
so has part: feature:347455-347537:1:exon
subclass of: SO_0000663

position:347455:1
position: 347455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347537:1
position: 347537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347455-347537:1:exon

H0I88_RS01540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01540
old locus tag: TGRD_RS01530
old locus tag: TGRD_tRNA15
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:347489..347491,aa:Tyr,seq:gta)
SIO_010081: H0I88_RS01540
subclass of: SO_0000673
so part of: H0I88_RS01540
location: 347455..347537
location: region:347455-347537:1
so has part: feature:347455-347537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347455-347537:1:exon

H0I88_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01545
old locus tag: TGRD_RS01535
old locus tag: TGRD_tRNA16
so part of: sequence
location: 347553..347623
location: region:347553-347623:1
so has part: feature:347553-347623:1:exon
subclass of: SO_0000663

position:347553:1
position: 347553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347623:1
position: 347623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347553-347623:1:exon

H0I88_RS01545
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01545
old locus tag: TGRD_RS01535
old locus tag: TGRD_tRNA16
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:347585..347587,aa:Gly,seq:tcc)
SIO_010081: H0I88_RS01545
subclass of: SO_0000673
so part of: H0I88_RS01545
location: 347553..347623
location: region:347553-347623:1
so has part: feature:347553-347623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347553-347623:1:exon

H0I88_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01550
old locus tag: TGRD_RS01540
old locus tag: TGRD_tRNA17
so part of: sequence
location: 347651..347722
location: region:347651-347722:1
so has part: feature:347651-347722:1:exon
subclass of: SO_0000663

position:347651:1
position: 347651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347722:1
position: 347722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347651-347722:1:exon

H0I88_RS01550
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01550
old locus tag: TGRD_RS01540
old locus tag: TGRD_tRNA17
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:347683..347685,aa:Thr,seq:ggt)
SIO_010081: H0I88_RS01550
subclass of: SO_0000673
so part of: H0I88_RS01550
location: 347651..347722
location: region:347651-347722:1
so has part: feature:347651-347722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347651-347722:1:exon

H0I88_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tuf
locus tag: H0I88_RS01555
old locus tag: TGRD_225
old locus tag: TGRD_227
old locus tag: TGRD_RS01545
so part of: sequence
location: 347787..348986
location: region:347787-348986:1
so has part: feature:347787-348986:1:exon
subclass of: SO_0000010

position:347787:1
position: 347787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348986:1
position: 348986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347787-348986:1:exon

H0I88_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tuf
locus tag: H0I88_RS01555
old locus tag: TGRD_225
old locus tag: TGRD_227
old locus tag: TGRD_RS01545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040566.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MGKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKVLGDKGLAKYISYDEVARASESQGRRDASKIVTIAVSHVEYSTVNRHYAHIDCPGHADYVKNMITGAAQMDGAILVVSALDGPMPQTREHILLARQVNVPAVVVFLNKCDAVEDKELLDLVEMEVRDLLTKYNFPGESTPIIRGSALGALEGKQDGVDSIMSLMEAVDNTIPLPARDVDKPFLMSVEDVFSITGRGTVATGRVEKGRVRVGENVDIVGIQETRKSVVTGIEMFRKLLDEAQAGDNIGMLLRGIEKNQVERGQVIAYPGSIKPHKKFRGQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGIAHLPEGVEMVIPGDNVTMDIELIMPVAMETQLRFAIREGGKTVGSGVVTEIVE
SIO_010081: H0I88_RS01555
subclass of: SO_0000673
so part of: H0I88_RS01555
location: 347787..348986
location: region:347787-348986:1
so has part: feature:347787-348986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347787-348986:1:exon

H0I88_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmG
locus tag: H0I88_RS01560
old locus tag: TGRD_226
old locus tag: TGRD_228
old locus tag: TGRD_RS01550
so part of: sequence
location: 349489..349641
location: region:349489-349641:1
so has part: feature:349489-349641:1:exon
subclass of: SO_0000010

position:349489:1
position: 349489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349641:1
position: 349641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349489-349641:1:exon

H0I88_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmG
locus tag: H0I88_RS01560
old locus tag: TGRD_226
old locus tag: TGRD_228
old locus tag: TGRD_RS01550
inference: COORDINATES: protein motif:HMM:TIGR01023.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAERVIITLACSVCKNRNYYFDRAKNHEGKLALKKFCKNCGKRTDHKETK
SIO_010081: H0I88_RS01560
subclass of: SO_0000673
so part of: H0I88_RS01560
location: 349489..349641
location: region:349489-349641:1
so has part: feature:349489-349641:1:exon

WP_015423238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349489-349641:1:exon

H0I88_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01565
old locus tag: TGRD_RS01555
old locus tag: TGRD_tRNA18
so part of: sequence
location: 349656..349726
location: region:349656-349726:1
so has part: feature:349656-349726:1:exon
subclass of: SO_0000663

position:349656:1
position: 349656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349726:1
position: 349726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349656-349726:1:exon

H0I88_RS01565
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01565
old locus tag: TGRD_RS01555
old locus tag: TGRD_tRNA18
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:349688..349690,aa:Trp,seq:cca)
SIO_010081: H0I88_RS01565
subclass of: SO_0000673
so part of: H0I88_RS01565
location: 349656..349726
location: region:349656-349726:1
so has part: feature:349656-349726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349656-349726:1:exon

H0I88_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: secE
locus tag: H0I88_RS01570
old locus tag: TGRD_227
old locus tag: TGRD_229
old locus tag: TGRD_RS01560
so part of: sequence
location: 349756..349944
location: region:349756-349944:1
so has part: feature:349756-349944:1:exon
subclass of: SO_0000010

position:349756:1
position: 349756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349944:1
position: 349944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349756-349944:1:exon

H0I88_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: secE
locus tag: H0I88_RS01570
old locus tag: TGRD_227
old locus tag: TGRD_229
old locus tag: TGRD_RS01560
inference: COORDINATES: protein motif:HMM:NF012793.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MNLIRTSIQFFKESYYELTKVTWLGKKEVVGTTIIVIIFVIIMSIFVSVVDLFLGTVVGIIL
SIO_010081: H0I88_RS01570
subclass of: SO_0000673
so part of: H0I88_RS01570
location: 349756..349944
location: region:349756-349944:1
so has part: feature:349756-349944:1:exon

WP_015423239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349756-349944:1:exon

H0I88_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: nusG
locus tag: H0I88_RS01575
old locus tag: TGRD_228
old locus tag: TGRD_230
old locus tag: TGRD_RS01565
so part of: sequence
location: 349957..350487
location: region:349957-350487:1
so has part: feature:349957-350487:1:exon
subclass of: SO_0000010

position:349957:1
position: 349957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350487:1
position: 350487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349957-350487:1:exon

H0I88_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: nusG
locus tag: H0I88_RS01575
old locus tag: TGRD_228
old locus tag: TGRD_230
old locus tag: TGRD_RS01565
inference: COORDINATES: protein motif:HMM:TIGR00922.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MANQWYVVHVYSGHEYKVKKGLEMTVANLNMQDTISQILVPTEEVIEVKQNKKKIKKRKFYPGYIFVEMTINNSTYWLIRNTAGVTGFLGGVKPIPISQFEVENILNTVANPDTSKPRPAVSFEKEENIRIIEGPFKHFIGIVEEVNHERGKLRVMVTIFGRHTPVELGFLQVEKM
SIO_010081: H0I88_RS01575
subclass of: SO_0000673
so part of: H0I88_RS01575
location: 349957..350487
location: region:349957-350487:1
so has part: feature:349957-350487:1:exon

WP_015423240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349957-350487:1:exon

H0I88_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplK
locus tag: H0I88_RS01580
old locus tag: TGRD_229
old locus tag: TGRD_231
old locus tag: TGRD_RS01570
so part of: sequence
location: 350559..350993
location: region:350559-350993:1
so has part: feature:350559-350993:1:exon
subclass of: SO_0000010

position:350559:1
position: 350559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350993:1
position: 350993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350559-350993:1:exon

H0I88_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplK
locus tag: H0I88_RS01580
old locus tag: TGRD_229
old locus tag: TGRD_231
old locus tag: TGRD_RS01570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MPPKKIKAMIKLQIPAGGANPSPPVGPALGQQGVNIMDFCKQFNERTKSMEQGMTIPAVITVFEDRSFTFITKIPPVPVLIKKAAGVAKASGVPNRNKAGKITATQVEEIAKQKMPDLNANGDLNAAKLMIEGTARSMGIDIVK
SIO_010081: H0I88_RS01580
subclass of: SO_0000673
so part of: H0I88_RS01580
location: 350559..350993
location: region:350559-350993:1
so has part: feature:350559-350993:1:exon

WP_015423241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350559-350993:1:exon

H0I88_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplA
locus tag: H0I88_RS01585
old locus tag: TGRD_230
old locus tag: TGRD_232
old locus tag: TGRD_RS01575
so part of: sequence
location: 351096..351779
location: region:351096-351779:1
so has part: feature:351096-351779:1:exon
subclass of: SO_0000010

position:351096:1
position: 351096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351779:1
position: 351779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351096-351779:1:exon

H0I88_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplA
locus tag: H0I88_RS01585
old locus tag: TGRD_230
old locus tag: TGRD_232
old locus tag: TGRD_RS01575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003225765.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MGKRLSEASKLVDKNMVYKLTEAVILVKETAKAKFDETIEIHIKLGIDPKRSDQMVRGTISIPHGIGRTRKIAVLAKGEKQKEAEAAGADIIGSDDLIEDISKGKLGSGFDVLVATPDVMKDLSRVAKILGPKGLMPNPKSGTVTFEIGKTVEELKKGRVEYKNDSFGIIHVPVGKASFEKEKLENNIKTLLEAVAKAKPLSSKGQYIKSISISSTMGPGIFVEQKI
SIO_010081: H0I88_RS01585
subclass of: SO_0000673
so part of: H0I88_RS01585
location: 351096..351779
location: region:351096-351779:1
so has part: feature:351096-351779:1:exon

WP_015423242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351096-351779:1:exon

H0I88_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01590
old locus tag: TGRD_231
old locus tag: TGRD_233
old locus tag: TGRD_RS01580
so part of: sequence
location: 351858..352313
location: region:351858-352313:1
so has part: feature:351858-352313:1:exon
subclass of: SO_0000010

position:351858:1
position: 351858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352313:1
position: 352313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351858-352313:1:exon

H0I88_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01590
old locus tag: TGRD_231
old locus tag: TGRD_233
old locus tag: TGRD_RS01580
inference: COORDINATES: protein motif:HMM:NF014617.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MRKVQEIEDLLAPVAAREKIEIVDVQYSKKAGDWVARIFIDKDSGVTISDCENISCIFGAFLDESDILKDSYVLEISSPGFKRVLKSEKSFRRFIGSKTRIRTFKPINNQRNFLGTLLNFDDGRIKINDVTNGVVEIEFSDIRKANIEADI
SIO_010081: H0I88_RS01590
subclass of: SO_0000673
so part of: H0I88_RS01590
location: 351858..352313
location: region:351858-352313:1
so has part: feature:351858-352313:1:exon

WP_015423243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351858-352313:1:exon

H0I88_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: nusA
locus tag: H0I88_RS01595
old locus tag: TGRD_232
old locus tag: TGRD_234
old locus tag: TGRD_RS01585
so part of: sequence
location: 352324..353580
location: region:352324-353580:1
so has part: feature:352324-353580:1:exon
subclass of: SO_0000010

position:352324:1
position: 352324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353580:1
position: 353580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352324-353580:1:exon

H0I88_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: nusA
locus tag: H0I88_RS01595
old locus tag: TGRD_232
old locus tag: TGRD_234
old locus tag: TGRD_RS01585
inference: COORDINATES: protein motif:HMM:TIGR01953.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MAEKGELLIALEQIEKDKKIKKEDILVVIENALVSAYKKHVGKNVNVEAKVNPELGEMTASVVKVVVKDVVNPLLEICVQDAKKFDQSVEIGTEVRIPLDTRDFSRIAAQTAKQVIVQKIRESERDSLFDEMKEKIGQIANGAIYRITNRNLIVDLGKTEAILPSSEQVFKEKFSVGQYIKAVIIKVEKSVKGSGVVLSRTSIELVKRLFELEVPEIYEKIVEIVNVVREPGVRTKITVLSHNPKVDPVGACVGVKGARVKPIIDELRGERIDLVSYSVDPAKYIASAMSPAKIVSVTTISEEEKKAEVLVTDDMLFLAIGKNGHNVRLAAKLTGWHIDVKSEGQKKQEGNERIEKQAEVFEKLEGFSERIIKMLVKAGITDVEKLSLLTTEYLITLPGIGHKTAEKIIEVAKNSIRK
SIO_010081: H0I88_RS01595
subclass of: SO_0000673
so part of: H0I88_RS01595
location: 352324..353580
location: region:352324-353580:1
so has part: feature:352324-353580:1:exon

WP_015423244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352324-353580:1:exon

H0I88_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: infB
locus tag: H0I88_RS01600
old locus tag: TGRD_233
old locus tag: TGRD_235
old locus tag: TGRD_RS01590
so part of: sequence
location: 353595..355874
location: region:353595-355874:1
so has part: feature:353595-355874:1:exon
subclass of: SO_0000010

position:353595:1
position: 353595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355874:1
position: 355874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353595-355874:1:exon

H0I88_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: infB
locus tag: H0I88_RS01600
old locus tag: TGRD_233
old locus tag: TGRD_235
old locus tag: TGRD_RS01590
inference: COORDINATES: protein motif:HMM:TIGR00487.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MPSKQGDKVEVSEEKSAKKNTVSSGKTKKVLARKAVKKAAIGVAQKVVKTKVVSKKTELGAKTKFVRTKVGKANSVRKKIIKDVFSEKNDHEEKSEIEKKYDLETVVKEEKATPKKESAIIKGQETVILHSPMSSDATAGYQESKQKPIEPESSVPKTENPKTAIKSTEAKPGTVKDNYKGIILINELITVRELADKMKLMFGDVLKKLLSMGSLATINQRLDTDTAILLAKEFDYDARFTSIYSEEEINSKEDSSKLKQRPPVVTIMGHVDHGKTSLLDAIRSSDVIAGEHGRITQHIGAYKVKVSSGDYIAFLDTPGHEVFTAMRSRGAQATDIVVLVISAADGVMPQTVEAINHAKAANVPIIVAVNKIDLPSSDTQKVRQELSNYGLVPEEWGGDTIMIDISAKQKTNINSLLEMILLKAEMMELKANPDKKAEGVVIEAKLDSRRGPVATLLVQGGTLRVVDNLVIGTTYGKVRAMIDDRGKRFNEAPPSTPVEILGMNEPPHVGDKFIVVDNESQAREITRSRKGKIKEASLKPRHHLSLADINMRQVKDLRIVLKADVQGSLGALSDALERLSTSEISLKIIHMGAGAITESDIALAVASNALVVGFNLRPDTVVEKLAEAEGVSINVYRIIYDLIADVKAAMEGLLDPDVKEKVLGRAVVKQVFRLSSYGIISGCSVTDGQIQRGIKIRLLRNNIIVFEGNISSLKRFKDDVKEVEKGYECGIGLENFSDVKPGDIIENFSIEKIVRKLDN
SIO_010081: H0I88_RS01600
subclass of: SO_0000673
so part of: H0I88_RS01600
location: 353595..355874
location: region:353595-355874:1
so has part: feature:353595-355874:1:exon

WP_015423245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353595-355874:1:exon

H0I88_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rbfA
locus tag: H0I88_RS01605
old locus tag: TGRD_234
old locus tag: TGRD_236
old locus tag: TGRD_RS01595
so part of: sequence
location: 355932..356297
location: region:355932-356297:1
so has part: feature:355932-356297:1:exon
subclass of: SO_0000010

position:355932:1
position: 355932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356297:1
position: 356297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355932-356297:1:exon

H0I88_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rbfA
locus tag: H0I88_RS01605
old locus tag: TGRD_234
old locus tag: TGRD_236
old locus tag: TGRD_RS01595
inference: COORDINATES: protein motif:HMM:TIGR00082.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MPLSYKRSVRVSELIQQTISSIVREMKDLDAGLVTVMGANLTDDLLSCKIYYSVLGSEEYKKKVAGILKRSTKQVRHKLALRLNLRCTPTISFVYDDSNERATKVFDMLQRIEEEKDKCIF
SIO_010081: H0I88_RS01605
subclass of: SO_0000673
so part of: H0I88_RS01605
location: 355932..356297
location: region:355932-356297:1
so has part: feature:355932-356297:1:exon

WP_015423246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355932-356297:1:exon

H0I88_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01610
old locus tag: TGRD_235
old locus tag: TGRD_237
old locus tag: TGRD_RS01600
so part of: sequence
location: 356425..357441
location: region:356425-357441:1
so has part: feature:356425-357441:1:exon
subclass of: SO_0000010

position:356425:1
position: 356425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357441:1
position: 357441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356425-357441:1:exon

H0I88_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01610
old locus tag: TGRD_235
old locus tag: TGRD_237
old locus tag: TGRD_RS01600
EC number: 3.1.3.7
inference: COORDINATES: protein motif:HMM:NF013528.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional oligoribonuclease/PAP phosphatase NrnA
translation: MNLAKNDLKKISEISRIIKQSKIFFIAGHIKPDGDSIGSALALASVLNRLGKEACVYCIDEVPDFLKFLKGSDEIKKSAKKTDVFDCAIILEAINFSRMGDIITPCQSKKVINIDHHLTYTNFGTINYIVPSSSSTAELVLNILDYMKIKLTRGEAENLYAGILTDTGCFQQINTTPNSHIACAKLMKYGIDINEIYKKVYENGSINALKLRGIALCGIKTILDDSVSYIVLTKDMFKKSGAKDNDDSGIINYTLRIEGVKVGCLFKEIDEKTIKVSCRSVRSFNVLEVVGRFGGGGHKNAAGCTIKKGINASIKMISSVLKEKLAADKLLFCSAVFL
SIO_010081: H0I88_RS01610
subclass of: SO_0000673
so part of: H0I88_RS01610
location: 356425..357441
location: region:356425-357441:1
so has part: feature:356425-357441:1:exon

WP_015423247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356425-357441:1:exon

H0I88_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: truB
locus tag: H0I88_RS01615
old locus tag: TGRD_236
old locus tag: TGRD_238
old locus tag: TGRD_RS01605
so part of: sequence
location: 357533..358225
location: region:357533-358225:1
so has part: feature:357533-358225:1:exon
subclass of: SO_0000010

position:357533:1
position: 357533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358225:1
position: 358225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357533-358225:1:exon

H0I88_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: truB
locus tag: H0I88_RS01615
old locus tag: TGRD_236
old locus tag: TGRD_238
old locus tag: TGRD_RS01605
EC number: 5.4.99.25
inference: COORDINATES: protein motif:HMM:TIGR00431.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MSQSYNNIDGLLLLDKPFGITSFDAVYKIKKVLNVEKTGHCGTLDPASTGLLLVLMGKATKLQAKFMKKDKVYLSSFLLGMVTDSGDLDGKVISENSVLNINIEKIKKMVEMFEGEIFQIPPMYSALKYNGKKLCELARQGIEVERKPRKVTIKKFEVLSYDGDIVKVRIECSSGTYIRTLAQDLGNVLKCGATVKTLRREKIDIFDIKDALRFKDTDSADKIIKKLIPL
SIO_010081: H0I88_RS01615
subclass of: SO_0000673
so part of: H0I88_RS01615
location: 357533..358225
location: region:357533-358225:1
so has part: feature:357533-358225:1:exon

WP_015423248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357533-358225:1:exon

H0I88_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ribF
locus tag: H0I88_RS01620
old locus tag: TGRD_237
old locus tag: TGRD_239
old locus tag: TGRD_RS01610
so part of: sequence
location: 358272..359189
location: region:358272-359189:1
so has part: feature:358272-359189:1:exon
subclass of: SO_0000010

position:358272:1
position: 358272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359189:1
position: 359189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358272-359189:1:exon

H0I88_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: ribF
locus tag: H0I88_RS01620
old locus tag: TGRD_237
old locus tag: TGRD_239
old locus tag: TGRD_RS01610
EC number: 2.7.1.26
EC number: 2.7.7.2
inference: COORDINATES: protein motif:HMM:TIGR00083.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO process: GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: riboflavin biosynthesis protein RibF
translation: MLKGKDFGIKFNRCEMTKKSVVAIGTFDGMHKGHRLLIDKILSSARKNNLRSVIIVLEKPVKKVRGLLTTYEEKIEKIKFSGADEIFVIGVPSEILSCCPEEFFDEFLHKMLNVSEIMCGIDFAFGKDGKGNIEWLKKKAKEKNIKINIVKPLKNISSSYIRILIEKDDVKNAASLLGRNYSFTGIPFKEKGEGKKLGFPTVNLHVNSDKLLPKGVYISLISQGERIYPSLTNIGIRSTFDRGNKIVPETYILDFKGEWKKLQTKVMFLKKIRNEKKFASVDALKIQISKDLLAALRFFNYHKTK
SIO_010081: H0I88_RS01620
subclass of: SO_0000673
so part of: H0I88_RS01620
location: 358272..359189
location: region:358272-359189:1
so has part: feature:358272-359189:1:exon

WP_015423249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358272-359189:1:exon

H0I88_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01625
old locus tag: TGRD_238
old locus tag: TGRD_240
old locus tag: TGRD_RS01615
so part of: sequence
location: 359485..359832
location: region:359485-359832:1
so has part: feature:359485-359832:1:exon
subclass of: SO_0000010

position:359485:1
position: 359485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359832:1
position: 359832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359485-359832:1:exon

H0I88_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01625
old locus tag: TGRD_238
old locus tag: TGRD_240
old locus tag: TGRD_RS01615
inference: COORDINATES: protein motif:HMM:NF023395.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine triad nucleotide-binding protein
translation: MSENCLFCKITKGEIPSYKVYEDEKVFAFRDINPQAPVHILIIPKKHIGGLNTASEEDERILGNIQIIVSKIAKQFSEMGNGFRLVNNCGADGGQTVFHIHYHLLGGRVFGWPPG
SIO_010081: H0I88_RS01625
subclass of: SO_0000673
so part of: H0I88_RS01625
location: 359485..359832
location: region:359485-359832:1
so has part: feature:359485-359832:1:exon

WP_015423250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359485-359832:1:exon

H0I88_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsU
locus tag: H0I88_RS01630
old locus tag: TGRD_239
old locus tag: TGRD_241
old locus tag: TGRD_RS01620
so part of: sequence
location: 359874..360080
location: region:359874-360080:1
so has part: feature:359874-360080:1:exon
subclass of: SO_0000010

position:359874:1
position: 359874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360080:1
position: 360080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359874-360080:1:exon

H0I88_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsU
locus tag: H0I88_RS01630
old locus tag: TGRD_239
old locus tag: TGRD_241
old locus tag: TGRD_RS01620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808376.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MVSVKVREGESIEEAIRRFKRECERNGVMQEIKKREFYKTPSILKKEKLAETKRKIRRKMFKDSKWSK
SIO_010081: H0I88_RS01630
subclass of: SO_0000673
so part of: H0I88_RS01630
location: 359874..360080
location: region:359874-360080:1
so has part: feature:359874-360080:1:exon

WP_015423251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359874-360080:1:exon

H0I88_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01635
old locus tag: TGRD_240
old locus tag: TGRD_242
old locus tag: TGRD_RS01625
so part of: sequence
location: 360154..361113
location: region:360154-361113:1
so has part: feature:360154-361113:1:exon
subclass of: SO_0000010

position:360154:1
position: 360154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361113:1
position: 361113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360154-361113:1:exon

H0I88_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01635
old locus tag: TGRD_240
old locus tag: TGRD_242
old locus tag: TGRD_RS01625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: NIF3 domain protein
translation: MKLKDIHDLFIKEGIKADPRGLNIVELDLLKRKEEYDDLSDKKKENYDIESLTNPYYDSRILYGDENTEVKTVMVGIDIESQEILLAKQLINSGTKIDLIIAHHPEGYAYSTFYGVLEMQTDILNKQGVPINITEKIVSQRIKEVQRSVLPQNSERVYDAAKLLNIPLMTAHSVADNHVATFLQNEINVLSPTYLKTIIELLNKYPEYKHASKIGHKPFILNGSDYSHCGKVFVDMTGGTEGPLESFEKLEAAGVGTIISMHLSRKAVKEAEKHHLNIILAGHISSDNLGLNLLFDKLKKKALEKFEFIECSGFRRFGR
SIO_010081: H0I88_RS01635
subclass of: SO_0000673
so part of: H0I88_RS01635
location: 360154..361113
location: region:360154-361113:1
so has part: feature:360154-361113:1:exon

WP_015423252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360154-361113:1:exon

H0I88_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaG
locus tag: H0I88_RS01640
old locus tag: TGRD_241
old locus tag: TGRD_243
old locus tag: TGRD_RS01630
so part of: sequence
location: 361083..362882
location: region:361083-362882:1
so has part: feature:361083-362882:1:exon
subclass of: SO_0000010

position:361083:1
position: 361083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362882:1
position: 362882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361083-362882:1:exon

H0I88_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaG
locus tag: H0I88_RS01640
old locus tag: TGRD_241
old locus tag: TGRD_243
old locus tag: TGRD_RS01630
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MLWFQKVWKIEMVISEDTIEKIRLSNSIDSVIREYLPDLKRAGRNWKVCCPFHNEKTPSFIVSPEKGIFKCFSCNVAGDVFKFVMFLDNISWIEAVKKLAKKTNIEIQEAKQGIIKLSENTKLFDILESSANFYNKCLLERASAQKAREYIKKRGINREAVNKFKIGFAPKGQFLQWALEKDYKDDDLLKAGLITRTGRGIFFECMSERVVFPIFDVQGRIVAFGGRTIADHKIKYLNTPETAVYSKSSNLYGLFQTLPELRKERKIIVLEGYIDAVILQQFGITGAVATLGTAFTQNHAKLVSRYSDSVTLLFDSDNAGRTAAQRSLEILVGDSIECRVSALPEHVDADEYLNQYGKESFLKFLEDSSKSAIDFMIERVLGGLSSDGRKSSPEIKAKAVSALLDFVARSTNSIIQREWIRDIAQHVDVNEEAVWREFEKKQQLRLRGYLQYDKNSVEQTVKVKKDKKFSMSLEENLLNLILNNRDYIKKTDSNCFEDARCRKIFELTVSGLNTVGILNTLSEEDKNWFAELILNTIEYSDIGEAFGIILRDIDAGRLERERRRLEKEILLVSEGKKEKDKKVFDEYKKLTALLKGSGK
SIO_010081: H0I88_RS01640
subclass of: SO_0000673
so part of: H0I88_RS01640
location: 361083..362882
location: region:361083-362882:1
so has part: feature:361083-362882:1:exon

WP_095558701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361083-362882:1:exon

H0I88_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01645
old locus tag: TGRD_242
old locus tag: TGRD_244
old locus tag: TGRD_RS01635
so part of: sequence
location: 362884..364605
location: region:362884-364605:1
so has part: feature:362884-364605:1:exon
subclass of: SO_0000010

position:362884:1
position: 362884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364605:1
position: 364605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362884-364605:1:exon

H0I88_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01645
old locus tag: TGRD_242
old locus tag: TGRD_244
old locus tag: TGRD_RS01635
inference: COORDINATES: protein motif:HMM:TIGR02937.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MGKKDLFKGLIDTGKEQGYLTYEAISKNLPQRSMIAEEIDGFFVTLDNLGIKVLDNREYRSDKVKKSRGEVVERSMKTVNEEDINPVRMYLSEMAKVPLLERNMELKLVKSIRENEDRLKSIVLESPLIIKEIRNWETLISQQEMTTKELMPRGRKSKAQLIGMGLKIKIVVKKINRIEKNINTYEKKLKLKSISCKDKEQYKEKVKEFRSEIVSLIVELNLNQDKIRRLINKIKTIAQKLNEIKEGLRRFERKYKNSFSKVQVLFKSCNLGKISSAEFKKSTGLSMKDVAEDIANVKTLLVKQTNLKDGFVITPEEMIETDRRIRELEYVIHRDKMKLIEANFRLVVSIAKKHVGISNLELSDLIQEGNLGLSKAVEKFEWKRGFKFSTYATWWIRQSINRAIADQARTIRIPVHMKELISKLTKSKKECQQNMGREPTIQEYSKILKLSCDRIRRILKMMQEPVSLAMPVGEEEDSRLEDFIEDQNSPNPVVKTQQYRLQLELEKVLATLAPREAEIIRLRYGIGIGYPSTLEEVGKKFGITRERVRQIEAKAIRKLKYPRRNKSLREYLD
SIO_010081: H0I88_RS01645
subclass of: SO_0000673
so part of: H0I88_RS01645
location: 362884..364605
location: region:362884-364605:1
so has part: feature:362884-364605:1:exon

WP_015423254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362884-364605:1:exon

H0I88_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01650
old locus tag: TGRD_243
old locus tag: TGRD_245
old locus tag: TGRD_RS01640
so part of: sequence
location: complement(364687..365436)
location: region:364687-365436:-1
so has part: feature:364687-365436:-1:exon
subclass of: SO_0000010

position:364687:-1
position: 364687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365436:-1
position: 365436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364687-365436:-1:exon

H0I88_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01650
old locus tag: TGRD_243
old locus tag: TGRD_245
old locus tag: TGRD_RS01640
inference: COORDINATES: protein motif:HMM:NF014794.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent enzyme
translation: MKKILSKPESLKDAVLSYCSGCGHGIIHRLVAECIDELVVREKTIAVAPVGCAVFAYDYFNFDVTEAPHGRPPAVATGIKRTNPDKFVFTYQGDGDIAAIGMAETIHAANRGENITILFVNNANYGMTGGQMAPTTLIGQVTETTPFGRNPEREGYPIKLCELLSTLEGTTYLERVAIYNPRNIIKAKKAIKKAFQCQIDGKGFSLVEVISNCPVDWGMTPLDSIKWVEETFIKSFPLRTVKDKINSDI
SIO_010081: H0I88_RS01650
subclass of: SO_0000673
so part of: H0I88_RS01650
location: complement(364687..365436)
location: region:364687-365436:-1
so has part: feature:364687-365436:-1:exon

WP_015423255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364687-365436:-1:exon

H0I88_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01655
old locus tag: TGRD_244
old locus tag: TGRD_246
old locus tag: TGRD_RS01645
so part of: sequence
location: complement(365582..366643)
location: region:365582-366643:-1
so has part: feature:365582-366643:-1:exon
subclass of: SO_0000010

position:365582:-1
position: 365582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366643:-1
position: 366643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365582-366643:-1:exon

H0I88_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01655
old locus tag: TGRD_244
old locus tag: TGRD_246
old locus tag: TGRD_RS01645
inference: COORDINATES: protein motif:HMM:NF005507.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate dehydrogenase subunit VorB
translation: MTKKLVKGNIALCEGAITAGLKSYFGYPITPQNEIPSYFSRKMVELGRVFIQAESEIAAANMVLGAAATGTRAMTSSSSPGISLKQETISYMAGMQVPALIVNVQRGGPGLGNISSSQSDYFQAVKGGGHGDYKIIVIAPNSAQEMYETAYDAFDLAEKYRTPVMILADGIIGQMMEPIEFNRPEKKEFKEKEWILNGCKGREPRSIKSLLMKDGVLEKHNVKLQEKYKLISENEVKYELYMIEDAEIIITAYGISSRIVKSAVKLARKNGIKAGLLRPKTLWPFPSKIISSFAKPNIKFLSVELSYGQMVEDVKLAVNGKSNVEFLGKAGGGLVTEQEIIKKIQSKVCSIFL
SIO_010081: H0I88_RS01655
subclass of: SO_0000673
so part of: H0I88_RS01655
location: complement(365582..366643)
location: region:365582-366643:-1
so has part: feature:365582-366643:-1:exon

WP_015423256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365582-366643:-1:exon

H0I88_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01660
old locus tag: TGRD_245
old locus tag: TGRD_247
old locus tag: TGRD_RS01650
so part of: sequence
location: complement(366640..366852)
location: region:366640-366852:-1
so has part: feature:366640-366852:-1:exon
subclass of: SO_0000010

position:366640:-1
position: 366640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366852:-1
position: 366852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366640-366852:-1:exon

H0I88_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01660
old locus tag: TGRD_245
old locus tag: TGRD_247
old locus tag: TGRD_RS01650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009120596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MISTIKINSEKCKGCSLCIKACPKQCISLSKQFNKAGYHWAVLEKENSCIGCGFCYMVCPDVCIEVYKDL
SIO_010081: H0I88_RS01660
subclass of: SO_0000673
so part of: H0I88_RS01660
location: complement(366640..366852)
location: region:366640-366852:-1
so has part: feature:366640-366852:-1:exon

WP_015423257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366640-366852:-1:exon

H0I88_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01665
old locus tag: TGRD_246
old locus tag: TGRD_RS01655
so part of: sequence
location: 367018..367656
location: region:367018-367656:1
so has part: feature:367018-367656:1:exon
subclass of: SO_0000010

position:367018:1
position: 367018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367656:1
position: 367656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367018-367656:1:exon

H0I88_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01665
old locus tag: TGRD_246
old locus tag: TGRD_RS01655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase family protein
translation: MLAIHPFKPFVPQGATTLIIGTFPPLAQYQDFKFYYPNNTGSRFWIIMEYVFNHKFQYWKDDPAAEERKALFEREHIAITDMIEKCIRTNGNSSDKNLSEIEFRNVYKLLKDRPAIQKVILTSRTDGDSERIHKKHLGKSRNNSALELLNEHLMGNEITIRNLHKEDNGLIKGEFELNNKIIRIFVPYTPSARWYNSHKGKVNDMYKDSFDA
SIO_010081: H0I88_RS01665
subclass of: SO_0000673
so part of: H0I88_RS01665
location: 367018..367656
location: region:367018-367656:1
so has part: feature:367018-367656:1:exon

WP_095558702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367018-367656:1:exon

H0I88_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01670
old locus tag: TGRD_RS01660
old locus tag: TGRD_tRNA19
so part of: sequence
location: 367929..368001
location: region:367929-368001:1
so has part: feature:367929-368001:1:exon
subclass of: SO_0000663

position:367929:1
position: 367929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368001:1
position: 368001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367929-368001:1:exon

H0I88_RS01670
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01670
old locus tag: TGRD_RS01660
old locus tag: TGRD_tRNA19
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:367962..367964,aa:Gln,seq:ctg)
SIO_010081: H0I88_RS01670
subclass of: SO_0000673
so part of: H0I88_RS01670
location: 367929..368001
location: region:367929-368001:1
so has part: feature:367929-368001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367929-368001:1:exon

H0I88_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01675
old locus tag: TGRD_RS01665
pseudo: true
so part of: sequence
location: <368739..368978
location: region:368739-368978:1
so has part: feature:368739-368978:1:exon
subclass of: SO_0000010

position:368739:1
position: 368739
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:368978:1
position: 368978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368739-368978:1:exon

H0I88_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01675
old locus tag: TGRD_RS01665
inference: COORDINATES: protein motif:HMM:NF012905.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HAD hydrolase-like protein
SIO_010081: H0I88_RS01675
subclass of: SO_0000673
so part of: H0I88_RS01675
location: <368739..368978
location: region:368739-368978:1
so has part: feature:368739-368978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368739-368978:1:exon

H0I88_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01680
old locus tag: TGRD_247
old locus tag: TGRD_248
old locus tag: TGRD_RS01670
so part of: sequence
location: complement(369213..369704)
location: region:369213-369704:-1
so has part: feature:369213-369704:-1:exon
subclass of: SO_0000010

position:369213:-1
position: 369213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369704:-1
position: 369704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369213-369704:-1:exon

H0I88_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01680
old locus tag: TGRD_247
old locus tag: TGRD_248
old locus tag: TGRD_RS01670
inference: COORDINATES: protein motif:HMM:NF025793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCMP deaminase family protein
translation: MEKTTVRSRPSWDEYFMKLAWLVSERSTCVRHHVGAVIVRDKRILTTGYNGAATDMQDCISLGCLRNTLNILSGQRHEICRAIHAEQNAIIQGGYHGINIKDSTLYCTHSPCVLCAKITVNAGIKRVIANIEYPDNTFKELFSVTGIEFSTLQLDNFSINRLL
SIO_010081: H0I88_RS01680
subclass of: SO_0000673
so part of: H0I88_RS01680
location: complement(369213..369704)
location: region:369213-369704:-1
so has part: feature:369213-369704:-1:exon

WP_015423258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369213-369704:-1:exon

H0I88_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01685
old locus tag: TGRD_248
old locus tag: TGRD_249
old locus tag: TGRD_RS01675
so part of: sequence
location: 369813..370658
location: region:369813-370658:1
so has part: feature:369813-370658:1:exon
subclass of: SO_0000010

position:369813:1
position: 369813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370658:1
position: 370658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369813-370658:1:exon

H0I88_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01685
old locus tag: TGRD_248
old locus tag: TGRD_249
old locus tag: TGRD_RS01675
EC number: 6.1.1.14
inference: COORDINATES: protein motif:HMM:TIGR00388.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MNFQGIIMALQKFWAKKGCLICQSYDLEKGAGTFNPATFLRSLGPRPWNAAYVEPSRRPADGRYGENPNRLQHYYQFQVIMKPAPQNIQRIYLESLKTVGLDPKKHDIRFIEDDWESPTLGAWGLGWEVWIDGMEATQFTYFQQVGGINLNPVSVEITYGTERLAMYVQKKNSVYDLQWNDEVTYGDVHLEDERQWSFYNFEKVDVDMLKKHFDEWEREAERLAGTHLPVPAYDAVMKCSHLFNLLDARGAISVSERMDYVLRVRTIAGIVAEEYLNSNSV
SIO_010081: H0I88_RS01685
subclass of: SO_0000673
so part of: H0I88_RS01685
location: 369813..370658
location: region:369813-370658:1
so has part: feature:369813-370658:1:exon

