Bradyrhizobium septentrionale strain 1S1 plasmid pBs1S1b, complete sequence.
type: Entry
definition: Bradyrhizobium septentrionale strain 1S1 plasmid pBs1S1b, complete sequence.
sequence version: NZ_CP088287.1
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NZ_CP088287.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN14360499
keyword: RefSeq
source: Bradyrhizobium septentrionale
organism: Bradyrhizobium septentrionale
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
reference: 1
references: 34106824
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP088287.1.\nBacteria and source DNA available from Eden S.P. Bromfield,\nAgriculture and Agri-Food Canada, 960 Carling Ave., Ottawa ON K1A\n0C6.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: NOV-2021\nAssembly Method :: Flye v. v2.9\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 386.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 09:26:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 9,999\nCDSs (total) :: 9,929\nGenes (coding) :: 9,364\nCDSs (with protein) :: 9,364\nGenes (RNA) :: 70\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 63\nncRNAs :: 4\nPseudo Genes (total) :: 566\nCDSs (without protein) :: 565\nPseudo Genes (ambiguous residues) :: 0 of 566\nPseudo Genes (frameshifted) :: 280 of 566\nPseudo Genes (incomplete) :: 386 of 566\nPseudo Genes (internal stop) :: 50 of 566\nPseudo Genes (multiple problems) :: 137 of 566\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 131213
topology: circular
so has quality: SO_0000988
location: 1..131213
location: region:1-131213:1
RO_0002162: 1404411

NZ_CP088287
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN14360499
type: BioSample
SIO_000068: biosample

1
title: Bradyrhizobium septentrionale sp. nov. (sv. septentrionale) and Bradyrhizobium quebecense sp. nov. (sv. septentrionale) associated with legumes native to Canada possess rearranged symbiosis genes and numerous insertion sequences
author: Bromfield, E.S.P.
author: Cloutier, S.
journal: Int J Syst Evol Microbiol 71 (6) (2021)
pubmed: 34106824

34106824
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Bromfield, E.S.P.
author: Cloutier, S.
journal: Submitted (19-NOV-2021) ORDC, Agriculture and Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario K1A 0C6, Canada

3
title: Direct Submission
author: Bromfield, E.S.P.
journal: Submitted (17-SEP-2021) ORDC, Agriculture and Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario K1A 0C6, Canada

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131213:1
position: 131213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-131213:1:source
so part of: sequence
organism: Bradyrhizobium septentrionale
mol type: genomic DNA
strain: 1S1
isolation source: Root nodule from soybean plant inoculated with root zone soil from Amphicarpaea bracteata
host: Glycine max cv. AC Glengarry
type material: type strain of Bradyrhizobium septentrionale
plasmid: pBs1S1b
country: Canada: Gatineau, Quebec
collection date: 2007
note: symbiovar septentrionalis

1404411
type: Taxonomy
SIO_000068: taxonomy

HAP48_RS49265
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49265
old locus tag: HAP48_0049265
so part of: sequence
location: complement(23..436)
location: region:23-436:-1
so has part: feature:23-436:-1:exon
subclass of: SO_0000010

position:23:-1
position: 23
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436:-1
position: 436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23-436:-1:exon

HAP48_RS49265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49265
old locus tag: HAP48_0049265
EC number: 4.1.2.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014439177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxytetrahydropterin synthase
translation: MNKHFSSQRIVSERRSRSDGDDVVLTTRIGRTYRFESAHRLPNLPDGHKCKNLHGHNYRMEVVMQGGLDGRGFVKDFAEMDAEVGPLIKLVDHRLLNDVEGLENPTAEIIASWFFERIPDCESVRIYENDDCWAEVS
SIO_010081: HAP48_RS49265
subclass of: SO_0000673
so part of: HAP48_RS49265
location: complement(23..436)
location: region:23-436:-1
so has part: feature:23-436:-1:exon

WP_166218067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23-436:-1:exon

HAP48_RS49270
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49270
old locus tag: HAP48_0049270
so part of: sequence
location: 1258..2775
location: region:1258-2775:1
so has part: feature:1258-2775:1:exon
subclass of: SO_0000010

position:1258:1
position: 1258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775:1
position: 2775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258-2775:1:exon

HAP48_RS49270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49270
old locus tag: HAP48_0049270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002634692.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkaline phosphatase family protein
translation: MSPPLSHIFVLMLENRSFDHMLGFSGIVGTDAVTGRRRSVNGLTGSEANQYQGRTYPVSHPADSAMAADPGHEFTDTVEQLCGPTATYPPSGSYPPINNSGFVADYAAHVRSNAGAIMKCFSPDQLPVLTKLASTFAVCDSWFASIPGPTFPNRFFACGASSGGLDHSPTSWELFTWETVSGFQLPHGSIFDALGAKFGSGWRIYAGDNLPMATALKNIHHANVTPYASFANDVANANYPWLYTWIEPNYGDVPGGTYKGGNSQHPLDGVTAGEALIKSTYEAIRNSPHWATALLIITWDEHGGFYDHVIPPRAVPPGDTQPGSKYNQFGFTFAQYGVRVPAVVVSPLIPPNVVDGRLYDHATIPATVEAAFGIKPLTARDAAANTVLPLLSLTQPRDCPKRLPTPVPLEAPRVRQLMPRPTDTVNSGNLPGVLLAAARLDQELSPPSEVQAILAKVQSIQTRDDAQRYLDEVNSKAEAEKADEQARFRLLRRKPRKRSTKKNAT
SIO_010081: HAP48_RS49270
subclass of: SO_0000673
so part of: HAP48_RS49270
location: 1258..2775
location: region:1258-2775:1
so has part: feature:1258-2775:1:exon

WP_166218070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1258-2775:1:exon

HAP48_RS49275
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49275
old locus tag: HAP48_0049275
so part of: sequence
location: 2792..4579
location: region:2792-4579:1
so has part: feature:2792-4579:1:exon
subclass of: SO_0000010

position:2792:1
position: 2792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4579:1
position: 4579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2792-4579:1:exon

HAP48_RS49275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49275
old locus tag: HAP48_0049275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRANTKLLISTGSLSILIGLMANPGPVSAAELIDMVASRPCSAIAGDRVGASGNCSASADHKKLAVTLTAKQIDLNKSPGDAGSVSFDLPDGVTFPGSEARRISVDGLMLYNDALAPEVWRVNPGSTLEIKLVNHLSAGETGSTNLHTHGLLVTPDLDTKGAKALEPVGDTVYVCTIPEGESTTSPSAKNCAAHGAYYGNTTSEMNYRIALPSDHPEGLFWYHPHVHMNARTQVGAGLSGLIFVQGATGSASGGARVTSGAQPTERFLMLKDHQIGSVSGGDPATLKASFLPVGDHDAGLCGAGTTVRGTCFADDKGWLFTVNGQVYPHITVKSGEREIWRIANTSADMTYDLALVAKDSGRPLRMQLLARDGIAAAQEGADSAILVERVLMMPSSRIEVAIDRVASEGLFDSGKPLEAVLKTYGYYTGGDAWPAVELASVKFEAAPAAIPTARPRVVPHHVTAGVPSVTKALEPLRVSAWTPSASPNTAAPPARAVKGDARAPGPDPAFGGDHMLHAGGVNEHPLPLPSVEECKPLLPGEERLIVLAIEKPDKDHEWFKIGATRAKRRQTLTKCSAFCRLATPAPEVAVVTSRS
SIO_010081: HAP48_RS49275
subclass of: SO_0000673
so part of: HAP48_RS49275
location: 2792..4579
location: region:2792-4579:1
so has part: feature:2792-4579:1:exon

WP_210293369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2792-4579:1:exon

HAP48_RS49280
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49280
old locus tag: HAP48_0049280
so part of: sequence
location: 4513..5055
location: region:4513-5055:1
so has part: feature:4513-5055:1:exon
subclass of: SO_0000010

position:4513:1
position: 4513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5055:1
position: 5055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4513-5055:1:exon

HAP48_RS49280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49280
old locus tag: HAP48_0049280
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MQRLLPSCDTSTRSGCRDFAVLTMLVRLGLRAGEVAKLQLEHIDWRAGEIVIAHSKGNRTERLPLPADVGEAIAAYLRHGRPASTQGRTVFVRITAPHHALTTGAVTQIVRHAGERCGFEPIHAHRLRHTAATLMLRGGASLPEIGQLLRHRNAITTSIYAKVDRDALRSIARPWPGDVA
SIO_010081: HAP48_RS49280
subclass of: SO_0000673
so part of: HAP48_RS49280
location: 4513..5055
location: region:4513-5055:1
so has part: feature:4513-5055:1:exon

WP_234622386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4513-5055:1:exon

HAP48_RS49285
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49285
old locus tag: HAP48_0049285
so part of: sequence
location: 5052..5975
location: region:5052-5975:1
so has part: feature:5052-5975:1:exon
subclass of: SO_0000010

position:5052:1
position: 5052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5975:1
position: 5975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5052-5975:1:exon

HAP48_RS49285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49285
old locus tag: HAP48_0049285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840754.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNALRKALVDYFAVRRALGFKLYRAEKLLGQFLTFVEDRGEDHLTTKTALAWAALPQGGRTWAFARLSVVRRFANHLRGIDPATEVPPTHLLVQQKGRATPYLYSEADIAALLAAAGTLRTPHRVATFRTLIALLAVTGMRVGEAIGLDRDDFDSVVGLLTIRNAKFAKSRQLPLHPSTVAALVDYLRRDDRPANSSNTPALLVTTVGTRFGYMGVQPVFRQIVEVAGLKPRSASCRPRLHDLRHGFAVNTILDGYRDGREPGNRIALLSTYLGHVDPVSTYWYLSAAPELLTLVGDRLERHLGGAA
SIO_010081: HAP48_RS49285
subclass of: SO_0000673
so part of: HAP48_RS49285
location: 5052..5975
location: region:5052-5975:1
so has part: feature:5052-5975:1:exon