WP_015423259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369813-370658:1:exon

H0I88_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: glyS
locus tag: H0I88_RS01690
old locus tag: TGRD_249
old locus tag: TGRD_250
old locus tag: TGRD_RS01680
so part of: sequence
location: 370729..372843
location: region:370729-372843:1
so has part: feature:370729-372843:1:exon
subclass of: SO_0000010

position:370729:1
position: 370729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372843:1
position: 372843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370729-372843:1:exon

H0I88_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: glyS
locus tag: H0I88_RS01690
old locus tag: TGRD_249
old locus tag: TGRD_250
old locus tag: TGRD_RS01680
EC number: 6.1.1.14
inference: COORDINATES: protein motif:HMM:TIGR00211.2
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MVDGNIKNALLEIGAEEIPSSYIEPALKQIEDYALKAFNTSGLKHGVLKTYATPRRLVLIVENLEEKSDDKTEEVLGPSLNAAKDAHGKYTRAAVGFALKNGVIPEKLAVKTTEKGDYLFFVKKIKGEKTEKLLVAIFPEIIKNISFPKIMIWEESGFKFARPVRNIVALYGKKVIKFKIADVNSSNWTVGLHTYDNSRIKIDLPEKYLLAMKNKSVIVDQNERREEIKRSIKYAAENIGSVIPDEELVDKVNYLVEYPSAVLCAFNRKYLDLPQEILTVCMRKSQKSFAINDENGKFSNYFISVKNGVSKYQETAKEGYEKVVAARLADAEFFYSNDLKKGLGINIEKLKGIVFHKEIGTVYEKIERIKQIATLFNEEFDMRIDGSALERAVMLSKVDLTSEMVFEYPELQGVMGRIYALKSGENADVASSVEQHYWPLVTSGKLPLHPMASLLSLADKIDTLTAFFSIGLEPSGSADPYGVKRAGTGFVKVAMNELPKCDLTGVVGRVFEFLPENVKNNPKSKDACERLIKFFWQRIENIFESEGYNSDEVKAVINAVGINKLKYIGSLRTKLEALRNADREGDFSFVVAIFKRINNIISQAKKQNIGISGVVNEDLLAENAEKALYTAAKKAKAEIENCVSANEYGRVFGKVSEIKPAIDSFFEKVMVMAEDETIKLNRVSLLSYIKNMFAGFVDFSVLRR
SIO_010081: H0I88_RS01690
subclass of: SO_0000673
so part of: H0I88_RS01690
location: 370729..372843
location: region:370729-372843:1
so has part: feature:370729-372843:1:exon

WP_015423260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370729-372843:1:exon

H0I88_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: thrS
locus tag: H0I88_RS01695
old locus tag: TGRD_250
old locus tag: TGRD_251
old locus tag: TGRD_RS01685
so part of: sequence
location: 372918..374714
location: region:372918-374714:1
so has part: feature:372918-374714:1:exon
subclass of: SO_0000010

position:372918:1
position: 372918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374714:1
position: 374714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372918-374714:1:exon

H0I88_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: thrS
locus tag: H0I88_RS01695
old locus tag: TGRD_250
old locus tag: TGRD_251
old locus tag: TGRD_RS01685
EC number: 6.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00418.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MLTQRKKKDFEYKKYCIIEQMEKQKSLDILRHSTAHIMAAAVMELFPGTKVAIGPSIEDGFYYDFDREQAFTPGDLIRIEEKMAEIIKADYPFICSYVPKGEAVKEFREKGEKYKAEIASQIEDDKVSMYRSGNFTDLCRGPHINSTGELKYFKLLSIAGAYWRGDSSREQLQRIYGTAFLTKKDIDDYLTGIEEAHKRDHRKLGEDLDLFSIDETVGGGLVLWHPKGALLKDIIENYWKKFHLENGYDLLSTPHIASEELFKVSGHLQTYSENMYASMEIEGKPYRIKPMNCPMHLMIYKTKLHSYRELPVRYAELGTVYRFEKSGVLHGLLRVRGFTQDDGHIIVAPEQLEEEMLGVFNMAVNCLKTFGFNEYKIYFATRPEKKYVGEIEYWEKAQNSIENALKKTGCVYEIDEGGGAFYGPKIDIKIKDVIGRLWQCSTLQFDFNLPERFDIFYVNSSGKKARPYMIHRALLGSLERFIGVLLEHYAGALPLWLSPIQVAVANINEEQRGFCEGLSQELKKNNIRVIFDGRNEKIGRKIRENAMQKIPYIAVIGNKEKDACAVAVRARGNRDLGVMSVDNFISFVKEESVCTSGL
SIO_010081: H0I88_RS01695
subclass of: SO_0000673
so part of: H0I88_RS01695
location: 372918..374714
location: region:372918-374714:1
so has part: feature:372918-374714:1:exon

WP_015423261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372918-374714:1:exon

H0I88_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01700
old locus tag: TGRD_RS05860
so part of: sequence
location: 374696..374845
location: region:374696-374845:1
so has part: feature:374696-374845:1:exon
subclass of: SO_0000010

position:374696:1
position: 374696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374845:1
position: 374845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374696-374845:1:exon

H0I88_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01700
old locus tag: TGRD_RS05860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHKWIVNLSLCIYKNDILKHIDKIKINSFLEMKSSKKEIDGILEKNKTA
SIO_010081: H0I88_RS01700
subclass of: SO_0000673
so part of: H0I88_RS01700
location: 374696..374845
location: region:374696-374845:1
so has part: feature:374696-374845:1:exon

WP_158302774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374696-374845:1:exon

H0I88_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01705
old locus tag: TGRD_RS01690
so part of: sequence
location: 375171..375368
location: region:375171-375368:1
so has part: feature:375171-375368:1:exon
subclass of: SO_0000010

position:375171:1
position: 375171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375368:1
position: 375368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375171-375368:1:exon

H0I88_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01705
old locus tag: TGRD_RS01690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVRYSADYKGNKIKRVNESLADFKNFKKLKEASISTYYRYSRKLHIVDAKRSDTDNRLDAIQCV
SIO_010081: H0I88_RS01705
subclass of: SO_0000673
so part of: H0I88_RS01705
location: 375171..375368
location: region:375171-375368:1
so has part: feature:375171-375368:1:exon

WP_095558704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375171-375368:1:exon

H0I88_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01710
old locus tag: TGRD_RS01695
so part of: sequence
location: 375457..375735
location: region:375457-375735:1
so has part: feature:375457-375735:1:exon
subclass of: SO_0000010

position:375457:1
position: 375457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375735:1
position: 375735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375457-375735:1:exon

H0I88_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01710
old locus tag: TGRD_RS01695
inference: COORDINATES: protein motif:HMM:NF018651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKVCVVCPHTILDPCIEPARGSVYASNTEYLFVDEEFKKLVAVSYTGMIMSTRETADMKDILVSLGVTQINAESRVIPGGYEAEGTPPHSG
SIO_010081: H0I88_RS01710
subclass of: SO_0000673
so part of: H0I88_RS01710
location: 375457..375735
location: region:375457-375735:1
so has part: feature:375457-375735:1:exon

WP_095558705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375457-375735:1:exon

H0I88_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01715
old locus tag: TGRD_RS01700
so part of: sequence
location: 375810..376031
location: region:375810-376031:1
so has part: feature:375810-376031:1:exon
subclass of: SO_0000010

position:375810:1
position: 375810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376031:1
position: 376031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375810-376031:1:exon

H0I88_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01715
old locus tag: TGRD_RS01700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSFCAACYRKNRLDEYFVDFAKPELKELGYSLIEGYKTKLDKAGTYDTGEVFQQYKSQSTGLVCLISILYIP
SIO_010081: H0I88_RS01715
subclass of: SO_0000673
so part of: H0I88_RS01715
location: 375810..376031
location: region:375810-376031:1
so has part: feature:375810-376031:1:exon

WP_095558706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375810-376031:1:exon

H0I88_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01725
old locus tag: TGRD_RS01705
old locus tag: TGRD_tRNA20
so part of: sequence
location: 377566..377638
location: region:377566-377638:1
so has part: feature:377566-377638:1:exon
subclass of: SO_0000663

position:377566:1
position: 377566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377638:1
position: 377638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377566-377638:1:exon

H0I88_RS01725
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01725
old locus tag: TGRD_RS01705
old locus tag: TGRD_tRNA20
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:377599..377601,aa:Lys,seq:ctt)
SIO_010081: H0I88_RS01725
subclass of: SO_0000673
so part of: H0I88_RS01725
location: 377566..377638
location: region:377566-377638:1
so has part: feature:377566-377638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377566-377638:1:exon

H0I88_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01730
old locus tag: TGRD_RS01710
old locus tag: TGRD_tRNA21
so part of: sequence
location: 377646..377727
location: region:377646-377727:1
so has part: feature:377646-377727:1:exon
subclass of: SO_0000663

position:377646:1
position: 377646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377727:1
position: 377727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377646-377727:1:exon

H0I88_RS01730
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01730
old locus tag: TGRD_RS01710
old locus tag: TGRD_tRNA21
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:377680..377682,aa:Leu,seq:tag)
SIO_010081: H0I88_RS01730
subclass of: SO_0000673
so part of: H0I88_RS01730
location: 377646..377727
location: region:377646-377727:1
so has part: feature:377646-377727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377646-377727:1:exon

H0I88_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tig
locus tag: H0I88_RS01735
old locus tag: TGRD_251
old locus tag: TGRD_252
old locus tag: TGRD_RS01715
so part of: sequence
location: 378059..379399
location: region:378059-379399:1
so has part: feature:378059-379399:1:exon
subclass of: SO_0000010

position:378059:1
position: 378059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379399:1
position: 379399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378059-379399:1:exon

H0I88_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tig
locus tag: H0I88_RS01735
old locus tag: TGRD_251
old locus tag: TGRD_252
old locus tag: TGRD_RS01715
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:TIGR00115.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MSLENKTIDFKSAVVGEKLCSVTMDVEVSENIAADEIESAFSRIRRQAKIDGFRHGKVPMNIIRQKFAGEAKDRAVESIIKKTVLDALKKEEFVSIGFPVIEEFDYEVGQTLKYRFTAERHPKIEVKDYKGIPLKKEIFKITDKSLEQNLEVLRKRNAKLVPSKSDKVTEKSFVSIDYDAFDAYGKELPEIRAKNYVIDLNSENTVKEFKKALSGLKIGAERDIKIEYPSDYSSEILAGKTVTFKIKVIEIKEKEIPDLNDDFAKDMGIENLGNLKTKVKEIVETEEKRRQDMDIKRQIIEYLLEKNKFEVPQSLVTENKKSLVEKMKNYMKRQGASEEYVKKQVELEQKKLKEEAENKIRLSYILNAIFKDENLAMTDADIEEEKSKMKTSNPGMENAVDKYFAEKKENIMLSLKGQKLFGFLLASANVETEEKDMLLKKDENEK
SIO_010081: H0I88_RS01735
subclass of: SO_0000673
so part of: H0I88_RS01735
location: 378059..379399
location: region:378059-379399:1
so has part: feature:378059-379399:1:exon

WP_015423262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378059-379399:1:exon

H0I88_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01740
old locus tag: TGRD_252
old locus tag: TGRD_253
old locus tag: TGRD_RS01720
so part of: sequence
location: 379485..380096
location: region:379485-380096:1
so has part: feature:379485-380096:1:exon
subclass of: SO_0000010

position:379485:1
position: 379485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380096:1
position: 380096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379485-380096:1:exon

H0I88_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01740
old locus tag: TGRD_252
old locus tag: TGRD_253
old locus tag: TGRD_RS01720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010744464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease proteolytic subunit
translation: MPLLIPTVIERWNQGAAVTYDLYSRLLKDRIIFVGGQDGAVTTDSANVLIAQLLYLDSEDQGKDISLYINSPGGMVSAGLAVYDTMQFIKSPITTICMGMAMSFGAVLLAAGTKGKRYALTHSRIMIHQPLIYGGGLSGTVSDIDIEAKELVSTKQKLSGIIAEHTGKTSERVLKDTDRNCYMSAQEAKEYGLIDEVIVNLKQ
SIO_010081: H0I88_RS01740
subclass of: SO_0000673
so part of: H0I88_RS01740
location: 379485..380096
location: region:379485-380096:1
so has part: feature:379485-380096:1:exon

WP_015423263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379485-380096:1:exon

H0I88_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: clpX
locus tag: H0I88_RS01745
old locus tag: TGRD_253
old locus tag: TGRD_254
old locus tag: TGRD_RS01725
so part of: sequence
location: 380130..381392
location: region:380130-381392:1
so has part: feature:380130-381392:1:exon
subclass of: SO_0000010

position:380130:1
position: 380130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381392:1
position: 381392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380130-381392:1:exon

H0I88_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: clpX
locus tag: H0I88_RS01745
old locus tag: TGRD_253
old locus tag: TGRD_254
old locus tag: TGRD_RS01725
inference: COORDINATES: protein motif:HMM:NF003745.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MAAESVNIMGIDFSEKCCIFCNKGYPYKLVGTSGVYICEECAKHSLELFENLNKKESKETMLRLPKPGELKRFLDAYVIGQEHAKKILSVAVYNHYKRLEAIVSKDDVELQKSNVLLIGPTGAGKTLLAQTLAKILDVPFAISDATVLTEAGYVGEDVENILLRLIQNASFDIRKAEKGIIYIDEIDKISRKSDTPSITRDVSGEGVQQALLKILEGTIANISPQGGRKHPQQEYLKIDTTNILFICGGAFDGLEKIIEKRLSKKTLGFITDGSNNRNDFKNMDYTLSRVESEDLIKFGLIPEFIGRVPVISALNHLSTSDLVHILTEPKNALIKQYQKMFQFENVELKFEREALEKIAEEALKRGSGARGLRSIIENILLDAMFDIPDNTSVVKSIVMAETVTRREKPKFVYKGTKETA
SIO_010081: H0I88_RS01745
subclass of: SO_0000673
so part of: H0I88_RS01745
location: 380130..381392
location: region:380130-381392:1
so has part: feature:380130-381392:1:exon

WP_269763547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380130-381392:1:exon

H0I88_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: lon
locus tag: H0I88_RS01750
old locus tag: TGRD_254
old locus tag: TGRD_255
old locus tag: TGRD_RS01730
so part of: sequence
location: 381389..383797
location: region:381389-383797:1
so has part: feature:381389-383797:1:exon
subclass of: SO_0000010

position:381389:1
position: 381389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383797:1
position: 383797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381389-383797:1:exon

H0I88_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: lon
locus tag: H0I88_RS01750
old locus tag: TGRD_254
old locus tag: TGRD_255
old locus tag: TGRD_RS01730
EC number: 3.4.21.53
inference: COORDINATES: protein motif:HMM:NF008053.0
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MSELDRFSNDKNEMPKIPDVLPLLPVRDIILYPAMVLPLAVGREKSIKALEESMSTNRLVFIVTQKNIQIEDPTPKDVYNIGTICEVLQMLKMPDGTLKALVEGISRAQWTDFKLSDKGYIEVGLKVFDENTLKMPEVEAIMRQTIALFEQYVKLNPRIPIDISVSVSNIADPARLADTIASHLVIKNNDKQTILELVDPVKRLEKIIQILNAEIEILNIERRIQNRVRNQIEKTQKEYYLTEQMKAIQKELKQKDEAQKDLDDLKGKLKKTKMPQAAKSAADKEMSRLEKMMPMSPEATVIRTYLEWILDLPWEKSTIDNLDLNRAKEVLDQDHYGLEKVKDRVLEYLAVLSRVQKIKGPILCFIGPPGVGKTSIAKSVARSLGRNFVRISMGGVKDEAEIRGHRRTYIGSMPGKIIQSIKKAGSNNPVFILDEIDKIGSDWRGDPSSALLEVLDPEQNYTFNDHYLDVDFDLSNVMFITTANTLNNIPVTLFDRLELIRFSSYTDVEKRHIAEDFIVPKQLKEHGLKPEEFIFDDGALDIVIKNYTHEAGVRNLTREIANLCRKVVKGLEFNKELKSITIKPENLNKYLGIAYYERERIAENDVGVATGLAWTEVGGETLTIEVNKMGGKNSLVLTGKLGDVMKESAQAALTYVRSSSQKLKIDENMFSNTDFHVHVPEGAVPKDGPSAGIALATALASVCMNKPIKKKIAMTGEVTLRGRVLSIGGLKEKVLAAYREGITMILFPESNKKDLVDIPEDVIKKLQMIPVSHMDEVISLTIERLPENKNIKMDKRNGENGI
SIO_010081: H0I88_RS01750
subclass of: SO_0000673
so part of: H0I88_RS01750
location: 381389..383797
location: region:381389-383797:1
so has part: feature:381389-383797:1:exon

WP_015423265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381389-383797:1:exon

H0I88_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01755
old locus tag: TGRD_255
old locus tag: TGRD_256
old locus tag: TGRD_RS01735
so part of: sequence
location: 383794..384927
location: region:383794-384927:1
so has part: feature:383794-384927:1:exon
subclass of: SO_0000010

position:383794:1
position: 383794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384927:1
position: 384927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383794-384927:1:exon

H0I88_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01755
old locus tag: TGRD_255
old locus tag: TGRD_256
old locus tag: TGRD_RS01735
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--glyoxylate aminotransferase family protein
translation: MMNRYLLTPGPVPIPPEIALKEALPIFHHRTDEFAAVYKNIAEGLKYIFQTENEVYVLAASGTGAMEMAVANLLSPGDKIIVASCGDFGDRWAEIAQGYGIRVIAASVRWGKTVKPAEIERVLKENSDAKAVYTTFTETSTGVANDIKSVGGIVSKTDAVLVVDAISGLAGQEFRTDEWKVDVAISASQKGFMLAPGLAFITLSGKAWKLVETSKIPKFYFDIKKYKKFYSAGETPFTPPLTLIAALQESVRLIKERGLENIWNDCKLLARAARAAMKALGLELFGEVPCEIVTSASVPVDIGIKIVKTLREKYGVSIASGQGDLKGRIIRFAHLGCIGKADLLAGFTCLEMVLIELGVKIEKGKAAAAVEEILLKT
SIO_010081: H0I88_RS01755
subclass of: SO_0000673
so part of: H0I88_RS01755
location: 383794..384927
location: region:383794-384927:1
so has part: feature:383794-384927:1:exon

WP_095558707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383794-384927:1:exon

H0I88_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: purF
locus tag: H0I88_RS01760
old locus tag: TGRD_256
old locus tag: TGRD_257
old locus tag: TGRD_RS01740
so part of: sequence
location: 385590..386954
location: region:385590-386954:1
so has part: feature:385590-386954:1:exon
subclass of: SO_0000010

position:385590:1
position: 385590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386954:1
position: 386954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385590-386954:1:exon

H0I88_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: purF
locus tag: H0I88_RS01760
old locus tag: TGRD_256
old locus tag: TGRD_257
old locus tag: TGRD_RS01740
EC number: 2.4.2.14
inference: COORDINATES: protein motif:HMM:TIGR01134.1
GO function: GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidophosphoribosyltransferase
translation: MCGIIGVENNENAAVLASAGLLTLQHRGEESAGITISGSEKMRTFKAMGLVSRIFNEEILLNKLPGTVAIGHVRYTTSSKSSLINAQPFQISCIHGNISVAHNGNITNFSKIKELLLKKGAIFNHTSDTEILLHLIAMSKGSFADIIANSLRKLEGAFSLVILKDRTLIGARDSNGFRPLVLGKIDNSYIISSESAAVEVIGGKYIRDIKPGEIIVIEDGQIKKSLIYKKGRRQTSCIFEQVYFSRPDSVMFEQTIKEARVKMGEYLAQQMKNIKADIVMPVPDTGYFAALGFSRTSGILFENGFIRNHYVGRSFIKPSQNLRNLTSTLKLRPIGEVVNGKEIILIDDSIVRGTTSKRLMNILKKTGAKKIHFALSCPPIIDSCYYGIDTPSREYLIAANNSVEEIKEYLNVDSLNFLSLDNLIKACSADNKKSDVFCAACFTGKYPTKISKST
SIO_010081: H0I88_RS01760
subclass of: SO_0000673
so part of: H0I88_RS01760
location: 385590..386954
location: region:385590-386954:1
so has part: feature:385590-386954:1:exon

WP_015423267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385590-386954:1:exon

H0I88_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01765
old locus tag: TGRD_257
old locus tag: TGRD_258
old locus tag: TGRD_RS01745
so part of: sequence
location: 386969..388549
location: region:386969-388549:1
so has part: feature:386969-388549:1:exon
subclass of: SO_0000010

position:386969:1
position: 386969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388549:1
position: 388549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386969-388549:1:exon

H0I88_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01765
old locus tag: TGRD_257
old locus tag: TGRD_258
old locus tag: TGRD_RS01745
EC number: 6.3.4.2
inference: COORDINATES: protein motif:HMM:NF003792.0
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MAKYIFITGGVVSSLGKGISGASIGRLLQLHGFKVNMIKFDPYINVDPGTMNPYQHGEVFVTIDGTESDLDLGTYERFLDVYTSKANTNTAGDIYQTVINRERRGDYDGATVQVIPHVTDEIKKRFAALKDSCDISIIEIGGTVGDIEGLPFMEAARQFQLENKKEDVFSIHVTLVPYIAGAHELKTKPTQHSVNKLREIGISPDMIICRTEHSLDEPLKKKISLFCNVREDCVIEALDSPSIYYIPEAFYKQNTDSLIVGKLNIISKKKFDKTWFTKIKSTGEFNERVKIAVVGKYADLKDAYKSIDESLNIASSELNTKAEVCYLGAEDKNLVRKLENYGAVLVPGGFGSRGIDGKIRAITYARENKTPFLGICLGMQCSVIEISRNLAKLENANSTEFDENTKYPVIKILDEQRNIKYRGNTMRLGNYKSEIKKSTLAYNLYKTTKIEERHRHRYEMNPEFIETLEKVGLLVSAYHKKKLPEIVEMKNHPFFIGVQFHPEFGSRPMKAHPLFKGLISAALKNK
SIO_010081: H0I88_RS01765
subclass of: SO_0000673
so part of: H0I88_RS01765
location: 386969..388549
location: region:386969-388549:1
so has part: feature:386969-388549:1:exon

WP_015423268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386969-388549:1:exon

H0I88_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01770
old locus tag: TGRD_RS01750
so part of: sequence
location: complement(389304..389537)
location: region:389304-389537:-1
so has part: feature:389304-389537:-1:exon
subclass of: SO_0000010

position:389304:-1
position: 389304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389537:-1
position: 389537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389304-389537:-1:exon

H0I88_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01770
old locus tag: TGRD_RS01750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFGFWVAKTINKAIKTRNITGKVKAILAETTMFMAIINIVAFAANSSATKQPGIQKTICDEQCPKYTNHRYPTHPM
SIO_010081: H0I88_RS01770
subclass of: SO_0000673
so part of: H0I88_RS01770
location: complement(389304..389537)
location: region:389304-389537:-1
so has part: feature:389304-389537:-1:exon

WP_095558708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389304-389537:-1:exon

H0I88_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01775
old locus tag: TGRD_258
old locus tag: TGRD_259
old locus tag: TGRD_RS01755
so part of: sequence
location: complement(389596..391002)
location: region:389596-391002:-1
so has part: feature:389596-391002:-1:exon
subclass of: SO_0000010

position:389596:-1
position: 389596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391002:-1
position: 391002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389596-391002:-1:exon

H0I88_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01775
old locus tag: TGRD_258
old locus tag: TGRD_259
old locus tag: TGRD_RS01755
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MGDANMLSKFINWMKWMKLALSTLAVALAGMKPLPDAKNPLTDEKQIAKQYKRWRIRMFSGMYVGYVMYYFTRKNLTYAAPSVMKKFDITMGELGTISSVSYITYAIGKFLSGIVADKCNIRTFMALGLIGSSLVNLFFGFLPSLPLLTLFWGINGGLQSMGFPPVAKGLVYWFSPKERATKWTLWSSSHTVGTAIGGIVTGLCIAIGDWHAVFYIPGIIGIITGIGLLFTLTDKPACIGLPPIEVYKKDIIPIKKQNNLFHWQILTKYVFGNPFLWSLAMSYIFIYYIRFATLDWTTKFMADRGIGNARAAFLLSSMPLVGTLGGISSGWIADRFFKGRCTPVNLIYLFCLIFSLVGMYYFINATTPIWIMITFLSLVGFFIDGPQNLVGGVQTSRLTVQESVSAACGFTGMFGYVGAALSGFGVALLVGKYGWHGFFVSCIISCIIAMFFIALTWKKEATDIKLSQ
SIO_010081: H0I88_RS01775
subclass of: SO_0000673
so part of: H0I88_RS01775
location: complement(389596..391002)
location: region:389596-391002:-1
so has part: feature:389596-391002:-1:exon

WP_232501234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389596-391002:-1:exon

H0I88_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01780
old locus tag: TGRD_259
old locus tag: TGRD_260
old locus tag: TGRD_RS01760
so part of: sequence
location: 391772..392758
location: region:391772-392758:1
so has part: feature:391772-392758:1:exon
subclass of: SO_0000010

position:391772:1
position: 391772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392758:1
position: 392758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391772-392758:1:exon

H0I88_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01780
old locus tag: TGRD_259
old locus tag: TGRD_260
old locus tag: TGRD_RS01760
inference: COORDINATES: protein motif:HMM:NF040105.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MoxR family ATPase
translation: MAVYIDELNKKIMQDSIFVSKLLNEVSKVLVGQKYVLERMLIGLLSDGHILLEGFPGLAKTLAVKSLAAVIQAAYKRIQFTPDLLPADVVGTLIYNPQSSDFVVKKGPVFANIVLADEINRAPAKVQSALLEAMQERHVTIGDTTYGLPDPFLVMATQNPIEQEGTYPLPEAQVDRFMLKLKVSYPNKSDEKIILERMTRFLPKINPIISLKDVQKAKDSIEQIYVDDKVKNYIVDIVFASRNPGEYGLKDLRSLIAYGASPRATISLTLASKAYAFLQGRGYVIPEDIKIIGHDVLRHRILITYEAEVDSIDSDDIIEKIFGGVDVP
SIO_010081: H0I88_RS01780
subclass of: SO_0000673
so part of: H0I88_RS01780
location: 391772..392758
location: region:391772-392758:1
so has part: feature:391772-392758:1:exon

WP_015423270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391772-392758:1:exon

H0I88_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01785
old locus tag: TGRD_260
old locus tag: TGRD_261
old locus tag: TGRD_RS01765
so part of: sequence
location: 393055..394080
location: region:393055-394080:1
so has part: feature:393055-394080:1:exon
subclass of: SO_0000010

position:393055:1
position: 393055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394080:1
position: 394080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393055-394080:1:exon

H0I88_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01785
old locus tag: TGRD_260
old locus tag: TGRD_261
old locus tag: TGRD_RS01765
inference: COORDINATES: protein motif:HMM:NF024909.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF58 domain-containing protein
translation: MLFLIALSTLFSCELLRADTLDYYMMDKDILKKQIRQLAIRSHKLVNEIFAGQYQSVFKGQGIEFAEVREYQIGDDFRSIDHNVTARFGKPYIKLFSEERELTVIFLIDVSSSQRFGSTDRLKSEITAEVAAILAFASLKNNDSVGMLSFTDKVEKVIAPRKGRNNILKMIYEILDSNFSGTETSISVALKAINGIWRRKAIVFLISDFQDENYEKDLAMVAKRHDLICIKIEDNRESDLPAVGLVEMEDLETKETMTIDTSAVYESFKQKNEDFKKETVRIFKKAAVSVINLNTGGSYINPLIRFFKERERRIRRECSHFRIPLIFMAIFSFFDMVSKNA
SIO_010081: H0I88_RS01785
subclass of: SO_0000673
so part of: H0I88_RS01785
location: 393055..394080
location: region:393055-394080:1
so has part: feature:393055-394080:1:exon

WP_198407713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393055-394080:1:exon

H0I88_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01790
old locus tag: TGRD_261
old locus tag: TGRD_262
old locus tag: TGRD_RS01770
so part of: sequence
location: 394073..394957
location: region:394073-394957:1
so has part: feature:394073-394957:1:exon
subclass of: SO_0000010

position:394073:1
position: 394073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394957:1
position: 394957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394073-394957:1:exon

H0I88_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01790
old locus tag: TGRD_261
old locus tag: TGRD_262
old locus tag: TGRD_RS01770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKHFKYIIIAILFVFCICASLYSREKVSASLNKNRVFVGDIIKFIVKVRLPHGAQISADQDFSFDDFDIISSDIRRISDAENIYELNFNIAAYKTGIFTVNQLTVFYISSDGTNNLFFTPEVRVEVLSIIGSGTAEDIKDIKALKKLRVGPVYVLLIVIMSFLFIVCVVSVVKAVAERIKKSKQFEADPKIKALNALNDLYKGIDGVSVRIFYYKMSEILRTYASKQYNFNAMEMTTSEFFDKIKPFIPREININEFKNYLKIFNLARYADFTPDKIETEDNYIFTKKLLELL
SIO_010081: H0I88_RS01790
subclass of: SO_0000673
so part of: H0I88_RS01790
location: 394073..394957
location: region:394073-394957:1
so has part: feature:394073-394957:1:exon

WP_015423272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394073-394957:1:exon

H0I88_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01795
old locus tag: TGRD_262
old locus tag: TGRD_263
old locus tag: TGRD_RS01775
so part of: sequence
location: 395014..395955
location: region:395014-395955:1
so has part: feature:395014-395955:1:exon
subclass of: SO_0000010

position:395014:1
position: 395014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395955:1
position: 395955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395014-395955:1:exon

H0I88_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01795
old locus tag: TGRD_262
old locus tag: TGRD_263
old locus tag: TGRD_RS01775
inference: COORDINATES: protein motif:HMM:NF012321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MYISIIKKNSFKPCISFSRVNLLKSNNPEFKKILLNILKVLKCVSLILIIIALAKPQKGKTFEHLSDQGIDIIVALDTSTSMRSLDFRSLNRMEAAKKVIRDFMKERKYDRIGLVIFSGLAFTQCPLTTDKDSLAEFINNINIGDTGLDGTAIGSAIMTSVNRLKDSRAKSRIIILVTDGNNNMGEIDPLTASKIARSYDIKIYAVGVGSLDGAIYEVDDPFLGKREIKYRKDAINESVLKEVAYNTSGGYFRAQDVKSFENIMKQIDKLEKDDIEVMRFTNYRELYKYFLIPSFILLLLIIVLENTYLRKLP
SIO_010081: H0I88_RS01795
subclass of: SO_0000673
so part of: H0I88_RS01795
location: 395014..395955
location: region:395014-395955:1
so has part: feature:395014-395955:1:exon

WP_232501235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395014-395955:1:exon

H0I88_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01800
old locus tag: TGRD_263
old locus tag: TGRD_264
old locus tag: TGRD_RS01780
so part of: sequence
location: 396199..397098
location: region:396199-397098:1
so has part: feature:396199-397098:1:exon
subclass of: SO_0000010

position:396199:1
position: 396199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397098:1
position: 397098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396199-397098:1:exon

H0I88_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01800
old locus tag: TGRD_263
old locus tag: TGRD_264
old locus tag: TGRD_RS01780
inference: COORDINATES: protein motif:HMM:NF025141.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MDRLISRVNISTLVSVNLRAYKIKYILLLAGLFFVIIAMACPQYGDGMRTVIKESSEIIIALDISKSMLAEDSKPSRLEKAKMIVSKIVEENPGEKMGIVVFSGTAMWQCPLTFDLHALKMFLQSVETTNLPLGGTRISSAIMLASKAASCESAGSRVMILISDGENHDSKIKEAVNAAKKAGLRIISIGIGKKEGAPIPVKDETGTVIDYVKDVNGKVVISRANPVLLKNVAEEMGGKYFDALDDDVYPSLVKAVRNLDKNNSEVGMKSSKTDRFQIFLLLGLIALFAELLFPLRRKR
SIO_010081: H0I88_RS01800
subclass of: SO_0000673
so part of: H0I88_RS01800
location: 396199..397098
location: region:396199-397098:1
so has part: feature:396199-397098:1:exon

WP_158302776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396199-397098:1:exon

H0I88_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01805
old locus tag: TGRD_264
old locus tag: TGRD_265
old locus tag: TGRD_RS01785
so part of: sequence
location: 397095..398093
location: region:397095-398093:1
so has part: feature:397095-398093:1:exon
subclass of: SO_0000010

position:397095:1
position: 397095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398093:1
position: 398093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397095-398093:1:exon

H0I88_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01805
old locus tag: TGRD_264
old locus tag: TGRD_265
old locus tag: TGRD_RS01785
inference: COORDINATES: protein motif:HMM:NF024816.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKLKMFMLALSASLLIFLLIFSYKDIRGNNRAVRYFNDGNFEAASESFNKELEKLPGSYSIFNNAAGAEYKLNKFDEAQTKYNAVLDFSDADQEEKFIALYGLGNTEYGKNDFRKAASLYKKALRLKPGDKDAKYNLEVALLKLNEKDSCQNNNDNSSKQNSRQKGRNNKQNEQNIGNRQQSKEERDLKRHMEQNDKAQKENEKKRQSLGRQVSVVRDEIQKRQNVQKGLEEEKLRLDKQKLGISNKIEALKKTGVTKNKFSKRKNESQGDNPLGDKSEKEKLEMQPVGEKEDKKDMPAAIFLNYYDEAERKAYKLRNKNKKSALNQPQEDW
SIO_010081: H0I88_RS01805
subclass of: SO_0000673
so part of: H0I88_RS01805
location: 397095..398093
location: region:397095-398093:1
so has part: feature:397095-398093:1:exon

WP_015423275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397095-398093:1:exon

H0I88_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01810
old locus tag: TGRD_265
old locus tag: TGRD_266
old locus tag: TGRD_RS01790
so part of: sequence
location: 398095..399870
location: region:398095-399870:1
so has part: feature:398095-399870:1:exon
subclass of: SO_0000010

position:398095:1
position: 398095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399870:1
position: 399870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398095-399870:1:exon

H0I88_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01810
old locus tag: TGRD_265
old locus tag: TGRD_266
old locus tag: TGRD_RS01790
inference: COORDINATES: protein motif:HMM:NF024973.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BatD family protein
translation: MLKKILLPVILLLLLFTSVLASAETIYFKASANKKTVTLSESFIYSVTVSGDSTNLPEYKMDAMPEFNRFGTTVSRSISVVTGKTSMSVTRDYTLGPKKIGKFTIPPAKITFKGKTYLTESVEIEVTPAQSVKSIPVVANRRQLSSQNAAAGKAFVKASINKKTAYENEKLVYKFSFYTNVDLVSNPEYYPPDFSGFWNDGSKPKNHFEVIDGSNYRVDEIETTLYPVGTGLKRILPAKLKIDLMNFSLPSGMNDFFSFFADNGCAGDGETKILETESLEIKIIPLPKDGKPADFYGATGDFEIKAVVDKKDVRINEPVTLTVTVSGSGNMKSISDINFGVYNDFKKYDTIVESTSGNSKKFKTIFIPLVSGEKEIPAASLSFFSPLKKQYETIKTSSQKIIVSGMSLHTEENVEDKLKIDIMHKDINYNKRIKTLKLYRGYLIEKPVFYLIFVPFIMLFILSVCYAVYMRRVSRNPFKKLKTLSFAEVQKLVKEAENRISENNFEASLDLLYQALIEIINIETGTKSDNLQKNQIIGNLRKKNADDEKIIEIIKMLERFDFYKFASVNLDKDSINALLINVETLILSFKK
SIO_010081: H0I88_RS01810
subclass of: SO_0000673
so part of: H0I88_RS01810
location: 398095..399870
location: region:398095-399870:1
so has part: feature:398095-399870:1:exon

WP_015423276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398095-399870:1:exon

H0I88_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01815
old locus tag: TGRD_266
old locus tag: TGRD_267
old locus tag: TGRD_RS01795
so part of: sequence
location: 399952..400104
location: region:399952-400104:1
so has part: feature:399952-400104:1:exon
subclass of: SO_0000010

position:399952:1
position: 399952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400104:1
position: 400104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399952-400104:1:exon

H0I88_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01815
old locus tag: TGRD_266
old locus tag: TGRD_267
old locus tag: TGRD_RS01795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubredoxin
translation: MKKWKCSACGYVYDPAVGLPEAGIALGTLFEQLPEDWVCPLCGAPKSTFE
SIO_010081: H0I88_RS01815
subclass of: SO_0000673
so part of: H0I88_RS01815
location: 399952..400104
location: region:399952-400104:1
so has part: feature:399952-400104:1:exon

WP_015423277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399952-400104:1:exon

H0I88_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01820
old locus tag: TGRD_267
old locus tag: TGRD_268
old locus tag: TGRD_RS01800
so part of: sequence
location: 400117..401376
location: region:400117-401376:1
so has part: feature:400117-401376:1:exon
subclass of: SO_0000010

position:400117:1
position: 400117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401376:1
position: 401376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400117-401376:1:exon

H0I88_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01820
old locus tag: TGRD_267
old locus tag: TGRD_268
old locus tag: TGRD_RS01800
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase family protein
translation: MKRIYMDNQSNTKADERVFESMKPFFIEYYGNPQSIYSFGSFSKNALETARRQVADLINADAEEIIFTSCGTESNNLAVKGIAGALKAGGRHIIISSIEHFSVLNSVKRLEKEGFEVSFIPVDGNGNVDGSELKKALRKDTILVSVQYANPEIGTIQDIKKLVSVVKENSNAGKFVAFHTDAVSACGTIPVDVKDLGVDALTFSASVMYGPKGAAALYLKKGVRISPQMDGGIQENYIRSGTENIPTIVGFGKACEIAKDEIVKNGKAVQKLRDRLIAELPRRIEHIYLNGVRENRLPGNVNFSIEFVEGEALFLLLDAKGIMASSGSACASKNLKLSHILDAIGIDVAVGQGSILFTLSKFNTEEEINYVLEEFPNIVKRLRDISPLYSYFLKTGSRKAAGPGTDFDDHCTTTIRRID
SIO_010081: H0I88_RS01820
subclass of: SO_0000673
so part of: H0I88_RS01820
location: 400117..401376
location: region:400117-401376:1
so has part: feature:400117-401376:1:exon