WP_166218073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5052-5975:1:exon

HAP48_RS49290
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49290
old locus tag: HAP48_0049290
so part of: sequence
location: 5972..6961
location: region:5972-6961:1
so has part: feature:5972-6961:1:exon
subclass of: SO_0000010

position:5972:1
position: 5972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6961:1
position: 6961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5972-6961:1:exon

HAP48_RS49290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49290
old locus tag: HAP48_0049290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840753.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTALAPTLQAFFTERLIRQRQASPHTLAAYRDTLRLLLIFASERKDVEPSKLDIDDLDAPLIGAFLDHLEKQRENSARTRNARLAAVRSLFRYAALRHPEHAAIIERVLAIPRKRFDRRIVTFLIEPELDALFRAPDRSTWTGRRDHTLLTLAAQTGLRASELIGLRLSDVHLGTGAHVSCMGKGRKLRITPITSGMVALLRVWLAERAGQPAEPLFVTRSGTSLSRDAVEHRLAKYVQIATRACPSLGQKTISMHVLRHSAAMRLLRAGIETSVIALWLGHEQVETTHIYLHADMGIKERALAATDPAVATPGRFRPNDKLLSFLEAL
SIO_010081: HAP48_RS49290
subclass of: SO_0000673
so part of: HAP48_RS49290
location: 5972..6961
location: region:5972-6961:1
so has part: feature:5972-6961:1:exon

WP_166218076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5972-6961:1:exon

HAP48_RS49295
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49295
old locus tag: HAP48_0049295
so part of: sequence
location: 7054..7767
location: region:7054-7767:1
so has part: feature:7054-7767:1:exon
subclass of: SO_0000010

position:7054:1
position: 7054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7767:1
position: 7767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7767:1:exon

HAP48_RS49295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49295
old locus tag: HAP48_0049295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007606460.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase family protein
translation: MTTNQAAISALFRVVNRYVGNLAPMPGVFPDYKAPIIRTGAEGREVATARWGMPSSSKALMDATKKRAEKLQAKGKAVDFKELLRMEPDSGTTNIRNVKSKHWTRWLGPEHRCVVPFNSFSEFNKAEGGDIWFALDETRPLACFAGIWTNWTSVRKVKEGETVNDLYAFLTTEPNAEVGAIHPKAMPVILTTPDEVETWMTAPADEALKLQRPLPDGALRIVARGVKEDPSNPIVPG
SIO_010081: HAP48_RS49295
subclass of: SO_0000673
so part of: HAP48_RS49295
location: 7054..7767
location: region:7054-7767:1
so has part: feature:7054-7767:1:exon

WP_166218136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7767:1:exon

HAP48_RS49300
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49300
old locus tag: HAP48_0049300
so part of: sequence
location: 7993..9288
location: region:7993-9288:1
so has part: feature:7993-9288:1:exon
subclass of: SO_0000010

position:7993:1
position: 7993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9288:1
position: 9288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7993-9288:1:exon

HAP48_RS49300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49300
old locus tag: HAP48_0049300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPATEQQKWLDEVRRALEFAEENVGADIVATRNALYALWRAMDGAPGTTRDLFRRFDEDTLVADAAGLSTNGLFSGIPLTAANQLQRKELLYALAVRLRCVEDLLHEMMDGVPIRSEAQCLATYEGREGFVLLRQPRHRIAKTRQTFRKRGLRRSSIFPLNIGDYRVKPLFFEDPRARDRMIAQRDLSLGAGLFEGLSFDLGHDAGGFFVKGVTAGNQIDVIRDDLASASNSGCDGVVYPELTVTRETLGEIETRIGGGDWRSDLSFLVPGSLHEEVGGQRFNICSILNGYGGKIGEHRKLFQFTDGANDAESIELGIELPVLILPDATIAFGICLDYCVSGEDPPYEDLDVDYFLVPSCGNGTTMEGHIDRSKKYVDVRKTRTLVVQQFFDERCVGDPPIGYVLCRRDDTRLTVPQTEMRIRWGIYNI
SIO_010081: HAP48_RS49300
subclass of: SO_0000673
so part of: HAP48_RS49300
location: 7993..9288
location: region:7993-9288:1
so has part: feature:7993-9288:1:exon

WP_166218080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7993-9288:1:exon

HAP48_RS49305
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49305
old locus tag: HAP48_0049305
so part of: sequence
location: 9421..11040
location: region:9421-11040:1
so has part: feature:9421-11040:1:exon
subclass of: SO_0000010

position:9421:1
position: 9421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11040:1
position: 11040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421-11040:1:exon

HAP48_RS49305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49305
old locus tag: HAP48_0049305
inference: COORDINATES: protein motif:HMM:NF024854.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix DNA-binding protein
translation: MDRLLDGVSSAQADPDEVFPRLRSCYALLSDKEKNVEVAHEAVYAALRSAVWAFISSGDSGPHLNRWMDLVLRVRQFMRVHRSGISERLTTLSDMLEQSANAADQAGRLKLGKNHLLVLDLLQQRRGEAARADLAKETGLKDSNLSHVLSKLAAFGLIDRIPVGREATIRITDKGRKAISGRQELERQGREDPPAFCDWIPYPMALADMRGSTVRCNEAFARLLQASQDGLEKMPVEILRQSLAARIQDEEFGELTDSDGCARRVIEASEGDRTFWLAVDVDMYRRRIDELEKRESVLAHELTEARSLVAPHAGVSRARDDFARFYADAPQYDFAGMVKQLTPDVMTSVSSIAAASRLLFESKSLKGDERSYCAAIVNNSDHLKNVLGGMIAVADADPFALVVVPFRPHSIASEIVKNFAYSSKAHGYTIATVHSDADHEMMADPYAFKAALQTTIAGVVKVLPRGANVGIKTVTREHGIEVDIVADVVGTSGHILPLNALAQCQAYVSSFGGTFDQVEYRKGSICTKYLWPSERRRIR
SIO_010081: HAP48_RS49305
subclass of: SO_0000673
so part of: HAP48_RS49305
location: 9421..11040
location: region:9421-11040:1
so has part: feature:9421-11040:1:exon

WP_176399286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9421-11040:1:exon

HAP48_RS49310
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49310
old locus tag: HAP48_0049310
so part of: sequence
location: complement(11257..12207)
location: region:11257-12207:-1
so has part: feature:11257-12207:-1:exon
subclass of: SO_0000010

position:11257:-1
position: 11257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12207:-1
position: 12207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11257-12207:-1:exon

HAP48_RS49310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49310
old locus tag: HAP48_0049310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAAVVNCVRLRLGTTESTELSDMVEIRIDLPSGPTNLETTMSEARIRSRSRQAILAAEPRCIYCDGPPQTLEHMPSRGMLRGKERPSGMEYAACSACNNGTRGADAVAALMARIHPDNDVGSWQAEEMRKLVSAVDAHAPGVRDEMSRPDKARSEWLRTTDFGLLKRVVRVHADGPRMNANLSVYGAKLAMALYREHVGSALPLHGRVWCQFAFNGGMTQEHLDARLRIVPVHETLRQGRKNVADQFAYRYNCDARTVVAAVVQFHRGLWFTVFASSDVRIIELFNKPEFVGLPASALVKPGELLNVLRPTIVAA
SIO_010081: HAP48_RS49310
subclass of: SO_0000673
so part of: HAP48_RS49310
location: complement(11257..12207)
location: region:11257-12207:-1
so has part: feature:11257-12207:-1:exon

WP_166218087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11257-12207:-1:exon

HAP48_RS49315
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49315
old locus tag: HAP48_0049315
pseudo: true
so part of: sequence
location: <12230..12470
location: region:12230-12470:1
so has part: feature:12230-12470:1:exon
subclass of: SO_0000010

position:12230:1
position: 12230
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:12470:1
position: 12470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12230-12470:1:exon

HAP48_RS49315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49315
old locus tag: HAP48_0049315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009032021.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SOS response-associated peptidase
SIO_010081: HAP48_RS49315
subclass of: SO_0000673
so part of: HAP48_RS49315
location: <12230..12470
location: region:12230-12470:1
so has part: feature:12230-12470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12230-12470:1:exon

HAP48_RS49320
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49320
old locus tag: HAP48_0049320
so part of: sequence
location: 12533..13126
location: region:12533-13126:1
so has part: feature:12533-13126:1:exon
subclass of: SO_0000010

position:12533:1
position: 12533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13126:1
position: 13126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12533-13126:1:exon

HAP48_RS49320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49320
old locus tag: HAP48_0049320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008137858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFQLIELSQEASGYVHLSTATAWQAWIRKCLPDGLDEDVRLRLISNLKHVLVALEMKAALIVPHAKRGRLLFESYFPMLDFEFCVGTFSVCEGLGSALWLRENGLDGSKAERIGIEQWKASLEKRFDPEKKLGLAADVDSVKGVRDKLHQDKLGARENIDWHAFSYDRAFTPAARAMRSLLRTSADEVPKETNLTAE
SIO_010081: HAP48_RS49320
subclass of: SO_0000673
so part of: HAP48_RS49320
location: 12533..13126
location: region:12533-13126:1
so has part: feature:12533-13126:1:exon

WP_175619906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12533-13126:1:exon

HAP48_RS49325
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49325
old locus tag: HAP48_0049325
so part of: sequence
location: 13130..14911
location: region:13130-14911:1
so has part: feature:13130-14911:1:exon
subclass of: SO_0000010

position:13130:1
position: 13130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14911:1
position: 14911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13130-14911:1:exon