WP_015423278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400117-401376:1:exon

H0I88_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: nifU
locus tag: H0I88_RS01825
old locus tag: TGRD_268
old locus tag: TGRD_269
old locus tag: TGRD_RS01805
so part of: sequence
location: 401421..401798
location: region:401421-401798:1
so has part: feature:401421-401798:1:exon
subclass of: SO_0000010

position:401421:1
position: 401421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401798:1
position: 401798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401421-401798:1:exon

H0I88_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: nifU
locus tag: H0I88_RS01825
old locus tag: TGRD_268
old locus tag: TGRD_269
old locus tag: TGRD_RS01805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold protein NifU
translation: MAFYSERVMDHFANPRNVGEIKDADGIGEVGNPVCGDMMTFYIKVKDNKIEDVKFKTFGCGAAIAVSSMVSEMVLGKTLEEVMNLTNADVAKALGGLPSNKMHCSNLGADALHKAVENYNSKQVK
SIO_010081: H0I88_RS01825
subclass of: SO_0000673
so part of: H0I88_RS01825
location: 401421..401798
location: region:401421-401798:1
so has part: feature:401421-401798:1:exon

WP_015423279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401421-401798:1:exon

H0I88_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01830
old locus tag: TGRD_269
old locus tag: TGRD_270
old locus tag: TGRD_RS01810
so part of: sequence
location: 401976..403172
location: region:401976-403172:1
so has part: feature:401976-403172:1:exon
subclass of: SO_0000010

position:401976:1
position: 401976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403172:1
position: 403172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401976-403172:1:exon

H0I88_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01830
old locus tag: TGRD_269
old locus tag: TGRD_270
old locus tag: TGRD_RS01810
inference: COORDINATES: protein motif:HMM:NF012955.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FprA family A-type flavoprotein
translation: MTVRLIKDGVYAVGAIDWNERHFHGHTYVTRRGVTYNSYLIVDEKITLIDTVRRGYEKELMENIRTLVDLSKIKIDIIIINHIEPDHSGAFPEILKLCPGAKVYGTEKARQGLLKYYGVSGDWTVVKSGQSLSIGKRTLNFIDVPMIHWPDSMFTYSAYDKILFSNDGFGQHYATNKVFDDEVDFAALMDEAQKYYANILWPFNALVAAKLSTIDKLNLNIELIAPSHGLVWRRYVPEIMQKYLYWSSHSCQNRIAVVYETMWNSTEKMAGKIIEGITSEGVEAVLFDITKNDRTDIASYMLDAKGWVFGSSTHDGEMLPVITGFLHFLKGSKAKGRRSFAFGSYGWSGEAVKDIEDTGSCVSTFESSLMVVFNPTDEELNKCFEAGKTFALKIKTEK
SIO_010081: H0I88_RS01830
subclass of: SO_0000673
so part of: H0I88_RS01830
location: 401976..403172
location: region:401976-403172:1
so has part: feature:401976-403172:1:exon

WP_015423280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401976-403172:1:exon

H0I88_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01835
old locus tag: TGRD_270
old locus tag: TGRD_271
old locus tag: TGRD_RS01815
so part of: sequence
location: 403309..403752
location: region:403309-403752:1
so has part: feature:403309-403752:1:exon
subclass of: SO_0000010

position:403309:1
position: 403309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403752:1
position: 403752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403309-403752:1:exon

H0I88_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01835
old locus tag: TGRD_270
old locus tag: TGRD_271
old locus tag: TGRD_RS01815
inference: COORDINATES: protein motif:HMM:NF013996.2
GO function: GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: desulfoferrodoxin family protein
translation: MKGLVCKVCGYVALDGNKERCPVCRSKNVFEEKEDAYKMPDFKAASDETEKKHIPSFMLMSECSLIPDTGCVDVHVKIGEILHPTLPEHHITGIAFYIDNKFVENIMLESDINPAAVIHLNGSTKGRVQVIENCNIHGKWFNEVEVK
SIO_010081: H0I88_RS01835
subclass of: SO_0000673
so part of: H0I88_RS01835
location: 403309..403752
location: region:403309-403752:1
so has part: feature:403309-403752:1:exon

WP_015423281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403309-403752:1:exon

H0I88_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01840
old locus tag: TGRD_271
old locus tag: TGRD_272
old locus tag: TGRD_RS01820
so part of: sequence
location: 403953..404531
location: region:403953-404531:1
so has part: feature:403953-404531:1:exon
subclass of: SO_0000010

position:403953:1
position: 403953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404531:1
position: 404531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403953-404531:1:exon

H0I88_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01840
old locus tag: TGRD_271
old locus tag: TGRD_272
old locus tag: TGRD_RS01820
inference: COORDINATES: protein motif:HMM:NF012436.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubrerythrin family protein
translation: MVKSIKGTKTEKHLLESFAGESQARMRYTYFASKAKKEGFEQIFAVFMEIADNEKEHAKRFFKFLEGGFVEITGTFPAGIISSTIENLRFSATGENEEHSKIYPEAARIADEEGFPEVAECFRRVAIAEKHHEARYLTLLNNLENDRVFKKGIVVRWRCRNCGYVYESKEAFEKCPACLHSKAYMEELSGSF
SIO_010081: H0I88_RS01840
subclass of: SO_0000673
so part of: H0I88_RS01840
location: 403953..404531
location: region:403953-404531:1
so has part: feature:403953-404531:1:exon

WP_015423282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403953-404531:1:exon

H0I88_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01845
old locus tag: TGRD_272
old locus tag: TGRD_273
old locus tag: TGRD_RS01825
so part of: sequence
location: complement(404827..405594)
location: region:404827-405594:-1
so has part: feature:404827-405594:-1:exon
subclass of: SO_0000010

position:404827:-1
position: 404827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405594:-1
position: 405594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404827-405594:-1:exon

H0I88_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01845
old locus tag: TGRD_272
old locus tag: TGRD_273
old locus tag: TGRD_RS01825
inference: COORDINATES: protein motif:HMM:NF012797.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA methyltransferase
translation: MIIKSVQNQIFKDALSLQNKKLRDKNGLFFVEGKKQIYEIPKNRTIKQIFISEKYKNDVTNLKNVIMLSNHLFSKLSATKSPQGIMAIVEKKYYAVEDIIKNSGLFILLENIQDPGNLGTIIRSADAFGAKAVFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGEKYLNDIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNRTFIF
SIO_010081: H0I88_RS01845
subclass of: SO_0000673
so part of: H0I88_RS01845
location: complement(404827..405594)
location: region:404827-405594:-1
so has part: feature:404827-405594:-1:exon

WP_015423283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404827-405594:-1:exon

H0I88_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01850
old locus tag: TGRD_RS01830
so part of: sequence
location: 405764..406042
location: region:405764-406042:1
so has part: feature:405764-406042:1:exon
subclass of: SO_0000010

position:405764:1
position: 405764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406042:1
position: 406042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405764-406042:1:exon

H0I88_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01850
old locus tag: TGRD_RS01830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIFLKIKKRIADNISIDSFMKMKRLWINYVLPQRKLLAVSVLFMVIFGVLEAVSVKLFEPVFDKVFIDKNKEVLTWVAIQIVILFAAKDVA
SIO_010081: H0I88_RS01850
subclass of: SO_0000673
so part of: H0I88_RS01850
location: 405764..406042
location: region:405764-406042:1
so has part: feature:405764-406042:1:exon

WP_095558711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405764-406042:1:exon

H0I88_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01855
old locus tag: TGRD_RS05870
so part of: sequence
location: 406511..406675
location: region:406511-406675:1
so has part: feature:406511-406675:1:exon
subclass of: SO_0000010

position:406511:1
position: 406511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406675:1
position: 406675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406511-406675:1:exon

H0I88_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01855
old locus tag: TGRD_RS05870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFFGGVAAAGTLVYGGHRIMRGSLTTGSFMVFLFAIVAAYKPMKSLANLNMCL
SIO_010081: H0I88_RS01855
subclass of: SO_0000673
so part of: H0I88_RS01855
location: 406511..406675
location: region:406511-406675:1
so has part: feature:406511-406675:1:exon

WP_158302777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406511-406675:1:exon

H0I88_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01860
old locus tag: TGRD_RS05670
so part of: sequence
location: 406712..406849
location: region:406712-406849:1
so has part: feature:406712-406849:1:exon
subclass of: SO_0000010

position:406712:1
position: 406712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406849:1
position: 406849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406712-406849:1:exon

H0I88_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01860
old locus tag: TGRD_RS05670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein/permease
translation: MDQNPAIVDKPGAKVFRATEGIIKVNNVRFDYVPGFEILHGVILK
SIO_010081: H0I88_RS01860
subclass of: SO_0000673
so part of: H0I88_RS01860
location: 406712..406849
location: region:406712-406849:1
so has part: feature:406712-406849:1:exon

WP_125266978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406712-406849:1:exon

H0I88_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01870
old locus tag: TGRD_RS01840
so part of: sequence
location: 407057..407491
location: region:407057-407491:1
so has part: feature:407057-407491:1:exon
subclass of: SO_0000010

position:407057:1
position: 407057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407491:1
position: 407491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407057-407491:1:exon

H0I88_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01870
old locus tag: TGRD_RS01840
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MGRPAATDEEVIEASKNAAAHNFIVNQERKYDTIVGERGGNLSSGQKQMISIARAMLKNAPILLLDEATSSLDSQSEKIVQEGLDKLIKGRTSIVIAHRLSTIINSDRIYVFESGNIVESGTHKELLKLKCYYTNLYKLQFVHV
SIO_010081: H0I88_RS01870
subclass of: SO_0000673
so part of: H0I88_RS01870
location: 407057..407491
location: region:407057-407491:1
so has part: feature:407057-407491:1:exon

WP_095558712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407057-407491:1:exon

H0I88_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01875
old locus tag: TGRD_RS01850
old locus tag: TGRD_tRNA22
so part of: sequence
location: 408175..408248
location: region:408175-408248:1
so has part: feature:408175-408248:1:exon
subclass of: SO_0000663

position:408175:1
position: 408175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408248:1
position: 408248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408175-408248:1:exon

H0I88_RS01875
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01875
old locus tag: TGRD_RS01850
old locus tag: TGRD_tRNA22
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:408209..408211,aa:Arg,seq:tct)
SIO_010081: H0I88_RS01875
subclass of: SO_0000673
so part of: H0I88_RS01875
location: 408175..408248
location: region:408175-408248:1
so has part: feature:408175-408248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408175-408248:1:exon

H0I88_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01880
old locus tag: TGRD_RS01855
old locus tag: TGRD_tRNA23
so part of: sequence
location: 408261..408334
location: region:408261-408334:1
so has part: feature:408261-408334:1:exon
subclass of: SO_0000663

position:408261:1
position: 408261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408334:1
position: 408334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408261-408334:1:exon

H0I88_RS01880
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS01880
old locus tag: TGRD_RS01855
old locus tag: TGRD_tRNA23
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:408295..408297,aa:His,seq:gtg)
SIO_010081: H0I88_RS01880
subclass of: SO_0000673
so part of: H0I88_RS01880
location: 408261..408334
location: region:408261-408334:1
so has part: feature:408261-408334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408261-408334:1:exon

H0I88_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01885
old locus tag: TGRD_273
old locus tag: TGRD_274
old locus tag: TGRD_RS01860
so part of: sequence
location: 408708..409385
location: region:408708-409385:1
so has part: feature:408708-409385:1:exon
subclass of: SO_0000010

position:408708:1
position: 408708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409385:1
position: 409385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408708-409385:1:exon

H0I88_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01885
old locus tag: TGRD_273
old locus tag: TGRD_274
old locus tag: TGRD_RS01860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPEDISKEQAEELFRNLNKIESPYVKSRIADILWHIKKLDKNNIEAAKIAIESYYKSVKYFVNNCKISEFFLKFAIGQLERLAIIILFLKDIPKRDHIYNKLLEYLDNIANIEFISAAFGIFLRLKLSKEETKVVIEKLENLIKLLGDKIDGFSLRKLYSTGAEIAKKSGELDKMRSFKIIEADSFVEEADKINIRGWIIKSGFLKKAILLYQSIPSKKIELKN
SIO_010081: H0I88_RS01885
subclass of: SO_0000673
so part of: H0I88_RS01885
location: 408708..409385
location: region:408708-409385:1
so has part: feature:408708-409385:1:exon

WP_015423284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408708-409385:1:exon

H0I88_RS06370
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06370
so part of: sequence
location: 410169..410300
location: region:410169-410300:1
so has part: feature:410169-410300:1:exon
subclass of: SO_0000010

position:410169:1
position: 410169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410300:1
position: 410300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410169-410300:1:exon

H0I88_RS06370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIHKIEHYNKINPKFEKLKSVVANLNKYKEIIDIFMKENISFF
SIO_010081: H0I88_RS06370
subclass of: SO_0000673
so part of: H0I88_RS06370
location: 410169..410300
location: region:410169-410300:1
so has part: feature:410169-410300:1:exon

WP_269763548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410169-410300:1:exon

H0I88_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01890
old locus tag: TGRD_RS01865
so part of: sequence
location: 410468..410671
location: region:410468-410671:1
so has part: feature:410468-410671:1:exon
subclass of: SO_0000010

position:410468:1
position: 410468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410671:1
position: 410671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410468-410671:1:exon

H0I88_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01890
old locus tag: TGRD_RS01865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVCKAKKSNNNENDISIDKNRIKQMTLKEGKCHYKMGCFIHIENETLTSFWYESGQEVSILEHKNI
SIO_010081: H0I88_RS01890
subclass of: SO_0000673
so part of: H0I88_RS01890
location: 410468..410671
location: region:410468-410671:1
so has part: feature:410468-410671:1:exon

WP_095558714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410468-410671:1:exon

H0I88_RS05915
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05915
so part of: sequence
location: 411110..411418
location: region:411110-411418:1
so has part: feature:411110-411418:1:exon
subclass of: SO_0000010

position:411110:1
position: 411110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411418:1
position: 411418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411110-411418:1:exon

H0I88_RS05915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05915
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MSYKTTGINNRRYLGNKYKLLPFIKKIVNNNCSNINTVADIFAGTGAVTYLFKDKKIIMYSNYICNLAWFGSENISLKKIIEIIVRYNNDKINADNYVSKNF
SIO_010081: H0I88_RS05915
subclass of: SO_0000673
so part of: H0I88_RS05915
location: 411110..411418
location: region:411110-411418:1
so has part: feature:411110-411418:1:exon

WP_198407714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411110-411418:1:exon

H0I88_RS05920
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05920
so part of: sequence
location: 411548..412129
location: region:411548-412129:1
so has part: feature:411548-412129:1:exon
subclass of: SO_0000010

position:411548:1
position: 411548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412129:1
position: 412129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411548-412129:1:exon

H0I88_RS05920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05920
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MDKIANTCGHYDAYRGNGDLNKGLELSVPEVLNNLCDNNKCFNKDANILVKDIKADLVYIDSPYNSRQYCDLYHFIENIARWGKPKVEGVAKKMERSDLKSDYCTQKAGDLISNINAKYILLSYNNMSYKGNARSNAKISDADIMRILSKRGKIKIFSQKYKSFSAGKSYITGNKERLFLCVCKTFKYVKPNN
SIO_010081: H0I88_RS05920
subclass of: SO_0000673
so part of: H0I88_RS05920
location: 411548..412129
location: region:411548-412129:1
so has part: feature:411548-412129:1:exon

WP_198407715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411548-412129:1:exon

H0I88_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01900
old locus tag: TGRD_RS01875
so part of: sequence
location: 412153..412599
location: region:412153-412599:1
so has part: feature:412153-412599:1:exon
subclass of: SO_0000010

position:412153:1
position: 412153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412599:1
position: 412599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412153-412599:1:exon

H0I88_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01900
old locus tag: TGRD_RS01875
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MIVYSFNNQVRFNSRGEFNLPVGKRDFNTQLIKKLIFFIDRLKSNNFIFTNTDFRKFDTTALTKNDFVYCDPSYLITRASYNEQNGWTDKDEKDLLEFLSFLNAKEIKFALSNVFRNKGKENSILLDWLKDKSYKVIILCKLKLSYKR
SIO_010081: H0I88_RS01900
subclass of: SO_0000673
so part of: H0I88_RS01900
location: 412153..412599
location: region:412153-412599:1
so has part: feature:412153-412599:1:exon

WP_158302778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412153-412599:1:exon

H0I88_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01905
old locus tag: TGRD_RS01880
so part of: sequence
location: 412651..413127
location: region:412651-413127:1
so has part: feature:412651-413127:1:exon
subclass of: SO_0000010

position:412651:1
position: 412651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413127:1
position: 413127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412651-413127:1:exon

H0I88_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01905
old locus tag: TGRD_RS01880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVKNISFKSYCWNIGTTSYRTKEFNTNIEKQLDIVEKFWNLQKNKNELWNEKIQTAYYKYMQNNKFVRGSANRPAKDAREKTSGLVDIGLLTSDRRLTPAGLKLLQISRDKNFAKDNELKIANDSYIYLKQLLKMSVKTDIYIVRPFVLQIRLSFKK
SIO_010081: H0I88_RS01905
subclass of: SO_0000673
so part of: H0I88_RS01905
location: 412651..413127
location: region:412651-413127:1
so has part: feature:412651-413127:1:exon

WP_095558716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412651-413127:1:exon

H0I88_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01910
old locus tag: TGRD_RS01885
so part of: sequence
location: 413141..414022
location: region:413141-414022:1
so has part: feature:413141-414022:1:exon
subclass of: SO_0000010

position:413141:1
position: 413141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414022:1
position: 414022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413141-414022:1:exon

H0I88_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01910
old locus tag: TGRD_RS01885
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF021040.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AlwI family type II restriction endonuclease
translation: MPLCINKEITDRALVKIKDIRDNKCSVDDFILDTLLSMDNYKEALKLLISNRVIEKLVKVIGMNRKSHNYDKPYYMLYKSLFTLCFDNGKNQLLNVYKSIDGLRGKTKSFWNDYMFYSNSIKTLKNNPEKALKRTRLLTLKTEKDFKKEFFNLLHLFKAKATLSDYLDLNRRYFRLTDTMLFQDNTLRMDIIPEYFFKENIDNIYKLAFTKDKNIQEDCSLSEISPYLIFDDKKILRNINKSLKTRYSNINDFMERVDDERLNRFKSLIEKKFTNDMLIKLLEMFESRKQDVE
SIO_010081: H0I88_RS01910
subclass of: SO_0000673
so part of: H0I88_RS01910
location: 413141..414022
location: region:413141-414022:1
so has part: feature:413141-414022:1:exon

WP_158302779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413141-414022:1:exon

H0I88_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01925
old locus tag: TGRD_RS05875
so part of: sequence
location: 414813..414977
location: region:414813-414977:1
so has part: feature:414813-414977:1:exon
subclass of: SO_0000010

position:414813:1
position: 414813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414977:1
position: 414977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414813-414977:1:exon

H0I88_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01925
old locus tag: TGRD_RS05875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIVRGTNINEMLSKELIDALTRMLLEGILYLGYPIISIDDEPNSCDVMLLSER
SIO_010081: H0I88_RS01925
subclass of: SO_0000673
so part of: H0I88_RS01925
location: 414813..414977
location: region:414813-414977:1
so has part: feature:414813-414977:1:exon

WP_158302780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414813-414977:1:exon

H0I88_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaX
locus tag: H0I88_RS01930
old locus tag: TGRD_274
old locus tag: TGRD_275
old locus tag: TGRD_RS01900
so part of: sequence
location: 415739..417334
location: region:415739-417334:1
so has part: feature:415739-417334:1:exon
subclass of: SO_0000010

position:415739:1
position: 415739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417334:1
position: 417334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415739-417334:1:exon

H0I88_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaX
locus tag: H0I88_RS01930
old locus tag: TGRD_274
old locus tag: TGRD_275
old locus tag: TGRD_RS01900
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004046.0
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MAYLVLARKFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAKALNCKNGPTIKPCGVCENCVEISKSSSVDVLEIDGASNNGIDDIRVLRENVKFSTASSKYKIYIIDEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISGAEMVCAIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGLLGLLPKDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINPAIAEISSEDKKIFDVQKSLFTVSRYVRMNNLLSKALEEMRWHDQPRILLEMYLLKMSEPYYDVGELINKITDLERNFRTCGNSQLPFEKQPAVRSESCAAGKVFDPADLTVVWNDIVSEIIKKHSLTGQPLKNALIKIESDSSIQLVFSKQFDYDSGLEFQEQIAKLFQRMTGLNVAIKIVIEKNISKNKAVYEDAVVKEECPHPNKENAKTTIPARIEEIAKRFGSVAKKI
SIO_010081: H0I88_RS01930
subclass of: SO_0000673
so part of: H0I88_RS01930
location: 415739..417334
location: region:415739-417334:1
so has part: feature:415739-417334:1:exon

WP_015423285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415739-417334:1:exon

H0I88_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01935
old locus tag: TGRD_276
old locus tag: TGRD_RS01905
so part of: sequence
location: 417371..417715
location: region:417371-417715:1
so has part: feature:417371-417715:1:exon
subclass of: SO_0000010

position:417371:1
position: 417371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417715:1
position: 417715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417371-417715:1:exon

H0I88_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01935
old locus tag: TGRD_276
old locus tag: TGRD_RS01905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLVLSIIFCFVASNLLAIIAKDEDIEMKKYKIELVDGTFKEVNIPDGVKPSRELFDKLIDEGKAKDFQYKDSFGGKFEKFADKYLNFQPPTGKGTGSKKLDLLMEDTAVLFL
SIO_010081: H0I88_RS01935
subclass of: SO_0000673
so part of: H0I88_RS01935
location: 417371..417715
location: region:417371-417715:1
so has part: feature:417371-417715:1:exon

WP_015423286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417371-417715:1:exon

H0I88_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: recR
locus tag: H0I88_RS01940
old locus tag: TGRD_275
old locus tag: TGRD_277
old locus tag: TGRD_RS01910
so part of: sequence
location: 418613..419209
location: region:418613-419209:1
so has part: feature:418613-419209:1:exon
subclass of: SO_0000010

position:418613:1
position: 418613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419209:1
position: 419209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418613-419209:1:exon

H0I88_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: recR
locus tag: H0I88_RS01940
old locus tag: TGRD_275
old locus tag: TGRD_277
old locus tag: TGRD_RS01910
inference: COORDINATES: protein motif:HMM:TIGR00615.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MNRPRPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSICCNLSEHDPCPICSDVTREKNIVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGPDDIRIDKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGDIEYADEITISRAIAGRKEM
SIO_010081: H0I88_RS01940
subclass of: SO_0000673
so part of: H0I88_RS01940
location: 418613..419209
location: region:418613-419209:1
so has part: feature:418613-419209:1:exon

WP_015423287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418613-419209:1:exon

H0I88_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01945
old locus tag: TGRD_276
old locus tag: TGRD_278
old locus tag: TGRD_RS01915
so part of: sequence
location: 419306..419887
location: region:419306-419887:1
so has part: feature:419306-419887:1:exon
subclass of: SO_0000010

position:419306:1
position: 419306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419887:1
position: 419887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419306-419887:1:exon

H0I88_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01945
old locus tag: TGRD_276
old locus tag: TGRD_278
old locus tag: TGRD_RS01915
inference: COORDINATES: protein motif:HMM:TIGR02175.1
GO function: GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoacid:acceptor oxidoreductase family protein
translation: MMSAKMIEVRWHGRGGQGAKTAALLFAEAVLATGKYIQAFPEYGPERMGAPVQSFNRISEAPITIHSGITNPDYAVILDPSLIESVPVTDGIGEKGKVIVNTSFSSSEIAQKLGIDASQVFVVNASRIALETIGRNIPNTPMLGALVKVIGTLDINGVLEDTKVKLTAKFRHKPEVIEGNLASIKCAFGEVKN
SIO_010081: H0I88_RS01945
subclass of: SO_0000673
so part of: H0I88_RS01945
location: 419306..419887
location: region:419306-419887:1
so has part: feature:419306-419887:1:exon

WP_232501236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419306-419887:1:exon

H0I88_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01950
old locus tag: TGRD_277
old locus tag: TGRD_279
old locus tag: TGRD_RS01920
so part of: sequence
location: 419992..420303
location: region:419992-420303:1
so has part: feature:419992-420303:1:exon
subclass of: SO_0000010

position:419992:1
position: 419992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420303:1
position: 420303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419992-420303:1:exon

H0I88_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01950
old locus tag: TGRD_277
old locus tag: TGRD_279
old locus tag: TGRD_RS01920
inference: COORDINATES: protein motif:HMM:TIGR02179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MKKEERKLTAVEIPIGDIVEAETAVEFNTGSWRSERPVWNKEKCIHCLTCWISCPDSSVKIASDEKRITIVTGIDYDHCKGCGICARECPPKIKAITMEHEKK
SIO_010081: H0I88_RS01950
subclass of: SO_0000673
so part of: H0I88_RS01950
location: 419992..420303
location: region:419992-420303:1
so has part: feature:419992-420303:1:exon

WP_015423289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419992-420303:1:exon

H0I88_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01955
old locus tag: TGRD_278
old locus tag: TGRD_280
old locus tag: TGRD_RS01925
so part of: sequence
location: 420338..421543
location: region:420338-421543:1
so has part: feature:420338-421543:1:exon
subclass of: SO_0000010

position:420338:1
position: 420338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421543:1
position: 421543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420338-421543:1:exon

H0I88_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01955
old locus tag: TGRD_278
old locus tag: TGRD_280
old locus tag: TGRD_RS01925
inference: COORDINATES: protein motif:HMM:NF013974.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
translation: MIKTVYSKGKLVAKTGNEVVAEAMRQIEPDVVAAYPITPATEIVQIFSQFVADGIVKSEYVAVESEHSAMSATIGASAAGARAMTGTSSQGLSLMWEMLYIASGLRLPIVMAEVNRAISAPINIHGDQSDTMGARDAGWIQIYSENSQEAYDNMIQATRIAEKAKLPTLVTTDGFIISHCMEVVETYPDADVKAFIGKYEPERYLLDIKKPYTLGSIDLQDYYFEHRYQLAQAMRNAKNIVLDVAKDFEKTFGRKYDLCEKYMLDDAEIAIAVIGSTAGTAKVVVNELREKGIKAGLLKIRVYRPFPAEEIAKDLAHVKAVAVMDRADSCSGAFAPVYSDIVASLYASGVTNPKVVNYVYGLGGREINTGHIIGIYEMLCKIASGTEKSSNKVEYINVRIK
SIO_010081: H0I88_RS01955
subclass of: SO_0000673
so part of: H0I88_RS01955
location: 420338..421543
location: region:420338-421543:1
so has part: feature:420338-421543:1:exon

WP_015423290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420338-421543:1:exon

H0I88_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01960
old locus tag: TGRD_279
old locus tag: TGRD_281
old locus tag: TGRD_RS01930
so part of: sequence
location: 421737..422672
location: region:421737-422672:1
so has part: feature:421737-422672:1:exon
subclass of: SO_0000010

position:421737:1
position: 421737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422672:1
position: 422672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422672:1:exon

H0I88_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01960
old locus tag: TGRD_279
old locus tag: TGRD_281
old locus tag: TGRD_RS01930
inference: COORDINATES: protein motif:HMM:NF014794.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent enzyme
translation: MANLKELSKNPERLTGGHRLCAGCGAGIVARQTLIAAGSTPVVITNATGCLEVSTTVFPYTAWKDSFFHSAFENSAATCSGIETAYRSLKAQGKIKDDIRFITFGGDGGTYDIGLQSLSGAMERGHRMLYICYNNEAYMNTGIQRSGATPKGAHTTTAPAGKVRQGKEQNKKDLTQIMIAHDIPYVAQAYVGNWNDFITKVQKALAVDGPSFINILTPCRLGWAYKPEDTMLISRLAVETCVWPSFEVENGVYKINVIPKEKKPVIEFLKLQGRFKHLFRSDNAHILETIQKGVDEKWDLLQRRSAVGCRA
SIO_010081: H0I88_RS01960
subclass of: SO_0000673
so part of: H0I88_RS01960
location: 421737..422672
location: region:421737-422672:1
so has part: feature:421737-422672:1:exon

WP_015423291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422672:1:exon

H0I88_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: aroC
locus tag: H0I88_RS01965
old locus tag: TGRD_280
old locus tag: TGRD_282
old locus tag: TGRD_RS01935
so part of: sequence
location: 422935..424092
location: region:422935-424092:1
so has part: feature:422935-424092:1:exon
subclass of: SO_0000010

position:422935:1
position: 422935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424092:1
position: 424092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422935-424092:1:exon

H0I88_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: aroC
locus tag: H0I88_RS01965
old locus tag: TGRD_280
old locus tag: TGRD_282
old locus tag: TGRD_RS01935
EC number: 4.2.3.5
inference: COORDINATES: protein motif:HMM:TIGR00033.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MIRFTTAGESHGEGLFVIIEGIPAGLTINSEDIDLELARRQKGYGRGQRMCIETDTVKVFSGMRHTVSLGSPIAMYIANKDFKNWTKIMSPTSVDSEVTPLLRPRPGHADLPGFMKYGVNDFRDILERASARETAARVAAGAVCKALLKEFEISIVSYTSQIGDVTADISSVEECKIWHDAEISCVRCPDAKASEKMIQLIKKAGEKGDTLGGKVVVVTKNVPAGLGSHTQWDLKLDGRLAQSLISIQAVKAVEFGAGTKLASLLGALSHDEIFYDVTRGFYRDTNRAGGIEGGMSNGEPIVVTCTMKAIPSLANPLHSVNLATKETAEAEAIRSDVCAVPAVGIVAEAAIAVELAKALKEKFGGDSLKDMKKNVNIYKERIKAL
SIO_010081: H0I88_RS01965
subclass of: SO_0000673
so part of: H0I88_RS01965
location: 422935..424092
location: region:422935-424092:1
so has part: feature:422935-424092:1:exon

WP_015423292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422935-424092:1:exon

H0I88_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01970
old locus tag: TGRD_281
old locus tag: TGRD_283
old locus tag: TGRD_RS01940
so part of: sequence
location: 424093..424608
location: region:424093-424608:1
so has part: feature:424093-424608:1:exon
subclass of: SO_0000010

position:424093:1
position: 424093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424608:1
position: 424608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424093-424608:1:exon

H0I88_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01970
old locus tag: TGRD_281
old locus tag: TGRD_283
old locus tag: TGRD_RS01940
EC number: 2.7.1.71
inference: COORDINATES: protein motif:HMM:NF013375.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase
translation: MNLVFTGFMGTGKSNTGKIISEKLKMSFFDTDDLVEKKSGFSISDIFKKFGEANFRKMEAETIKEVSEKDSVVISCGGGAVLNPANIANLRKKGIIINLYALAEVIYDRLKDENNRPLLRCEKPLVEIKKLLDFRKSVYADCDFSFDTDGLTAVEVADKVLNNDVIKRLLL
SIO_010081: H0I88_RS01970
subclass of: SO_0000673
so part of: H0I88_RS01970
location: 424093..424608
location: region:424093-424608:1
so has part: feature:424093-424608:1:exon

WP_015423293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424093-424608:1:exon

H0I88_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01975
old locus tag: TGRD_284
old locus tag: TGRD_pseudo_52
old locus tag: TGRD_RS01945
so part of: sequence
location: 424659..425000
location: region:424659-425000:1
so has part: feature:424659-425000:1:exon
subclass of: SO_0000010

position:424659:1
position: 424659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425000:1
position: 425000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424659-425000:1:exon

H0I88_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01975
old locus tag: TGRD_284
old locus tag: TGRD_pseudo_52
old locus tag: TGRD_RS01945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFRKMLGSLLLVFISISLSFASKTYLIDTTTTDILSYGSYDVGFRFFSNGNVLSRIDFVVFKLLNVGLSLELDRIIECSHIKIAIPALHVKFRVYDGIMPLPVVAAGYDGIR
SIO_010081: H0I88_RS01975
subclass of: SO_0000673
so part of: H0I88_RS01975
location: 424659..425000
location: region:424659-425000:1
so has part: feature:424659-425000:1:exon

WP_125266979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424659-425000:1:exon

H0I88_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01980
old locus tag: TGRD_RS01950
so part of: sequence
location: 424987..425178
location: region:424987-425178:1
so has part: feature:424987-425178:1:exon
subclass of: SO_0000010

position:424987:1
position: 424987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425178:1
position: 425178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424987-425178:1:exon

H0I88_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01980
old locus tag: TGRD_RS01950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEYDNISYFPKLSIEAARLNFGLRFSLTKYISVDFIARDCFVAKDLNRFPGERVFKVICSSKF
SIO_010081: H0I88_RS01980
subclass of: SO_0000673
so part of: H0I88_RS01980
location: 424987..425178
location: region:424987-425178:1
so has part: feature:424987-425178:1:exon

WP_095558721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424987-425178:1:exon

H0I88_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01985
old locus tag: TGRD_282
old locus tag: TGRD_285
old locus tag: TGRD_RS01955
so part of: sequence
location: 425189..426172
location: region:425189-426172:1
so has part: feature:425189-426172:1:exon
subclass of: SO_0000010

position:425189:1
position: 425189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426172:1
position: 426172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425189-426172:1:exon

H0I88_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01985
old locus tag: TGRD_282
old locus tag: TGRD_285
old locus tag: TGRD_RS01955
EC number: 6.4.1.2
inference: COORDINATES: protein motif:HMM:NF004344.0
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyltransferase subunit alpha
translation: METSFDFEKPIAEINNRIDDLKESSRVGNIDLLAQIEDLEKTRDELRQKIYGSLTAWQRIQIARHPKRPYSADYVKLIFKDFIELHGDRIFGDDQAILCGIAAFNDNPVVVIGHQKGRTLQENMDRNFGMAHPEGYRKAMRIMKLAGKFNRPIITFIDTSGAYPGIAAEERGQAEAIARNLRDMSNLKVPIISIVIGEGGSGGALGIGVSNKVLCLENAYYSVISPEGCAAILFRDGSKASEAAQAMKITAKDLLNLKVIDGIIKEPLGGAHYDPVATAANIKAVLNEYLCKYETMSCKEIADERYLKFRKMGIYEDVAEEKMNVKK
SIO_010081: H0I88_RS01985
subclass of: SO_0000673
so part of: H0I88_RS01985
location: 425189..426172
location: region:425189-426172:1
so has part: feature:425189-426172:1:exon

WP_015423295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425189-426172:1:exon

H0I88_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS01990
old locus tag: TGRD_RS01960
so part of: sequence
location: 426376..426561
location: region:426376-426561:1
so has part: feature:426376-426561:1:exon
subclass of: SO_0000010

position:426376:1
position: 426376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426561:1
position: 426561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426376-426561:1:exon

H0I88_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS01990
old locus tag: TGRD_RS01960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKAFVVLLMASFLVSGCGKPGNKVVLSSDLVTDLKNKIDEIEQKVSNIGQLQTSQAKTIY
SIO_010081: H0I88_RS01990
subclass of: SO_0000673
so part of: H0I88_RS01990
location: 426376..426561
location: region:426376-426561:1
so has part: feature:426376-426561:1:exon

WP_095558722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426376-426561:1:exon

H0I88_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: fba
locus tag: H0I88_RS01995
old locus tag: TGRD_283
old locus tag: TGRD_286
old locus tag: TGRD_RS01965
so part of: sequence
location: 426990..427985
location: region:426990-427985:1
so has part: feature:426990-427985:1:exon
subclass of: SO_0000010

position:426990:1
position: 426990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427985:1
position: 427985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426990-427985:1:exon

H0I88_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: fba
locus tag: H0I88_RS01995
old locus tag: TGRD_283
old locus tag: TGRD_286
old locus tag: TGRD_RS01965
EC number: 4.1.2.13
inference: COORDINATES: protein motif:HMM:TIGR00167.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-1,6-bisphosphate aldolase
translation: MALVSGKQILEEAKKKGYGVGAYNVNNMEQIQAIMAAAKETQSPVIIQASRGALKYSNFTYLGYLMKAAIIENPDIPIVMHLDHGNSLESAIKAIDLGFSSVMIDGSLLEDGKTASTYDYNIKVTRSVVEYAHARGVSVEAEIGTLGGIEDGVGSGKIHLTDPKEAERFVNETDVDSLAIAIGTSHGAYKFKGAANLAFDVLKEIRALIDIPIVLHGASSVPKELTGEVNKYGGKMPGATGVPMSNLQEAIKLGVSKINVDTDGRLALTAAIRKVFTESPEKFDPRDYLGPARTALTNLIITKMKDFGTAGHARDYAPKSLEDIKKLYLSK
SIO_010081: H0I88_RS01995
subclass of: SO_0000673
so part of: H0I88_RS01995
location: 426990..427985
location: region:426990-427985:1
so has part: feature:426990-427985:1:exon

WP_015423296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426990-427985:1:exon

H0I88_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02000
old locus tag: TGRD_284
old locus tag: TGRD_287
old locus tag: TGRD_RS01970
so part of: sequence
location: 429205..430557
location: region:429205-430557:1
so has part: feature:429205-430557:1:exon
subclass of: SO_0000010

position:429205:1
position: 429205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430557:1
position: 430557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429205-430557:1:exon