HAP48_RS49325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49325
old locus tag: HAP48_0049325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010511758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRLAKLSIRNFRNFRAIDVPLSGNVVVLGENRVGKSNLLFAIRLILDPTLPDAARQLRLSDFWDGGPPNYDDPIEVHLELADFMGDPALVALLTDFRTPLDPTTVRLSYVFRKKAGVTGVPQTSADFDFVVFGGGDETRAVPGRVRRRVAIDVLDALRDAETQLASWRNSPLRHLLEEAVFAIPSADLGGVAAELDKATKALESFPTIKALEDELRAGILHLSGKAHDIDARLRFAPSDPLRLFRAIAMFIDGGRRGIAEAGLGSANVALLALKLAEFAWRRKKNDRNFSLLCIEEPEAHLHPQLQRSVFKKLFGGVDPTQALIVTSHSPTLAAVTPLRSIIQLRGRNGATEAFSLAALPVGADQLDDLESYLNATRAELLFARGVLFVEGDAEEALVPVFAQSMGRPLDELGITVCNVAGVNFSPYVKLAESLSLPYAVITDWDPLDGSKPPLGRKRTIALWQDMLEVRRQPELTPVQLAEFETKTFAEFAPAAANSGVFLNDRTFEVSIASTPALLHPLLDILDQQGFGSTRTNRIAAWRAGTSAVDPTQLLAMIADIGKGRLGSRLSRKMIGLPPPQYIADAITNVANRV
SIO_010081: HAP48_RS49325
subclass of: SO_0000673
so part of: HAP48_RS49325
location: 13130..14911
location: region:13130-14911:1
so has part: feature:13130-14911:1:exon

WP_166218090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13130-14911:1:exon

HAP48_RS49330
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49330
old locus tag: HAP48_0049330
so part of: sequence
location: 14904..15641
location: region:14904-15641:1
so has part: feature:14904-15641:1:exon
subclass of: SO_0000010

position:14904:1
position: 14904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15641:1
position: 15641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15641:1:exon

HAP48_RS49330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49330
old locus tag: HAP48_0049330
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF024642.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MSDPRRLVGALKELEGNPEQLAAARETGHCVVLAGPGSGKTKTLTTAMARALVEHVVDPRGVACITYSNECVAELEARLSTLGIGPGNRAFIGTVHGFALSQVISPYARCVPVGLPADFKVATRAQSRAAVEAAHAAVIGGAEDPHRRWQFAVEKRRRDVDRSRPEWRGQNPELANFIEAYEAELRNRGLIDYDDMPLLAYRMIKEYGWIGDAIRARFPVLFVDEYQDLARLIRQSAPERLASVV
SIO_010081: HAP48_RS49330
subclass of: SO_0000673
so part of: HAP48_RS49330
location: 14904..15641
location: region:14904-15641:1
so has part: feature:14904-15641:1:exon

WP_166218093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15641:1:exon

HAP48_RS49335
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49335
old locus tag: HAP48_0049335
so part of: sequence
location: 15713..17056
location: region:15713-17056:1
so has part: feature:15713-17056:1:exon
subclass of: SO_0000010

position:15713:1
position: 15713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17056:1
position: 17056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15713-17056:1:exon

HAP48_RS49335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49335
old locus tag: HAP48_0049335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_039183842.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380-like element ISBdi2 family transposase
translation: MTDDTILPFSFPAVHAKKVTAAFDGGRLTSNGGVMLLAMAERRLGLADNLARVFPDRRDPTRVVHSLVDMFRARMFAICCGYEDADDLDHLRSDPAFKLACGRLPDTGRDLCSQPTLSRLENAPRLRDVIRLTYTLVDAWMDSYPREPASVTLDIDDTCDVVHGHQQLSLFNAHYDERCFLPIHVYDTEKSRPVAVVLRPGKTPGGVEVRAHLRRLIRHIRTRWHNTRITFRGDGHYARPEAMAWCETNGIDYIFGLSGTKPLARKLDEAADDIRTRRAIENLPVLRGYTETRHKAKSWDRERRTVARIEATMLGLDIRFVVTSLDVGSAEWIYDSLYCARGQAENLIKLHKTQLASDRTSCRSALANQVRLVLHTAAYWLMLTVRDAIPKARELATAEFATLRLRLLKLAARVVETTSRIRLAFAAACPEADLIRGLPGALLPLGP
SIO_010081: HAP48_RS49335
subclass of: SO_0000673
so part of: HAP48_RS49335
location: 15713..17056
location: region:15713-17056:1
so has part: feature:15713-17056:1:exon

WP_166204320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15713-17056:1:exon

HAP48_RS49340
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49340
old locus tag: HAP48_0049340
so part of: sequence
location: 17281..18312
location: region:17281-18312:1
so has part: feature:17281-18312:1:exon
subclass of: SO_0000010

position:17281:1
position: 17281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18312:1
position: 18312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17281-18312:1:exon

HAP48_RS49340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49340
old locus tag: HAP48_0049340
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF024754.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MFAVGDADQSIYGFNGANPELLASLTERADVRTIRLRFNYRSGKKIIRASLGALGEERDYREIDGAPDGELAFYAVPLGLDQQAQTIATTIIPNILAKGIPPGEIAVLYRAGWHGDKVAEALREADIPFVRADPKGLVRRGSRLACFIEDCARWATGGWRDADPSYSRLLARASALVYGRTASEHEVQELSDRLIVFLNSSIGNRETTHVWLQRCEHELIEPWQAITRNSEQDWDVCSEMVSNTDPANDLDMPLNHFAGRVEGAGRATLTTLHSAKGREFDAVIMYGVNSADLPNNRDKQTPHGLREARRRFYVGVTRPRKSLSLVFQEHHHSPWVYELAQRS
SIO_010081: HAP48_RS49340
subclass of: SO_0000673
so part of: HAP48_RS49340
location: 17281..18312
location: region:17281-18312:1
so has part: feature:17281-18312:1:exon

WP_234622387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17281-18312:1:exon

HAP48_RS49345
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49345
old locus tag: HAP48_0049345
so part of: sequence
location: 18610..18885
location: region:18610-18885:1
so has part: feature:18610-18885:1:exon
subclass of: SO_0000010

position:18610:1
position: 18610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18885:1
position: 18885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18610-18885:1:exon

HAP48_RS49345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49345
old locus tag: HAP48_0049345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFFVHAGVHPDRPLDQQNEHDLLWIRKPFLTSTEDFGRLVVHGHTPTENGVPDQRPNRLNIDTGAVYGRGLTAAVFIDETIRPVKFLTAQ
SIO_010081: HAP48_RS49345
subclass of: SO_0000673
so part of: HAP48_RS49345
location: 18610..18885
location: region:18610-18885:1
so has part: feature:18610-18885:1:exon

WP_166218096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18610-18885:1:exon

HAP48_RS49350
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49350
old locus tag: HAP48_0049350
so part of: sequence
location: complement(18928..22707)
location: region:18928-22707:-1
so has part: feature:18928-22707:-1:exon
subclass of: SO_0000010

position:18928:-1
position: 18928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22707:-1
position: 22707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18928-22707:-1:exon

HAP48_RS49350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49350
old locus tag: HAP48_0049350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003571565.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRILAIRGANLASLAAPFEIDLAAGPLAGSGLFAITGETGAGKSTILDALCLALYGEYPRVSIGRRENAPDPSGEAISIHDGRAILRRGAGGGYAEVDFVGQDGERYRVRWEANRARARANGRLQNEQRALFRLDDGSAVATGKTQVREAVEARTDLTFDQFRRTVLLAQGEFDTFLLAAESERAELLEKITGTEIYAAISVRIHEGTEARRRGVEQLEQSRSDIGLLDDDGRQRRLEEQSQLAEAIAQKVAERDHDIGRLDHFKRVATARSDLNQAEVQAAVAGSAREAAADEYRSLAELDLVEPLRPLSVDLDNARWTAVAAATRLGELLIAREDSRAIDEAAATQLSDATTADGAAEDIFKHFGPLWSEAEKLDAELATARIEFNDATEKSQQAETVLRNHVDALAAIDHTLAQTAEWHRIATAQLKGQSSCALLADRLDDATALLDKRVILKRDGAAAAFGVAEVGRTVASLELEIAELSEKLAVDRDRKEGFTRDIGGRRSSLAAIDEAVLYERDTSLQRVLDAVREASAVCGQHIRASADLARGVSALAAAAQEVSTASGQIAVAESEQLRDRTARAEIEPLADLADEAVSPEAAHLRSMLAPDAACPVCGSTDHPHLLNPSALNDMVAAIRRRRQELDAALDATSLRVSVATRALAAAEVRQSEAKRGIDAARSQVSAAEDVYSGQRSLLRDLCAKAGLVASMPIVPDAQGASELAALAVTASVERTAASVPLADARRLRTEIDDLQREHDVLGVMIESMIRNIEERRSRLHAAQLTFKEHTVRGADIAERLGSIDREIAPFLAAADRTAEQLDADPEGVAACLSTVAHEYDALRKQVGELDLTLQRLAPDRAAAAASLEHAGKQVTESAARLNQRRSVVDEKMLDRTKLLDGEATASHRTRINEFRRTAREALAAAREAKSTTAAAFQAACARCEEAVSALEVATLRRASAEDAFNAACQSVERSSDQVAALISTDQAVCRALRARIKEIDRALIDASAAVLTRQSDLSRALEEFDETTDAEALTAAVAVLTTAIGGLHQRAGALSAVLLRDDEARRAATTLSVEIDTAKAELAIWQSVSDAVGSATGDRFRRFVQGITLDHLIQLANDHLSALSPRYLLARGAASDLTLQISDRDMGDELRATRSLSGGERFLVSLALALALSGLEGRASFVDTLFIDEGFGSLDAETLDMAVDALETLQGRGRKVGVITHVAAMIDRIAVQVRVEKRGAGRSDIRITDGLRDQSERFNG
SIO_010081: HAP48_RS49350
subclass of: SO_0000673
so part of: HAP48_RS49350
location: complement(18928..22707)
location: region:18928-22707:-1
so has part: feature:18928-22707:-1:exon