H0I88_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02000
old locus tag: TGRD_284
old locus tag: TGRD_287
old locus tag: TGRD_RS01970
inference: COORDINATES: protein motif:HMM:NF015882.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent malic enzyme
translation: MKKQKKVDVNKLLKAAEEPSKIARKLHPFYRGKIEVVPKCRVKDFNDFSIWYSPGVAAVCTDIYKNPELVYEYTNKWNSVAVVSDGTRVLGLGDIGPEAGMPVMEGKALLYKYLGGVDAYPICLDTKDEKEIIQTVKILQPSFGGVNLEDIEQPKCFPVLNTLRKECRIPVWHDDQQGTALVTLAGFINALKVVGKKIEKVKIAMLGAGAANICISRLLILYGANPANIIMVDLCGTLHKKRVDLKMCPEKWTLAVDTNVNAVHGGIKEAMENADAVIALSSPGPGVIDKKWIERMAKNPIVFTCANPVPEIWPWEAKEAGAAVVATGRSDFANQVNNSLGFPGVFRGALDVRASTITDTMCITAATELASCIADNEIKPDKILPTMDDWEIFPKVAAALGIKAIKEKVAGKKLSYDKIFNDAKSIIKRSRAITEGMMKSGYIKSAKDKI
SIO_010081: H0I88_RS02000
subclass of: SO_0000673
so part of: H0I88_RS02000
location: 429205..430557
location: region:429205-430557:1
so has part: feature:429205-430557:1:exon

WP_015423297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429205-430557:1:exon

H0I88_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02005
old locus tag: TGRD_285
old locus tag: TGRD_288
old locus tag: TGRD_RS01975
so part of: sequence
location: 430538..431377
location: region:430538-431377:1
so has part: feature:430538-431377:1:exon
subclass of: SO_0000010

position:430538:1
position: 430538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431377:1
position: 431377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430538-431377:1:exon

H0I88_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02005
old locus tag: TGRD_285
old locus tag: TGRD_288
old locus tag: TGRD_RS01975
EC number: 4.2.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293276.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate hydratase
translation: MRKIKSEIIINAIENLCAETNFKLPADVLKSLEQNIVLEKDTAKDILKEIIENADIARKEQIPLCQDTGTANFFIKLGRDTEIENGDIYAAVNKGVSLGYTNSYLRKSVASNPLERKNTKDNTPANIYIDLVSGDKIEITFLPKGGGSENASALKMLVPSVGWDGIREFVLSAVDDKGRNACPPLVVGIGIGGDFASVGLMSKKALLREIGSENKNVFYVGKEMELLNDINKLNIGPMGMGGKTTALAVFIEAKPVHIASLPVAVNIQCHSCRRKTVMI
SIO_010081: H0I88_RS02005
subclass of: SO_0000673
so part of: H0I88_RS02005
location: 430538..431377
location: region:430538-431377:1
so has part: feature:430538-431377:1:exon

WP_015423298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430538-431377:1:exon

H0I88_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02010
old locus tag: TGRD_286
old locus tag: TGRD_289
old locus tag: TGRD_RS01980
so part of: sequence
location: 431374..431895
location: region:431374-431895:1
so has part: feature:431374-431895:1:exon
subclass of: SO_0000010

position:431374:1
position: 431374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431895:1
position: 431895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431374-431895:1:exon

H0I88_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02010
old locus tag: TGRD_286
old locus tag: TGRD_289
old locus tag: TGRD_RS01980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006785305.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FumA C-terminus/TtdB family hydratase beta subunit
translation: MKIDLLDLVLNPKMLKAGQRILLSGTVYTARDAAHKRIIDMLDSGSAVPFNLKDAAIYYCGPSPAKPGAVIGACGPTTSSRMDIFTPRILKEGVKFLIGKGTRSESVVNSIEENSVVYLVATGGVAALLSKTVKKAALIAFEDLGPEAIYKLEVEDMPLIVAIDSDGGSVFKL
SIO_010081: H0I88_RS02010
subclass of: SO_0000673
so part of: H0I88_RS02010
location: 431374..431895
location: region:431374-431895:1
so has part: feature:431374-431895:1:exon

WP_015423299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431374-431895:1:exon

H0I88_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02015
old locus tag: TGRD_RS05880
so part of: sequence
location: 432264..432413
location: region:432264-432413:1
so has part: feature:432264-432413:1:exon
subclass of: SO_0000010

position:432264:1
position: 432264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432413:1
position: 432413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432264-432413:1:exon

H0I88_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02015
old locus tag: TGRD_RS05880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFHTTILTLQKLLKCDRVYNYVMSDGWVKSMSEKEKEDFRNEAIHTYRN
SIO_010081: H0I88_RS02015
subclass of: SO_0000673
so part of: H0I88_RS02015
location: 432264..432413
location: region:432264-432413:1
so has part: feature:432264-432413:1:exon

WP_158302781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432264-432413:1:exon

H0I88_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02020
old locus tag: TGRD_RS01985
so part of: sequence
location: 432948..433238
location: region:432948-433238:1
so has part: feature:432948-433238:1:exon
subclass of: SO_0000010

position:432948:1
position: 432948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433238:1
position: 433238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432948-433238:1:exon

H0I88_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02020
old locus tag: TGRD_RS01985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLIAGALALMMFAGAAFSEGETWSQIELENAKKNPKSWTFIEYFKVVRSAYVSEAQEEEYPATTKKYIFVSTQIQDLIDHLRAAYANSSTVWKK
SIO_010081: H0I88_RS02020
subclass of: SO_0000673
so part of: H0I88_RS02020
location: 432948..433238
location: region:432948-433238:1
so has part: feature:432948-433238:1:exon

WP_095558723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432948-433238:1:exon

H0I88_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02025
old locus tag: TGRD_pseudo_55
old locus tag: TGRD_RS01990
so part of: sequence
location: 433425..433676
location: region:433425-433676:1
so has part: feature:433425-433676:1:exon
subclass of: SO_0000010

position:433425:1
position: 433425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433676:1
position: 433676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433425-433676:1:exon

H0I88_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02025
old locus tag: TGRD_pseudo_55
old locus tag: TGRD_RS01990
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MRFNSGGKFNRKYLKNDFVYLDSPYLIAASEYNKLWNEKSEEYLLRILDGLNEQGVRFALSNIMYYKGSKNNMLLSWMEKYNT
SIO_010081: H0I88_RS02025
subclass of: SO_0000673
so part of: H0I88_RS02025
location: 433425..433676
location: region:433425-433676:1
so has part: feature:433425-433676:1:exon

WP_095558724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433425-433676:1:exon

H0I88_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02030
old locus tag: TGRD_RS01995
so part of: sequence
location: 434096..434356
location: region:434096-434356:1
so has part: feature:434096-434356:1:exon
subclass of: SO_0000010

position:434096:1
position: 434096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434356:1
position: 434356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434096-434356:1:exon

H0I88_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02030
old locus tag: TGRD_RS01995
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF021040.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AlwI family type II restriction endonuclease
translation: MFNKKASKDEILKIVEQLLRLEFLISLAILKKLKNVTVKPNFVSDDEGLPTSFASGGKPDIEYFENDDTVLVEVTITTYKRIFFCS
SIO_010081: H0I88_RS02030
subclass of: SO_0000673
so part of: H0I88_RS02030
location: 434096..434356
location: region:434096-434356:1
so has part: feature:434096-434356:1:exon

WP_095558725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434096-434356:1:exon

H0I88_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02035
old locus tag: TGRD_287
old locus tag: TGRD_290
old locus tag: TGRD_RS02000
so part of: sequence
location: 435054..435833
location: region:435054-435833:1
so has part: feature:435054-435833:1:exon
subclass of: SO_0000010

position:435054:1
position: 435054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435833:1
position: 435833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435054-435833:1:exon

H0I88_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02035
old locus tag: TGRD_287
old locus tag: TGRD_290
old locus tag: TGRD_RS02000
EC number: 2.7.1.33
inference: COORDINATES: protein motif:HMM:NF009855.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MFLALDIGNTNITVGLFAMKDKKVLPEPLKVWIMSTVKERTFDEYATLLMNMLFYDGFDAKQLSNFAVASVVPSLNAVFEELIKKYFGEKTFFVNSKNCGGLVFAAGNSKETGADRIANVVAAYSVYGDSCIVIDFGTATTFDCINSEGIYIGGAIAPGPSISARLLNLKTEQLPRVEVKKPLKSIGLTTVECMQSGLYFGYTGLVKELIARIKNEMKIKHIIATGGLAGLMFDEIEEIEIILPYLTLSGVRIVWEKVI
SIO_010081: H0I88_RS02035
subclass of: SO_0000673
so part of: H0I88_RS02035
location: 435054..435833
location: region:435054-435833:1
so has part: feature:435054-435833:1:exon

WP_015423300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435054-435833:1:exon

H0I88_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: infC
locus tag: H0I88_RS02040
old locus tag: TGRD_288
old locus tag: TGRD_291
old locus tag: TGRD_RS02005
so part of: sequence
location: 436560..437108
location: region:436560-437108:1
so has part: feature:436560-437108:1:exon
subclass of: SO_0000010

position:436560:1
position: 436560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437108:1
position: 437108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436560-437108:1:exon

H0I88_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: infC
locus tag: H0I88_RS02040
old locus tag: TGRD_288
old locus tag: TGRD_291
old locus tag: TGRD_RS02005
inference: COORDINATES: protein motif:HMM:TIGR00168.2
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MTSFVRGGFVENRKFRINQFIKVPEVRLVDFDGTMIGVIKTADALAKAQAKDLDLVEISPQANPPVCRIINFSKFKYEMEKKEKEARKKQKIFHIKEVRIRPRISDHDLEVKIKHAREFIDGGDKVQLTALFSGREMQHKDLGIKIMERIKESLADIACPERKVYSMGMRVFLTLVPKNKIK
SIO_010081: H0I88_RS02040
subclass of: SO_0000673
so part of: H0I88_RS02040
location: 436560..437108
location: region:436560-437108:1
so has part: feature:436560-437108:1:exon

WP_015423301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436560-437108:1:exon

H0I88_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpmI
locus tag: H0I88_RS02045
old locus tag: TGRD_289
old locus tag: TGRD_292
old locus tag: TGRD_RS02010
so part of: sequence
location: 437203..437394
location: region:437203-437394:1
so has part: feature:437203-437394:1:exon
subclass of: SO_0000010

position:437203:1
position: 437203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437394:1
position: 437394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437203-437394:1:exon

H0I88_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpmI
locus tag: H0I88_RS02045
old locus tag: TGRD_289
old locus tag: TGRD_292
old locus tag: TGRD_RS02010
inference: COORDINATES: protein motif:HMM:TIGR00001.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MKQHSGAKKRFKVTGKGKVKYKKPGQRHLLTGDSGNQNRKARKPAIVTKSDMKTMKKIMSYSF
SIO_010081: H0I88_RS02045
subclass of: SO_0000673
so part of: H0I88_RS02045
location: 437203..437394
location: region:437203-437394:1
so has part: feature:437203-437394:1:exon

WP_015423302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437203-437394:1:exon

H0I88_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplT
locus tag: H0I88_RS02050
old locus tag: TGRD_290
old locus tag: TGRD_293
old locus tag: TGRD_RS02015
so part of: sequence
location: 437420..437767
location: region:437420-437767:1
so has part: feature:437420-437767:1:exon
subclass of: SO_0000010

position:437420:1
position: 437420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437767:1
position: 437767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437420-437767:1:exon

H0I88_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplT
locus tag: H0I88_RS02050
old locus tag: TGRD_290
old locus tag: TGRD_293
old locus tag: TGRD_RS02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MRAKSVVYTRQRKKKIFRLAKGSYATKKNHWRMVIQQVERSLNYAYTGRKDNKANFRTLWIVRLNAAVREEGISYNRFIFGLKKANVAIDRKMLAEIAVNDNTAFKQLVEVVKAA
SIO_010081: H0I88_RS02050
subclass of: SO_0000673
so part of: H0I88_RS02050
location: 437420..437767
location: region:437420-437767:1
so has part: feature:437420-437767:1:exon

WP_015423303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437420-437767:1:exon

H0I88_RS06375
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06375
pseudo: true
so part of: sequence
location: 437843..438493
location: region:437843-438493:1
so has part: feature:437843-438493:1:exon
subclass of: SO_0000010

position:437843:1
position: 437843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438493:1
position: 438493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437843-438493:1:exon

H0I88_RS06375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06375
inference: COORDINATES: protein motif:HMM:NF014443.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: H0I88_RS06375
subclass of: SO_0000673
so part of: H0I88_RS06375
location: 437843..438493
location: region:437843-438493:1
so has part: feature:437843-438493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437843-438493:1:exon

H0I88_RS06380
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06380
so part of: sequence
location: 438409..439077
location: region:438409-439077:1
so has part: feature:438409-439077:1:exon
subclass of: SO_0000010

position:438409:1
position: 438409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439077:1
position: 439077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438409-439077:1:exon

H0I88_RS06380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06380
inference: COORDINATES: protein motif:HMM:NF014443.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium transporter TrkG
translation: MDAYKSCSFPIGSDYIFCIYIFLFSDTLKGNGVFYSINNAFFQTVSARTAGFYSVPVNLFSEFIDVILLFLMSVGASPGGTVRGIKVTSLALVFIFVRSLLKGDEDFVLFKRRVPVDIVKKALAVFIIFFVSITFFSAILVLLESCLKPLDVVFEVVSVFATVGLSLGITADLSVEGKVLIIIAVIVGRIGILTLFILVLDSVGKRKSVRYPEARVLVGKVN
SIO_010081: H0I88_RS06380
subclass of: SO_0000673
so part of: H0I88_RS06380
location: 438409..439077
location: region:438409-439077:1
so has part: feature:438409-439077:1:exon

WP_095558729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438409-439077:1:exon

H0I88_RS06385
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06385
so part of: sequence
location: 439101..439226
location: region:439101-439226:1
so has part: feature:439101-439226:1:exon
subclass of: SO_0000010

position:439101:1
position: 439101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439226:1
position: 439226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439101-439226:1:exon

H0I88_RS06385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMKFYEQPGCFKKLPFHYDKRIIDEKETMSLRICGNDMQI
SIO_010081: H0I88_RS06385
subclass of: SO_0000673
so part of: H0I88_RS06385
location: 439101..439226
location: region:439101-439226:1
so has part: feature:439101-439226:1:exon

WP_269763549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439101-439226:1:exon

H0I88_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02070
old locus tag: TGRD_RS05885
so part of: sequence
location: 439351..439521
location: region:439351-439521:1
so has part: feature:439351-439521:1:exon
subclass of: SO_0000010

position:439351:1
position: 439351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439521:1
position: 439521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439351-439521:1:exon

H0I88_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02070
old locus tag: TGRD_RS05885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDATAKSQKYIDGYKERTLAQTTEGLFIVMSENKQIQEEALKSFEEYRNRNFEVKV
SIO_010081: H0I88_RS02070
subclass of: SO_0000673
so part of: H0I88_RS02070
location: 439351..439521
location: region:439351-439521:1
so has part: feature:439351-439521:1:exon

WP_158302782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439351-439521:1:exon

H0I88_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02075
old locus tag: TGRD_RS02030
so part of: sequence
location: 439638..440003
location: region:439638-440003:1
so has part: feature:439638-440003:1:exon
subclass of: SO_0000010

position:439638:1
position: 439638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440003:1
position: 440003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439638-440003:1:exon

H0I88_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02075
old locus tag: TGRD_RS02030
inference: COORDINATES: protein motif:HMM:NF014325.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA family potassium uptake protein
translation: MGLGTFGYNVAVELVKKDIQVLAIDNDSEAVNRISRFVTQALVADATDEKVTEDAGVAYCDSVVISIGGSIETSILSTLIVKELGVKNVIVKSSSRWHSKVVAKLGVDTVVYPEFEMAKNL
SIO_010081: H0I88_RS02075
subclass of: SO_0000673
so part of: H0I88_RS02075
location: 439638..440003
location: region:439638-440003:1
so has part: feature:439638-440003:1:exon

WP_269763551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439638-440003:1:exon

H0I88_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02080
old locus tag: TGRD_RS02035
so part of: sequence
location: 440015..440224
location: region:440015-440224:1
so has part: feature:440015-440224:1:exon
subclass of: SO_0000010

position:440015:1
position: 440015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440224:1
position: 440224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440015-440224:1:exon

H0I88_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02080
old locus tag: TGRD_RS02035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNILEQIELSKDYNLVEVVAPKEIWGKTIKNSSVISNYGVNIIAMRKRIPIIDDDGQSDIKEERMINE
SIO_010081: H0I88_RS02080
subclass of: SO_0000673
so part of: H0I88_RS02080
location: 440015..440224
location: region:440015-440224:1
so has part: feature:440015-440224:1:exon

WP_095558731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440015-440224:1:exon

H0I88_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02085
old locus tag: TGRD_291
old locus tag: TGRD_294
old locus tag: TGRD_RS02040
so part of: sequence
location: 440217..440501
location: region:440217-440501:1
so has part: feature:440217-440501:1:exon
subclass of: SO_0000010

position:440217:1
position: 440217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440501:1
position: 440501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440217-440501:1:exon

H0I88_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02085
old locus tag: TGRD_291
old locus tag: TGRD_294
old locus tag: TGRD_RS02040
inference: COORDINATES: protein motif:HMM:NF024816.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSNDIKNMFSNELDHIELGKFYFLNNKYDEAVSEFKKVLEINPANAETYYNIGLIRESSNQMGEAREMYSKALAVKPDYKIVRVRLNKLIGIKS
SIO_010081: H0I88_RS02085
subclass of: SO_0000673
so part of: H0I88_RS02085
location: 440217..440501
location: region:440217-440501:1
so has part: feature:440217-440501:1:exon

WP_015423304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440217-440501:1:exon

H0I88_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pheS
locus tag: H0I88_RS02090
old locus tag: TGRD_292
old locus tag: TGRD_295
old locus tag: TGRD_RS02045
so part of: sequence
location: 440587..441606
location: region:440587-441606:1
so has part: feature:440587-441606:1:exon
subclass of: SO_0000010

position:440587:1
position: 440587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441606:1
position: 441606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440587-441606:1:exon

H0I88_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pheS
locus tag: H0I88_RS02090
old locus tag: TGRD_292
old locus tag: TGRD_295
old locus tag: TGRD_RS02045
EC number: 6.1.1.20
inference: COORDINATES: protein motif:HMM:TIGR00468.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MDDIKQIIDRALAEIKNADLAVLEDIKTRYLGKNGVLTQILKSLLQYSIEDKRIIGLETNGAKDIIVSEIEKRKKSLKKVLLDEKMHKEKLDYSPSFYFPFSKGSFHPVVQTIKNISSVFKLLGFSIVEGPEIETDWYNFEALNIPESHPSRDAQDTFYIEGMKNLLRTHTSPVQIHVMEKQNPPVKVIVPGRVYRNEASDASHSSTFHQIEGFEVDENISFVDLKAVLINFIHQFFGSELGVRFRPSHFQFTEPSAEVDIQCFFCNCGGCRICKNSGWIEVLGCGMVHPDVLKTVNYDSEKYTGYAFGMGVERITMLKYGIDDIRLLYENDLRFLKQF
SIO_010081: H0I88_RS02090
subclass of: SO_0000673
so part of: H0I88_RS02090
location: 440587..441606
location: region:440587-441606:1
so has part: feature:440587-441606:1:exon

WP_015423305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440587-441606:1:exon

H0I88_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pheT
locus tag: H0I88_RS02095
old locus tag: TGRD_293
old locus tag: TGRD_296
old locus tag: TGRD_RS02050
so part of: sequence
location: 441838..444291
location: region:441838-444291:1
so has part: feature:441838-444291:1:exon
subclass of: SO_0000010

position:441838:1
position: 441838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444291:1
position: 444291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441838-444291:1:exon

H0I88_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pheT
locus tag: H0I88_RS02095
old locus tag: TGRD_293
old locus tag: TGRD_296
old locus tag: TGRD_RS02050
EC number: 6.1.1.20
inference: COORDINATES: protein motif:HMM:TIGR00472.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MAELAHVDLDFLCRCPELTGKIRNWGMKLSYKWLKKFIDFELSPQELASMLISVGIETSVVSTGCDWHSVVTVKVLEVLKHPGADRLSLCKVNDGSKDYSIVCGAKNIAAGQIVPLAKIGAVLPGNFKINKSKIRGIVSEGMICSEADLGLKKESDGILMLDKNTKIGVALENVLSGLDSILEIEITTNRGDCLSHLGVAREIGAKLRKILSFPTMIKTFNIPYLNCVEVKSDLCHRYIGSVISGVKICPSPGWITDALEKSGIRPVNNVVDVTNYVMIELGQPLHTFDITKLSSRKVVVRKAVDYEKIIALDGKEYKLDSEMLVIADSEKPVAIAGVMGGEYSAIDEKTETVFLESAIFDAVSIRKTSKKLNLSSGSSYRFERGLGWDITELASWRAANLIIEIAGGRMDAREDLQIVKYERADIALRVEKVSKILGCVVKEAEITEILRFLGIDLRSRGTIILCTVPSWRNDIKKEVDLIEEIARIKGYDAITSPGKRCTATAEVCVSDNSLLHAVVEEFRVKLNGFSFSEVLNYSFSEITELEKFDLKYYYKIANPISKENEVLRPSLLPALYKNLLLNIEWGSETVTLFEYGKIFTGLGERKAFAVIMYGKVWQEWWKWAEQKNSPKYDFYFGGGIVRNILPSDEFIIAENLNAESYYHSGKTASVVYKGKPVGQFGVLKPSITSDIAGDVFYFEVNLESFENVCAGKKSLYKAYSKFPEVKRDISITADKTLQFSEIEKVIKNVIKSGGILKEYSLFSVYSDESKVGDGKISYSFRLSYKNSEKTLTNEEVNKDMNVLLQKLDADFGVKLRR
SIO_010081: H0I88_RS02095
subclass of: SO_0000673
so part of: H0I88_RS02095
location: 441838..444291
location: region:441838-444291:1
so has part: feature:441838-444291:1:exon

WP_095558732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441838-444291:1:exon

H0I88_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02100
old locus tag: TGRD_294
old locus tag: TGRD_297
old locus tag: TGRD_RS02055
so part of: sequence
location: 444888..446393
location: region:444888-446393:1
so has part: feature:444888-446393:1:exon
subclass of: SO_0000010

position:444888:1
position: 444888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446393:1
position: 446393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444888-446393:1:exon

H0I88_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02100
old locus tag: TGRD_294
old locus tag: TGRD_297
old locus tag: TGRD_RS02055
inference: COORDINATES: protein motif:HMM:NF014910.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MIIKRDKDIIQNYFEDNSGVIGSSADFVALTETEDDISGFLVEMSKSKTPVTVVGSLTGNTASGLAFGGSVLSLENLNNISEIKEIDDKNALITVQAGAKIHDIKLKAFNGGWMYPPDPTEKNASIGGNISTNASGGRGFKFGVTRDYIKALKVIFSDGSQSYIERGKYFADKNGGITFDTNKGKKHILLPKYHLPAIKNVTGYYNYPAADLMDVFIGSDGTLCVIVKAVLKLIPSFKEVFGGIIFFESRNSAYEFVNKIKIISKNTEKENLKDSISAMSLEYFDKNALLMIKNYYPVIPENIEAGIMFEQDIYEDNFDILMEKWVEAISDSGIDLEKVWFASNFAQQEEFRVFRHRIPECVNEIVRKNKIPKSGTDFAVPEGKLPEIVDFCDREFKKSGIFNLTFGHIGENHLHANIIASNKEEYERCRRICVDIAQKAVELGGTVSAEHGIGKLKHILLEKMLGEKGFKEMAKFKKSIDESGILGQDNIFPKNYIQRIQ
SIO_010081: H0I88_RS02100
subclass of: SO_0000673
so part of: H0I88_RS02100
location: 444888..446393
location: region:444888-446393:1
so has part: feature:444888-446393:1:exon

WP_015423307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444888-446393:1:exon

H0I88_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02105
old locus tag: TGRD_RS05890
so part of: sequence
location: complement(446443..446586)
location: region:446443-446586:-1
so has part: feature:446443-446586:-1:exon
subclass of: SO_0000010

position:446443:-1
position: 446443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446586:-1
position: 446586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446443-446586:-1:exon

H0I88_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02105
old locus tag: TGRD_RS05890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPANVYLYPKFMIDLNLSDRLRRLSFPNLNTLIELQGGGGGGDIVLA
SIO_010081: H0I88_RS02105
subclass of: SO_0000673
so part of: H0I88_RS02105
location: complement(446443..446586)
location: region:446443-446586:-1
so has part: feature:446443-446586:-1:exon

WP_158302784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446443-446586:-1:exon

H0I88_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02110
old locus tag: TGRD_298
old locus tag: TGRD_RS02060
so part of: sequence
location: 446697..447119
location: region:446697-447119:1
so has part: feature:446697-447119:1:exon
subclass of: SO_0000010

position:446697:1
position: 446697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447119:1
position: 447119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446697-447119:1:exon

H0I88_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02110
old locus tag: TGRD_298
old locus tag: TGRD_RS02060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNPANKVSAVEVSQGKTLSETVWSVANNPYVLAILMDGVISAVWYLGFYKPVMKKMSDLASVSPTEEEDERSDKSVQNLEKQLEALRFSKNGSEWLATEKTKELKSLEKPVRGISYRFTWFSRQTGNGRGVASSNYQSN
SIO_010081: H0I88_RS02110
subclass of: SO_0000673
so part of: H0I88_RS02110
location: 446697..447119
location: region:446697-447119:1
so has part: feature:446697-447119:1:exon

WP_015423308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446697-447119:1:exon

H0I88_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: trpS
locus tag: H0I88_RS02115
old locus tag: TGRD_295
old locus tag: TGRD_299
old locus tag: TGRD_RS02070
so part of: sequence
location: 448339..449364
location: region:448339-449364:1
so has part: feature:448339-449364:1:exon
subclass of: SO_0000010

position:448339:1
position: 448339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449364:1
position: 449364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448339-449364:1:exon

H0I88_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: trpS
locus tag: H0I88_RS02115
old locus tag: TGRD_295
old locus tag: TGRD_299
old locus tag: TGRD_RS02070
EC number: 6.1.1.2
inference: COORDINATES: protein motif:HMM:TIGR00233.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MFFRVKQKENFKINRENYMSKVLSGMRPTGRLHLGHYFGVLMNWVKFQNECECYYMSADWHVLTTSYVDTSAVNENTLEMVADWITAGVDPEKSVFFKQSGVLYHSELFLILSMITPLSWLQRCPTYKEQISQIKNKDLSNYGFLGYPILMSADILLYKANIVPIGEDQLSHLELTRKIARRFNNFYGDTFIEPKEELTKAASVPGLDGRKMSKSYGNSILLGESDDILRDKVKSMFTDPLKIKTADPGHPCGCVVFAFHEIFGIEYKNREEECKAGAIGCMSCKKQLMEMLSEFMKPLTEKRKDLIADKAYLEKIVEAGCRKAAEIAQQTMEEIRKAMKF
SIO_010081: H0I88_RS02115
subclass of: SO_0000673
so part of: H0I88_RS02115
location: 448339..449364
location: region:448339-449364:1
so has part: feature:448339-449364:1:exon

WP_232501237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448339-449364:1:exon

H0I88_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02120
old locus tag: TGRD_296
old locus tag: TGRD_300
old locus tag: TGRD_RS02075
so part of: sequence
location: 449492..450196
location: region:449492-450196:1
so has part: feature:449492-450196:1:exon
subclass of: SO_0000010

position:449492:1
position: 449492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450196:1
position: 450196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449492-450196:1:exon

H0I88_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02120
old locus tag: TGRD_296
old locus tag: TGRD_300
old locus tag: TGRD_RS02075
inference: COORDINATES: protein motif:HMM:NF014654.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: segregation/condensation protein A
translation: MVYDIHLDTFEGPLDILLHLIKKNDLEINEIKIAEITAEYLTYLDLMQELNIDIAGEFLVMSSTLIQIKARTLIPSNNEKDILEDDSLSFLKNRLFEYQKYKELGRLLSYKIIENSQIYYRPALPINKQDFVLDATIFDLVGSFRTALTRLPENIKEIMYQEIPIETKIREILDVLEGRQYISFNDILRMQETKTALIVCFMAVLELVKNKQIVAKQSELFSEIRIYRIYNKEE
SIO_010081: H0I88_RS02120
subclass of: SO_0000673
so part of: H0I88_RS02120
location: 449492..450196
location: region:449492-450196:1
so has part: feature:449492-450196:1:exon

WP_015423310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449492-450196:1:exon

H0I88_RS06195
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06195
so part of: sequence
location: 450703..450990
location: region:450703-450990:1
so has part: feature:450703-450990:1:exon
subclass of: SO_0000010

position:450703:1
position: 450703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450990:1
position: 450990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450703-450990:1:exon

H0I88_RS06195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEIGVVVRRVVNHFDGDSIPFSTSAALPTMGCERCPIESDESVAGIERLKLKKEKTKWTFKGSKRYLFRSNFEALYMEYNAPKTRRIGYISSTS
SIO_010081: H0I88_RS06195
subclass of: SO_0000673
so part of: H0I88_RS06195
location: 450703..450990
location: region:450703-450990:1
so has part: feature:450703-450990:1:exon

WP_095558734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450703-450990:1:exon

H0I88_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: scpB
locus tag: H0I88_RS02125
old locus tag: TGRD_297
old locus tag: TGRD_301
old locus tag: TGRD_RS02085
so part of: sequence
location: 451173..451847
location: region:451173-451847:1
so has part: feature:451173-451847:1:exon
subclass of: SO_0000010

position:451173:1
position: 451173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451847:1
position: 451847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451173-451847:1:exon

H0I88_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: scpB
locus tag: H0I88_RS02125
old locus tag: TGRD_297
old locus tag: TGRD_301
old locus tag: TGRD_RS02085
inference: COORDINATES: protein motif:HMM:TIGR00281.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MMEISEVRQILEALLFVSERPLSLRELKELIKTDYTDMDNIENILNELKEKYANLNKPYEIKFVADGWTFATKPQYSLWIKKLFKEKSVLKLSPAALETLAIIAYKQPITRAEIDEIRGIESSGVIDTLLDRKLVKVAGRKEALGKPLLYGTTQDFLKHFGLAHLSELPLIEDMPKDVQQSDNEPEPELPFDGGNFGGDVSIDVIKKELAGAAENPAGSERENT
SIO_010081: H0I88_RS02125
subclass of: SO_0000673
so part of: H0I88_RS02125
location: 451173..451847
location: region:451173-451847:1
so has part: feature:451173-451847:1:exon

WP_095558735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451173-451847:1:exon

H0I88_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02130
old locus tag: TGRD_298
old locus tag: TGRD_302
old locus tag: TGRD_RS02090
so part of: sequence
location: 452166..452903
location: region:452166-452903:1
so has part: feature:452166-452903:1:exon
subclass of: SO_0000010

position:452166:1
position: 452166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452903:1
position: 452903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452166-452903:1:exon

H0I88_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02130
old locus tag: TGRD_298
old locus tag: TGRD_302
old locus tag: TGRD_RS02090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKICKFTIKTASESLKLITVASLCAFCILVSGHYYRIKNYAKTLSETLNIVVFFDKNSVDDTVISREIEATGLVSVKEYVNAVEAYSKAVERNPFLKDISVPDAAKSVQAYVLVTPKSIPYENFLSKMKNVLERISGIDEVVFDMTVFKHYTEIENLLSFCRKIFFVFAVIIFILFVFKCIFFVLEQELDTRKIVANIFSYLLSSMSGFLILWTICICARYPLLIDKVAIFSIVPFIAVLGAVLD
SIO_010081: H0I88_RS02130
subclass of: SO_0000673
so part of: H0I88_RS02130
location: 452166..452903
location: region:452166-452903:1
so has part: feature:452166-452903:1:exon

WP_125266981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452166-452903:1:exon

H0I88_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02135
old locus tag: TGRD_299
old locus tag: TGRD_303
old locus tag: TGRD_RS02095
so part of: sequence
location: 452905..454026
location: region:452905-454026:1
so has part: feature:452905-454026:1:exon
subclass of: SO_0000010

position:452905:1
position: 452905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454026:1
position: 454026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452905-454026:1:exon

H0I88_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02135
old locus tag: TGRD_299
old locus tag: TGRD_303
old locus tag: TGRD_RS02095
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MKKIFILIVLLFCSFVSLSGQSEDIKVQSKKLSEIKKSIKEKEREKNKLIRQERIFKEELTSINGSIGKTEKKLAKILVNIKTTQYNLDNFSKVYNASSSRSAVWNHVLLDDIKLFNKMTFSYEQNPVEYKIRRKSLEYKKENFEKEKKLAMISAASMKRCERSKKDLLNLQLKESKLVERYKNMLKEKKELSDIILNRRFTAEREIRTLSESAKALQRLIDKINEVNKRKRTAAVRPPAVRSGRKKSLPWPVDGKVVLGFGRNKHPDLDTYVISNGIKIEAADFSQVKSVESGIVVFAGQFRSYGKVIIIDHSDLNFSIYGLLGKMFVKLEQKVSKGAVIAELGSGEENNVLYFEIRHNNTPVDPILWLQAK
SIO_010081: H0I88_RS02135
subclass of: SO_0000673
so part of: H0I88_RS02135
location: 452905..454026
location: region:452905-454026:1
so has part: feature:452905-454026:1:exon

WP_015423313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452905-454026:1:exon

H0I88_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02140
old locus tag: TGRD_RS05765
so part of: sequence
location: 454083..454364
location: region:454083-454364:1
so has part: feature:454083-454364:1:exon
subclass of: SO_0000010

position:454083:1
position: 454083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454364:1
position: 454364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454083-454364:1:exon

H0I88_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02140
old locus tag: TGRD_RS05765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGACVIRNLSFCRQFLITDFHTSGDKNEIEKKIVFTDVFLFFYRVNTFDVVDNDKTYGKLKLMINVMELINAKYIFETDSEDLVAGTIKGILA
SIO_010081: H0I88_RS02140
subclass of: SO_0000673
so part of: H0I88_RS02140
location: 454083..454364
location: region:454083-454364:1
so has part: feature:454083-454364:1:exon

WP_145971070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454083-454364:1:exon

H0I88_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02145
old locus tag: TGRD_RS02105
so part of: sequence
location: 454571..454822
location: region:454571-454822:1
so has part: feature:454571-454822:1:exon
subclass of: SO_0000010

position:454571:1
position: 454571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454822:1
position: 454822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454571-454822:1:exon

H0I88_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02145
old locus tag: TGRD_RS02105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSRNDVLSEIEFNLARKEIKIKTIETTLFDDSMTYRFSSQSAGNIKNVLAGYKKQDIHVLILDLSNNSDGLLSGFCHNVYEG
SIO_010081: H0I88_RS02145
subclass of: SO_0000673
so part of: H0I88_RS02145
location: 454571..454822
location: region:454571-454822:1
so has part: feature:454571-454822:1:exon

WP_095558737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454571-454822:1:exon

H0I88_RS06390
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06390
so part of: sequence
location: 454806..454931
location: region:454806-454931:1
so has part: feature:454806-454931:1:exon
subclass of: SO_0000010

position:454806:1
position: 454806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454931:1
position: 454931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454806-454931:1:exon

H0I88_RS06390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFMKDKIFILTVKSRVEEMKKEYFTPPLVTESFLIFLLLYL
SIO_010081: H0I88_RS06390
subclass of: SO_0000673
so part of: H0I88_RS06390
location: 454806..454931
location: region:454806-454931:1
so has part: feature:454806-454931:1:exon

WP_269763550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454806-454931:1:exon

H0I88_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02150
old locus tag: TGRD_RS05895
so part of: sequence
location: 454969..455115
location: region:454969-455115:1
so has part: feature:454969-455115:1:exon
subclass of: SO_0000010

position:454969:1
position: 454969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455115:1
position: 455115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454969-455115:1:exon

H0I88_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02150
old locus tag: TGRD_RS05895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLERETFSLLCPWSNGVALRLTVAEHYLPPGRFINCSDNKNVKKGII
SIO_010081: H0I88_RS02150
subclass of: SO_0000673
so part of: H0I88_RS02150
location: 454969..455115
location: region:454969-455115:1
so has part: feature:454969-455115:1:exon

WP_158302785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454969-455115:1:exon

H0I88_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02155
old locus tag: TGRD_300
old locus tag: TGRD_304
old locus tag: TGRD_RS02110
so part of: sequence
location: 455371..455808
location: region:455371-455808:1
so has part: feature:455371-455808:1:exon
subclass of: SO_0000010

position:455371:1
position: 455371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455808:1
position: 455808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455371-455808:1:exon

H0I88_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02155
old locus tag: TGRD_300
old locus tag: TGRD_304
old locus tag: TGRD_RS02110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHKVRKESIWVKMYVIVLFFCGVGIWFSIQLAHNRKIYTNATLNRKIESVLVKNGIAENDILSQYIRERNKKTAAWNEFYKIIKLKSGKTARTFEKSFRSVARSMKVGLSRADNADGSVTYKFYSSEKNYFNITFMSLKKSSKG
SIO_010081: H0I88_RS02155
subclass of: SO_0000673
so part of: H0I88_RS02155
location: 455371..455808
location: region:455371-455808:1
so has part: feature:455371-455808:1:exon

WP_095558738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455371-455808:1:exon

H0I88_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tsaD
locus tag: H0I88_RS02160
old locus tag: TGRD_301
old locus tag: TGRD_305
old locus tag: TGRD_RS02115
so part of: sequence
location: 455818..456846
location: region:455818-456846:1
so has part: feature:455818-456846:1:exon
subclass of: SO_0000010

position:455818:1
position: 455818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456846:1
position: 456846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455818-456846:1:exon

H0I88_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tsaD
locus tag: H0I88_RS02160
old locus tag: TGRD_301
old locus tag: TGRD_305
old locus tag: TGRD_RS02115
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03723.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MNIFAIETSCDETSASVVLNGLKVKSVVIYSQIKIHAGFFGVVPELASRSHIENINLVIWRALSDAGINFTDFSQKIDALAFTSGPGLAGALLVGAIAAKSLACVYKKPLIPVNHLDGHLYSSLIENRSVKLPFLSLIISGGHTELVVVEDFGKYKVLGSTRDDAAGEAFDKAAKMLGLSYPGGPIIDKIAESGNPEAVRFTRPYLKGSWDFSFSGIKTALLNYLKTNPVRNEKQLNDICASFRQAVAETLCFKSFEAAKKFNLKRIVLGGGVSANSLIRKIFLETGQKNNTKVFIPSLIYSTDNAAMIGCAAYFKQKKCGLKYDNIQLKPNPSLPLENWRL
SIO_010081: H0I88_RS02160
subclass of: SO_0000673
so part of: H0I88_RS02160
location: 455818..456846
location: region:455818-456846:1
so has part: feature:455818-456846:1:exon

WP_015423315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455818-456846:1:exon

H0I88_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dusB
locus tag: H0I88_RS02165
old locus tag: TGRD_302
old locus tag: TGRD_306
old locus tag: TGRD_RS02120
so part of: sequence
location: 456998..457960
location: region:456998-457960:1
so has part: feature:456998-457960:1:exon
subclass of: SO_0000010

position:456998:1
position: 456998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457960:1
position: 457960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456998-457960:1:exon

H0I88_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dusB
locus tag: H0I88_RS02165
old locus tag: TGRD_302
old locus tag: TGRD_306
old locus tag: TGRD_RS02120
EC number: 1.3.1.-
inference: COORDINATES: protein motif:HMM:TIGR00737.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine synthase DusB
translation: MKKLSLGNIEFDNNIILAPMAGITDLPLRRLAKSGGAGLVYTGMLSARALVRSDEKTEKLLKTTEDERPVAAQIFGSAAHIMAEAAKIVRNSGADIIDVNLGCPVKKVAKAGAGAKLLADEKLVSEILESVVKSVDVPVTVKIRTGLLPEHNAATEIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIPVIANGGVVDEKTAADFLRVPNCAGIMIGRGALGNYSIFKRLEAFFSSGKKLPLPSKTEKVEWLKKHVQYSVEYYGEKKGFVVMKKVFHYYVKDLPNAAKIRDIFNKKIVTLSDFNELIKLF
SIO_010081: H0I88_RS02165
subclass of: SO_0000673
so part of: H0I88_RS02165
location: 456998..457960
location: region:456998-457960:1
so has part: feature:456998-457960:1:exon

WP_015423316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456998-457960:1:exon

H0I88_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02170
old locus tag: TGRD_RS02125
so part of: sequence
location: 458288..458599
location: region:458288-458599:1
so has part: feature:458288-458599:1:exon
subclass of: SO_0000010

position:458288:1
position: 458288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458599:1
position: 458599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458288-458599:1:exon

H0I88_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02170
old locus tag: TGRD_RS02125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFLLLVLATTFIFTAGCKKQDIKHDNIDSTDSVETIVFTDEPSIRGNHFDRDINLKSIYFDFDKNDFRKDSMEILKENVDYLKSNPDIKVVLEGHTAMRDV
SIO_010081: H0I88_RS02170
subclass of: SO_0000673
so part of: H0I88_RS02170
location: 458288..458599
location: region:458288-458599:1
so has part: feature:458288-458599:1:exon

WP_095558739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458288-458599:1:exon

H0I88_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02175
old locus tag: TGRD_307
old locus tag: TGRD_pseudo_63
old locus tag: TGRD_RS02130
so part of: sequence
location: 458890..459495
location: region:458890-459495:1
so has part: feature:458890-459495:1:exon
subclass of: SO_0000010

position:458890:1
position: 458890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459495:1
position: 459495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458890-459495:1:exon

H0I88_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02175
old locus tag: TGRD_307
old locus tag: TGRD_pseudo_63
old locus tag: TGRD_RS02130
inference: COORDINATES: protein motif:HMM:NF024572.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKGELSRLQIQNKELRENQFDLYTKADSTYVMFDVLSASLQDLQNKISVLSQAIHDLKVVTDKRSKSNDQSVLPSFIYQNAYGDYLMAKFDLAYSGFQSFADKYPNAELVPQAQFYMGECFYSMSMWDKALEEYKKVEQRYKKRSDLVSSARLKIALCCQKLDKNEEAIRMFSSIIKDFPQSPESLTAKESIEIYNNAQKR
SIO_010081: H0I88_RS02175
subclass of: SO_0000673
so part of: H0I88_RS02175
location: 458890..459495
location: region:458890-459495:1
so has part: feature:458890-459495:1:exon

WP_015423317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458890-459495:1:exon

H0I88_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02180
old locus tag: TGRD_RS05900
so part of: sequence
location: 459780..459917
location: region:459780-459917:1
so has part: feature:459780-459917:1:exon
subclass of: SO_0000010

position:459780:1
position: 459780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459917:1
position: 459917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459780-459917:1:exon

H0I88_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02180
old locus tag: TGRD_RS05900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLTQKNQISSPQNLLEKKTEIAEFSGNSSDVETFQAPDSDKLLA
SIO_010081: H0I88_RS02180
subclass of: SO_0000673
so part of: H0I88_RS02180
location: 459780..459917
location: region:459780-459917:1
so has part: feature:459780-459917:1:exon

WP_158302786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459780-459917:1:exon

H0I88_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02185
old locus tag: TGRD_RS05680
so part of: sequence
location: 460280..460501
location: region:460280-460501:1
so has part: feature:460280-460501:1:exon
subclass of: SO_0000010

position:460280:1
position: 460280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460501:1
position: 460501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460280-460501:1:exon

H0I88_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02185
old locus tag: TGRD_RS05680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIYAQSNVCLSLSATGKRSDIAVEYFIAADKKDDSVKYAKLLKEIIENDLILSRHFNAIQNAFEDGEKTVFK
SIO_010081: H0I88_RS02185
subclass of: SO_0000673
so part of: H0I88_RS02185
location: 460280..460501
location: region:460280-460501:1
so has part: feature:460280-460501:1:exon

WP_145971071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460280-460501:1:exon

H0I88_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02190
old locus tag: TGRD_RS02135
so part of: sequence
location: 460470..461096
location: region:460470-461096:1
so has part: feature:460470-461096:1:exon
subclass of: SO_0000010

position:460470:1
position: 460470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461096:1
position: 461096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460470-461096:1:exon

H0I88_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02190
old locus tag: TGRD_RS02135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTVRRPFLSKSCFYGKKRGASVLLTGSVSINGDKLVLEIKMVDVISGETIWKCNYKNESLNYRYMAHEASDEIVRKFTGEMGIARSKIVFVNDSTRFKELYIIDYDGYNLHRLTKDNKINIIPKWSPDGEQIIYTSYLYNNPDLFVLDLVKNRRSIISKYQGLNTAGSFSLDGEKILLTLSRGRYPNLYLINTSGEILQWLTNSFVH
SIO_010081: H0I88_RS02190
subclass of: SO_0000673
so part of: H0I88_RS02190
location: 460470..461096
location: region:460470-461096:1
so has part: feature:460470-461096:1:exon

WP_232501238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460470-461096:1:exon

H0I88_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02195
old locus tag: TGRD_RS02140
so part of: sequence
location: 461173..461550
location: region:461173-461550:1
so has part: feature:461173-461550:1:exon
subclass of: SO_0000010

position:461173:1
position: 461173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461550:1
position: 461550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461173-461550:1:exon

H0I88_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02195
old locus tag: TGRD_RS02140
inference: COORDINATES: protein motif:HMM:NF013123.2
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DPP IV N-terminal domain-containing protein
translation: MNVNGGNIRRLTTSGFCGSPSWPPRGDKIVFTMRQPKGNYDLYVYDLPTAKITKLTNSQRNNENPTWSPDGRFVTFYSNRSGKVEIYVMAIDGSGTRKFAEILGMSDSPIMVSCFNKIKSFCVRG
SIO_010081: H0I88_RS02195
subclass of: SO_0000673
so part of: H0I88_RS02195
location: 461173..461550
location: region:461173-461550:1
so has part: feature:461173-461550:1:exon

WP_095558742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461173-461550:1:exon

H0I88_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02200
old locus tag: TGRD_303
old locus tag: TGRD_308
old locus tag: TGRD_RS02145
so part of: sequence
location: 462003..462965
location: region:462003-462965:1
so has part: feature:462003-462965:1:exon
subclass of: SO_0000010

position:462003:1
position: 462003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462965:1
position: 462965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462003-462965:1:exon

H0I88_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02200
old locus tag: TGRD_303
old locus tag: TGRD_308
old locus tag: TGRD_RS02145
EC number: 2.7.1.11
inference: COORDINATES: protein motif:HMM:NF002872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent 6-phosphofructokinase
translation: MAKRVGIITSGGDAPGMNAAIRAVARRGIFWGYQMIGIKRGFKGLLDYEFMTLTLRSVSGIINTGGTVLHTGRCPEMKTKIGMGRAVKAIKDLGLSAVIIIGGDGSLAAGNSLSKHGIKVINIAASIDNDIYGTDETIGYDTALNTAVEAIDKIRDTAKSHDRVFVVEIMGREHGFLTVDVGLAAGCEYIVVPEMKVDMQKLTAELKKGKERGKTSEIIAFAEGCGCSAEFAKKVEKLTGLDVRVSNLGYIQRGGRPTARTRILASKFGHAAMDLFHKGKANLFVGITNGNVSAVSICEAIKCEKKFDVKTAKIVKNLSV
SIO_010081: H0I88_RS02200
subclass of: SO_0000673
so part of: H0I88_RS02200
location: 462003..462965
location: region:462003-462965:1
so has part: feature:462003-462965:1:exon

WP_015423318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462003-462965:1:exon

H0I88_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tyrS
locus tag: H0I88_RS02205
old locus tag: TGRD_304
old locus tag: TGRD_309
old locus tag: TGRD_RS02150
so part of: sequence
location: 463035..464201
location: region:463035-464201:1
so has part: feature:463035-464201:1:exon
subclass of: SO_0000010

position:463035:1
position: 463035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464201:1
position: 464201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463035-464201:1:exon

H0I88_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tyrS
locus tag: H0I88_RS02205
old locus tag: TGRD_304
old locus tag: TGRD_309
old locus tag: TGRD_RS02150
EC number: 6.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00234.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MNEALEKIKRGTNEIISFEELKKKLASGKKLRIKLGIDPTTSDLHLGHTVIINKLKTFQDLGHQIVFLIGDFTARIGDPSGRSEMRPVMTDEQIKNNARTYADQIFKILNRDKTEIVYNSKWLSELGVKGLLNLAAKSTVAQMLVRDDFKKRYKEDSPLSIVEFLYPLLQAYDSVVLNADVELGGSDQKFNLLLGREIQRDYGIKDVQVVITMPLLEGTDGTKKMSKSYKNCIALNDSPEDMFGKIMSISDELMCRYHELLTQIDLNVVKNMHPKEAKSALAKELVERYYGKEEALKAEEEFDKIFSKKNIPNDIGEYRIKDEEIKLSDLLVKSGMISSRNEARRIIEQGGVRIDSRKTVRDFVVKSGNTFVLQVGKRKFNRIIREEN
SIO_010081: H0I88_RS02205
subclass of: SO_0000673
so part of: H0I88_RS02205
location: 463035..464201
location: region:463035-464201:1
so has part: feature:463035-464201:1:exon

WP_015423319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463035-464201:1:exon

H0I88_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02210
old locus tag: TGRD_305
old locus tag: TGRD_310
old locus tag: TGRD_RS02155
so part of: sequence
location: 464365..465210
location: region:464365-465210:1
so has part: feature:464365-465210:1:exon
subclass of: SO_0000010

position:464365:1
position: 464365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465210:1
position: 465210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464365-465210:1:exon

H0I88_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02210
old locus tag: TGRD_305
old locus tag: TGRD_310
old locus tag: TGRD_RS02155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002415046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
translation: MYKIISKKEIGPKVRTYEICAPEIARNAKAGQFVIFRIDDKGERVPLTVAGTDPQKGLVRIIFQEVGKSTMQLASLCEGDCIKDFAGPLGRPTEIKKYGTVVAVAGGVGTAEVLPVIKELKQAGNRIITVVGARCKDLIILEDELKRESDLLLFATNDGTLGIKGFVTAVLKDVISREKIDIAYAIGPVPMMKAVAELTMLKRIKTLVSLSPIMLDGTGMCGACRVSIGGKMKFVCVDGPEFDAHYVNWEELASRLELFKNLEKISVDKFKYSQECKCHKK
SIO_010081: H0I88_RS02210
subclass of: SO_0000673
so part of: H0I88_RS02210
location: 464365..465210
location: region:464365-465210:1
so has part: feature:464365-465210:1:exon

WP_015423320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464365-465210:1:exon

H0I88_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gltA
locus tag: H0I88_RS02215
old locus tag: TGRD_306
old locus tag: TGRD_311
old locus tag: TGRD_RS02160
so part of: sequence
location: 465195..466565
location: region:465195-466565:1
so has part: feature:465195-466565:1:exon
subclass of: SO_0000010

position:465195:1
position: 465195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466565:1
position: 466565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465195-466565:1:exon

H0I88_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gltA
locus tag: H0I88_RS02215
old locus tag: TGRD_306
old locus tag: TGRD_311
old locus tag: TGRD_RS02160
EC number: 1.4.1.13
inference: COORDINATES: protein motif:HMM:TIGR01316.1
GO function: GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADPH-dependent glutamate synthase
translation: MSQKVKMPERDPKIRKKDFKQVNTGYTRDEMLKEAKRCLQCKNPSCSRGCPVEVNIPGFIKYLAGDNPSQAVKVLKQKNNLPAVCGRVCPQENQCERLCILGKKGESICIGNLERYATDIAFENNDSIAVAEKSGVKVAVVGSGPAGLTCGGDLLKMGYDVTVYESLHSAGGVLRYGIPEFRLPKEVLDKEINNLKKLGMKIILNTLIGRTRTVKELFNESYKAIFISVGAGLPVFPGIEGENLNHVYCSNEFLVRVNLMRSFDFPNYDTPVYRGKNVVVIGGGNTAMDSARTALRLGAESVKLIYRRTEKEMPAREEERLHARKEGIEFIVLTNPVKFIGDEKKFVKAVECIKMELGDYDDSGRRHPQEIKESNYAIETDMVILALGLHPNPVLTLLTEGLNTDRHGYIIIDDNYMTSVPGVFAGGDIVGGDTVIEAMGMGKKAARSIACYLNQK
SIO_010081: H0I88_RS02215
subclass of: SO_0000673
so part of: H0I88_RS02215
location: 465195..466565
location: region:465195-466565:1
so has part: feature:465195-466565:1:exon

WP_015423321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465195-466565:1:exon

H0I88_RS06200
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06200
pseudo: true
so part of: sequence
location: 467225..467560
location: region:467225-467560:1
so has part: feature:467225-467560:1:exon
subclass of: SO_0000010

position:467225:1
position: 467225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467560:1
position: 467560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467225-467560:1:exon

H0I88_RS06200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06200
inference: COORDINATES: protein motif:HMM:NF037048.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: H0I88_RS06200
subclass of: SO_0000673
so part of: H0I88_RS06200
location: 467225..467560
location: region:467225-467560:1
so has part: feature:467225-467560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467225-467560:1:exon

H0I88_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tpiA
locus tag: H0I88_RS02230
old locus tag: TGRD_307
old locus tag: TGRD_312
old locus tag: TGRD_RS02170
so part of: sequence
location: 468983..469720
location: region:468983-469720:1
so has part: feature:468983-469720:1:exon
subclass of: SO_0000010

position:468983:1
position: 468983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469720:1
position: 469720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468983-469720:1:exon

H0I88_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tpiA
locus tag: H0I88_RS02230
old locus tag: TGRD_307
old locus tag: TGRD_312
old locus tag: TGRD_RS02170
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003498915.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MAGNWKMNKTVSEAVSFVKALKGAVTGVSNVEILVCPAFTVLYEVNNEIKGSNINLGAQNLFGEAKGAFTGEISTAMIRDTGCSYVIVGHSERRQYFGETDEAVNKKTKAALAADITPIVCVGETLKERENNVTFSVIEKQVRNGLADLTLQQASLTVIAYEPVWAIGTGKTATPDQAQEVHSFIRKIYAQMYEESAEKVRILYGGSVNPGNVSDLMKKSDIDGGLVGGASLEAESFTKLVKYSK
SIO_010081: H0I88_RS02230
subclass of: SO_0000673
so part of: H0I88_RS02230
location: 468983..469720
location: region:468983-469720:1
so has part: feature:468983-469720:1:exon

WP_232501239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468983-469720:1:exon

H0I88_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpiB
locus tag: H0I88_RS02235
old locus tag: TGRD_308
old locus tag: TGRD_313
old locus tag: TGRD_RS02175
so part of: sequence
location: 470085..470546
location: region:470085-470546:1
so has part: feature:470085-470546:1:exon
subclass of: SO_0000010

position:470085:1
position: 470085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470546:1
position: 470546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470085-470546:1:exon

H0I88_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpiB
locus tag: H0I88_RS02235
old locus tag: TGRD_308
old locus tag: TGRD_313
old locus tag: TGRD_RS02175
EC number: 5.3.1.6
inference: COORDINATES: protein motif:HMM:NF004051.0
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose 5-phosphate isomerase B
translation: MDKIMKLAFGTDHAAAEVRNKVKEYFQSAGYEIEDFGFCGDGSCDYPDYAVKVAEAVISKKADRGILICGTGIGMSIAANKMKGIIAAVCWNEDTAKLAVRHNGANVLCLGSRTATLSELCQRIKIFLGTPFEERHLQRIRKIEEIEKQQCQK
SIO_010081: H0I88_RS02235
subclass of: SO_0000673
so part of: H0I88_RS02235
location: 470085..470546
location: region:470085-470546:1
so has part: feature:470085-470546:1:exon

WP_197702025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470085-470546:1:exon

H0I88_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02240
old locus tag: TGRD_RS05910
so part of: sequence
location: 470874..471020
location: region:470874-471020:1
so has part: feature:470874-471020:1:exon
subclass of: SO_0000010

position:470874:1
position: 470874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471020:1
position: 471020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470874-471020:1:exon

H0I88_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02240
old locus tag: TGRD_RS05910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVKFYIWNLCVPAVGLWAGDSSPMICFVLNRAVGIVLKTLPHGYRVK
SIO_010081: H0I88_RS02240
subclass of: SO_0000673
so part of: H0I88_RS02240
location: 470874..471020
location: region:470874-471020:1
so has part: feature:470874-471020:1:exon

WP_158302789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470874-471020:1:exon

H0I88_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02245
old locus tag: TGRD_309
old locus tag: TGRD_314
old locus tag: TGRD_RS02180
so part of: sequence
location: 471056..471880
location: region:471056-471880:1
so has part: feature:471056-471880:1:exon
subclass of: SO_0000010

position:471056:1
position: 471056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471880:1
position: 471880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471056-471880:1:exon

H0I88_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02245
old locus tag: TGRD_309
old locus tag: TGRD_314
old locus tag: TGRD_RS02180
inference: COORDINATES: protein motif:HMM:NF012670.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: METSDLKIISADVRKDIIKMLSLAGTGHPGGSLSSVELLVSLYFKHMKFNPKDANDQSRDYFILSKGHVCPVLYAVLARLGYFNPDELCTLRKTGSRLQGHPAKDKELPGIEISTGSLGYGLSIGAGIAAGMKQSKKNNRIYVLMGDGEQQEGSIWEAAMSAAHFKFDNLCAIVDDNGLQIDGATKDVMNVNPLADKYRAFGWNVIEIDGHNLEAVDKAYLQFKTEEGRPTAIIAKTVKGKGVSYMENLVEWHGKIPSKELVEKALAEIDRSLR
SIO_010081: H0I88_RS02245
subclass of: SO_0000673
so part of: H0I88_RS02245
location: 471056..471880
location: region:471056-471880:1
so has part: feature:471056-471880:1:exon

WP_015423324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471056-471880:1:exon

H0I88_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02250
old locus tag: TGRD_310
old locus tag: TGRD_315
old locus tag: TGRD_RS02185
so part of: sequence
location: 472000..472947
location: region:472000-472947:1
so has part: feature:472000-472947:1:exon
subclass of: SO_0000010

position:472000:1
position: 472000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472947:1
position: 472947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472000-472947:1:exon

H0I88_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02250
old locus tag: TGRD_310
old locus tag: TGRD_315
old locus tag: TGRD_RS02185
inference: COORDINATES: protein motif:HMM:NF014798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase family protein
translation: MVEVFGKRATRFGFGEGIIELGKENPKIFVLGADTISSVLIDGFKKIFPDRFINVGIAETNLIGMAAGLAVAGFIPFVSTYGVFASGRPWEHIRTTVCYSNLNVKIGGSHSGIMVGPDGATHQALEDIAIMRCLPRMKVIVPCDLVETKKAVVASAYSDGPVYIRYGRENIPVFTKDDAPFEIGKANILRDGNDVAIVSCGTMVYESLMSAEILEKKGIKARVINIHTIKPIDEKAIINAAKKCGAVVTAEEHQVYGGFGSAVAEVLVKNYPVPVEMVGVADRFGESGEPMNLMSRFGLRDVNIADAVLKVLKRK
SIO_010081: H0I88_RS02250
subclass of: SO_0000673
so part of: H0I88_RS02250
location: 472000..472947
location: region:472000-472947:1
so has part: feature:472000-472947:1:exon

WP_015423325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472000-472947:1:exon

H0I88_RS05925
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05925
so part of: sequence
location: 472949..473278
location: region:472949-473278:1
so has part: feature:472949-473278:1:exon
subclass of: SO_0000010

position:472949:1
position: 472949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473278:1
position: 473278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472949-473278:1:exon

H0I88_RS05925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTERIVLIVLDSVGVGELSDAVSYNDAGTDTIGHIFDRYEKSFSLPNMAKLGLYKLLNRRNSLPCVDVTGCYGKMMTKSPAKDTMAGHWEMSGIILPPPFLSCVSERVS
SIO_010081: H0I88_RS05925
subclass of: SO_0000673
so part of: H0I88_RS05925
location: 472949..473278
location: region:472949-473278:1
so has part: feature:472949-473278:1:exon

WP_198407717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472949-473278:1:exon

H0I88_RS05930
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05930
so part of: sequence
location: 473485..473862
location: region:473485-473862:1
so has part: feature:473485-473862:1:exon
subclass of: SO_0000010

position:473485:1
position: 473485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473862:1
position: 473862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473485-473862:1:exon

H0I88_RS05930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYEIFCAEGDAVGRVTARPFIGTDGSYRRTVNMRDYSFTPVESTVLDKIKNSGGSVIAIGKIEDIFNAKGITEAVHTEGNLNCMKITLDKVKHPFEKQTLIFNNLVDFDMLWGHRRDSFNLCGRT
SIO_010081: H0I88_RS05930
subclass of: SO_0000673
so part of: H0I88_RS05930
location: 473485..473862
location: region:473485-473862:1
so has part: feature:473485-473862:1:exon

WP_198407718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473485-473862:1:exon

H0I88_RS05935
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05935
so part of: sequence
location: 473879..474016
location: region:473879-474016:1
so has part: feature:473879-474016:1:exon
subclass of: SO_0000010

position:473879:1
position: 473879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474016:1
position: 474016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473879-474016:1:exon

H0I88_RS05935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05935
inference: COORDINATES: protein motif:HMM:NF013811.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVLIEELKDDDILIITADHGCDPTYELHTDHTREYVPLLLRGKN
SIO_010081: H0I88_RS05935
subclass of: SO_0000673
so part of: H0I88_RS05935
location: 473879..474016
location: region:473879-474016:1
so has part: feature:473879-474016:1:exon

WP_232501240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473879-474016:1:exon

H0I88_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02260
old locus tag: TGRD_311
old locus tag: TGRD_316
old locus tag: TGRD_RS02195
so part of: sequence
location: 474186..475031
location: region:474186-475031:1
so has part: feature:474186-475031:1:exon
subclass of: SO_0000010

position:474186:1
position: 474186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475031:1
position: 475031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474186-475031:1:exon

H0I88_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02260
old locus tag: TGRD_311
old locus tag: TGRD_316
old locus tag: TGRD_RS02195
EC number: 2.4.2.1
inference: COORDINATES: protein motif:HMM:NF006054.0
GO function: GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: purine-nucleoside phosphorylase
translation: MKLNIFKKIQETKKTILSLHDFNPTTAVIAGSGLGEISKQFTIRKTIKYSDIPYFLKTAVQGHAGDLLLCSYGSADLLIFNGRFHYYEGHHPQEVVYPVRVMKFLGIKTLVITAATGGLNKKYSVGDIIVLKDHIDCTGNNPLIGVHYDEFGERFPNMENVYDAVLRKKALSLAKKFKIKACEGIYFGVSGPSYETPASVKAYQILGGDVVGMSVVYEATVAAQMKMRVLGLAYVSNMAAGIHNRPLSHAEVIENGEKVSLSMSKIAKNIISFTDNQVKLL
SIO_010081: H0I88_RS02260
subclass of: SO_0000673
so part of: H0I88_RS02260
location: 474186..475031
location: region:474186-475031:1
so has part: feature:474186-475031:1:exon

WP_015423326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474186-475031:1:exon

H0I88_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: mtnP
locus tag: H0I88_RS02265
old locus tag: TGRD_312
old locus tag: TGRD_317
old locus tag: TGRD_RS02200
so part of: sequence
location: 475249..476124
location: region:475249-476124:1
so has part: feature:475249-476124:1:exon
subclass of: SO_0000010

position:475249:1
position: 475249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476124:1
position: 476124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475249-476124:1:exon

H0I88_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: mtnP
locus tag: H0I88_RS02265
old locus tag: TGRD_312
old locus tag: TGRD_317
old locus tag: TGRD_RS02200
EC number: 2.4.2.28
inference: COORDINATES: protein motif:HMM:NF013232.2
GO function: GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO process: GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-methyl-5'-thioadenosine phosphorylase
translation: MSDNPIKIAFIGGSGLYQIDGIENIVEKDIDTPFGRPSDKIITGVINRINCAFLPRHGRGHILNPSEINQRANIYALKSLGTEQIVSFTACGSLKEEIKPKDFVIPDQVFDRTKNRSLTFFEKGIVAHVSMAYPFCNEIRSLIRQTVYEIGIKYHFCGTYVCIEGPQFSTKAESQINRQSGFSVVGMTLFPEAKLAREAEICYANISLVTDFDVWKEREEVTNDAVVANVAANVANSRRVIKSLILKLSRREIKCSCGSSLKKSLMTSSDRVTVSPHYKNVSLLIDKYFKK
SIO_010081: H0I88_RS02265
subclass of: SO_0000673
so part of: H0I88_RS02265
location: 475249..476124
location: region:475249-476124:1
so has part: feature:475249-476124:1:exon

WP_095558981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475249-476124:1:exon

H0I88_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02270
old locus tag: TGRD_313
old locus tag: TGRD_318
old locus tag: TGRD_RS02205
so part of: sequence
location: complement(476264..476770)
location: region:476264-476770:-1
so has part: feature:476264-476770:-1:exon
subclass of: SO_0000010

position:476264:-1
position: 476264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476770:-1
position: 476770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476264-476770:-1:exon

H0I88_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02270
old locus tag: TGRD_313
old locus tag: TGRD_318
old locus tag: TGRD_RS02205
inference: COORDINATES: protein motif:HMM:NF014068.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DJ-1/PfpI family protein
translation: MNRVVFITAPEIFRDEEYYKPKKVLEDTGIEVITASVKTGELRGRFGFKTTSMLLIQEINPNDFDAIVYIGGNGSVIFFDNHYALKLANDFFKQRKPVSSICIAGVILANAGILKGKKATVFIDGKEALIKGGAIYTGNPLEIDGNIITAKGPDVAEDFGKAILKSLE
SIO_010081: H0I88_RS02270
subclass of: SO_0000673
so part of: H0I88_RS02270
location: complement(476264..476770)
location: region:476264-476770:-1
so has part: feature:476264-476770:-1:exon

WP_015423328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476264-476770:-1:exon

H0I88_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02275
old locus tag: TGRD_314
old locus tag: TGRD_319
old locus tag: TGRD_RS02210
so part of: sequence
location: complement(477253..478455)
location: region:477253-478455:-1
so has part: feature:477253-478455:-1:exon
subclass of: SO_0000010

position:477253:-1
position: 477253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478455:-1
position: 478455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477253-478455:-1:exon

H0I88_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02275
old locus tag: TGRD_314
old locus tag: TGRD_319
old locus tag: TGRD_RS02210
EC number: 2.7.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate kinase
translation: MKVLVVNCGSSSVKYTLFEMENEKKIAWGIVECGPSKSYYKRQTAVSEEKKNSVKVTSHTEAVELIINDLLDKEIGSIVNIDEIDVIGHRIVHGGDRFSRSVLVTKEVKKGLKECFSIAPLHTPAHYAGILAVEKMLPGIPSVLVFDTAFHQTMPDYAYMYALPFEYYEKYHIRKYGFHGTSHNYVSQRAAIMLGKSLNELKLITAHLGNGSSITAIEKGKVIDTSMGFTPLQGVVMGTRCGDIDPAIIAYIIKIHPKYRNSEALNALMNKESGLLGISGISGDMRSIVKAATESNKKAKLAFETLCYSIKKYISSYYGILNGIDGLVFTAGIGENSPVVREKICVNLHAIGIEIDTEKNNEPSSKERFVSTAYSRVKIMIIPTNEELMIARESRDCLRT
SIO_010081: H0I88_RS02275
subclass of: SO_0000673
so part of: H0I88_RS02275
location: complement(477253..478455)
location: region:477253-478455:-1
so has part: feature:477253-478455:-1:exon

WP_015423329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477253-478455:-1:exon

H0I88_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02280
old locus tag: TGRD_315
old locus tag: TGRD_RS02215
so part of: sequence
location: 479725..479955
location: region:479725-479955:1
so has part: feature:479725-479955:1:exon
subclass of: SO_0000010

position:479725:1
position: 479725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479955:1
position: 479955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479725-479955:1:exon

H0I88_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02280
old locus tag: TGRD_315
old locus tag: TGRD_RS02215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNIEILAVKVKKATERLKRLTDENLKLKLEVEYLRKESACGRKQTSEYVVLRKNTEEAAAKIERIIKKIDTAKVS
SIO_010081: H0I88_RS02280
subclass of: SO_0000673
so part of: H0I88_RS02280
location: 479725..479955
location: region:479725-479955:1
so has part: feature:479725-479955:1:exon

WP_095558746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479725-479955:1:exon

H0I88_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02285
old locus tag: TGRD_316
old locus tag: TGRD_RS02220
so part of: sequence
location: 479958..480248
location: region:479958-480248:1
so has part: feature:479958-480248:1:exon
subclass of: SO_0000010

position:479958:1
position: 479958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480248:1
position: 480248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479958-480248:1:exon

H0I88_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02285
old locus tag: TGRD_316
old locus tag: TGRD_RS02220
inference: COORDINATES: protein motif:HMM:NF017016.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapA
translation: MAVTRERIMGREIDLNIDNIDELSFNKAVNFVNEQWLEIKRENANVADTQKIAALTAVKIAAELLKLKYLHESISNSYENKIKEFIRQLDEANHIN
SIO_010081: H0I88_RS02285
subclass of: SO_0000673
so part of: H0I88_RS02285
location: 479958..480248
location: region:479958-480248:1
so has part: feature:479958-480248:1:exon

WP_095558747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479958-480248:1:exon

H0I88_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02290
old locus tag: TGRD_317
old locus tag: TGRD_320
old locus tag: TGRD_RS02225
so part of: sequence
location: 480376..481695
location: region:480376-481695:1
so has part: feature:480376-481695:1:exon
subclass of: SO_0000010

position:480376:1
position: 480376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481695:1
position: 481695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480376-481695:1:exon

H0I88_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02290
old locus tag: TGRD_317
old locus tag: TGRD_320
old locus tag: TGRD_RS02225
inference: COORDINATES: protein motif:HMM:NF023428.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-associated recombination protein A
translation: MKQTNFLENAANRKNKPLAARMAPSSFEEFTGQDNIVGDGKLLRRSIEADNLGSVIFFGPPGTGKSALARIIALKTKAYFEEVNAVTTSTADIRKIIAAAEARTEMSGRKTILMLDEIHHFNRSQQDALLLDVEKGIITLIGITTENPFFYINAAIISRSTVFEFQSLSKKALLYVMESALKDKENGLGSYKVKMSEEAREHLLVNACGDARKLLNALEIGVLSAEVDGEGIRIFDIRAAQESMQKRAVLYDRSGDAHYDHISAFIKSMRGTDPDAAVYWMAKMLAAGEDPRFIARRIIICASEDVGMADPGALTLAVSALNAVQFVGMPEARIILAQVAIYVACAPKSNASYMAVEQALSEVKDGKARNVPSHLKDANLDSEKLGHGRGYKYPHDFEGHYTQQEYWTDPVEFYVPTKEGCEEKIRERLLGIRKKKNKA
SIO_010081: H0I88_RS02290
subclass of: SO_0000673
so part of: H0I88_RS02290
location: 480376..481695
location: region:480376-481695:1
so has part: feature:480376-481695:1:exon

WP_015423330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480376-481695:1:exon

H0I88_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02295
old locus tag: TGRD_318
old locus tag: TGRD_321
old locus tag: TGRD_RS02230
so part of: sequence
location: 481652..482251
location: region:481652-482251:1
so has part: feature:481652-482251:1:exon
subclass of: SO_0000010

position:481652:1
position: 481652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482251:1
position: 482251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481652-482251:1:exon

H0I88_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02295
old locus tag: TGRD_318
old locus tag: TGRD_321
old locus tag: TGRD_RS02230
EC number: 6.3.3.2
inference: COORDINATES: protein motif:HMM:TIGR02727.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MSGYLESEKRKIRHEFLALRNRMDADSAAVCSAGIFAGIKKLSAYEKAKTVMFYLSYDSEVVTDFMINSAFGSGKIVVIPLIKNFIDEEMYAVKISRLEDACLSVYGIRQPDINSVNINIVEKDNIDLVFVPGLAFDIKGHRTGYGKGCYDRWLKSVPFEKIVGLAYDFQVTKQLPIGEYDIPVSIIVTEKRVIQIKEN
SIO_010081: H0I88_RS02295
subclass of: SO_0000673
so part of: H0I88_RS02295
location: 481652..482251
location: region:481652-482251:1
so has part: feature:481652-482251:1:exon

WP_015423331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481652-482251:1:exon

H0I88_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rny
locus tag: H0I88_RS02300
old locus tag: TGRD_319
old locus tag: TGRD_322
old locus tag: TGRD_RS02235
so part of: sequence
location: 482263..483819
location: region:482263-483819:1
so has part: feature:482263-483819:1:exon
subclass of: SO_0000010

position:482263:1
position: 482263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483819:1
position: 483819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482263-483819:1:exon

H0I88_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rny
locus tag: H0I88_RS02300
old locus tag: TGRD_319
old locus tag: TGRD_322
old locus tag: TGRD_RS02235
inference: COORDINATES: protein motif:HMM:TIGR03319.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease Y
translation: MGNITVIVITAFVASIVGYILRLIYAKLNIRSVEQTSKRVIEEMKLIAETKAKEIILDARLIVDRERKEFEHKIKERRQFIQNMENKLNQREESLDRKMDAVDKKEKNLSEREKDFSSKEHLLSVKFSEVDKVKEEQKKFLERISGMTREEAKKILISGMEEDAKQCAAVLLQKLEQEMRENADKKSKEILSIAIQRVAADHTADITTSTIQISNDEIKGRIIGREGRNIKAFEHATGVDLIVDDTPESITISAFDGIRRQIAKIALERLIADGRIHPARIEEVVKKVKKDMEQHLKETGEQAVIEAGVPCSNLEIIKLLGKLKYRTSYGQSQLQHTLEVTWLAGAIAGELGLDVMFCKKAALLHDIGKAVDHEVEGTHHQISANIAKKYGESHKMINAILSHHEGFEVPSSPEAFVIATADAISAARPGARKESVERYLKRLEKLEKVVKEFRGVSIAYAMQAGREVRILVEPEKINDNQTQILAHDIAKKIEQELEYPGQIKITVVRETRVQEIAK
SIO_010081: H0I88_RS02300
subclass of: SO_0000673
so part of: H0I88_RS02300
location: 482263..483819
location: region:482263-483819:1
so has part: feature:482263-483819:1:exon

WP_015423332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482263-483819:1:exon

H0I88_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: xseA
locus tag: H0I88_RS02305
old locus tag: TGRD_320
old locus tag: TGRD_323
old locus tag: TGRD_RS02240
so part of: sequence
location: 484326..485564
location: region:484326-485564:1
so has part: feature:484326-485564:1:exon
subclass of: SO_0000010

position:484326:1
position: 484326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485564:1
position: 485564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484326-485564:1:exon

H0I88_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: xseA
locus tag: H0I88_RS02305
old locus tag: TGRD_320
old locus tag: TGRD_323
old locus tag: TGRD_RS02240
EC number: 3.1.11.6
inference: COORDINATES: protein motif:HMM:TIGR00237.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII large subunit
translation: MSEDLEFNCGGNSGDGRLIYTVTQISDEIKLILEDSYPTVWIRGEISNFKLYNFGHIYFNIRDKNAQIRAVVFRNTGISLSFSPEDGMKVLVYGRVSSYPKRGDYQVIVNRIERYGRGELYEAYEKLKEKLKAEGFFDESAKKPIPDIVSRIGIVTSQDGAALRDILKVIDSLNANVEILIYPVRVQGKEAEKEIPQAIEYLNSRHKDLDVLLVGRGGGAVEDLWAFNTESVARAIFASEIPVVSCVGHEVDFTIADFVADMRAPTPSAAAEMVLRSRNYIKTRIELLGESLSRAINFILGDRSAELDRLISSRALTKPRLIYEYKISYLDGLGSRLLKSIGRLFESKSENLENVSRRLDIVSPLSVLKRGFSICFDSNNEIIKDSKNVNVGDDISIKFASCSLNAQVKSYE
SIO_010081: H0I88_RS02305
subclass of: SO_0000673
so part of: H0I88_RS02305
location: 484326..485564
location: region:484326-485564:1
so has part: feature:484326-485564:1:exon