WP_166218099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18928-22707:-1:exon

HAP48_RS49355
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49355
old locus tag: HAP48_0049355
so part of: sequence
location: complement(22711..23943)
location: region:22711-23943:-1
so has part: feature:22711-23943:-1:exon
subclass of: SO_0000010

position:22711:-1
position: 22711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23943:-1
position: 23943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22711-23943:-1:exon

HAP48_RS49355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49355
old locus tag: HAP48_0049355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012452317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exonuclease SbcCD subunit D
translation: MIRILHTADWHLGQMLRGFSREHEHRRVFEGLEAIVVEHDVDALIIAGDVFENQNPSGEAQRLFYDTLVRLSRARPRMTTVIVAGNHDAAGRLEAPRPLLEAFNIRVVGNVRRPNGRIEASRHCVPITDETGAVAAHVLAVSYPTAACLPNLTRLDGEAGSPIVAGVRSLYSELLDTLRPQMDGLPFIATGHLHVAGGIESEGAERRILVGGQHAVPHDVFPVEASYVALGHLHKAQAVGRDSVRYSGSLIPLSATEQPYHHGVTLVKLDGAQAVSEDIPISRPVPFLRLPEAGDMHLNELGDYLSALDLQPDLAMDERPFVQIRIAREGLSPGFREEIDRIAESFPVRIVDVRVTAMPDELNKAVIADPLIRLADRDPEDVFKLAFERAFGVAPEAAHLEVFHRARAEA
SIO_010081: HAP48_RS49355
subclass of: SO_0000673
so part of: HAP48_RS49355
location: complement(22711..23943)
location: region:22711-23943:-1
so has part: feature:22711-23943:-1:exon

WP_166218102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22711-23943:-1:exon

HAP48_RS49360
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49360
old locus tag: HAP48_0049360
so part of: sequence
location: complement(24102..26606)
location: region:24102-26606:-1
so has part: feature:24102-26606:-1:exon
subclass of: SO_0000010

position:24102:-1
position: 24102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26606:-1
position: 26606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24102-26606:-1:exon

HAP48_RS49360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49360
old locus tag: HAP48_0049360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MADALYFIQTLGLTGFRAFLQPKTFDFSKKRCLAIFAPNGNGKSSVIDALEFMFSKDGTLDRLGLRTINNNAGFVALAHNLAEEAKLAPSVTIGFATGGTVTSGSRSAAGAKRPMPAIVVTVSGCLAVSPIIRGHVLRTFVEAHTPEQRYTDVATWLQLGPLVEVQKNIRALRSQIKAAADDRTAQQRVDGQLAKETANAVTAWDGPEVLVHANTVLLAPLDKVLVLKALDVSDPAYVELTNRAKAEEHQVGLAGLRQIRQAAATLWNEVLDEESGKTVVAGAVPMFETGAADLSKAVKAEVDERGKAASSAFQTLWKAAEPFFTEGGPSPEACPICMTPITETKAGSADGIRAHVAKHLEELADYAAAKSALNSANLAANKAHTLLVAALPGIAGLLGDAEGELKAKLASYRAAVEVWSSGDPPASAAVVAAISALLGKLGTKIADIEAKQGDQTYAKAKVKIDRLLELQAERLLAIRTQEELRSLSEALTAQATTISGEIRKKVQALLDKLQTPMNNIYKVIQGAGAAPIRLELPAEDDTNQQRLNLVIDFAKNRPGVQPGGYLSDSQIHSVALALRLAAIKQFNPSAPIIALDDIVTSYDADHRRTIGSLVAAMFSDCQILVTTHDERFFNYLKDQLEAKDWHFTRIIGLDPAYGPRFADHKVSDEMIETRWAEGQFAANEMRQAEEEWLLGICRDFGVSVRIRPLERAYSYERSELASALASFLRDAKLDPKPIAGINNRFLTSLQKGEIENFGSHFQDGPYGDGSIGDERARWDEFKAFRKQFACPKCERTRFQRPFTLKKPVCAHAGCEAQFEFLAVAPSAPVAKGTV
SIO_010081: HAP48_RS49360
subclass of: SO_0000673
so part of: HAP48_RS49360
location: complement(24102..26606)
location: region:24102-26606:-1
so has part: feature:24102-26606:-1:exon

WP_166218105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24102-26606:-1:exon

HAP48_RS49365
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49365
old locus tag: HAP48_0049365
so part of: sequence
location: complement(26599..26826)
location: region:26599-26826:-1
so has part: feature:26599-26826:-1:exon
subclass of: SO_0000010

position:26599:-1
position: 26599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26826:-1
position: 26826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26599-26826:-1:exon

HAP48_RS49365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49365
old locus tag: HAP48_0049365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEKKEPGQSTAEFLAGLAKHLFEKEGVDVGLADILGAHLLQASPTPDAVAKAKTAIVKLAGNRANPPTAKETNG
SIO_010081: HAP48_RS49365
subclass of: SO_0000673
so part of: HAP48_RS49365
location: complement(26599..26826)
location: region:26599-26826:-1
so has part: feature:26599-26826:-1:exon

WP_166107223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26599-26826:-1:exon

HAP48_RS49370
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49370
old locus tag: HAP48_0049370
pseudo: true
so part of: sequence
location: complement(27007..>27177)
location: region:27007-27177:-1
so has part: feature:27007-27177:-1:exon
subclass of: SO_0000010

position:27007:-1
position: 27007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27177:-1
position: 27177
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27007-27177:-1:exon

HAP48_RS49370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49370
old locus tag: HAP48_0049370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011112984.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 5-methylcytosine-specific restriction system specificity protein McrC
SIO_010081: HAP48_RS49370
subclass of: SO_0000673
so part of: HAP48_RS49370
location: complement(27007..>27177)
location: region:27007-27177:-1
so has part: feature:27007-27177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27007-27177:-1:exon

HAP48_RS49375
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49375
old locus tag: HAP48_0049375
pseudo: true
so part of: sequence
location: complement(<27176..27478)
location: region:27176-27478:-1
so has part: feature:27176-27478:-1:exon
subclass of: SO_0000010

position:27176:-1
position: 27176
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:27478:-1
position: 27478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27176-27478:-1:exon

HAP48_RS49375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49375
old locus tag: HAP48_0049375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004545940.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: HAP48_RS49375
subclass of: SO_0000673
so part of: HAP48_RS49375
location: complement(<27176..27478)
location: region:27176-27478:-1
so has part: feature:27176-27478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27176-27478:-1:exon

HAP48_RS49380
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49380
old locus tag: HAP48_0049380
so part of: sequence
location: complement(27672..29735)
location: region:27672-29735:-1
so has part: feature:27672-29735:-1:exon
subclass of: SO_0000010

position:27672:-1
position: 27672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29735:-1
position: 29735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27672-29735:-1:exon

HAP48_RS49380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49380
old locus tag: HAP48_0049380
inference: COORDINATES: protein motif:HMM:NF024117.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MIEKIRPATGGAEESLDTSRRSRPSLVRFANAVFGAAFPPKGVPADKVVIPNFHRPEPPGFGAALHHWKLDGKNWPSALQALGGRIQSMLASPAATPVINRADGTSRPLKPSDIAILCRQNERCKAVADVLGALGIPAAMPRNGLLDTVEAVLAVAALRYLVDPADSLAVAELAHFNEGNGNWLAVWLTKGAGVVKSQCEAIVALDEKRDNLAHLTPAEALETAIAAARIDQLVHRWDRPGERLANLDALRKVALLYEDACRATRGAATAAGLVAYLSKGLENGGERPAFEGDDAVRVLTYHRAKGLEWPVVILLDLQDGAKRSPFGVYSESPAGGLDPWNPLAGRWIRFWPWPYGDQEKDVHLDATASASPQAQARTEAELAELVRLLYVGMTRARDYLVFATRPSASSSWIDILTRADGTPVLTLPATDGETQVNVDGETFTMVVRSAGLTPAAAVQDEAPAVAWFAPLPLSGEPPKFPPARLSPSAASQDNNDHRAPIADTPIEIGRRLPISGNHDMRLLGEAVHGFLAADRINRPLAEREAMAKEALDRWGVGGALLPASLIEASKRLDRFITDRWPEARRHHELPVFSRIGDQRASGRIDLLLETAEGFVIIDHKSFPGAPDTWVEKAKEFSPQLALYSQMIAQATGSPVLYSFIHMPIVGAVIGIGSNLSPLIQASPTSIF
SIO_010081: HAP48_RS49380
subclass of: SO_0000673
so part of: HAP48_RS49380
location: complement(27672..29735)
location: region:27672-29735:-1
so has part: feature:27672-29735:-1:exon

WP_166218108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27672-29735:-1:exon

HAP48_RS49385
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49385
old locus tag: HAP48_0049385
so part of: sequence
location: complement(29741..30874)
location: region:29741-30874:-1
so has part: feature:29741-30874:-1:exon
subclass of: SO_0000010

position:29741:-1
position: 29741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30874:-1
position: 30874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29741-30874:-1:exon