WP_015423333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484326-485564:1:exon

H0I88_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: xseB
locus tag: H0I88_RS02310
old locus tag: TGRD_321
old locus tag: TGRD_324
old locus tag: TGRD_RS02245
so part of: sequence
location: 485557..485772
location: region:485557-485772:1
so has part: feature:485557-485772:1:exon
subclass of: SO_0000010

position:485557:1
position: 485557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485772:1
position: 485772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485557-485772:1:exon

H0I88_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: xseB
locus tag: H0I88_RS02310
old locus tag: TGRD_321
old locus tag: TGRD_324
old locus tag: TGRD_RS02245
EC number: 3.1.11.6
inference: COORDINATES: protein motif:HMM:TIGR01280.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII small subunit
translation: MNKKQLNFEKSLKKLEEIVSEIENADPDLDKALALFAEGAELIKSCLAKLNETKKKIEVIISSGKTEFFKE
SIO_010081: H0I88_RS02310
subclass of: SO_0000673
so part of: H0I88_RS02310
location: 485557..485772
location: region:485557-485772:1
so has part: feature:485557-485772:1:exon

WP_015423334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485557-485772:1:exon

H0I88_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02315
old locus tag: TGRD_322
old locus tag: TGRD_325
old locus tag: TGRD_RS02250
so part of: sequence
location: 485784..486677
location: region:485784-486677:1
so has part: feature:485784-486677:1:exon
subclass of: SO_0000010

position:485784:1
position: 485784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486677:1
position: 486677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485784-486677:1:exon

H0I88_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02315
old locus tag: TGRD_322
old locus tag: TGRD_325
old locus tag: TGRD_RS02250
inference: COORDINATES: protein motif:HMM:NF012568.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MKNIDFKKYILQKVEYINLVLKKFLPKDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFGVKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCGDALLTESFSLITKSKSSEKNINEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKILLGEKIKFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADKKLLGKEGSDAENGKLTVLSLCGKREAEKKAYEHIKKAKKAVSVFGNKSEIFVYLLDYIADRTY
SIO_010081: H0I88_RS02315
subclass of: SO_0000673
so part of: H0I88_RS02315
location: 485784..486677
location: region:485784-486677:1
so has part: feature:485784-486677:1:exon

WP_015423335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485784-486677:1:exon

H0I88_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dxs
locus tag: H0I88_RS02320
old locus tag: TGRD_323
old locus tag: TGRD_326
old locus tag: TGRD_RS02255
so part of: sequence
location: 487122..488966
location: region:487122-488966:1
so has part: feature:487122-488966:1:exon
subclass of: SO_0000010

position:487122:1
position: 487122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488966:1
position: 488966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487122-488966:1:exon

H0I88_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dxs
locus tag: H0I88_RS02320
old locus tag: TGRD_323
old locus tag: TGRD_326
old locus tag: TGRD_RS02255
EC number: 2.2.1.7
inference: COORDINATES: protein motif:HMM:NF003933.0
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO process: GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-deoxy-D-xylulose-5-phosphate synthase
translation: MKVLDSINNPQDLKKLKKENLIDLAKEIREEIINTVSKNGGHLASSLGVVDLSIAIHYVFDSPHDKIIWDVGHQSYAHKILTGRKSKFKTIRTHSGLSGFPKRSESEYDAFSVGHSSTSISAALGFAAARDLKNEDYKIVAVIGDGSMTCGLAFEGLQNAGHLKKNMLVILNDNEMFISQKVGAVAGYLAKLLTAGMARKFEEKVMKTVSRFHGFGSPVGKFIKRVKVMLFPGMFFEEMGFTYIGPVQGHNINNLIVILENLKDVKTPVLLHVITKKGKGYAPAEEDPVKFHSVGKFDIKSGRIAKGEAITYTKVFSDTLIELAQSDDKIVAVTAAMPEGTGLDKFSEKFPDRYFDVGIAEGHAVTFAAAMAAGGMHPVCAIYSTFMQRAIDNIIHDVALQNLPVVFAVDRAGLVGEDGGTHHGAFDLSYLNYIPNLVVMSPSDENELRNMLKTALNSNTPCVIRYPKGTGIGAALYKLPCCILQIGKATVLRQGRDICFLAVGNHVETCLKASDLLLERNVNASVVNMRFLKPLDINTLKEMLLKTRKFITVEENALTGGFGETVKAFLCSSGAVVECIGLPDKFIEHGSLRFLREKYGFTPESIVEKALQML
SIO_010081: H0I88_RS02320
subclass of: SO_0000673
so part of: H0I88_RS02320
location: 487122..488966
location: region:487122-488966:1
so has part: feature:487122-488966:1:exon

WP_015423336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487122-488966:1:exon

H0I88_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02325
old locus tag: TGRD_RS02260
so part of: sequence
location: 489018..489257
location: region:489018-489257:1
so has part: feature:489018-489257:1:exon
subclass of: SO_0000010

position:489018:1
position: 489018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489257:1
position: 489257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489018-489257:1:exon

H0I88_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02325
old locus tag: TGRD_RS02260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILRIICCVLIFSLIFSGCGKHPPYQIIRGNHKVVVARENKKEEPEIKNKIIYVGKEPRGFLDVIFEDIFAQVFIAPGA
SIO_010081: H0I88_RS02325
subclass of: SO_0000673
so part of: H0I88_RS02325
location: 489018..489257
location: region:489018-489257:1
so has part: feature:489018-489257:1:exon

WP_095558749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489018-489257:1:exon

H0I88_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02330
old locus tag: TGRD_RS05915
so part of: sequence
location: 489499..489666
location: region:489499-489666:1
so has part: feature:489499-489666:1:exon
subclass of: SO_0000010

position:489499:1
position: 489499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489666:1
position: 489666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489499-489666:1:exon

H0I88_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02330
old locus tag: TGRD_RS05915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKTIPNANRQMPIGQLSMGGQMRHPMRQSPIQPNVVPPQGKSCRRRNRHRNNVR
SIO_010081: H0I88_RS02330
subclass of: SO_0000673
so part of: H0I88_RS02330
location: 489499..489666
location: region:489499-489666:1
so has part: feature:489499-489666:1:exon

WP_158302790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489499-489666:1:exon

H0I88_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02335
old locus tag: TGRD_324
old locus tag: TGRD_327
old locus tag: TGRD_RS02265
so part of: sequence
location: 489760..490512
location: region:489760-490512:1
so has part: feature:489760-490512:1:exon
subclass of: SO_0000010

position:489760:1
position: 489760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490512:1
position: 490512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489760-490512:1:exon

H0I88_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02335
old locus tag: TGRD_324
old locus tag: TGRD_327
old locus tag: TGRD_RS02265
inference: COORDINATES: protein motif:HMM:TIGR00478.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlyA family RNA methyltransferase
translation: MKKKKNKKRLDVLLFEKGFAETRTKAQAFIMSGNIFVNNQIQYRPGTLVGKEDSIEVRNANPYVSRGGLKLESVLETLAIDLEGYICLDIGASTGGFTDCMLQKGAIKVYAVDVGAGQLHYRLRQDKRVVNIENVNFRYFDNSFLKDNIDFTTIDVSFISLDKILPVAYRSISKNGFVLAMIKPQFELEASEIKKGVVRDKKLRQKAINKIKKVALDLGFKIISEADSCLKGLRGNLEHFIFLSKKHIFF
SIO_010081: H0I88_RS02335
subclass of: SO_0000673
so part of: H0I88_RS02335
location: 489760..490512
location: region:489760-490512:1
so has part: feature:489760-490512:1:exon

WP_015423337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489760-490512:1:exon

H0I88_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: leuS
locus tag: H0I88_RS02340
old locus tag: TGRD_325
old locus tag: TGRD_328
old locus tag: TGRD_RS02270
so part of: sequence
location: 490850..493306
location: region:490850-493306:1
so has part: feature:490850-493306:1:exon
subclass of: SO_0000010

position:490850:1
position: 490850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493306:1
position: 493306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490850-493306:1:exon

H0I88_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: leuS
locus tag: H0I88_RS02340
old locus tag: TGRD_325
old locus tag: TGRD_328
old locus tag: TGRD_RS02270
EC number: 6.1.1.4
inference: COORDINATES: protein motif:HMM:TIGR00396.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MTDYNHSEIEKKWQKKWKGDRVFETKEQQGKEKYYCLVMLPYPSGNLHMGHVRNYSIGDVFARFHKMTGKNVLHPMGWDAFGLPAENAAIKNKIHPAKWTKQNIAHMREQLKVLGISYDWNREFATCTPEYYRWNQWFFIKMWERGLIFRKSANVNWCPSCNTVLANEQVSKGLCWRCDSHTQQRDLEQWFIKITDYADELLEGHKQLCGWPEQVLSMQKDWIGKSFGMEIEFAVTGTGKKLKIFTTRPDTLFGATFIVVAPEHKIIDEMKSQITNYNEIAKYVIESGGKSNIERSSCKEKTGIRLEGINALNPAIGEEIPIFTADYVLAGYGTGAIMAVPAHDQRDWEFAKKYNIPVIEVIKSSNSCDGNQSVDKDIYEDKGVLVNSRQFNGIKSSEAFDIISEWVEKQDFGKKIINFKLKDWLISRRRYWGTPIPMIHCKICGTVPVPEKDLPVMLPEDAEFTGEGESPLKSSKTFVNVKCPKCGMDAKRETDTMDTFVDSSWYYARYCDNRNDNAAFDSAKVNYWMPVNQYVGGIEHACMHLIYSRFWYKVMRDLGIVKHGEPFENLLTQGMVTLSGSVMSKSKGNIVSPDEIIEKYGADTARLFTLFAAPPQKQLDWSMEGVEGCWRFINRIWRLFDIVHTKTEFSATEKDKNDILRIMHRTIKKVTVDIEKEFQFNTAISSVMELVNALYTYKYHSNDDGISAEVYKTVILLMTPFTPHLCEEIWDRLGYKEYVSVYPWPSFDESTIKQSSVELPVQINGKLRGKIIVSAEDSEDEVKKIIEKDKKIAVHLKGRQIAKFIYVKGRIVTILLDS
SIO_010081: H0I88_RS02340
subclass of: SO_0000673
so part of: H0I88_RS02340
location: 490850..493306
location: region:490850-493306:1
so has part: feature:490850-493306:1:exon

WP_015423338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490850-493306:1:exon

H0I88_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: lptE
locus tag: H0I88_RS02345
old locus tag: TGRD_326
old locus tag: TGRD_329
old locus tag: TGRD_RS02275
so part of: sequence
location: 493322..493855
location: region:493322-493855:1
so has part: feature:493322-493855:1:exon
subclass of: SO_0000010

position:493322:1
position: 493322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493855:1
position: 493855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493322-493855:1:exon

H0I88_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: lptE
locus tag: H0I88_RS02345
old locus tag: TGRD_326
old locus tag: TGRD_329
old locus tag: TGRD_RS02275
inference: COORDINATES: protein motif:HMM:NF016290.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS assembly lipoprotein LptE
translation: MKKFMLILALFILLSAYLISCSYLRSPAAVKILPEYIKKVYVKSFNSTKQFDIEIEFTDVIKKEIIMDGRLSLADTEEEADVVFIAIIEKYSLQPLTYDENRMSLRYKLSIKANILLSDKNKNVIWKNTNIERVHIYRDCIRDLYNGIIFYDGMSERKARSVVFNKFSKYIVRQMAR
SIO_010081: H0I88_RS02345
subclass of: SO_0000673
so part of: H0I88_RS02345
location: 493322..493855
location: region:493322-493855:1
so has part: feature:493322-493855:1:exon

WP_015423339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493322-493855:1:exon

H0I88_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: prfB
locus tag: H0I88_RS02350
old locus tag: TGRD_327
old locus tag: TGRD_330
old locus tag: TGRD_RS02280
so part of: sequence
location: 494069..495103
location: region:494069-495103:1
so has part: feature:494069-495103:1:exon
subclass of: SO_0000010

position:494069:1
position: 494069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495103:1
position: 495103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494069-495103:1:exon

H0I88_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: prfB
locus tag: H0I88_RS02350
old locus tag: TGRD_327
old locus tag: TGRD_330
old locus tag: TGRD_RS02280
inference: COORDINATES: protein motif:HMM:TIGR00020.2
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MDSKLNRIKNLELEILEPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDGSKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFKTEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDVIPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIKNRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYKTLRMDLVMDGDIDDFISAYLSWKLEKKK
SIO_010081: H0I88_RS02350
subclass of: SO_0000673
so part of: H0I88_RS02350
location: 494069..495103
location: region:494069-495103:1
so has part: feature:494069-495103:1:exon

WP_198407729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494069-495103:1:exon

H0I88_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02355
old locus tag: TGRD_328
old locus tag: TGRD_331
old locus tag: TGRD_RS02285
so part of: sequence
location: 495237..495857
location: region:495237-495857:1
so has part: feature:495237-495857:1:exon
subclass of: SO_0000010

position:495237:1
position: 495237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495857:1
position: 495857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495237-495857:1:exon

H0I88_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02355
old locus tag: TGRD_328
old locus tag: TGRD_331
old locus tag: TGRD_RS02285
EC number: 4.1.1.65
inference: COORDINATES: protein motif:HMM:NF003685.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylserine decarboxylase
translation: MRIVKEGYQFIIVPLILGLVFLIAGRGIILIAMVTLCVLVSLFCLYFFRDPEIEITRGDNLILSPCNGMVLEVSENETEKVIRVFLSVLDVHLQRSPVPGKVKSVEYKSGKFLKAIEPQAHIVNEQNIITIENESGKYLVKQIAGILARRCVSWVKPGDVLKPGDKIGMIKFSSQVDLHIPRNTDIKVSRGDKVVSGVTIFATLNK
SIO_010081: H0I88_RS02355
subclass of: SO_0000673
so part of: H0I88_RS02355
location: 495237..495857
location: region:495237-495857:1
so has part: feature:495237-495857:1:exon

WP_015423341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495237-495857:1:exon

H0I88_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: pssA
locus tag: H0I88_RS02360
old locus tag: TGRD_329
old locus tag: TGRD_332
old locus tag: TGRD_RS02290
so part of: sequence
location: 495867..496670
location: region:495867-496670:1
so has part: feature:495867-496670:1:exon
subclass of: SO_0000010

position:495867:1
position: 495867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496670:1
position: 496670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495867-496670:1:exon

H0I88_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: pssA
locus tag: H0I88_RS02360
old locus tag: TGRD_329
old locus tag: TGRD_332
old locus tag: TGRD_RS02290
EC number: 2.7.8.8
inference: COORDINATES: protein motif:HMM:TIGR00473.1
GO function: GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol--serine O-phosphatidyltransferase
translation: MSENLKKGIYIIPSLFTCGNISCGCLSIISSINGNFTKSSWLLIFAIAFDMMDGRIARLTKTTSEFGVQLDSLSDLTSFGIAPAVMMYQLVLTSMGKIGKSIFVLFILCSALRLAKFNVKANAKKVHSSFMGLPTPASAGLLISFVLSYELFIVDPGQSLTFNTIPILMKNMPAFFKTMPVIMVLLSLLMVSNIPYVSFKKMEFSSPKVFRLLILMVLFVWLIATFPQNIIFILFTLYAFSGIFAYATKYWKILKRIYSSKVENNGN
SIO_010081: H0I88_RS02360
subclass of: SO_0000673
so part of: H0I88_RS02360
location: 495867..496670
location: region:495867-496670:1
so has part: feature:495867-496670:1:exon

WP_015423342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495867-496670:1:exon

H0I88_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02365
old locus tag: TGRD_330
old locus tag: TGRD_333
old locus tag: TGRD_RS02295
so part of: sequence
location: 496660..497172
location: region:496660-497172:1
so has part: feature:496660-497172:1:exon
subclass of: SO_0000010

position:496660:1
position: 496660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497172:1
position: 497172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496660-497172:1:exon

H0I88_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02365
old locus tag: TGRD_330
old locus tag: TGRD_333
old locus tag: TGRD_RS02295
EC number: 2.7.4.6
inference: COORDINATES: protein motif:HMM:NF012554.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate kinase
translation: MEIEQLLILVKPDGIKKSLTGNILTKLSESRMVIIGAKIVKVSRDLAEAHYCHLKDKLFFNELLDYIRGKIYGEPWDRVLAFVYQGEDAVSRMRKIAGATNPEEADHVSIRGSYGRITTKGVYENVIHCSSDPSEAAREIKLWFKPEEIVKEIYPVKKIVVEKEEKIVWA
SIO_010081: H0I88_RS02365
subclass of: SO_0000673
so part of: H0I88_RS02365
location: 496660..497172
location: region:496660-497172:1
so has part: feature:496660-497172:1:exon

WP_015423343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496660-497172:1:exon

H0I88_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02370
old locus tag: TGRD_331
old locus tag: TGRD_334
old locus tag: TGRD_RS02300
so part of: sequence
location: 497297..499066
location: region:497297-499066:1
so has part: feature:497297-499066:1:exon
subclass of: SO_0000010

position:497297:1
position: 497297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499066:1
position: 499066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497297-499066:1:exon

H0I88_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02370
old locus tag: TGRD_331
old locus tag: TGRD_334
old locus tag: TGRD_RS02300
EC number: 4.1.1.32
inference: COORDINATES: protein motif:HMM:NF003253.0
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (GTP)
translation: MATPIELFIEEMQKLFQPDEVYIMDGSQEEAEKLANIAQKSKVDGKIVLEKLNEKEYPNSYYHRSNTNDVARTEHLTFVCTPSKTEAGPNNNWMDPVEAKEKMMGFFKGAMKGRTMYVIPFVMGPPKSKYAKNCIQVTDSVYVALSMRIMARVGKQAVERIGSSSDFFRGVHSIGDVNPDRRFIMHFPQENLVMSFGSGYGGNALLGKKCYSLRIGSYLGYQEGWLAEHMIIIGVEVPDGKVIYFLGAFPSACGKTNLALLEPVLKGYKVWTLGDDIAWINVGEDGRLYAINPEAGFFGVAPGTGLKTNPIMIKTLKNDKFFPTLFTNTAVDNSDNTPWWEGASDEIPSDLTNWQGQKYDKNLDKAAAHPNSRFTVSIYNCPTLSPEYNNPKGVPISGIIFGGRRKDTIPLVYEAKDWNSGVFTASIIGSETTAASSGQVGNVRRDPMAMLPFCGYNMGEYFQHWINIGKKVKKLPKIFMVNWFRKDENGKFMWPGFRDNSRIIKWMIYRIEGKTGAKESEIGLFPEENAIDLSGLDIKKETMEKLLKVDKQDWKREVAMIEEFYAKFGDKIPRDLRKHLTELKKKLGL
SIO_010081: H0I88_RS02370
subclass of: SO_0000673
so part of: H0I88_RS02370
location: 497297..499066
location: region:497297-499066:1
so has part: feature:497297-499066:1:exon

WP_015423344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497297-499066:1:exon

H0I88_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: aspS
locus tag: H0I88_RS02375
old locus tag: TGRD_332
old locus tag: TGRD_335
old locus tag: TGRD_RS02305
so part of: sequence
location: 499493..501247
location: region:499493-501247:1
so has part: feature:499493-501247:1:exon
subclass of: SO_0000010

position:499493:1
position: 499493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501247:1
position: 501247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499493-501247:1:exon

H0I88_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: aspS
locus tag: H0I88_RS02375
old locus tag: TGRD_332
old locus tag: TGRD_335
old locus tag: TGRD_RS02305
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016291490.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MKRSGYCGDIRESSIGKEIAVCGWVHSRRDHGGVIFIDLRDREGILQIVFQPENKEIFEAAEKLRSEYVIAVKGWVRNRPFGTLNTNMSTGNVELVAVELKILNTSPGLPFEISDYIDTSEELRLKYRYLDLRRPNLQKNFVMRHKISKEIRNFLNEEGFLEIETPFLTKSTPEGARDFLVPSRLHHGNFFALPQSPQLFKQILMSAGFDKYYQIVRCFRDEDLRADRQPEFTQVDVEMSFVDEEDVMVVIERMLARVFKMTLNLDIKMPFERMPYSEAMLRFGSDKPDTRFEVEIKDFSRELKNSGFSVFSSVISKGGIVRGLCIPKGASFSRSEIAGLTKFVGEYGAKGLVWMKITDTGADSNIVKYFKEYEIRVFISKLNAKSGDLIVFLADEEKTVAQGLGALRLKVGRESGLIDKNKFNFLWVVDFPLMEWDKEEQRWQALHHPFTLPKDADSLTKENAGRAKAKAYDVVLNGIELGGGSIRIHKSGIQKKIFNILDISDESAEKKFGFLLKALTYGAPPHGGAALGFDRLCALISGEDSIREVIAFPKTQKAVDPLSNAPAAVSDNHLKELGLQQIEN
SIO_010081: H0I88_RS02375
subclass of: SO_0000673
so part of: H0I88_RS02375
location: 499493..501247
location: region:499493-501247:1
so has part: feature:499493-501247:1:exon

WP_015423345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499493-501247:1:exon

H0I88_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02380
old locus tag: TGRD_333
old locus tag: TGRD_336
old locus tag: TGRD_RS02310
so part of: sequence
location: 501284..502852
location: region:501284-502852:1
so has part: feature:501284-502852:1:exon
subclass of: SO_0000010

position:501284:1
position: 501284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502852:1
position: 502852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501284-502852:1:exon

H0I88_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02380
old locus tag: TGRD_333
old locus tag: TGRD_336
old locus tag: TGRD_RS02310
inference: COORDINATES: protein motif:HMM:NF019318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HDIG domain-containing protein
translation: MPEYPVFTDSLKLNNFAVSLFGVTAKKRKLQKNKKTMNNPLEKIRFWIIDILIKSARKLEAKRPKNPVVRNPKNLFSKEIKIPVFISSGFTIIAIYCMFVMGFAVNCKTMLATSIFITGSAVFFIIYVKNREKIILKDRDTVVLICLLFIIAVLIFQILIEYISPFVSPVSAFALMSAMLLSPRFGTMHAVFLSLFMGFLNVMRFDIFFLMLCGSIIALADLHNIRRRSDFISTGIKIAVVNTAIISMFYFFGSYNILEFERNIFYGLLNSAFAVIILLVFMPLFEKLFSRTTSMKLIELSDFDNPLLKRLMLEAPGTYHHSVMTADIAEQAANVINDNSLLARVGAYYHDIGKLKNPQYFIENQTSGYNPHDELTPAMSNLILVSHVKDGVTLAKKYNVDNEIINIIGQHHGTTLIHTFYHRALEESPDIDIENFKYPGPKPATKIAAIVMISDSSEAACRSIEEPTAARIKDTVEKIINNKFIDGQFSNCPITLKDLETIRDSIISTIIGIYHIRIEYKE
SIO_010081: H0I88_RS02380
subclass of: SO_0000673
so part of: H0I88_RS02380
location: 501284..502852
location: region:501284-502852:1
so has part: feature:501284-502852:1:exon

WP_125266985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501284-502852:1:exon

H0I88_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ybeY
locus tag: H0I88_RS02385
old locus tag: TGRD_334
old locus tag: TGRD_337
old locus tag: TGRD_RS02315
so part of: sequence
location: 502849..503274
location: region:502849-503274:1
so has part: feature:502849-503274:1:exon
subclass of: SO_0000010

position:502849:1
position: 502849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503274:1
position: 503274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502849-503274:1:exon

H0I88_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: ybeY
locus tag: H0I88_RS02385
old locus tag: TGRD_334
old locus tag: TGRD_337
old locus tag: TGRD_RS02315
inference: COORDINATES: protein motif:HMM:TIGR00043.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MKKDNNIINFVNFPKQHVPLLKIAAATVLKSEKIKRYQVNFIMVDDKEIRKLNTKYRKIKRITDVISFLVVPEFFMGDIYISKTRSQEQAKEYSNTWQQELAYLVIHGLLHLCGYTDYDAVNKTKMFTKQDKIFKCLFYRL
SIO_010081: H0I88_RS02385
subclass of: SO_0000673
so part of: H0I88_RS02385
location: 502849..503274
location: region:502849-503274:1
so has part: feature:502849-503274:1:exon

WP_015423347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502849-503274:1:exon

H0I88_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02390
old locus tag: TGRD_RS02325
so part of: sequence
location: 503690..503896
location: region:503690-503896:1
so has part: feature:503690-503896:1:exon
subclass of: SO_0000010

position:503690:1
position: 503690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503896:1
position: 503896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503690-503896:1:exon

H0I88_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02390
old locus tag: TGRD_RS02325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVCFLNVIANDEIDKETSIILKRMLNFRDLSVKRIMMPFKYIESADLSFEEECFLDIVVEISRNDYA
SIO_010081: H0I88_RS02390
subclass of: SO_0000673
so part of: H0I88_RS02390
location: 503690..503896
location: region:503690-503896:1
so has part: feature:503690-503896:1:exon

WP_095558753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503690-503896:1:exon

H0I88_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02395
old locus tag: TGRD_RS02330
so part of: sequence
location: 504139..504369
location: region:504139-504369:1
so has part: feature:504139-504369:1:exon
subclass of: SO_0000010

position:504139:1
position: 504139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504369:1
position: 504369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504139-504369:1:exon

H0I88_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02395
old locus tag: TGRD_RS02330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFAERKILQIMMPLSDIFAVDLDLPKEKPKYSRVSVYRGNINNIVGIIYTKNLAVACRNFGIIVLEDLISGLLCV
SIO_010081: H0I88_RS02395
subclass of: SO_0000673
so part of: H0I88_RS02395
location: 504139..504369
location: region:504139-504369:1
so has part: feature:504139-504369:1:exon

WP_095558754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504139-504369:1:exon

H0I88_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: recO
locus tag: H0I88_RS02400
old locus tag: TGRD_pseudo_72
old locus tag: TGRD_RS02340
so part of: sequence
location: 504712..505362
location: region:504712-505362:1
so has part: feature:504712-505362:1:exon
subclass of: SO_0000010

position:504712:1
position: 504712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505362:1
position: 505362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504712-505362:1:exon

H0I88_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: recO
locus tag: H0I88_RS02400
old locus tag: TGRD_pseudo_72
old locus tag: TGRD_RS02340
inference: COORDINATES: protein motif:HMM:TIGR00613.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecO
translation: MYYAIKGLVLNAKIQGENDKLITVYSYEWGKIQAVVPSAKKIAAKLSSATEPLTESEFMVFGSYPVLRPKVTGANIIENNTKIKVDFKRNLYALYAAEVSDKFAPFNFENIVKYNLIVRIWQILSICKYPKRALTAFILRFLKLSGYAFSDYLRNNKAFAGIGIEKSIERLSNCSGDNIDVLEEIEEEKIWNCVENYLTNYIRRPALSVFLEKIGE
SIO_010081: H0I88_RS02400
subclass of: SO_0000673
so part of: H0I88_RS02400
location: 504712..505362
location: region:504712-505362:1
so has part: feature:504712-505362:1:exon

WP_095558756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504712-505362:1:exon

H0I88_RS05940
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05940
so part of: sequence
location: 505949..506221
location: region:505949-506221:1
so has part: feature:505949-506221:1:exon
subclass of: SO_0000010

position:505949:1
position: 505949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506221:1
position: 506221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505949-506221:1:exon

H0I88_RS05940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MMFAFITPAIITGSVAGRMKFQTLFFFIALVNPCIYPLAHTWHVVIVGEIGVLDFAVGNVIHISSGTTGLILAVLLGKRVDYATDFIPHT
SIO_010081: H0I88_RS05940
subclass of: SO_0000673
so part of: H0I88_RS05940
location: 505949..506221
location: region:505949-506221:1
so has part: feature:505949-506221:1:exon

WP_198407720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505949-506221:1:exon

H0I88_RS05950
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05950
so part of: sequence
location: 506317..506487
location: region:506317-506487:1
so has part: feature:506317-506487:1:exon
subclass of: SO_0000010

position:506317:1
position: 506317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506487:1
position: 506487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506317-506487:1:exon

H0I88_RS05950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05950
inference: COORDINATES: protein motif:HMM:NF013104.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MYLWQQLQSAALDLINVIGITVSPVCYFGIVLIKRIFKIDYALDAFGRHGVGGIWG
SIO_010081: H0I88_RS05950
subclass of: SO_0000673
so part of: H0I88_RS05950
location: 506317..506487
location: region:506317-506487:1
so has part: feature:506317-506487:1:exon

WP_198407722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506317-506487:1:exon

H0I88_RS05955
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05955
so part of: sequence
location: 506491..506658
location: region:506491-506658:1
so has part: feature:506491-506658:1:exon
subclass of: SO_0000010

position:506491:1
position: 506491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506658:1
position: 506658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506491-506658:1:exon

H0I88_RS05955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGVFVNPAISSGKPGLIFGETVQFISQIEGIGIEYLLCSGIASIFMPLLASCSR
SIO_010081: H0I88_RS05955
subclass of: SO_0000673
so part of: H0I88_RS05955
location: 506491..506658
location: region:506491-506658:1
so has part: feature:506491-506658:1:exon

WP_198407723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506491-506658:1:exon

H0I88_RS05960
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05960
so part of: sequence
location: 506910..507071
location: region:506910-507071:1
so has part: feature:506910-507071:1:exon
subclass of: SO_0000010

position:506910:1
position: 506910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507071:1
position: 507071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506910-507071:1:exon

H0I88_RS05960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: P-II family nitrogen regulator
translation: MTISQVIGCGKQKDYKEFVCGTEIAITMLPKIKIEIIVSSEEWNDKSNSGSGL
SIO_010081: H0I88_RS05960
subclass of: SO_0000673
so part of: H0I88_RS05960
location: 506910..507071
location: region:506910-507071:1
so has part: feature:506910-507071:1:exon

WP_197702031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506910-507071:1:exon

H0I88_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: mnmA
locus tag: H0I88_RS02415
old locus tag: TGRD_335
old locus tag: TGRD_338
old locus tag: TGRD_RS02355
so part of: sequence
location: complement(507274..508344)
location: region:507274-508344:-1
so has part: feature:507274-508344:-1:exon
subclass of: SO_0000010

position:507274:-1
position: 507274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508344:-1
position: 508344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507274-508344:-1:exon

H0I88_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: mnmA
locus tag: H0I88_RS02415
old locus tag: TGRD_335
old locus tag: TGRD_338
old locus tag: TGRD_RS02355
EC number: 2.8.1.13
inference: COORDINATES: protein motif:HMM:TIGR00420.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MKILIGLSGGVDSAVAAYLLKKQGYEVTGTTMSIWDNFLPAPKTKVNDSCLGPENENIETAHKIADFLTIPLYVTDCSGEYKKVVLENFRNEYKEGRTPNPCIRCNAYIKFGILPAAVKKTGLSFDKFATGHYANIGFDSSTNMYKLYKAADLNKDQTYFLYRLTQKTLSETIFPLGIYTKEQVRNIAKKIGLPSAEKPDSQDFYCGDYNDILQFPANPGNIVDKNGRVLGKHNGIWNYTIGKRKGLGLLGGTKDPLYVINISAKQNMVTIGTKEDLYSSSLTAKKVSWCSILPPKKTIEATAKIRRQHKPEKAFIIPQEDSSVKVEFAQPQMSVTAGQSIVFYKDDTVLGGGVII
SIO_010081: H0I88_RS02415
subclass of: SO_0000673
so part of: H0I88_RS02415
location: complement(507274..508344)
location: region:507274-508344:-1
so has part: feature:507274-508344:-1:exon

WP_095558757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507274-508344:-1:exon

H0I88_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02420
old locus tag: TGRD_RS05920
so part of: sequence
location: complement(508742..508912)
location: region:508742-508912:-1
so has part: feature:508742-508912:-1:exon
subclass of: SO_0000010

position:508742:-1
position: 508742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508912:-1
position: 508912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508742-508912:-1:exon

H0I88_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02420
old locus tag: TGRD_RS05920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTNIESILDKAFQSNALHEKEVLYILETKDTKKLLSAADEIRKKYTGDKVHLRMI
SIO_010081: H0I88_RS02420
subclass of: SO_0000673
so part of: H0I88_RS02420
location: complement(508742..508912)
location: region:508742-508912:-1
so has part: feature:508742-508912:-1:exon

WP_158302791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508742-508912:-1:exon

H0I88_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02425
old locus tag: TGRD_RS06210
so part of: sequence
location: 509194..509304
location: region:509194-509304:1
so has part: feature:509194-509304:1:exon
subclass of: SO_0000010

position:509194:1
position: 509194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509304:1
position: 509304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509194-509304:1:exon

H0I88_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02425
old locus tag: TGRD_RS06210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PIG-L family deacetylase
translation: MVITSHQDDEAVVCAVTAIKHVKTGSYVEIAFLKKE
SIO_010081: H0I88_RS02425
subclass of: SO_0000673
so part of: H0I88_RS02425
location: 509194..509304
location: region:509194-509304:1
so has part: feature:509194-509304:1:exon

WP_173253552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509194-509304:1:exon

H0I88_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02430
old locus tag: TGRD_RS02365
so part of: sequence
location: 509739..509921
location: region:509739-509921:1
so has part: feature:509739-509921:1:exon
subclass of: SO_0000010

position:509739:1
position: 509739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509921:1
position: 509921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509739-509921:1:exon

H0I88_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02430
old locus tag: TGRD_RS02365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MISAEPPLVDIAKGMDCKVVKNRFEYFARQRNFALSQCSYEWIVCLDSDERITPALKKEI
SIO_010081: H0I88_RS02430
subclass of: SO_0000673
so part of: H0I88_RS02430
location: 509739..509921
location: region:509739-509921:1
so has part: feature:509739-509921:1:exon

WP_095558759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509739-509921:1:exon

H0I88_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02435
old locus tag: TGRD_RS02370
so part of: sequence
location: 510072..510398
location: region:510072-510398:1
so has part: feature:510072-510398:1:exon
subclass of: SO_0000010

position:510072:1
position: 510072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510398:1
position: 510398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510072-510398:1:exon

H0I88_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02435
old locus tag: TGRD_RS02370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGMKILIIKVKSFILKAIFSTILTPYNSIKQFIKKSDFYTDLRSKEMLKKGIRFRVLNLFVNPLVMFVKMYFIKKGFLDGLSGFILALSYSSLYTLMKYIKLWELENK
SIO_010081: H0I88_RS02435
subclass of: SO_0000673
so part of: H0I88_RS02435
location: 510072..510398
location: region:510072-510398:1
so has part: feature:510072-510398:1:exon

WP_232501241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510072-510398:1:exon

H0I88_RS06395
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: lpxK
locus tag: H0I88_RS06395
so part of: sequence
location: 510395..510985
location: region:510395-510985:1
so has part: feature:510395-510985:1:exon
subclass of: SO_0000010

position:510395:1
position: 510395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510985:1
position: 510985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510395-510985:1:exon

H0I88_RS06395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: lpxK
locus tag: H0I88_RS06395
EC number: 2.7.1.130
inference: COORDINATES: protein motif:HMM:NF014645.2
GO function: GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraacyldisaccharide 4'-kinase
translation: MSRFLYPLSLIYSVLYKADRKFSILKKLSKPAISVGNLAWGGTGKTTVAIELLNLLVKNNLKPAVLTRGYRRRGRSSVILKNGAVGISASDSGDEPLLIAGNVPKACVIVGADRYNNALKHEREINPDIYVLDDGFQHWNIQRDLDIVCINAANPFGNGMLMPAGILRERPAALKRAGFVIITNSAIWFQMQRLKN
SIO_010081: H0I88_RS06395
subclass of: SO_0000673
so part of: H0I88_RS06395
location: 510395..510985
location: region:510395-510985:1
so has part: feature:510395-510985:1:exon

WP_095558761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510395-510985:1:exon

H0I88_RS06400
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06400
so part of: sequence
location: 510955..511350
location: region:510955-511350:1
so has part: feature:510955-511350:1:exon
subclass of: SO_0000010

position:510955:1
position: 510955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511350:1
position: 511350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510955-511350:1:exon

H0I88_RS06400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06400
EC number: 2.7.1.130
inference: COORDINATES: protein motif:HMM:NF014645.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraacyldisaccharide 4'-kinase
translation: MVSDAALEKLEKTGFVLSGQRSIITYYGGFKYKTPDLNTEFNIELLKKSNVYSLSAIGFAEGFRNSVKKSGIEVKDSIALRDHSEYDNNLLEKIINQNPKNSYFIVTAKDAVKFQNIDAYIYCGSCCKAAV
SIO_010081: H0I88_RS06400
subclass of: SO_0000673
so part of: H0I88_RS06400
location: 510955..511350
location: region:510955-511350:1
so has part: feature:510955-511350:1:exon

WP_095558762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510955-511350:1:exon

H0I88_RS06210
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06210
so part of: sequence
location: 511663..511839
location: region:511663-511839:1
so has part: feature:511663-511839:1:exon
subclass of: SO_0000010

position:511663:1
position: 511663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511839:1
position: 511839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511663-511839:1:exon

H0I88_RS06210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKTQDGYVLRGATDFNVDLKKSYTVGDSIRDYLLGFNMSGKRVFLFLRDAAENSRRT
SIO_010081: H0I88_RS06210
subclass of: SO_0000673
so part of: H0I88_RS06210
location: 511663..511839
location: region:511663-511839:1
so has part: feature:511663-511839:1:exon