HAP48_RS49385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49385
old locus tag: HAP48_0049385
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MTDMGPISVVSAGAGTGKTWRLSTEYVNVAQNGASPARIIATTFTIKAAAELVERVRARLIQEGYAEAAQSALAGLVGTVNSVCGRLVSDFAIDGGLSPVAEVIPPEMANSLFGLATEEAIQQFSPKIDPIAERLRQDDWRKTVLDIVNLARGSGLVPTQFADFALKSWQGIEPLLAPVAANETAADLDRALVEAIRSCISQIDAGGDVTKTTKDALTTLRRIASQMSNGRPLAWDAWARISKLKAAKASEPFLQTVRAIAAHHPTHPRLHADLREFIDLVFSCAADALDHFSEFKRARGLLDFTDQEALALELLRQPEVRARMRERFDLLMVDEFQDTSPIQLAVFLEMAKAVKRSLGAAIRSKPSLAFGRPILRS
SIO_010081: HAP48_RS49385
subclass of: SO_0000673
so part of: HAP48_RS49385
location: complement(29741..30874)
location: region:29741-30874:-1
so has part: feature:29741-30874:-1:exon

WP_166218111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29741-30874:-1:exon

HAP48_RS49390
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49390
old locus tag: HAP48_0049390
so part of: sequence
location: complement(30871..32295)
location: region:30871-32295:-1
so has part: feature:30871-32295:-1:exon
subclass of: SO_0000010

position:30871:-1
position: 30871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32295:-1
position: 32295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30871-32295:-1:exon

HAP48_RS49390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49390
old locus tag: HAP48_0049390
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MSHIPAIQLGRIIDAVTAEGASAPAATEEAAPWSVVDAPGQVWGTADTVVWWGFSGDVSSPPRQPWSSAEIAALAAVDAHVEPIEDAVLREAASWRQALLGARSRAILIMPRRLRGETATPHPLWHEIFAQLELLQAVTKARIPAQAIAIGETARLGDREIKRQGISPLALPTARRRWIVPASTIARRPIESITSIKTMIECPLAWALNYGARVRPGALNVLPDDANLVGILAHAVVENLFAQRKTWLPQEAASASAKMFDSLVVQTAAPLLRLGYAVEYERAKARVSDSIRLLVQMISDAGLTVRGCEEEVVVAFAPGQDFEGYLDLVLEDPKGRSVVLDLKWATRDKYRREEVQEGRALQLAGYTWLEEQAGRTPLGAGYFMLRQQSLLFTSPYPFPAAHHVPGSDLKQTWAALRAAYDHRMEQLERGDVLVRGVEAGTDDTDVDPMPQVEPGCRFCDYGSLCGASIEGGRR
SIO_010081: HAP48_RS49390
subclass of: SO_0000673
so part of: HAP48_RS49390
location: complement(30871..32295)
location: region:30871-32295:-1
so has part: feature:30871-32295:-1:exon

WP_166218114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30871-32295:-1:exon

HAP48_RS49395
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49395
old locus tag: HAP48_0049395
so part of: sequence
location: complement(32346..33578)
location: region:32346-33578:-1
so has part: feature:32346-33578:-1:exon
subclass of: SO_0000010

position:32346:-1
position: 32346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33578:-1
position: 33578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32346-33578:-1:exon

HAP48_RS49395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49395
old locus tag: HAP48_0049395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHVVFGWKLDGPCHPQTANGSSAAIGQPVVGPSGFLNLLESALGLVGPNTPAAVRIARYQGRLRSHDDGSRFYSGSFVRDAWATAKHILAWRDELYASGWQGQQIESAGPRLETMASLEMAGSQPLGSCPGERIHAILEVLTNGHDLPVETIDVVSSEERLPLMWRRLLARLRASGITIRALEPSVNTGDSDLVAIQCALRGDKAEKFVGDGSLVILDADDEWQAADAVAAWLSSGDNRETVIVRGNGCPALDAACRRLGLPRPGWTETSPQRSALQVLPLALEILWDPLEPARILEFLSLPRSPLPPFVSRRFVRALMDEPGIGGERWIEAWQDCIRDLTGWRRADGLDDAAIESEIRKAQDEWKFWLEPQRFRRSDGIPVQRVQDVCHRIAQWSGGGGVHNAIETTFS
SIO_010081: HAP48_RS49395
subclass of: SO_0000673
so part of: HAP48_RS49395
location: complement(32346..33578)
location: region:32346-33578:-1
so has part: feature:32346-33578:-1:exon

WP_166218118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32346-33578:-1:exon

HAP48_RS49400
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49400
old locus tag: HAP48_0049400
so part of: sequence
location: 34171..36603
location: region:34171-36603:1
so has part: feature:34171-36603:1:exon
subclass of: SO_0000010

position:34171:1
position: 34171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36603:1
position: 36603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34171-36603:1:exon

HAP48_RS49400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49400
old locus tag: HAP48_0049400
EC number: 5.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674970.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase
translation: MPDQIVITEKTSQAKDVRAAVGSRYGDVLPAEGHLFDLLEPEDVVPVWKCWSPILLRPEGLYDTRPATGGNKAAKLKAIREALRSAKRVWLATDCDREGQLIGQEILEHYKYRGEVMRVLFTAQDPQTIRDAFGRAKPNAEYARLYAAAVARRQADQIYNLSLTRTATVILGRGTRRVIGVGRVKTPTLAIVCKRELEIRDFVPLTYFEVVVTAKVAEGQFQMRHAPQDRIVRHEIAEDAVKAAEGFEGTLAVRVEDKRQGPPKLHDLPSLQKLCGSRFGWSASKTLEVAQELYDGQGKKIITYPRAEVRYLPQSLISDVPRIVAGLQAGQSFSAIPVPVPPVIRRGASGTFYDKGLEGASHHAVIPNVNTIDQLRDVWPRLSADEKKLFDIIARAYLAALMPDFRYRQTTATLDVRGFEFRAAGRQPIDLGWRAAFPEWQPADEKGDDAQLLPPLRNGETAMLQDPKIEAKETRPPPRYNEGTLIEAMQNAWRFVDDEVLRDRLKEAKGIGTPATRAEIIGGLKKQGFLIAQGKHIVPTEAGLSLFGILKQADPALVDPGVTAQLECLLDDVVVGKQEMVGAIDAVCDVAERIIGKLKEGAAAGGPPLLGASVGNGAAAYPPTPAMKRFADSLARQSGIKPPPGYKTSISICGAFLKQHAPKKTDGEATGKLEPKSVSPAQLLYAKKIALGKGVVIPDEAKGNSAAMAAWIDSNKGTRRRKSGRKTAFRPPGSIAPQSTAPRKIARKRKAAAAADASMPAQPNPAAGTPLRIPYGNKEIAMKLGARYGSGGWYAPPGVDLAAFGERGWL
SIO_010081: HAP48_RS49400
subclass of: SO_0000673
so part of: HAP48_RS49400
location: 34171..36603
location: region:34171-36603:1
so has part: feature:34171-36603:1:exon

WP_166107309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34171-36603:1:exon

HAP48_RS49405
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49405
old locus tag: HAP48_0049405
so part of: sequence
location: complement(37073..38464)
location: region:37073-38464:-1
so has part: feature:37073-38464:-1:exon
subclass of: SO_0000010

position:37073:-1
position: 37073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38464:-1
position: 38464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37073-38464:-1:exon

HAP48_RS49405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49405
old locus tag: HAP48_0049405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MRDALIALWEASDRVCGKRLVSMIPVLLPALERHGRLKPTSAERALLTTLSAATIDRMLIDVKIAAAGGRRRRVGFYSAIRREVPIRTFNDWANPPPGFCEIDMVAHGGTSVAGSFIQTLTMVDIATGWTECLPLVTRDGSLVVEAMTRAQGLFPWVICGADFDNDSAFMNDVVVPWCRAQKIEVTRSRAYKKNDQAFVEQKNGAVVRRLVGYGRFDGVETARVMARLYAAARLLVNFFQPSFKLKEKRREGAKIIKRYHPPATPYERALGHPKLPSAVKRRLRQTYRNLDPIQLLATIRTAQEELGERIGKRGLAKVPTVSPADPLSFARSLGTAANTAEVRATHRRPKRRYKKRIRMPSKLDPHLAIIENWLAVEPQLTALAIVGRLATIDPSMFSDKQHSIVQRLLRSLRRKVAETAIVSMPVDEIRPEAVDGAACDEHSAPPTASPPSWPRLETGLGPG
SIO_010081: HAP48_RS49405
subclass of: SO_0000673
so part of: HAP48_RS49405
location: complement(37073..38464)
location: region:37073-38464:-1
so has part: feature:37073-38464:-1:exon

WP_176399285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37073-38464:-1:exon

HAP48_RS49410
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49410
old locus tag: HAP48_0049410
so part of: sequence
location: 39440..40690
location: region:39440-40690:1
so has part: feature:39440-40690:1:exon
subclass of: SO_0000010

position:39440:1
position: 39440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40690:1
position: 40690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39440-40690:1:exon

HAP48_RS49410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49410
old locus tag: HAP48_0049410
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011024495.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MSEAKPYDISKHLVWQAWKQVKANQGAAGVDGVSVAAFEKDLKRNLYKVWNRMSSGTYFPPPVRLVEIPKSDGKSVRKLGIPAVGDRVAQTVAKMVIEKEVEPVFHPDSYGYRPGRSALDAVGKARERCWKFDWVIDLDIKSFFDTIPWDLMEKAVAHHVELGWVRLYVRRWLQATVERKDGTRDERTRGTPQGSVVSPVLSNLFMHYCFDAWMQRTFSHLRFERFADDAIVHCWSEEEAKAVLGAIRNRLAECGLELHPEKTRIVYCKDNNRSGGYEQITFDFLGYTFRPRKARDSKGEKFVSFAPAISRKAAKGIRQAIREWRVTSRSNQTLEDLAKLIDPVARGWLNYYGRFYRSECVNVLRHVNMVLTRWVMGKYKRFKRRKTAAISWLGRLAKRAPSLLYLWKVGIRPTAG
SIO_010081: HAP48_RS49410
subclass of: SO_0000673
so part of: HAP48_RS49410
location: 39440..40690
location: region:39440-40690:1
so has part: feature:39440-40690:1:exon

WP_166208664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39440-40690:1:exon

HAP48_RS49415
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: istB
locus tag: HAP48_RS49415
old locus tag: HAP48_0049415
so part of: sequence
location: complement(40715..41527)
location: region:40715-41527:-1
so has part: feature:40715-41527:-1:exon
subclass of: SO_0000010

position:40715:-1
position: 40715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41527:-1
position: 41527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40715-41527:-1:exon

HAP48_RS49415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: istB
locus tag: HAP48_RS49415
old locus tag: HAP48_0049415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009800157.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MERTQIFDLMGELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLNAEINEKQARSIKYQLTIAKLPLAKDIADFQFDGTPINQTLVNDLAGGGFIAQQRNVVLVGGTGTGKTHLAIAIARSCIRDGARGRFYNVVDLVNRLETETRNGRQGRLAEHLTRMDFIVLDELGYLPFAQSGGQLLFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKSRDDVQTTRARAVSGRVARGNFTPRRSRIRT
SIO_010081: HAP48_RS49415
subclass of: SO_0000673
so part of: HAP48_RS49415
location: complement(40715..41527)
location: region:40715-41527:-1
so has part: feature:40715-41527:-1:exon

WP_176399284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40715-41527:-1:exon

HAP48_RS49420
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: istA
locus tag: HAP48_RS49420
old locus tag: HAP48_0049420
pseudo: true
so part of: sequence
location: complement(41487..43026)
location: region:41487-43026:-1
so has part: feature:41487-43026:-1:exon
subclass of: SO_0000010

position:41487:-1
position: 41487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43026:-1
position: 43026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41487-43026:-1:exon

HAP48_RS49420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: istA
locus tag: HAP48_RS49420
old locus tag: HAP48_0049420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611638.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: HAP48_RS49420
subclass of: SO_0000673
so part of: HAP48_RS49420
location: complement(41487..43026)
location: region:41487-43026:-1
so has part: feature:41487-43026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41487-43026:-1:exon

HAP48_RS49425
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49425
old locus tag: HAP48_0049425
pseudo: true
so part of: sequence
location: <43266..43850
location: region:43266-43850:1
so has part: feature:43266-43850:1:exon
subclass of: SO_0000010

position:43266:1
position: 43266
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:43850:1
position: 43850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43266-43850:1:exon

HAP48_RS49425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49425
old locus tag: HAP48_0049425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011931032.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HAP48_RS49425
subclass of: SO_0000673
so part of: HAP48_RS49425
location: <43266..43850
location: region:43266-43850:1
so has part: feature:43266-43850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43266-43850:1:exon

HAP48_RS49430
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49430
old locus tag: HAP48_0049430
so part of: sequence
location: 43847..44449
location: region:43847-44449:1
so has part: feature:43847-44449:1:exon
subclass of: SO_0000010

position:43847:1
position: 43847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44449:1
position: 44449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43847-44449:1:exon

HAP48_RS49430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49430
old locus tag: HAP48_0049430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011931033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MSLNTTAVRIKVTLKDVKPEVMRRLVVPVTLRLDRLHLTLQEAFGWTNSHLFEFFAGEAHWGIPDPDNDHGDQPMDARKARLCDIVRETGAKTIHYLYDFGDSWDHVIKLEKWFDNTTTEGLPFLLEAAGRCPPEDVGGAPGYAEYLDAISDPAHPEHEHMRRWGPERFDPNVIDRKALEAAVNALSDTWKPRRRATRTK
SIO_010081: HAP48_RS49430
subclass of: SO_0000673
so part of: HAP48_RS49430
location: 43847..44449
location: region:43847-44449:1
so has part: feature:43847-44449:1:exon

WP_166309158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43847-44449:1:exon

HAP48_RS49435
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49435
old locus tag: HAP48_0049435
so part of: sequence
location: complement(44552..46168)
location: region:44552-46168:-1
so has part: feature:44552-46168:-1:exon
subclass of: SO_0000010

position:44552:-1
position: 44552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46168:-1
position: 46168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44552-46168:-1:exon

HAP48_RS49435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49435
old locus tag: HAP48_0049435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase family protein
translation: MAAVARRYRAAGRVEKGRILDELTATTGWHRKHAVRALSVAGRDRPRPPLDEGATSPTEPATSRRRKYASVRDALIALWEASDRVCGKRLVSMIPVLLPALERHGRLKPTSAERALLTTLSAATIDRMLIDVKIAAAGGRRRRVGFYSAIRREVPIRTFNDWANPPPGFCEIDMVAHGGTSVAGSFIQTLTMVDIATGWTECLPLVTRDGSLVVEAMTRAQGLFPWVICGADFDNDSAFMNDVVVPWCRAQKIEVTRSRAYKKNDQAFVEQKNGAVVRRLVGYGRFDGVETARVMARLYAAARLLVNFFQPSFKLKEKRREGAKIIKRYHPPATPYERALGHPKLPSAVKRRLRQTYRTLDPIQLLATIRTAQEELGERIGKRGLAKVPTVSPADPLSFARSLGTAANTAEVRATHRRPKRRYKKRIRMPSKLDPHLAIIENWLAVEPQLTALAIVGRLATIDPSMFSDKQHSIVQRLLRSLRRKVAETAIVSMPVDEIRPEAVDGAACDEHSAPPTASPPSWPRLETETFIPGNITS
SIO_010081: HAP48_RS49435
subclass of: SO_0000673
so part of: HAP48_RS49435
location: complement(44552..46168)
location: region:44552-46168:-1
so has part: feature:44552-46168:-1:exon

WP_234622388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44552-46168:-1:exon

HAP48_RS49440
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49440
old locus tag: HAP48_0049440
so part of: sequence
location: 46513..47274
location: region:46513-47274:1
so has part: feature:46513-47274:1:exon
subclass of: SO_0000010

position:46513:1
position: 46513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47274:1
position: 47274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46513-47274:1:exon

HAP48_RS49440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49440
old locus tag: HAP48_0049440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSFFRVLTPFFGAPKNYQEMLWTIAVADFWLALICTFLLRYDPWIDGVFKRLEELPGLKEFAALAKLPQITSVDLATVSVVNVVIALAVMLFSRTTRFHDLISDLFGIRARFDHANILLPLALTSGAKMNARQVANIKRDRSHLMRDTFYKYASSTKENALVDKHDIDSALEAWTLYWVALEGLVIFATCALVSAIAASTWLLILFWSVSMAFLLFMHFRYAKLERRVEPEVQQIAGNAEANDANRQVFEAN
SIO_010081: HAP48_RS49440
subclass of: SO_0000673
so part of: HAP48_RS49440
location: 46513..47274
location: region:46513-47274:1
so has part: feature:46513-47274:1:exon

WP_176399283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46513-47274:1:exon

HAP48_RS49445
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49445
old locus tag: HAP48_0049445
so part of: sequence
location: 47274..47996
location: region:47274-47996:1
so has part: feature:47274-47996:1:exon
subclass of: SO_0000010

position:47996:1
position: 47996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47274-47996:1:exon

HAP48_RS49445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49445
old locus tag: HAP48_0049445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011509865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MRYKIGRDIVIRSENAAKPEAQSSSYLNKLIARLKPVHSSFDFGCGKLRYERVIAKTTDELALVDSEVQLSRTQMIRGRSTTIRDHVRKSNHVHAYTVNQFASLGRKYDRGFCINVLSVIPSANVRMGIVQLMSTKLKPGCSCLFVSLYRNSDFTRMRKLPNCKPYDNGFLMDSLRGYSFYGLIPPDDLVSLVERGGFEVESVKLDEGSAYLWAKSPDKASEPTQFDILESIENFQIRTS
SIO_010081: HAP48_RS49445
subclass of: SO_0000673
so part of: HAP48_RS49445
location: 47274..47996
location: region:47274-47996:1
so has part: feature:47274-47996:1:exon

WP_166309166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47274-47996:1:exon

HAP48_RS49450
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49450
old locus tag: HAP48_0049450
so part of: sequence
location: 48063..48881
location: region:48063-48881:1
so has part: feature:48063-48881:1:exon
subclass of: SO_0000010

position:48063:1
position: 48063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48881:1
position: 48881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48063-48881:1:exon

HAP48_RS49450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49450
old locus tag: HAP48_0049450
inference: COORDINATES: protein motif:HMM:NF037056.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSQELINKVRSRLPDDFSRRQLGGALVVLTQENNPARANQSASSFRELTAHVLELMAPDADVMRCQWFKQDKNVEGPTRRQRALYTCRGGLTDAFLKDKLGIKPGTLHSGLGPAFQELNKRTHVRPETELKTEEEIEEFAENALVALDDLFETIDEMKDRVATALSRALSGAATDAFINQSISELDEISGKYETGGVLIDDPEILALDADRIRCRFTGSVSVTLMAGGKHDPVDFKESFPFECTTSAPAAAKEDFDFADTTIKVDTSSWRE
SIO_010081: HAP48_RS49450
subclass of: SO_0000673
so part of: HAP48_RS49450
location: 48063..48881
location: region:48063-48881:1
so has part: feature:48063-48881:1:exon

WP_166309169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48063-48881:1:exon

HAP48_RS49455
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49455
old locus tag: HAP48_0049455
so part of: sequence
location: complement(48969..49724)
location: region:48969-49724:-1
so has part: feature:48969-49724:-1:exon
subclass of: SO_0000010

position:48969:-1
position: 48969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49724:-1
position: 49724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48969-49724:-1:exon