WP_232501242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511663-511839:1:exon

H0I88_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02450
old locus tag: TGRD_RS05925
so part of: sequence
location: 512138..512314
location: region:512138-512314:1
so has part: feature:512138-512314:1:exon
subclass of: SO_0000010

position:512138:1
position: 512138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512314:1
position: 512314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512138-512314:1:exon

H0I88_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02450
old locus tag: TGRD_RS05925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVGVEYILYDRYGASLCPLTVKVLRKEAETSLWYEKMSITAYLSGRIVMIKAEFPYL
SIO_010081: H0I88_RS02450
subclass of: SO_0000673
so part of: H0I88_RS02450
location: 512138..512314
location: region:512138-512314:1
so has part: feature:512138-512314:1:exon

WP_158302792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512138-512314:1:exon

H0I88_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: gpmA
locus tag: H0I88_RS02455
old locus tag: TGRD_336
old locus tag: TGRD_340
old locus tag: TGRD_RS02385
so part of: sequence
location: 513423..514172
location: region:513423-514172:1
so has part: feature:513423-514172:1:exon
subclass of: SO_0000010

position:513423:1
position: 513423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514172:1
position: 514172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513423-514172:1:exon

H0I88_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: gpmA
locus tag: H0I88_RS02455
old locus tag: TGRD_336
old locus tag: TGRD_340
old locus tag: TGRD_RS02385
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MYKVVLIRHGESVWNKENKFTGWSDVDLSEKGNEEALKAGKQLKKDGFTFDLAYTSVLKRAIKTLWNVLNTMDLLWTPVVKDWRLNERHYGALQGLNKAETAAKYGEEQVKIWRRSYDIAPMALDENDERYPGKEARYSGLLKGEIPLAECLKDTVARVVPYWGKEVVPQIKAGKKIIIAAHGNSLRALVKYLDNISDSNIVNLNIPTAMPLVYELDENLKAVKNYYLGDPEAVKKAMETVASQGKVKK
SIO_010081: H0I88_RS02455
subclass of: SO_0000673
so part of: H0I88_RS02455
location: 513423..514172
location: region:513423-514172:1
so has part: feature:513423-514172:1:exon

WP_015423350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513423-514172:1:exon

H0I88_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02460
old locus tag: TGRD_337
old locus tag: TGRD_341
old locus tag: TGRD_RS02390
so part of: sequence
location: 514204..515844
location: region:514204-515844:1
so has part: feature:514204-515844:1:exon
subclass of: SO_0000010

position:514204:1
position: 514204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515844:1
position: 515844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514204-515844:1:exon

H0I88_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02460
old locus tag: TGRD_337
old locus tag: TGRD_341
old locus tag: TGRD_RS02390
inference: COORDINATES: protein motif:HMM:NF013593.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIRKFKLLLRNNKILLIIVSIVLILIVLSIWGLSKLESFYRIMTIAMLPVNLLVSFTNAAAFVFMYVLFSRSGFEKLKKNKIKAGDIAVSFKEVIGLESAKREAFEVVQLIKDRKQLQKIGGKIIKGILLIGPPGCGKTLLAKAIATECKVPFLSMAGSEFVEVFVGVGASRVRNLFKKAREYAYAEGACIIFIDEIEVIGRGRSFSYMGGGEEINSTQNQLLVEMDGLDNKKSNVIVIAATNADDSVLDKALLRPGRFDRKIAITLPNLKERERLFGFYLKKVKVVPEVKVCRLAKKAVYKSPADIENIIKEAALIAVRKKKEVIDIKDLSEAMDRIDLGMETYIDMTPKELGMTAYHEAGHAVAIYLMHPTDDVFKVTVKSHHGSLGLVAPFPKEELQIEQREELLSDIMVSLAGYVAEKIKYNTTTTGVSMDFSHAMTTANNMVWKVGMGNGGFVGDFSVIPRKEMSQSLKEKLNNETISIINSCYAKIEEFLKTNWDAVDAVAKKLISEKELDFDELEEVMKTVGKRKPKPSEYNALVGCAE
SIO_010081: H0I88_RS02460
subclass of: SO_0000673
so part of: H0I88_RS02460
location: 514204..515844
location: region:514204-515844:1
so has part: feature:514204-515844:1:exon

WP_015423351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514204-515844:1:exon

H0I88_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02465
old locus tag: TGRD_338
old locus tag: TGRD_342
old locus tag: TGRD_RS02395
so part of: sequence
location: 515860..516609
location: region:515860-516609:1
so has part: feature:515860-516609:1:exon
subclass of: SO_0000010

position:515860:1
position: 515860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516609:1
position: 516609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515860-516609:1:exon

H0I88_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02465
old locus tag: TGRD_338
old locus tag: TGRD_342
old locus tag: TGRD_RS02395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMLKYIIFLLVIVFFFNDCSVSYPKNYIVRSLEKLVKKECNQDSKAYLVGRTLYLDMEFDEITSADDKTALQAIRKMNLAIFTAGRIVLSSDSDIKYIVVTTYDSYKNLAFRIAHNIDDIKNYFYMRISHSNFNSRKLLEIEGPLTAANMIEDRHCIADQEYIGRLIVSQINMLFAADVVLVQMPRLQYVAVENETLIFSVSDIVDSKNIYLVKNILLEKTKDYSKKYNIYFKGIKVVAFGGEALLID
SIO_010081: H0I88_RS02465
subclass of: SO_0000673
so part of: H0I88_RS02465
location: 515860..516609
location: region:515860-516609:1
so has part: feature:515860-516609:1:exon

WP_145971072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515860-516609:1:exon

H0I88_RS05970
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05970
so part of: sequence
location: 517341..517586
location: region:517341-517586:1
so has part: feature:517341-517586:1:exon
subclass of: SO_0000010

position:517341:1
position: 517341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517586:1
position: 517586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517341-517586:1:exon

H0I88_RS05970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLADRYVKIDYKSYEDFIENCKINVPENFNFAFDVVDETAYISPDKKAMVWCNPEGEEKVFTFNDIRRESNRVANFLNLLG
SIO_010081: H0I88_RS05970
subclass of: SO_0000673
so part of: H0I88_RS05970
location: 517341..517586
location: region:517341-517586:1
so has part: feature:517341-517586:1:exon

WP_198407724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517341-517586:1:exon

H0I88_RS05975
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05975
so part of: sequence
location: 517727..518107
location: region:517727-518107:1
so has part: feature:517727-518107:1:exon
subclass of: SO_0000010

position:517727:1
position: 517727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518107:1
position: 518107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517727-518107:1:exon

H0I88_RS05975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIAVADERIADVIGEAKKLKTVISVSGYTKDWVEYYKEIKKFSAIFERPSGNEATKVNDSSLLYFTSGTSPLGHIITARFWQNLNDESLHLTVAADKLHGERYTDSGCAKPAFLLMLMKGLALTI
SIO_010081: H0I88_RS05975
subclass of: SO_0000673
so part of: H0I88_RS05975
location: 517727..518107
location: region:517727-518107:1
so has part: feature:517727-518107:1:exon

WP_232501243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517727-518107:1:exon

H0I88_RS05980
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS05980
so part of: sequence
location: 518643..518888
location: region:518643-518888:1
so has part: feature:518643-518888:1:exon
subclass of: SO_0000010

position:518643:1
position: 518643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518888:1
position: 518888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518643-518888:1:exon

H0I88_RS05980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS05980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDHPCVLECVECRGYKERGAVIKILAKGYKASLELITELQNHVKKVTAPYKYPIIIEFVKEISKTISGNIKRIEIRESDKK
SIO_010081: H0I88_RS05980
subclass of: SO_0000673
so part of: H0I88_RS05980
location: 518643..518888
location: region:518643-518888:1
so has part: feature:518643-518888:1:exon

WP_198407726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518643-518888:1:exon

H0I88_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02480
old locus tag: TGRD_339
old locus tag: TGRD_343
old locus tag: TGRD_RS02410
so part of: sequence
location: 518918..519919
location: region:518918-519919:1
so has part: feature:518918-519919:1:exon
subclass of: SO_0000010

position:518918:1
position: 518918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519919:1
position: 519919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518918-519919:1:exon

H0I88_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02480
old locus tag: TGRD_339
old locus tag: TGRD_343
old locus tag: TGRD_RS02410
inference: COORDINATES: protein motif:HMM:NF013665.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphotransacetylase
translation: MNIRERILELAKKTKSKIILPESFDIRILKAAQILTKDGIASVILLAEDIKEVEKIASAVGVDLNAVEIIKIDINLLNKKKVEEFVDARMKKGMTLQDASDLLKKPLYFSMMYLKSGKCDACVAGAVYDTSDVLRASIQVAGFTECTKLVSSYFLMIPPDGHNIAKEPVLFADCGVNPDPQVLGLKDIAVATVENFKKLFPGRQVNVAMLSFSTKGSANSKVLSKVIEATELVKSHFAGYSDINVDGEFQFDAAVVQSVGKKKASGSSVAGNANILIFPDLNAGNIGYKIAERYGGFQALGPIIQGLALPISDLSRGSSVDDICLICAIMLLK
SIO_010081: H0I88_RS02480
subclass of: SO_0000673
so part of: H0I88_RS02480
location: 518918..519919
location: region:518918-519919:1
so has part: feature:518918-519919:1:exon

WP_015423353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518918-519919:1:exon

H0I88_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02485
old locus tag: TGRD_340
old locus tag: TGRD_344
old locus tag: TGRD_RS02415
so part of: sequence
location: complement(520242..521060)
location: region:520242-521060:-1
so has part: feature:520242-521060:-1:exon
subclass of: SO_0000010

position:520242:-1
position: 520242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521060:-1
position: 521060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520242-521060:-1:exon

H0I88_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02485
old locus tag: TGRD_340
old locus tag: TGRD_344
old locus tag: TGRD_RS02415
inference: COORDINATES: protein motif:HMM:NF024118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MNFCILASGSSGNCSVIWTEKATALIDCGCSAKYIIENLGALGIVPQNLTAALITHAHRDHISTSGLGFLHKNNIPVYLHEDAFEDAFRKYGQKIEECASIPLYENFKIKDIFVESFEVYHKDENVSRTFGFTFSSEINARKYKIGYVTDTGRICRKIIRNLIDSNILVLESNYNRMMLDSSFRSYDNKKWVLSDWGHLANEDAASAIAEIKMLSAGRDSLKYVFLAHISSHHNTPEIALKTTKEILISKGISDIKLFTARRKHRCPVIRIR
SIO_010081: H0I88_RS02485
subclass of: SO_0000673
so part of: H0I88_RS02485
location: complement(520242..521060)
location: region:520242-521060:-1
so has part: feature:520242-521060:-1:exon

WP_158302793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520242-521060:-1:exon

H0I88_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02490
old locus tag: TGRD_341
old locus tag: TGRD_345
old locus tag: TGRD_RS02420
so part of: sequence
location: complement(521063..522112)
location: region:521063-522112:-1
so has part: feature:521063-522112:-1:exon
subclass of: SO_0000010

position:521063:-1
position: 521063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522112:-1
position: 522112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521063-522112:-1:exon

H0I88_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02490
old locus tag: TGRD_341
old locus tag: TGRD_345
old locus tag: TGRD_RS02420
inference: COORDINATES: protein motif:HMM:NF017181.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M42 family metallopeptidase
translation: MEKLLKDLLISDGISGYEENVAKIMTAALSKSCESVEIDNFGNVIGKSGRGKKKIMIAAHMDEIGMTVKHINEKGFIYFIKIGGINDSILPGKTVEIINKKGEHITGIIGTKPPHLMTSEDVKQPLKHDSMFIDIGLSSRNEVLKVADIGDQIIFEPVAGILNGNFYYGKAADNRISCYTMVKVMEMLAKLRDLNAEIYACATVQEEVGLKGGKTSSFKVNPDFALIIDTTVAGDMPGIEEKVSALKLGKGVAITMIEASGRGTIVPQKVRKLMLEAAHENNIPHQIDIIDVGMTDGAVIYTNREGILTGILSIPTRYIHAPTSVFNIKDVNSAVDLAVKTIEKAAGKL
SIO_010081: H0I88_RS02490
subclass of: SO_0000673
so part of: H0I88_RS02490
location: complement(521063..522112)
location: region:521063-522112:-1
so has part: feature:521063-522112:-1:exon

WP_015423355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521063-522112:-1:exon

H0I88_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02495
old locus tag: TGRD_342
old locus tag: TGRD_346
old locus tag: TGRD_RS02425
so part of: sequence
location: complement(522310..523551)
location: region:522310-523551:-1
so has part: feature:522310-523551:-1:exon
subclass of: SO_0000010

position:522310:-1
position: 522310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523551:-1
position: 523551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522310-523551:-1:exon

H0I88_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02495
old locus tag: TGRD_342
old locus tag: TGRD_346
old locus tag: TGRD_RS02425
inference: COORDINATES: protein motif:HMM:NF013594.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metallopeptidase
translation: MNIYTLIMLFFIIAVYLVETAANLLNVKNISNNIPPEFDGYFDREKYSKAQEYLKANTKLSVISSTFFLTAQIIFIVLKGFNYVNTIAVSFSFGTILTGLVFAGIVFSAFEILKIPFSVYSVFIIEENFGFNKMNVKTFISDLLKSWIITAIIGAVIFAAILWLFANVYRYAWLYAFAAIVIFELFITFIAPVTIMPLFNKYTSLEDGELKNSIEEYAKKENFKMKGLFKMDGSKRSTKSNAFFTGFGKFRRIVLFDTLIQKHTVDGLTSILAHEMGHFKLGHIVKHIIFSSALSGIMLFIFSLLIDKAWLYDAFFMRTQDIYAGIIFFSFLYAPVSLIISPILSYFSRKHEYEADLYSITTYRKPQAMINALKKLSVDNMSNLYPHKFKVFLEYSHPPVLERIKAINRIKLG
SIO_010081: H0I88_RS02495
subclass of: SO_0000673
so part of: H0I88_RS02495
location: complement(522310..523551)
location: region:522310-523551:-1
so has part: feature:522310-523551:-1:exon

WP_015423356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522310-523551:-1:exon

H0I88_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: tmk
locus tag: H0I88_RS02500
old locus tag: TGRD_343
old locus tag: TGRD_347
old locus tag: TGRD_RS02430
so part of: sequence
location: 523730..524365
location: region:523730-524365:1
so has part: feature:523730-524365:1:exon
subclass of: SO_0000010

position:523730:1
position: 523730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524365:1
position: 524365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523730-524365:1:exon

H0I88_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: tmk
locus tag: H0I88_RS02500
old locus tag: TGRD_343
old locus tag: TGRD_347
old locus tag: TGRD_RS02430
EC number: 2.7.4.9
inference: COORDINATES: protein motif:HMM:TIGR00041.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MKKNLFITFEGGEGSGKTTHSLLLKKYLEKRGYEVLLTREPGGTILAEAVRRILLNPDSNIVPLSELFLYEAARAQHVEEFVFPALNAGKAVICDRFTDATVAYQGYGRKLNLQLIDSLNSTTSFGLTPVLTIYLDILPSEGLSRAKRAKKLNRKIYSDKIERESLQFHESVREGYLSQAEKYPERIKVVKTQETVEKTEVCIREIIDLVL
SIO_010081: H0I88_RS02500
subclass of: SO_0000673
so part of: H0I88_RS02500
location: 523730..524365
location: region:523730-524365:1
so has part: feature:523730-524365:1:exon

WP_015423357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523730-524365:1:exon

H0I88_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: holB
locus tag: H0I88_RS02505
old locus tag: TGRD_344
old locus tag: TGRD_348
old locus tag: TGRD_RS02435
so part of: sequence
location: 524366..525325
location: region:524366-525325:1
so has part: feature:524366-525325:1:exon
subclass of: SO_0000010

position:524366:1
position: 524366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525325:1
position: 525325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524366-525325:1:exon

H0I88_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: holB
locus tag: H0I88_RS02505
old locus tag: TGRD_344
old locus tag: TGRD_348
old locus tag: TGRD_RS02435
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00678.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta'
translation: MFESILGQKKIKKIISNQVKSGKIAHAYIFVGQDGVGKRLTAVEFAKILNCNVDDFIKTDAGTCGKCISCKKIEKNIHPDLHFIDFARQAELEEECLEKQRTLKIETIRYMQKEVATKIHEGKWKIFIIEPAERMNAAAANSLLKTLEEPPENTIIILIAKHKETIPQTILSRVQTLFFQPLGQNEISSWLMLNCSVDAAKARDIAELSEGSLENAKKLVGKNEKEEFSLWLKFKTRNFYISDILELSKNIAAAGALECVDAMIAEAKKDFRMYPQRTAPALDLLSASRVLLLKNVNAMTVLDNLFFDLSDLKKMSGLL
SIO_010081: H0I88_RS02505
subclass of: SO_0000673
so part of: H0I88_RS02505
location: 524366..525325
location: region:524366-525325:1
so has part: feature:524366-525325:1:exon

WP_015423358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524366-525325:1:exon

H0I88_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ricT
locus tag: H0I88_RS02510
old locus tag: TGRD_345
old locus tag: TGRD_349
old locus tag: TGRD_RS02440
so part of: sequence
location: 525369..526175
location: region:525369-526175:1
so has part: feature:525369-526175:1:exon
subclass of: SO_0000010

position:525369:1
position: 525369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526175:1
position: 526175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525369-526175:1:exon

H0I88_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: ricT
locus tag: H0I88_RS02510
old locus tag: TGRD_345
old locus tag: TGRD_349
old locus tag: TGRD_RS02440
inference: COORDINATES: protein motif:HMM:NF041131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: regulatory iron-sulfur-containing complex subunit RicT
translation: MPMVIGVALRKTKDKIYADVGYFDLKLNDKIILETEHGVEVGTVCEKEKVMQESKDPIGKVLREITEEDKKRLTENERKNLRAWNIVLQKVVKYKLDMKLICVQYIFDRSKLFVYYISGTRVDFRELVKELGRILRTRIQMVQIGVRDESKMVGGIGICGHVLCCQTFLKDFSSVTIDMAKEQDLLLNTAKLSGLCGRLMCCISYENDIYRAVKKELPEIGKTVLTPEGRAKITAIDCIRENVTVDFGDKSFKVFSIKQINESSRKGK
SIO_010081: H0I88_RS02510
subclass of: SO_0000673
so part of: H0I88_RS02510
location: 525369..526175
location: region:525369-526175:1
so has part: feature:525369-526175:1:exon

WP_015423359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525369-526175:1:exon

H0I88_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: metG
locus tag: H0I88_RS02515
old locus tag: TGRD_346
old locus tag: TGRD_350
old locus tag: TGRD_RS02445
so part of: sequence
location: 526176..527714
location: region:526176-527714:1
so has part: feature:526176-527714:1:exon
subclass of: SO_0000010

position:526176:1
position: 526176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527714:1
position: 527714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526176-527714:1:exon

H0I88_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: metG
locus tag: H0I88_RS02515
old locus tag: TGRD_346
old locus tag: TGRD_350
old locus tag: TGRD_RS02445
EC number: 6.1.1.10
inference: COORDINATES: protein motif:HMM:TIGR00398.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MKFYITTPIYYANDIPHIGHSYTTIASDIMARWKRLKGFDVFFLTGTDEHGAKIVAAAKKKGEIPQKLCDKMSAKFKEAWELLNISYTDFIRTTERKHFVSVEKILSILFDKGFIFKKKYEELYCIGCERFYAQKDLDENGCCPFHKTKPVLQSEENYFFRLSSFQNALIDRIVDANHREHIEIQPEERRNEIIGKLKLGLEDVSFSRSAVEWGIPLPFDGGQTAYVWVDALINYITGVGYQENETKFQKYWPADIHLMAKDILWFHSVIWPAILMGAGLPLPKKLYSHGFFTLNGNKMSKSLGNVVSPRELVDKYGVDAARYLAATIIPFGPDGDISWQRLTLKYNTDLANNLGNLISRTLKMAEKYFNLYVPQTIPDLELVRKVVTVLKKKFALNMDNMQFHKAAETLQSAITLVNRQIEIDAPWKLAKTDTDKLASCIYAYLQSADIIIMHLLPFMPTMAEKIWQITGAGCDINLTAKKYFKDAVIPENGFSISNAKLQSPGILFPRIA
SIO_010081: H0I88_RS02515
subclass of: SO_0000673
so part of: H0I88_RS02515
location: 526176..527714
location: region:526176-527714:1
so has part: feature:526176-527714:1:exon

WP_015423360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526176-527714:1:exon

H0I88_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02520
old locus tag: TGRD_RS05930
so part of: sequence
location: 527845..528003
location: region:527845-528003:1
so has part: feature:527845-528003:1:exon
subclass of: SO_0000010

position:527845:1
position: 527845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528003:1
position: 528003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527845-528003:1:exon

H0I88_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02520
old locus tag: TGRD_RS05930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKTEKIENTRISNDFFIYRKVSKSLVGFVGCKKITADLKEIQQSEQIKKIF
SIO_010081: H0I88_RS02520
subclass of: SO_0000673
so part of: H0I88_RS02520
location: 527845..528003
location: region:527845-528003:1
so has part: feature:527845-528003:1:exon

WP_158302794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527845-528003:1:exon

H0I88_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02525
old locus tag: TGRD_RS05935
so part of: sequence
location: 528047..528211
location: region:528047-528211:1
so has part: feature:528047-528211:1:exon
subclass of: SO_0000010

position:528047:1
position: 528047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528211:1
position: 528211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528047-528211:1:exon

H0I88_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02525
old locus tag: TGRD_RS05935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQEGKIKAQASLLENNLEISEAPNSKQNLINLFMDFLSCDYPHIKTKKESVNV
SIO_010081: H0I88_RS02525
subclass of: SO_0000673
so part of: H0I88_RS02525
location: 528047..528211
location: region:528047-528211:1
so has part: feature:528047-528211:1:exon

WP_158302795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528047-528211:1:exon

H0I88_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02530
old locus tag: TGRD_RS02450
so part of: sequence
location: 528253..528567
location: region:528253-528567:1
so has part: feature:528253-528567:1:exon
subclass of: SO_0000010

position:528253:1
position: 528253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528567:1
position: 528567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528253-528567:1:exon

H0I88_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02530
old locus tag: TGRD_RS02450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNAGNESENFYRKFNELFKDFQVSMQYRYDIADFCGVYAQSLVYGLLLTRLTESTEFDETKLDYLSEMPYEYRLLYEFLNTDCGESKYLPGIVVVALKNIAKT
SIO_010081: H0I88_RS02530
subclass of: SO_0000673
so part of: H0I88_RS02530
location: 528253..528567
location: region:528253-528567:1
so has part: feature:528253-528567:1:exon

WP_095558763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528253-528567:1:exon

H0I88_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02535
old locus tag: TGRD_RS02455
so part of: sequence
location: 528570..528875
location: region:528570-528875:1
so has part: feature:528570-528875:1:exon
subclass of: SO_0000010

position:528570:1
position: 528570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528875:1
position: 528875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528570-528875:1:exon

H0I88_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02535
old locus tag: TGRD_RS02455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINIAEINHEFEKEGKGESGIAVYLYEDFLKEYDKLKGTEERKESGVYLIKTKFNKSYGCLDKDVKVLDFACGTGTFINSVYELMLCKSQSPLERQSVKKR
SIO_010081: H0I88_RS02535
subclass of: SO_0000673
so part of: H0I88_RS02535
location: 528570..528875
location: region:528570-528875:1
so has part: feature:528570-528875:1:exon

WP_095558764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528570-528875:1:exon

H0I88_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02540
old locus tag: TGRD_RS05940
so part of: sequence
location: 529005..529175
location: region:529005-529175:1
so has part: feature:529005-529175:1:exon
subclass of: SO_0000010

position:529005:1
position: 529005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529175:1
position: 529175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529005-529175:1:exon

H0I88_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02540
old locus tag: TGRD_RS05940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDLSSHLINELLPNLLQEHKNALKVKIEKDVLAIIGSPPYFSGKSRAEKGKLIRF
SIO_010081: H0I88_RS02540
subclass of: SO_0000673
so part of: H0I88_RS02540
location: 529005..529175
location: region:529005-529175:1
so has part: feature:529005-529175:1:exon

WP_158302796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529005-529175:1:exon

H0I88_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02545
old locus tag: TGRD_RS02460
so part of: sequence
location: 529238..529840
location: region:529238-529840:1
so has part: feature:529238-529840:1:exon
subclass of: SO_0000010

position:529238:1
position: 529238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529840:1
position: 529840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529238-529840:1:exon

H0I88_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02545
old locus tag: TGRD_RS02460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFAQWKIVEHGWGVVGIITNNSWLNGITHRQMRKSLMETFDEIYILNLHGNTRKGENDKNIFDIMVGVSINIFIKHPRFPSKYCNREFSAEKVFYYSVLADNIVTRNEKLNLLETKTLSSLKWKKLNPQETENYFFIPQDLKEENIYNSFFKIINILYNYNSGVGMGNYKIVIHYREKDLLDLKKNFSILNDENLRKKI
SIO_010081: H0I88_RS02545
subclass of: SO_0000673
so part of: H0I88_RS02545
location: 529238..529840
location: region:529238-529840:1
so has part: feature:529238-529840:1:exon

WP_095558765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529238-529840:1:exon

H0I88_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02550
old locus tag: TGRD_RS02465
so part of: sequence
location: 529842..530411
location: region:529842-530411:1
so has part: feature:529842-530411:1:exon
subclass of: SO_0000010

position:529842:1
position: 529842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530411:1
position: 530411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529842-530411:1:exon

H0I88_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02550
old locus tag: TGRD_RS02465
inference: COORDINATES: protein motif:HMM:NF037202.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type ISP restriction/modification enzyme
translation: MTDKTNWKLKEAREDLIKNYNQRLIQYRIFDFRFSSLSKKSNAFMGRPRYRTMEHFDGKNNIGLCFTRVFNANTDIYNRIFISRNIIDHHLHSDAVYIVPLFIYKYNMLQETETPTPNFTKKFYKEYLDTLSFKPAPEYILNYIYAVLHCPKYRKTYIEFLKTGFPSVPMTKNKWYGKEETNVFEEEVS
SIO_010081: H0I88_RS02550
subclass of: SO_0000673
so part of: H0I88_RS02550
location: 529842..530411
location: region:529842-530411:1
so has part: feature:529842-530411:1:exon

WP_158302864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529842-530411:1:exon

H0I88_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02555
old locus tag: TGRD_347
old locus tag: TGRD_351
old locus tag: TGRD_RS02470
so part of: sequence
location: 530425..531189
location: region:530425-531189:1
so has part: feature:530425-531189:1:exon
subclass of: SO_0000010

position:530425:1
position: 530425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531189:1
position: 531189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530425-531189:1:exon

H0I88_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02555
old locus tag: TGRD_347
old locus tag: TGRD_351
old locus tag: TGRD_RS02470
inference: COORDINATES: protein motif:HMM:TIGR00010.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MIIDTHAHMSDSRFDNDREIVIQKAFDCGIEKIFEIACEMRYWDRALELSKRDNIFLSVGVHPIETTKATREDYYKLQVLIQDKKCIAIGEIGLDYHYDSSLQNTNTQKESFFKQIDIAVKYNKAVIIHCRDAYDEMIDFFKKYKNVPKGVIHCFSGTPKQAKMFIEMGFLLGINGPVTYKKSDNLKQVVFETDLNKLLVETDCPYLAPQKYRGQRNEPSYIAETLKEIATIKNILINEVVQITTQNALKLFGI
SIO_010081: H0I88_RS02555
subclass of: SO_0000673
so part of: H0I88_RS02555
location: 530425..531189
location: region:530425-531189:1
so has part: feature:530425-531189:1:exon

WP_015423361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530425-531189:1:exon

H0I88_RS06215
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06215
so part of: sequence
location: 531226..531393
location: region:531226-531393:1
so has part: feature:531226-531393:1:exon
subclass of: SO_0000010

position:531226:1
position: 531226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531393:1
position: 531393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531226-531393:1:exon

H0I88_RS06215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFDSEVSFERAYGKRQISKTKSGKRHSINFSCRIICLPAGIRVMQFFILTKIKH
SIO_010081: H0I88_RS06215
subclass of: SO_0000673
so part of: H0I88_RS06215
location: 531226..531393
location: region:531226-531393:1
so has part: feature:531226-531393:1:exon

WP_232501244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531226-531393:1:exon

H0I88_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02565
old locus tag: TGRD_348
old locus tag: TGRD_352
old locus tag: TGRD_RS02480
so part of: sequence
location: 531436..532047
location: region:531436-532047:1
so has part: feature:531436-532047:1:exon
subclass of: SO_0000010

position:531436:1
position: 531436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532047:1
position: 532047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531436-532047:1:exon

H0I88_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02565
old locus tag: TGRD_348
old locus tag: TGRD_352
old locus tag: TGRD_RS02480
inference: COORDINATES: protein motif:HMM:TIGR04038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family nuclease-associated radical SAM protein
translation: MEFIMNTVSYVFGDNLYLNITNRCMMACPYCIKHKWANKFKGNDLKLEKEPSCEEVIEAIGDPKKYNEVIFCGYGDSLINLESVKEISKWIKENSGKVRINTAGLANRYYGKNILPELKGLVEVISISLNGSNPKEHNELNHPMFKEESFNEIIKFAEEAKNHIPEVVITAVEFPGFDISKVEKIAKEVCVRFKMRPYLNNEY
SIO_010081: H0I88_RS02565
subclass of: SO_0000673
so part of: H0I88_RS02565
location: 531436..532047
location: region:531436-532047:1
so has part: feature:531436-532047:1:exon

WP_015423362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531436-532047:1:exon

H0I88_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02570
old locus tag: TGRD_349
old locus tag: TGRD_353
old locus tag: TGRD_RS02485
so part of: sequence
location: 532037..532870
location: region:532037-532870:1
so has part: feature:532037-532870:1:exon
subclass of: SO_0000010

position:532037:1
position: 532037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532870:1
position: 532870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532037-532870:1:exon

H0I88_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02570
old locus tag: TGRD_349
old locus tag: TGRD_353
old locus tag: TGRD_RS02485
inference: COORDINATES: protein motif:HMM:NF018437.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3D domain-containing protein
translation: MNIRFFVNILKLSFIALGILVLASIFSAITLMFTRAYINTGEKTYTVKPYKNISLKTVLDKNGIFLNDDDIVSHDISKPIKPLQTVKIIHVTKEQKKIIENTPFKVTWSRKYNSNLRKVELQKGKEKNIIKTINKISYNGILYNTNVVNEQTMEREYSRLVLFKANNAIEKVYDLSKAKKIKMVATAYYPGDPLAWKDGTITFLGQKMQRGIVAVDPNVIPLKTRLFIPGYGYGYAGDKGSLIRGKRIDLGVNNAKEEKSWRFKDVNVYILEKSDKY
SIO_010081: H0I88_RS02570
subclass of: SO_0000673
so part of: H0I88_RS02570
location: 532037..532870
location: region:532037-532870:1
so has part: feature:532037-532870:1:exon

WP_015423363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532037-532870:1:exon

H0I88_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02575
old locus tag: TGRD_RS02490
old locus tag: TGRD_tRNA24
so part of: sequence
location: complement(533054..533139)
location: region:533054-533139:-1
so has part: feature:533054-533139:-1:exon
subclass of: SO_0000663

position:533054:-1
position: 533054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533139:-1
position: 533139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533054-533139:-1:exon

H0I88_RS02575
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1408204
locus tag: H0I88_RS02575
old locus tag: TGRD_RS02490
old locus tag: TGRD_tRNA24
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(533103..533105),aa:Leu,seq:caa)
SIO_010081: H0I88_RS02575
subclass of: SO_0000673
so part of: H0I88_RS02575
location: complement(533054..533139)
location: region:533054-533139:-1
so has part: feature:533054-533139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533054-533139:-1:exon

H0I88_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02580
old locus tag: TGRD_350
old locus tag: TGRD_354
old locus tag: TGRD_RS02495
so part of: sequence
location: complement(533294..533749)
location: region:533294-533749:-1
so has part: feature:533294-533749:-1:exon
subclass of: SO_0000010

position:533294:-1
position: 533294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533749:-1
position: 533749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533294-533749:-1:exon

H0I88_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02580
old locus tag: TGRD_350
old locus tag: TGRD_354
old locus tag: TGRD_RS02495
inference: COORDINATES: protein motif:HMM:NF005840.0
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
GO process: GO:0006526 - arginine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyltransferase
translation: MNIRPARVMDVKEIHKLVEYHANNKEMLHRSLSAIYENIQEFVVLESEDNIVGCGALHVSWENLAEIKALAVSDKYKGQGFGRKIVKILQDNAKNLGVSRVFALSFKPKFFIKLGYEIIPKETLPHKIWSECINCHLFSECGEVPLLITLK
SIO_010081: H0I88_RS02580
subclass of: SO_0000673
so part of: H0I88_RS02580
location: complement(533294..533749)
location: region:533294-533749:-1
so has part: feature:533294-533749:-1:exon

WP_015423364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533294-533749:-1:exon

H0I88_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02585
old locus tag: TGRD_351
old locus tag: TGRD_355
old locus tag: TGRD_RS02500
so part of: sequence
location: complement(533897..534469)
location: region:533897-534469:-1
so has part: feature:533897-534469:-1:exon
subclass of: SO_0000010

position:533897:-1
position: 533897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534469:-1
position: 534469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533897-534469:-1:exon

H0I88_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02585
old locus tag: TGRD_351
old locus tag: TGRD_355
old locus tag: TGRD_RS02500
inference: COORDINATES: protein motif:HMM:NF013707.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoacid:acceptor oxidoreductase family protein
translation: MQNEIVIAGFGGQGVLLAGTLIAQAAIEQGLHTTWFPSYGAEMRGGTANSTVVVSSDEIGSPLAFNPDTLIALNEPSLNKFISRVIDNAIVIANSSIIPQNMEYKVKPYFIPVTDIADKEIKNLRTANTVAVGTLIRILELHRFNIQQNTDEKGITLKSVLSACEKIFASKPQLIETNKKAIQAGYDFIK
SIO_010081: H0I88_RS02585
subclass of: SO_0000673
so part of: H0I88_RS02585
location: complement(533897..534469)
location: region:533897-534469:-1
so has part: feature:533897-534469:-1:exon

WP_015423365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533897-534469:-1:exon

H0I88_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: hrcA
locus tag: H0I88_RS02590
old locus tag: TGRD_352
old locus tag: TGRD_356
old locus tag: TGRD_RS02505
so part of: sequence
location: 534657..535694
location: region:534657-535694:1
so has part: feature:534657-535694:1:exon
subclass of: SO_0000010

position:534657:1
position: 534657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535694:1
position: 535694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534657-535694:1:exon

H0I88_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: hrcA
locus tag: H0I88_RS02590
old locus tag: TGRD_352
old locus tag: TGRD_356
old locus tag: TGRD_RS02505
inference: COORDINATES: protein motif:HMM:TIGR00331.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heat-inducible transcriptional repressor HrcA
translation: MRHTALEVLKERKTKILNAVIHHYIRIGKPVGSDVLTKEYNISLSPATVRNLMAELEEDGYLTHPHTSSGRIPTDKGYRSYVDSLVKLQSYAIEEEERIKREYEGKHNEIEDILSETSRILSGLSQYTGFVMTPKAQYDKIKNIELVQISEEELLVILLTQSGMVKHKKVKAYLAYVQLGKLRIFLNEKLRGISIAQVNRKIISEIKDFRRNESEILKIAEKISYVFYNIQDDIYIDGTSNVVAASDFSDFEPVKLLIKFNEDKEKFIEIINKDFNNGGINVKIGSENTLDGLKDLSMITTTYKNRERAVGVLGIIGPKRMEYEKMMLLVNRISEMLNRFFKEMS
SIO_010081: H0I88_RS02590
subclass of: SO_0000673
so part of: H0I88_RS02590
location: 534657..535694
location: region:534657-535694:1
so has part: feature:534657-535694:1:exon

WP_015423366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534657-535694:1:exon

H0I88_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02595
old locus tag: TGRD_353
old locus tag: TGRD_357
old locus tag: TGRD_RS02510
so part of: sequence
location: 535770..536342
location: region:535770-536342:1
so has part: feature:535770-536342:1:exon
subclass of: SO_0000010

position:535770:1
position: 535770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536342:1
position: 536342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535770-536342:1:exon

H0I88_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02595
old locus tag: TGRD_353
old locus tag: TGRD_357
old locus tag: TGRD_RS02510
inference: COORDINATES: protein motif:HMM:NF013212.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MENKKQRILIEQEIHDCNYNKARDEKICELEILKQSIEEKKKQAQDYYDQLLRLKADFENYIRRSEKEKKDYLEWGKEKILLKQISIDDVLRQALKSAKLGNNIESIVLGLEMISKEFSKMLKEEGVKEIECDKFDPNICEALEYIGSEEEDGKILEVYQKGYKMNEKLIRAAKVKVAKNNKENIVGNEK
SIO_010081: H0I88_RS02595
subclass of: SO_0000673
so part of: H0I88_RS02595
location: 535770..536342
location: region:535770-536342:1
so has part: feature:535770-536342:1:exon

WP_015423367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535770-536342:1:exon

H0I88_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaK
locus tag: H0I88_RS02600
old locus tag: TGRD_354
old locus tag: TGRD_358
old locus tag: TGRD_RS02515
so part of: sequence
location: 536450..538315
location: region:536450-538315:1
so has part: feature:536450-538315:1:exon
subclass of: SO_0000010

position:536450:1
position: 536450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538315:1
position: 538315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536450-538315:1:exon