HAP48_RS49455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49455
old locus tag: HAP48_0049455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018643590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MTPAERLLVGLGIAEPEDIDLEAIAWTQGAVVNYRPIDNCEATIVGSKKRAVISVNSLSMRQRCRFSLGHELGHWHYDRGKVLFCGKSDVCNFRNDALSPERRADDFASDLILPNFMVLPRLRKMKRLTLAASRELADEFDVSLTATLVKMTALNHFPMVIVCHNKRERVWYKASPMIQQWWRPVRALDDQTFAADMLVRGAAEQNFPRKNPADAWFDFKGSDRYEVEEQSFLLPDEEILTVLTLPRQAIA
SIO_010081: HAP48_RS49455
subclass of: SO_0000673
so part of: HAP48_RS49455
location: complement(48969..49724)
location: region:48969-49724:-1
so has part: feature:48969-49724:-1:exon

WP_166309172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48969-49724:-1:exon

HAP48_RS49460
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49460
old locus tag: HAP48_0049460
so part of: sequence
location: complement(49721..50116)
location: region:49721-50116:-1
so has part: feature:49721-50116:-1:exon
subclass of: SO_0000010

position:49721:-1
position: 49721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50116:-1
position: 50116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49721-50116:-1:exon

HAP48_RS49460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49460
old locus tag: HAP48_0049460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKLDQAIDDSILEASEADLREDFKEAGDDFDKAVSRASRALEQAKARTARMRFKRAQDESKAYREQENVKSFDLAKARRRLDGMRSGEVENAMMAARKGGKLSQRDEENLLKDLAQLEALENDDKEEGEE
SIO_010081: HAP48_RS49460
subclass of: SO_0000673
so part of: HAP48_RS49460
location: complement(49721..50116)
location: region:49721-50116:-1
so has part: feature:49721-50116:-1:exon

WP_166309175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49721-50116:-1:exon

HAP48_RS49465
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49465
old locus tag: HAP48_0049465
so part of: sequence
location: complement(50143..50751)
location: region:50143-50751:-1
so has part: feature:50143-50751:-1:exon
subclass of: SO_0000010

position:50143:-1
position: 50143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50751:-1
position: 50751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50143-50751:-1:exon

HAP48_RS49465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49465
old locus tag: HAP48_0049465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MDHVGVPSPKASASAPEHLTYEEVASALDGLTPLDLARLDAIERRYLGGTDFAEGDLLQEAMCSALFEAKRCPRTTRFMAFLVQSMRNIAGHRRDRLQQQVPIEDGPTGERKSKVELKDSGPSPEDAAIRAEQERRASEICAALNVHYGADEEMSMVLFGWENDMRGEALRDFVGVDQARLDYVIKKIRRIARREYPKGWLL
SIO_010081: HAP48_RS49465
subclass of: SO_0000673
so part of: HAP48_RS49465
location: complement(50143..50751)
location: region:50143-50751:-1
so has part: feature:50143-50751:-1:exon

WP_166309178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50143-50751:-1:exon

HAP48_RS49470
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49470
old locus tag: HAP48_0049470
so part of: sequence
location: 50897..52096
location: region:50897-52096:1
so has part: feature:50897-52096:1:exon
subclass of: SO_0000010

position:50897:1
position: 50897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52096:1
position: 52096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50897-52096:1:exon

HAP48_RS49470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49470
old locus tag: HAP48_0049470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011663911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MNYLSERAQLRQSQLADLIEEACQHLEPSPYQREVAQQRYEGVGDWLAKSQDPLLAEIAIRLQGSVAIGTTVKPIGAAEYDVDLVAHVPDIDAVISPAMLKHRIGDRLRANGHYAPLLVEMPRCWRLDYANEFHLDITPSIPNPGCAMGGELVPDKALKSWKASNPMGYRAKFERRAKLQARIRSAFGRILDSTIAKDSVEPYPEEMKLKGLLRRTVQIAKRHRDLEFIDDTDGLAPLSIIVTTLASRAYEFCVGNFVYDHELDLIVDLLRRMPNSIETRVNGNRVEWYLWNQTTVGENFCEKWNKHPERATAFFEWHAKLVADVEKLAAARGLDDVRRLLGDVVGRAPANAALDALTARVSTARTGNRLSVTKPAGLIVGTAAGATPVRGNTFFGDPR
SIO_010081: HAP48_RS49470
subclass of: SO_0000673
so part of: HAP48_RS49470
location: 50897..52096
location: region:50897-52096:1
so has part: feature:50897-52096:1:exon

WP_176399282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50897-52096:1:exon

HAP48_RS49475
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49475
old locus tag: HAP48_0049475
so part of: sequence
location: 52100..52567
location: region:52100-52567:1
so has part: feature:52100-52567:1:exon
subclass of: SO_0000010

position:52100:1
position: 52100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52567:1
position: 52567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52100-52567:1:exon

HAP48_RS49475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49475
old locus tag: HAP48_0049475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009797621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLGRRKPLTAAQQYVNLRANPLSSGDGVLRAGSFTWRFEASPSPLSRIYRVRIEMAQERSPRTFVETPDLALLADGRDLPHVYRNPTRLCLYLPGSSEWQPWMRIDQTIVPWSVLWLWYFEDWLASGEWKGGGVHPREHDQERSRPPKRRSETQ
SIO_010081: HAP48_RS49475
subclass of: SO_0000673
so part of: HAP48_RS49475
location: 52100..52567
location: region:52100-52567:1
so has part: feature:52100-52567:1:exon

WP_166309184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52100-52567:1:exon

HAP48_RS49480
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49480
old locus tag: HAP48_0049480
so part of: sequence
location: 52578..53621
location: region:52578-53621:1
so has part: feature:52578-53621:1:exon
subclass of: SO_0000010

position:52578:1
position: 52578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53621:1
position: 53621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52578-53621:1:exon

HAP48_RS49480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49480
old locus tag: HAP48_0049480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006018770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBASS cGAMP-activated phospholipase
translation: MSVDDMPPAYKILSIDGGGIRGVFPAAFLAKLEDHLDAPLASYFDLIAGTSTGGIIAIALGLGLTAKEILKLYEEQGPAIFDQQHGAIANFLLQRWRGARHLCASKYSSKPLHDALIGVLGDRRLGESRTRLVVPAWHPMLERVYIYKTAHHPRLETDYKVSAVDAAMATAAAPTFLDPHTTEDAIELVDGGVWANNPIGVASIEAIGMLNLPADRLKILSIGTINDVKAPPRWKGKLPMVTSMARLFMAGQSHSAMGTAKIVTGDVHHRQAIWRIDQTAPLGRYTLDNARRIAEMKNRGFTEAREQLPILRPHFFAEQAKEFVPFHSLKPESESIDGKKSALKPAA
SIO_010081: HAP48_RS49480
subclass of: SO_0000673
so part of: HAP48_RS49480
location: 52578..53621
location: region:52578-53621:1
so has part: feature:52578-53621:1:exon

WP_224497279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52578-53621:1:exon

HAP48_RS49485
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49485
old locus tag: HAP48_0049485
so part of: sequence
location: 53702..53881
location: region:53702-53881:1
so has part: feature:53702-53881:1:exon
subclass of: SO_0000010

position:53702:1
position: 53702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53881:1
position: 53881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53702-53881:1:exon

HAP48_RS49485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49485
old locus tag: HAP48_0049485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDIRLRANLRTVTCAKPSALDNKTVVLEFTRVCRVVGIIDSETGLITDLPRSRPEPEK
SIO_010081: HAP48_RS49485
subclass of: SO_0000673
so part of: HAP48_RS49485
location: 53702..53881
location: region:53702-53881:1
so has part: feature:53702-53881:1:exon

WP_166309190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53702-53881:1:exon

HAP48_RS49490
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49490
old locus tag: HAP48_0049490
so part of: sequence
location: 53939..54322
location: region:53939-54322:1
so has part: feature:53939-54322:1:exon
subclass of: SO_0000010

position:53939:1
position: 53939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54322:1
position: 54322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53939-54322:1:exon

HAP48_RS49490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49490
old locus tag: HAP48_0049490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRADSARKEASEKLKEAAAETCQAWNYRRIGLGGPVQPSPTIGEALKGGFCYLEVKCRRCRTHSLIDLTAVNEVRRKPDTPIWKLEASLRCRHCSEALRGRRPAADIVRLRKEKTLEFEPWYPGEQR
SIO_010081: HAP48_RS49490
subclass of: SO_0000673
so part of: HAP48_RS49490
location: 53939..54322
location: region:53939-54322:1
so has part: feature:53939-54322:1:exon

WP_176399281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53939-54322:1:exon

HAP48_RS49495
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49495
old locus tag: HAP48_0049495
so part of: sequence
location: 54324..54989
location: region:54324-54989:1
so has part: feature:54324-54989:1:exon
subclass of: SO_0000010

position:54324:1
position: 54324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54989:1
position: 54989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54324-54989:1:exon

HAP48_RS49495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49495
old locus tag: HAP48_0049495
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012043454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase
translation: MCNLYSITTNQAAIAGLFRRMNQYVGNLPPMPGVFPDYPAPVIRNTSDDALEMVLMRWGMPPPPRTGGPPVTNIRNTTSPHWRGWLKPESRCLVPANSFAEYAPETNPDTKKKDVVWFALEESRPLFCFAGIWTTFKGDRGTKSKPIPGPHLVYGFLTTAPNAIVEPIHSKAMPVILTTKEEREVWMRAPWDEAKALQRPLPDDALKIVMRGAEKEDKVAA
SIO_010081: HAP48_RS49495
subclass of: SO_0000673
so part of: HAP48_RS49495
location: 54324..54989
location: region:54324-54989:1
so has part: feature:54324-54989:1:exon

WP_166218360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54324-54989:1:exon

HAP48_RS49500
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49500
old locus tag: HAP48_0049500
so part of: sequence
location: 55124..55390
location: region:55124-55390:1
so has part: feature:55124-55390:1:exon
subclass of: SO_0000010

position:55124:1
position: 55124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55390:1
position: 55390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55124-55390:1:exon