H0I88_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaK
locus tag: H0I88_RS02600
old locus tag: TGRD_354
old locus tag: TGRD_358
old locus tag: TGRD_RS02515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292151.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MAKIIGIDLGTSNSAAAVMEGGKTTLIPSAEGTTLGGKAFPSYVAFTKDGQLLVGEPARRQAVTNPEGTINAFKRKMGTNYKYKVNGKEFTPQQLSAFILQKIKKDSEAYLGETITKAVITVPAYFNDDQRQATKDAGAIAGLEVVRLVNEPTAASLAYGIDKVGKEQKILVFDLGGGTLDVTIMEMGAEGTFEVLSTSGDTQLGGTDMDNALIDYIAEDFKKTNGIDLRNDKMAVQRLKEAAEKAKIELSNVLETDINLPFITADASGPKHLAMKFTRATLENLVRHIVERCKASIDQAVKDAKLTAETVTKIILVGGPTRMPIVQKFAEDHVGKKAERGIDPMECVCFGAAVQAAVLTGDVKDILLLDVTPLTLGLETMGGVRTSLIDRNTTVPAKRSQVFSTAADNQPSVEINVLQGERAMAKDNLSLGRFMLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQSIKISSSTKLSKDDIDKYVKEAEQYASEDVKRKEEIEVRNEADNLIYSVEKSLKDHGDKVSADERLIIEQSLTAAKDALKGSDVATIKSAKEALTTASHKLAEVVYKASQVQDTQGAAQGQSQGNPQQTADNRGKVVDAEIVDENKE
SIO_010081: H0I88_RS02600
subclass of: SO_0000673
so part of: H0I88_RS02600
location: 536450..538315
location: region:536450-538315:1
so has part: feature:536450-538315:1:exon

WP_015423368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536450-538315:1:exon

H0I88_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaJ
locus tag: H0I88_RS02605
old locus tag: TGRD_355
old locus tag: TGRD_359
old locus tag: TGRD_RS02520
so part of: sequence
location: 539075..540226
location: region:539075-540226:1
so has part: feature:539075-540226:1:exon
subclass of: SO_0000010

position:539075:1
position: 539075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540226:1
position: 540226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539075-540226:1:exon

H0I88_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaJ
locus tag: H0I88_RS02605
old locus tag: TGRD_355
old locus tag: TGRD_359
old locus tag: TGRD_RS02520
EC number: 1.8.4.-
inference: COORDINATES: protein motif:HMM:NF008035.0
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MKRDYYEVLEVSKTASVDEIKSAYRKLALKYHPDKNQGDKEAEEKFKEINEAYEMLSDVQKRQQYDTFGHDAAGGMPDGRNPFGGKGSYTQYSGDFSSVGDIFGDIFGDIFSGGSSRAKNRASQRRGEDLRYDVEVSYLDAMKGTKISIDIPKKEICFVCRGTGSKDGSVPKQCPQCKGKGQVKYSQGFFSFSQECSQCKGNGIIINNPCPECRGEGTANKRKPIKVRVPAGVDEGTSLKIAGSGNAGSNGSLSGDLYVIVHMKQTAGFERNGDDLYTEISVSFSQAAMGIEYEVPVIEGHIKVKIPPSTQPGTILRVRKQGFPKLGRKNKGDLYVKINISVPKSMNDEQKLALFEYAKSMGEVPKDSKYQSDNFFSKIFGNK
SIO_010081: H0I88_RS02605
subclass of: SO_0000673
so part of: H0I88_RS02605
location: 539075..540226
location: region:539075-540226:1
so has part: feature:539075-540226:1:exon

WP_015423369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539075-540226:1:exon

H0I88_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsF
locus tag: H0I88_RS02610
old locus tag: TGRD_356
old locus tag: TGRD_360
old locus tag: TGRD_RS02525
so part of: sequence
location: 540661..541023
location: region:540661-541023:1
so has part: feature:540661-541023:1:exon
subclass of: SO_0000010

position:540661:1
position: 540661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541023:1
position: 541023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540661-541023:1:exon

H0I88_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsF
locus tag: H0I88_RS02610
old locus tag: TGRD_356
old locus tag: TGRD_360
old locus tag: TGRD_RS02525
inference: COORDINATES: protein motif:HMM:TIGR00166.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MNYESIFIISPEVPAEKIEELTTKAVKIIEDSKGTFKMSQQFGKKRFAYPINKLREGSYVYTEFSGNGETVNALESFFKFNDLIVRFLTVKIEKKKVVAKKTAKSEPQAAKTTNDKGEIK
SIO_010081: H0I88_RS02610
subclass of: SO_0000673
so part of: H0I88_RS02610
location: 540661..541023
location: region:540661-541023:1
so has part: feature:540661-541023:1:exon

WP_015423370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540661-541023:1:exon

H0I88_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02615
old locus tag: TGRD_357
old locus tag: TGRD_361
old locus tag: TGRD_RS02530
so part of: sequence
location: 541020..541487
location: region:541020-541487:1
so has part: feature:541020-541487:1:exon
subclass of: SO_0000010

position:541020:1
position: 541020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541487:1
position: 541487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541020-541487:1:exon

H0I88_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02615
old locus tag: TGRD_357
old locus tag: TGRD_361
old locus tag: TGRD_RS02530
inference: COORDINATES: protein motif:HMM:TIGR00621.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSQEQNSFRLPEQNSVIIVGRLTRDPELRRTVTGKAICSFDIAISGRMKDPVTGDWKDAEPTFVPIIVWNNQAERCGERLKKGLPVYVEGRLKTNKWEGKDGIKRSRLEVVASRVQFLFTIKQESSAIDAKPIDSINELQEQSDNTVDDDENIPF
SIO_010081: H0I88_RS02615
subclass of: SO_0000673
so part of: H0I88_RS02615
location: 541020..541487
location: region:541020-541487:1
so has part: feature:541020-541487:1:exon

WP_015423371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541020-541487:1:exon

H0I88_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsR
locus tag: H0I88_RS02620
old locus tag: TGRD_358
old locus tag: TGRD_362
old locus tag: TGRD_RS02535
so part of: sequence
location: 541605..541808
location: region:541605-541808:1
so has part: feature:541605-541808:1:exon
subclass of: SO_0000010

position:541605:1
position: 541605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541808:1
position: 541808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541605-541808:1:exon

H0I88_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsR
locus tag: H0I88_RS02620
old locus tag: TGRD_358
old locus tag: TGRD_362
old locus tag: TGRD_RS02535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MRKKVCRFCADKVEIDYKNLSLLHTFVTEKGKILSGRMTGTCAKHQRELDTAIKRARMIALLPFTVN
SIO_010081: H0I88_RS02620
subclass of: SO_0000673
so part of: H0I88_RS02620
location: 541605..541808
location: region:541605-541808:1
so has part: feature:541605-541808:1:exon

WP_231941973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541605-541808:1:exon

H0I88_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rplI
locus tag: H0I88_RS02625
old locus tag: TGRD_359
old locus tag: TGRD_363
old locus tag: TGRD_RS02540
so part of: sequence
location: 541848..542297
location: region:541848-542297:1
so has part: feature:541848-542297:1:exon
subclass of: SO_0000010

position:541848:1
position: 541848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542297:1
position: 542297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541848-542297:1:exon

H0I88_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rplI
locus tag: H0I88_RS02625
old locus tag: TGRD_359
old locus tag: TGRD_363
old locus tag: TGRD_RS02540
inference: COORDINATES: protein motif:HMM:TIGR00158.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MKVILKSDIANVGRQGEIKEVSAGFARNYLIPQSLVMEANDLNLKIWKRERGILEKHREEIINSAREIAFKMEASKFTAKVKIGENGKIFGSITTATLVKIFEDNGFKVNKRDIILSDNIKEIGDHEISVRFHPEVVAKIKLSVINEKE
SIO_010081: H0I88_RS02625
subclass of: SO_0000673
so part of: H0I88_RS02625
location: 541848..542297
location: region:541848-542297:1
so has part: feature:541848-542297:1:exon

WP_015423373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541848-542297:1:exon

H0I88_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: dnaB
locus tag: H0I88_RS02630
old locus tag: TGRD_360
old locus tag: TGRD_364
old locus tag: TGRD_RS02545
so part of: sequence
location: 542327..543697
location: region:542327-543697:1
so has part: feature:542327-543697:1:exon
subclass of: SO_0000010

position:542327:1
position: 542327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543697:1
position: 543697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542327-543697:1:exon

H0I88_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: dnaB
locus tag: H0I88_RS02630
old locus tag: TGRD_360
old locus tag: TGRD_364
old locus tag: TGRD_RS02545
EC number: 3.6.4.12
inference: COORDINATES: protein motif:HMM:NF004384.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MANIIEKVSPQAVDVEMSVLGAMLIEKEAILKVMDIINENDFYKEIHRQIFLVINDLYIGNHPVDLLIVSEALKKNAMFSKVGGTRYLTELIDSVHTAANAEHYASIIRDKSISRQLINIGSAMISNAFNEQNTPDEILDKFQAALFNVSQQKGRKGFSSVSKLVRPMLQKLEKLHSNPKEISGLSTGFADFDSKTTGFHPSELVIIAARPSMGKTAFALNIAEHVAVVKKNPVAIFSLEMKQEALMIRFLASLARVNIGRLRNGQYNSTDWPRLTGAAEKIAGAPIFIDDDSNISVIELRIRARKLATELKTRGERLALIIIDYIQFIHGSGRKFESRQQEVSDISRSLKALAKDLDVPVVVLSQLSRRTEDRGRKDNKPQLSDLRDSGAIEQDADVVAMLYREGYYNREDPDLQRKAILIIGKQRNGPTGDINLIFEGEYTKFSDESKVQDDYQ
SIO_010081: H0I88_RS02630
subclass of: SO_0000673
so part of: H0I88_RS02630
location: 542327..543697
location: region:542327-543697:1
so has part: feature:542327-543697:1:exon

WP_015423374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542327-543697:1:exon

H0I88_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: alr
locus tag: H0I88_RS02635
old locus tag: TGRD_361
old locus tag: TGRD_365
old locus tag: TGRD_RS02550
so part of: sequence
location: 543694..544863
location: region:543694-544863:1
so has part: feature:543694-544863:1:exon
subclass of: SO_0000010

position:543694:1
position: 543694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544863:1
position: 544863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543694-544863:1:exon

H0I88_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: alr
locus tag: H0I88_RS02635
old locus tag: TGRD_361
old locus tag: TGRD_365
old locus tag: TGRD_RS02550
EC number: 5.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00492.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MKKKMPSVVAVTNKTRQTVFFRQNWVEIDRSDFHFNLKKIKEYIAKDTKIMVVIKANAYGHGGVALAKETQRAGVAWIGISSLEEGIQFREAGIKSNILILGNIFPFENFQVAVAHSLTPTISTMSGLAALEYWAVRLNKKINFHLKIDSGMGRIGVVPEASYPILQKIVQMPKTNMTGMYTHFAVADTDPVFTQQQLDIFTNIVKFARINLGLKFIAHAANSAALFRNKRTHLDMVRPGISIYGLTPFKHAERFLKLKSVLSWKTKIIFLKKVPAGFCVSYGRTFVTNRASVIATIPVGYADGYNRLLSNKCDVLVRGKRCPIAGRITMDMTMIDVTDVKGVTLGDEVVLIGVQGKEHIKVDELAKIQNTINYEVTSSISVRVPRIVV
SIO_010081: H0I88_RS02635
subclass of: SO_0000673
so part of: H0I88_RS02635
location: 543694..544863
location: region:543694-544863:1
so has part: feature:543694-544863:1:exon

WP_095558771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543694-544863:1:exon

H0I88_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02640
old locus tag: TGRD_RS02555
so part of: sequence
location: 545031..545255
location: region:545031-545255:1
so has part: feature:545031-545255:1:exon
subclass of: SO_0000010

position:545031:1
position: 545031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545255:1
position: 545255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545031-545255:1:exon

H0I88_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02640
old locus tag: TGRD_RS02555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKKNVIKFIESQFFKIKTGKMLFRSLVLSLEGLGKSVRRGFKTAETIACIFKGDIPVKSTVSQMIEVGWRLLP
SIO_010081: H0I88_RS02640
subclass of: SO_0000673
so part of: H0I88_RS02640
location: 545031..545255
location: region:545031-545255:1
so has part: feature:545031-545255:1:exon

WP_095558772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545031-545255:1:exon

H0I88_RS06220
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS06220
old locus tag: TGRD_pseudo_84
pseudo: true
so part of: sequence
location: 545227..545843
location: region:545227-545843:1
so has part: feature:545227-545843:1:exon
subclass of: SO_0000010

position:545227:1
position: 545227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545843:1
position: 545843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545227-545843:1:exon

H0I88_RS06220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS06220
old locus tag: TGRD_pseudo_84
inference: COORDINATES: protein motif:HMM:NF014460.2
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter permease
SIO_010081: H0I88_RS06220
subclass of: SO_0000673
so part of: H0I88_RS06220
location: 545227..545843
location: region:545227-545843:1
so has part: feature:545227-545843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545227-545843:1:exon

H0I88_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: hemW
locus tag: H0I88_RS02655
old locus tag: TGRD_362
old locus tag: TGRD_366
old locus tag: TGRD_RS02575
so part of: sequence
location: 546686..547813
location: region:546686-547813:1
so has part: feature:546686-547813:1:exon
subclass of: SO_0000010

position:546686:1
position: 546686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547813:1
position: 547813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546686-547813:1:exon

H0I88_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: hemW
locus tag: H0I88_RS02655
old locus tag: TGRD_362
old locus tag: TGRD_366
old locus tag: TGRD_RS02575
inference: COORDINATES: protein motif:HMM:TIGR00539.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM family heme chaperone HemW
translation: MTCLYIHIPFCKQKCLYCSFFSIKYDNVLANRYVDALIEHVGQFKNENILSIYVGGGTPSVLSSEQIQKLLQALSDILNLSTIKEFTFELNPESVSKEKLHILKQLGVNRLSIGLQSVEDKSLKFLGRLHSFKTFCYVYDTARKEGFTNINIDLIYGLPKQTLEDWEQVLKKTLLFNSEHLSLYPFSVEENTPFYKNGIITNDDIQRDIYDESMKILTNNGYNHYEISNWSKKERESFHNTNYWRNLEYIGLGAGASGYLKRRRYKNIENIEKYIELCSSLQVVKGDCFRQYSNLSFLETENEYIDSKLYKTETIMLGLRLLDEGINISCFNNPKHYYILLECLKNKMLNRKGGRIKLAKEYIFVFNQIVLKFME
SIO_010081: H0I88_RS02655
subclass of: SO_0000673
so part of: H0I88_RS02655
location: 546686..547813
location: region:546686-547813:1
so has part: feature:546686-547813:1:exon

WP_015423376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546686-547813:1:exon

H0I88_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: secA
locus tag: H0I88_RS02660
old locus tag: TGRD_363
old locus tag: TGRD_367
old locus tag: TGRD_RS02580
so part of: sequence
location: 548017..550599
location: region:548017-550599:1
so has part: feature:548017-550599:1:exon
subclass of: SO_0000010

position:548017:1
position: 548017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550599:1
position: 550599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548017-550599:1:exon

H0I88_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: secA
locus tag: H0I88_RS02660
old locus tag: TGRD_363
old locus tag: TGRD_367
old locus tag: TGRD_RS02580
inference: COORDINATES: protein motif:HMM:NF009538.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MLKTILVAIFGSQNDRDIKAIQPVIEKINALEPYIKKLTDVELKEKTVEFRERLSKGETLDDVLPEAFACVREASVRTIGLRHFDVQLIGGYILHKGKIAEMKTGEGKTLVATLAAYLNALPQTGVHIVTVNDYLAKRDKEWMGVVYEKLGLTVGNVGNETKNEERRMAYNCDITYITNNEIGFDYLRDNMVIAKDDRVLRPLNYAIIDEVDSILIDEARTPLIISGACAESTDKYYISDRIVPRLKGRIITENEEIKAKYADVDLAKGYDYLIDEKNHSAVLTEQGVQKAEKMLGVKNIYDDLQSEWVHHLTQAIKAHNLYRRDIEYVVKDGKVIIVDEFTGRLMPGRRWSDGLHQSIEVKENLKIADENQTLATITFQNFFRMYKKIAGMTGTATTESEEFWEIYKLGVIEVPTNNPMIRKDYHDVIYRTEREKDNAVVNEIESLWKKGQPVLVGTRSIEKSEKISTMLRIKGIPHQVLNAKYHELEAQIIAGAGTKSAVTIATNMAGRGTDILLGAGDAVQNEEVKKSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSKFFLSMEDELMRLFGSDKMSVIMQKLGLKENEDIQHLWISKAVENAQKKVEGMNFDIRKRLIDFDNVMNKQREAVYKLRNEILEGQDITDTIKDMISESIEEKITAWAVGKYTEEWDWASIDVWLLRTFGIKYETGNKDEISNLSRESARSAISGKVFEAYEHRKEQLTPELMLNMQRIVLLQMIDSSWRDHLYELDQLRHDIGFRAYAQKDPKVEYQKESFALFESMMNRVRDNTIEYIFKVQIDAKLQKMAIQTTNSDFRKNDGKKINKGSNKIGRNDQCPCGSGKKFKKCCGA
SIO_010081: H0I88_RS02660
subclass of: SO_0000673
so part of: H0I88_RS02660
location: 548017..550599
location: region:548017-550599:1
so has part: feature:548017-550599:1:exon

WP_015423377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548017-550599:1:exon

H0I88_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: lnt
locus tag: H0I88_RS02665
old locus tag: TGRD_364
old locus tag: TGRD_368
old locus tag: TGRD_RS02585
so part of: sequence
location: 550756..552303
location: region:550756-552303:1
so has part: feature:550756-552303:1:exon
subclass of: SO_0000010

position:550756:1
position: 550756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552303:1
position: 552303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550756-552303:1:exon

H0I88_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: lnt
locus tag: H0I88_RS02665
old locus tag: TGRD_364
old locus tag: TGRD_368
old locus tag: TGRD_RS02585
inference: COORDINATES: protein motif:HMM:TIGR00546.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MSKLAKFKISMNLKKIILCIITALLAVCSFPKINLFFLAWVAFIPLIFVITRSGLKDSFFYGLISGFVFNAAGLYWLIPMLKFNTGSYVQAVTAACTLWIYLALYWGIWCLYLNFSQNILSNTLKNYLYSNTLIILFGSCIWVLLEYIRTYFLTGFPWMLIGHSQFKFTEIIQIAEFTGVYGVSFLIIFCNLCFYFWISTQKGNKYLYTALVLTVAISIFGAVRAYKFRFFGDQEFTVSIVQPNVDQDKKWDQFYKSDILSNLKEYAFKIAENKTDLIIWPETVLPGSIPEDKQSYESIKYMVKTAGGFNIIGSAYNNDFNAALAFTESDGEYKAVHKKNHLVPFGEYIPFRNLFSRFFGILNQMGDSKKGQDTNVFDNGKIYAGAVICSENFFPDISRNFILSGAKVLTNHTNDAWFFNTAAPHQHFIMNIFRAVENRKAVIVSANSGISGIIEASGVIAEKTASSESIILTGKFLQNNFKTFYTKYGDLFVNMCAGLLLALVLLELCIRIRKI
SIO_010081: H0I88_RS02665
subclass of: SO_0000673
so part of: H0I88_RS02665
location: 550756..552303
location: region:550756-552303:1
so has part: feature:550756-552303:1:exon

WP_015423378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550756-552303:1:exon

H0I88_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: holA
locus tag: H0I88_RS02670
old locus tag: TGRD_365
old locus tag: TGRD_369
old locus tag: TGRD_RS02590
so part of: sequence
location: 552416..553435
location: region:552416-553435:1
so has part: feature:552416-553435:1:exon
subclass of: SO_0000010

position:552416:1
position: 552416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553435:1
position: 553435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552416-553435:1:exon

H0I88_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: holA
locus tag: H0I88_RS02670
old locus tag: TGRD_365
old locus tag: TGRD_369
old locus tag: TGRD_RS02590
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR01128.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta
translation: MNILKMHDFNKLISLQKISSVYLLAGEESYFINMCLNKIEKFTATDDLNRDVFYASESSADDILNALQTLPFLSEIRVVIVKGVNKMKAIDAERLTDYLSNTIETSCLILLYFDNYKKETVAKRREFINKCIASKNCVSVNCRKQYENEVKEFIKNEFAQKGKEVSYDVISRIIEENGNDLLNISNEIEKLSLFAGKNKKDITQEDLEKISGYTKETGIYALSSEIEARDLKKTMFVLEKLLNEREEPVIILSAISSVVRKMLNAKSMIEEQGLSTAEIASALRIHDFYAETFFTNLKKYSTDTLKESLKTILKTDTAIKTGSNDAASALEKTILSICK
SIO_010081: H0I88_RS02670
subclass of: SO_0000673
so part of: H0I88_RS02670
location: 552416..553435
location: region:552416-553435:1
so has part: feature:552416-553435:1:exon

WP_015423379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552416-553435:1:exon

H0I88_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rpsT
locus tag: H0I88_RS02675
old locus tag: TGRD_366
old locus tag: TGRD_370
old locus tag: TGRD_RS02595
so part of: sequence
location: complement(553589..553873)
location: region:553589-553873:-1
so has part: feature:553589-553873:-1:exon
subclass of: SO_0000010

position:553589:-1
position: 553589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553873:-1
position: 553873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553589-553873:-1:exon

H0I88_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rpsT
locus tag: H0I88_RS02675
old locus tag: TGRD_366
old locus tag: TGRD_370
old locus tag: TGRD_RS02595
inference: COORDINATES: protein motif:HMM:TIGR00029.2
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MAKLKTGRHTSTLKEARKTKKRTERNKAIKSKIRTSIKKVEEAVKNNNVKVAQEHLSVVFSEWDKAAKKNIVHYKAASNKKARLSKLVAGIITK
SIO_010081: H0I88_RS02675
subclass of: SO_0000673
so part of: H0I88_RS02675
location: complement(553589..553873)
location: region:553589-553873:-1
so has part: feature:553589-553873:-1:exon

WP_015423380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553589-553873:-1:exon

H0I88_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02680
old locus tag: TGRD_367
old locus tag: TGRD_371
old locus tag: TGRD_RS02600
so part of: sequence
location: complement(553934..554677)
location: region:553934-554677:-1
so has part: feature:553934-554677:-1:exon
subclass of: SO_0000010

position:553934:-1
position: 553934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554677:-1
position: 554677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553934-554677:-1:exon

H0I88_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02680
old locus tag: TGRD_367
old locus tag: TGRD_371
old locus tag: TGRD_RS02600
inference: COORDINATES: protein motif:HMM:NF013094.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HesA/MoeB/ThiF family protein
translation: MQNDIERYQRQLLLKDVGEAGQKKLFNARVLVCGAGGLGSPALTYLAAAGIGYIGLCDFNIVSISNLNRQILYTQAEMGKQKAQIAKEKLEKFNPDVKVRAYSERLTEDTTGDIFKNYDVLIDATDNFPSRYLINTAAYKNSVPLICGAVCEFEGILTTIVPKENTSCFQCIYPFKPSTDLTSKTFGILGAIAGIIGTMQALETVKLILGLHCLKNKILIFNGIENIYRVKEVIKRKNCKACHISVE
SIO_010081: H0I88_RS02680
subclass of: SO_0000673
so part of: H0I88_RS02680
location: complement(553934..554677)
location: region:553934-554677:-1
so has part: feature:553934-554677:-1:exon

WP_015423381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553934-554677:-1:exon

H0I88_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: thiS
locus tag: H0I88_RS02685
old locus tag: TGRD_368
old locus tag: TGRD_372
old locus tag: TGRD_RS02605
so part of: sequence
location: complement(554679..554882)
location: region:554679-554882:-1
so has part: feature:554679-554882:-1:exon
subclass of: SO_0000010

position:554679:-1
position: 554679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554882:-1
position: 554882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554679-554882:-1:exon

H0I88_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: thiS
locus tag: H0I88_RS02685
old locus tag: TGRD_368
old locus tag: TGRD_372
old locus tag: TGRD_RS02605
inference: COORDINATES: protein motif:HMM:TIGR01683.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
translation: MITVKVNGKNKEVKENTSIADFLKSNNIDPIGVTVEHNLEVINPGSIAEIMLKDGDTLEVLRFVGGG
SIO_010081: H0I88_RS02685
subclass of: SO_0000673
so part of: H0I88_RS02685
location: complement(554679..554882)
location: region:554679-554882:-1
so has part: feature:554679-554882:-1:exon

WP_015423382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554679-554882:-1:exon

H0I88_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: thiE
locus tag: H0I88_RS02690
old locus tag: TGRD_369
old locus tag: TGRD_373
old locus tag: TGRD_RS02610
so part of: sequence
location: complement(554869..555504)
location: region:554869-555504:-1
so has part: feature:554869-555504:-1:exon
subclass of: SO_0000010

position:554869:-1
position: 554869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555504:-1
position: 555504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554869-555504:-1:exon

H0I88_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: thiE
locus tag: H0I88_RS02690
old locus tag: TGRD_369
old locus tag: TGRD_373
old locus tag: TGRD_RS02610
EC number: 2.5.1.3
inference: COORDINATES: protein motif:HMM:TIGR00693.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MKKQIPKGLYAITAENFSNGKDNISVVKEMLDAGIKILQYRDKYKTKLEKFKQCEIIRRLTLDYNVFFIINDDIDIALSIQSEGIHLGQDDLPLAKARGIAGPDITIGISTHLPKQALLAAEHGADYIGVGPIYKTFTKDNVVDPVGLGYLDFCVKNINIPKVAIGGIKFSNLLEIYRYNPENICMVTEITASENIEFTVKKVKEAMNDYC
SIO_010081: H0I88_RS02690
subclass of: SO_0000673
so part of: H0I88_RS02690
location: complement(554869..555504)
location: region:554869-555504:-1
so has part: feature:554869-555504:-1:exon

WP_015423383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554869-555504:-1:exon

H0I88_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: thiH
locus tag: H0I88_RS02695
old locus tag: TGRD_370
old locus tag: TGRD_374
old locus tag: TGRD_RS02615
so part of: sequence
location: complement(555501..556607)
location: region:555501-556607:-1
so has part: feature:555501-556607:-1:exon
subclass of: SO_0000010

position:555501:-1
position: 555501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556607:-1
position: 556607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555501-556607:-1:exon

H0I88_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: thiH
locus tag: H0I88_RS02695
old locus tag: TGRD_370
old locus tag: TGRD_374
old locus tag: TGRD_RS02615
inference: COORDINATES: protein motif:HMM:TIGR02351.2
GO function: GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-iminoacetate synthase ThiH
translation: MTFYDIKRQYNTFDFENYTTGVSDKMVESSMQKEILNDMDFLNLLSPKALNHIEEMAQKAHETSIKHFGKGILLYAPLYVSNFCINNCIYCGFSTKNKIKRKVLSFEEIEENCKIVSEYGIRHILLVTGESSVKTPLSYLKKCVEILKNYFDVVDIEIYPLEESGYKELADAGADGLTIYQETYNEELYKLLHTQGAKSDYKYRLDTCKRAGKANYRNLNVGVLLGLNDFVSEIFFAGIHAKYLQKSFSSAEIGMSFPRLRPAVGTYKPKTVISDKNLIQAICAVRLFINRISIAVSTRESKELRSNLIPLGITKMSAGSSTEVGGYAEKRKCSDGQFKINDTATVDEVKKMIYKKDYQPLMKDWTIL
SIO_010081: H0I88_RS02695
subclass of: SO_0000673
so part of: H0I88_RS02695
location: complement(555501..556607)
location: region:555501-556607:-1
so has part: feature:555501-556607:-1:exon

WP_015423384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555501-556607:-1:exon

H0I88_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02700
old locus tag: TGRD_371
old locus tag: TGRD_375
old locus tag: TGRD_RS02620
so part of: sequence
location: complement(556754..557524)
location: region:556754-557524:-1
so has part: feature:556754-557524:-1:exon
subclass of: SO_0000010

position:556754:-1
position: 556754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557524:-1
position: 557524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556754-557524:-1:exon

H0I88_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02700
old locus tag: TGRD_371
old locus tag: TGRD_375
old locus tag: TGRD_RS02620
EC number: 2.8.1.10
inference: COORDINATES: protein motif:HMM:NF017501.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiazole synthase
translation: MNKDFFNIAGIELKSRIFIGSGKFSNNKLIPEIIKSSQAQVMTVAVRRFDFQNPKENILSYIPENIHVMPNTSGARNADEAVRIAHIAKNAAKTDLIKIEIINDNKYLLPDNYQTAKACEILAKEGFKVFAYMNADLYAARDMQNAGVAAVMPLGSPIGTNKGLKTKEMIRILTEEIIAPIIVDAGIGKPSDACECMEMGCAAVMINTSISSSQNPVLMAEAFKDAVNAGRKAFLAKLGAVSDRAKASSPLTDFLN
SIO_010081: H0I88_RS02700
subclass of: SO_0000673
so part of: H0I88_RS02700
location: complement(556754..557524)
location: region:556754-557524:-1
so has part: feature:556754-557524:-1:exon

WP_015423385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556754-557524:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1408204
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: complement(557588..557710)
location: region:557588-557710:-1
so has part: feature:557588-557710:-1:region

position:557588:-1
position: 557588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557710:-1
position: 557710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557588-557710:-1:region

H0I88_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02705
old locus tag: TGRD_372
old locus tag: TGRD_376
old locus tag: TGRD_RS02625
so part of: sequence
location: 558271..559026
location: region:558271-559026:1
so has part: feature:558271-559026:1:exon
subclass of: SO_0000010

position:558271:1
position: 558271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559026:1
position: 559026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558271-559026:1:exon

H0I88_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02705
old locus tag: TGRD_372
old locus tag: TGRD_376
old locus tag: TGRD_RS02625
inference: COORDINATES: protein motif:HMM:NF019339.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MIKIDMKKNLGLIVVCLCFSVCFAENRYKTQIANAEESFKKSNFSKTIEIYESLVQIEKVNNPYIYYNLSNAYYRNGNLGKAILNMEKALRLAPRDREIKNNAEYLNTVAGQVRRKNFPNTFLRYFSLNEITTAFAVITILFLTALSLFIIKRKLILKKAVAVSVVFLIICIPLFALKVYSEVATKEAVVLSASNIKSGPGENNPDIFIIPEGKIVSVIFENGNWNNIKTESKNKSLTGWIEKSALGNINA
SIO_010081: H0I88_RS02705
subclass of: SO_0000673
so part of: H0I88_RS02705
location: 558271..559026
location: region:558271-559026:1
so has part: feature:558271-559026:1:exon

WP_015423386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558271-559026:1:exon

H0I88_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: nadD
locus tag: H0I88_RS02710
old locus tag: TGRD_373
old locus tag: TGRD_377
old locus tag: TGRD_RS02630
so part of: sequence
location: 559019..559600
location: region:559019-559600:1
so has part: feature:559019-559600:1:exon
subclass of: SO_0000010

position:559019:1
position: 559019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559600:1
position: 559600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559019-559600:1:exon

H0I88_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: nadD
locus tag: H0I88_RS02710
old locus tag: TGRD_373
old locus tag: TGRD_377
old locus tag: TGRD_RS02630
inference: COORDINATES: protein motif:HMM:TIGR00482.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate (nicotinamide) nucleotide adenylyltransferase
translation: MHKVAIFGGSFDPVHKSHIQIAKLAFKSLDLKKMIFVIAYTPPHKTKQYAYIEDRISMLKLATGNMQKTEISLYEAQKLETVYSYQTLDYFNSLYPEDEIYMVIGSDSLLDLPIWNNIDYMAGRYKFIVAKRHGFDEVNKNVKYLDRCVFIDKETEDISSTEIRRLVKEDYKKAVSMLNKKVYNYIIQNGLYK
SIO_010081: H0I88_RS02710
subclass of: SO_0000673
so part of: H0I88_RS02710
location: 559019..559600
location: region:559019-559600:1
so has part: feature:559019-559600:1:exon

WP_015423387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559019-559600:1:exon

H0I88_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: yqeK
locus tag: H0I88_RS02715
old locus tag: TGRD_374
old locus tag: TGRD_378
old locus tag: TGRD_RS02635
so part of: sequence
location: 559764..560360
location: region:559764-560360:1
so has part: feature:559764-560360:1:exon
subclass of: SO_0000010

position:559764:1
position: 559764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560360:1
position: 560360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559764-560360:1:exon

H0I88_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: yqeK
locus tag: H0I88_RS02715
old locus tag: TGRD_374
old locus tag: TGRD_378
old locus tag: TGRD_RS02635
EC number: 3.6.1.41
inference: COORDINATES: protein motif:HMM:TIGR00488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
translation: MCKNAEKQIFDYLSENLSPKKLEHSYNVAILAAELASKHNLDIVRVRTAGLLHDCAKFMTDEEFIDFFKKRDKTLKYFKKDVIKFSPHLLHSFAGEIIAKEKFKIKNRDTLNAIKNHTLGRKNMRAIEKIIFIADCVSYDRKLEGAKRIRNLAKNDLNKAFFEVLTKKIEHIIDKGMWLCPQIIDTWNWYVSNNKKDN
SIO_010081: H0I88_RS02715
subclass of: SO_0000673
so part of: H0I88_RS02715
location: 559764..560360
location: region:559764-560360:1
so has part: feature:559764-560360:1:exon

WP_015423388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559764-560360:1:exon

H0I88_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02720
old locus tag: TGRD_375
old locus tag: TGRD_379
old locus tag: TGRD_RS02640
so part of: sequence
location: 560332..561357
location: region:560332-561357:1
so has part: feature:560332-561357:1:exon
subclass of: SO_0000010

position:560332:1
position: 560332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561357:1
position: 561357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560332-561357:1:exon

H0I88_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02720
old locus tag: TGRD_375
old locus tag: TGRD_379
old locus tag: TGRD_RS02640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: LytR C-terminal domain-containing protein
translation: MFQTIKKIIKILLVLITVAVSAYIYIDKNDVVTKKLKGKDYVSFSVLLYGTEKIFPGRLDVYTALYDKRTNTLKVLSVNTDAVVLKKREKARSLKTMFNENSKKDINAAIKKLYLDLYEIIGNAAAADFYINTTFEMFDIAAGRNKKFLKDNFENIDLESLNRLETVEYFMHLPSPAIMKIYKNYGFFDTNIPKLSFMSSALRTKSLKPILMFCEMPVKYTKTRVEFDKQNIEEFLNKIYYAVSVPYTNTKDVLIDIKNASKKPRMAEKAAWLLRKNKLDVLEWSNLYATYDKTLIKDYKGNFMQALIIAEILKTGKVIVSYNNRIFSDIDIFIGKDCIIT
SIO_010081: H0I88_RS02720
subclass of: SO_0000673
so part of: H0I88_RS02720
location: 560332..561357
location: region:560332-561357:1
so has part: feature:560332-561357:1:exon

WP_015423389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560332-561357:1:exon

H0I88_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: rsfS
locus tag: H0I88_RS02725
old locus tag: TGRD_376
old locus tag: TGRD_380
old locus tag: TGRD_RS02645
so part of: sequence
location: 561384..561836
location: region:561384-561836:1
so has part: feature:561384-561836:1:exon
subclass of: SO_0000010

position:561384:1
position: 561384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561836:1
position: 561836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561384-561836:1:exon

H0I88_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
gene: rsfS
locus tag: H0I88_RS02725
old locus tag: TGRD_376
old locus tag: TGRD_380
old locus tag: TGRD_RS02645
inference: COORDINATES: protein motif:HMM:TIGR00090.1
GO function: GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0017148 - negative regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome silencing factor
translation: MAKINFLALAEKAAEIADNKKAIDTIILDIRGVTAIANYFVITTALSTPQINAISIGIEKIFKEQDIKSLRKDGVSSSSWRVIDYGGIVIHVMSTEIRESYKLEKLWKNSKVIESKILKVKSEKQLADIESKSAKTKKELKKLKNQLRMK
SIO_010081: H0I88_RS02725
subclass of: SO_0000673
so part of: H0I88_RS02725
location: 561384..561836
location: region:561384-561836:1
so has part: feature:561384-561836:1:exon

WP_015423390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561384-561836:1:exon

H0I88_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02730
old locus tag: TGRD_RS05950
so part of: sequence
location: 562074..562223
location: region:562074-562223:1
so has part: feature:562074-562223:1:exon
subclass of: SO_0000010

position:562074:1
position: 562074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562223:1
position: 562223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562074-562223:1:exon

H0I88_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02730
old locus tag: TGRD_RS05950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFQEVHQCVIKAKDMKLKESKTKFIKLKEEGYILSKRSDPTGIGYTWEF
SIO_010081: H0I88_RS02730
subclass of: SO_0000673
so part of: H0I88_RS02730
location: 562074..562223
location: region:562074-562223:1
so has part: feature:562074-562223:1:exon

WP_158302798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562074-562223:1:exon

H0I88_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
locus tag: H0I88_RS02735
old locus tag: TGRD_RS05955
so part of: sequence
location: 562330..562476
location: region:562330-562476:1
so has part: feature:562330-562476:1:exon
subclass of: SO_0000010

position:562330:1
position: 562330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562476:1
position: 562476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562330-562476:1:exon

H0I88_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1408204
locus tag: H0I88_RS02735
old locus tag: TGRD_RS05955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPLEAIKKYGSLDTNGRKGLYYTMSLKPNSTGLFLEVTKAAISVRHI
SIO_010081: H0I88_RS02735
subclass of: SO_0000673
so part of: H0I88_RS02735
location: 562330..562476
location: region:562330-562476:1
so has part: feature:562330-562476:1:exon

WP_158302799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562330-562476:1:exon

H0I88_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 1408204
gene: ftsW
locus tag: H0I88_RS02740
old locus tag: TGRD_377
old locus tag: TGRD_381
old locus tag: TGRD_RS02655
so part of: sequence
location: 563537..564646
location: region:563537-564646:1
so has part: feature:563537-564646:1:exon
subclass of: SO_0000010

position:563537:1
position: 563537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564646:1
position: 564646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563537-564646:1:exon