HAP48_RS49500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49500
old locus tag: HAP48_0049500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014492187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLMTREKRPAIRTLRGWAISVLQEAGAIRECEEHGWMQDRGDPDARERAFAVARQDPPAGISAQAAAIAIAEVLELIGDTCPECPGGT
SIO_010081: HAP48_RS49500
subclass of: SO_0000673
so part of: HAP48_RS49500
location: 55124..55390
location: region:55124-55390:1
so has part: feature:55124-55390:1:exon

WP_166218357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55124-55390:1:exon

HAP48_RS49505
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49505
old locus tag: HAP48_0049505
so part of: sequence
location: 55444..56064
location: region:55444-56064:1
so has part: feature:55444-56064:1:exon
subclass of: SO_0000010

position:55444:1
position: 55444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56064:1
position: 56064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55444-56064:1:exon

HAP48_RS49505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49505
old locus tag: HAP48_0049505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEKFHKKVQQTKRINIHNDLDGAAFYFTEIVKKKVENGITDALTFDCMAAGTMLAFSFEAYLNFMGDRLVGLWNERDDYHKKIDRVFQKLKITPDWSKRPFSSIGAMKRLRDTLAHRKPQTIEVEKDFIDKTDGQKGKKIDLSGDWERLCSPDMIINAHDDLNEVWKLMIQKSGLDIMEIATGGEGAVVTEKKFVPAAKPLKPAS
SIO_010081: HAP48_RS49505
subclass of: SO_0000673
so part of: HAP48_RS49505
location: 55444..56064
location: region:55444-56064:1
so has part: feature:55444-56064:1:exon

WP_166309196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55444-56064:1:exon

HAP48_RS49510
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49510
old locus tag: HAP48_0049510
pseudo: true
so part of: sequence
location: complement(56061..>56844)
location: region:56061-56844:-1
so has part: feature:56061-56844:-1:exon
subclass of: SO_0000010

position:56061:-1
position: 56061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56844:-1
position: 56844
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56061-56844:-1:exon

HAP48_RS49510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49510
old locus tag: HAP48_0049510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007606466.1
GO function: GO:0045027 - DNA end binding [Evidence IEA]
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ku protein
SIO_010081: HAP48_RS49510
subclass of: SO_0000673
so part of: HAP48_RS49510
location: complement(56061..>56844)
location: region:56061-56844:-1
so has part: feature:56061-56844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56061-56844:-1:exon

HAP48_RS49515
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49515
old locus tag: HAP48_0049515
so part of: sequence
location: complement(56991..58120)
location: region:56991-58120:-1
so has part: feature:56991-58120:-1:exon
subclass of: SO_0000010

position:56991:-1
position: 56991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58120:-1
position: 58120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56991-58120:-1:exon

HAP48_RS49515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49515
old locus tag: HAP48_0049515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3-like element ISRj2 family transposase
translation: MTKKSRRMHSPAFKAKVALAAVKGDKTLAELAQLFDVHPNQITIWKNQLLEGAAGVFGHDKASAETPVDLKALHAKIGELALENGFFVRRAHQGGPAERKAMIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMQRSLLRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDQAWAMDITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVEAVQEALAKHGRPEIFNTDQGSQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASIAKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVIAA
SIO_010081: HAP48_RS49515
subclass of: SO_0000673
so part of: HAP48_RS49515
location: complement(join(56991..57868,57868..58120))
location: region:56991-58120:-1
so has part: feature:57868-58120:-1:exon
so has part: feature:56991-57868:-1:exon

WP_166206328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57868-58120:-1:exon

position:57868:-1
position: 57868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56991-57868:-1:exon

HAP48_RS49520
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49520
old locus tag: HAP48_0049520
pseudo: true
so part of: sequence
location: 58854..>59393
location: region:58854-59393:1
so has part: feature:58854-59393:1:exon
subclass of: SO_0000010

position:58854:1
position: 58854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59393:1
position: 59393
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58854-59393:1:exon

HAP48_RS49520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49520
old locus tag: HAP48_0049520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011510130.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380-like element ISNha3 family transposase
SIO_010081: HAP48_RS49520
subclass of: SO_0000673
so part of: HAP48_RS49520
location: 58854..>59393
location: region:58854-59393:1
so has part: feature:58854-59393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58854-59393:1:exon

HAP48_RS49525
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49525
old locus tag: HAP48_0049525
so part of: sequence
location: 60732..60965
location: region:60732-60965:1
so has part: feature:60732-60965:1:exon
subclass of: SO_0000010

position:60732:1
position: 60732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60965:1
position: 60965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60732-60965:1:exon

HAP48_RS49525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49525
old locus tag: HAP48_0049525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELIVAQPIWKLLHRLRMVTGDAPIEPPNARKQAGWRRMANPSLTEEAEPGGRMSTMLPCRMSKLECRKGISDILMN
SIO_010081: HAP48_RS49525
subclass of: SO_0000673
so part of: HAP48_RS49525
location: 60732..60965
location: region:60732-60965:1
so has part: feature:60732-60965:1:exon

WP_166218334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60732-60965:1:exon

HAP48_RS49530
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49530
old locus tag: HAP48_0049530
so part of: sequence
location: 61265..68251
location: region:61265-68251:1
so has part: feature:61265-68251:1:exon
subclass of: SO_0000010

position:61265:1
position: 61265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68251:1
position: 68251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61265-68251:1:exon

HAP48_RS49530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49530
old locus tag: HAP48_0049530
EC number: 2.7.1.71
inference: COORDINATES: protein motif:HMM:NF041399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase
translation: MKQIDPIALSLFALSFGRHSAAASCREAAVAIAGEVPSRLSRFNPQALANLVNGFSKWPNAAGCREAAVAIAGEVPSKPSRFNPQELANLVNGFSKWPNAAGCCEAAVAIAGEVPSKLSRFNPQELANLVNGFSKWPDAAGCCEAAVAIAGEVPSKLLRFDPQHLANLVNGFSKWPDAAGCREAAVAIAGEVPSKLSRFNPQALANLVNGFSKWPDAAGCREAAVAIAGEVPSKLLRFDPQHLANLVNGFSKWPDAAGCREAAVAIAGEVPSKLLRFDPQHLANLVNGFSKWPDAAGCREAAVAIAGEVPSKLLRFDPQALANLVNGFSKWPDAAGCREAAVAIAGEVPSKLLRFDPQELANLVNGFSKWPDAAGCREAAVAIAGEVPSKLLRFDPQHLANLVNGFSKWPDAAGCREAAVAIAGEVPSKPSRFNPQELANLVNGFSKWPDAAGCREAAVAIAGEVPSKLSRFNPQELANLVNGFSKWPDDAACHRALVDIARGLGRAGQRFGAFTTPQFGMIANALGRSIVRGEEAGEITETALLKDRLHQLAHHLHYDNDRLEQSDVRTIATIFKALAKARLFEDLGSLASTGLDRLNELHRAPGFAAENNLETMGNLCAALVPLARSPHLRWHRRVALHLLNDLQPVVEQKIEAHFNASAAERIRGPLASRGPALSIYQVIKARAVLANMFKRPVIEGKKADLRKRQQELRHGTKETLASTRELIQGDLSNMSWNLIAQIEAESPVDALDAFVEQNAATILDKHPASIFDGHEVLRTMDHEPRPPQGEAGLMRLPVVDMQGRPLATEPETRYSIFHRLTSGAIEVVAVQLLAKPSAFMLARTLTYKGVPYRMDLFGGSKLKAPKPTVLEIAANAPAKPAVASSGGKLLAIPYAETAPGTSFEKLSRAWAPFKEAYWYTQRRGFAAPPAIKDLGPHDYALEGAFKLLLAPDRPANEAHPFRLTGPEGPIALRPHDGCGFIKASLAERMLAVRRAGPEEGPDRMPAYGEGRRSSVPSSALQHYPRSERVAGEAREKAKAWLESRGGESLIGEQLFRTVTAGHIDGSGAVAVPSSDDYLHVPECKSETLTGTGGVLIGRSPYDAPNLRPLAYERVKSAADGDPTAAFLDRCVAMQYSFSVAEKSREELAADDPSFFAKGILIVVPDELWPADYTDRGLVMSAEDVKCHSNWTERKDRVKADTLVDCVGILQATEVFAPGSLVAVPTGEQKKLDGDFDGDTIVIVGDRPQLYEHVRLFDDKEQARGVRSLKPPKSHTPAIEGNDYKFSRASQILAATRDTLEIYSGLQRSFLAQSHQARRWFAERSVFGTYEGLHHELQRDIRQLLNQEQVSAQDVEQMLDRARPEIKVADHAVAHEIAELLVTDLEAWAASLDEQVLVETVESARDTKLTVSPALAELFPDLAETYPAATHPRDRIQAVLDNYPPRISPRPDGYSADDLVQSASNLLSLGIKVGTDAFKSDTSVQLFMKKSQGLQRLLQQTPGLKSVPYVKSMATTLNHGMFNVDTTLEDLKDNPTLAASIMEASINLAAEQGILPRPFDRQPAEDSAITLTLTREQASERAQTEVARAAVEEKAITAAALQVAKDLRHTGIDVKMPHFDHRLRSESSLRDQLMVVNDVPEGASQLISSAVRHVFEAPDKDFAKAFRKAILSFEEQGYTEISTANWFRVSAPTIVGIKTVLATPDGYRFEAEFHTPGSYQAKLANHDTYKELQRLRRSDAPDDRKMEQLTQRVREVCKEVAIPEGVGAISHWSIEGAPTAGVGAARSAQQTRTAERSPTAKEVVAALDGRPIVLVGMPSCGKSTIGPYLARRLGLPFIDSDKKIETAAGMSISDIFTAKGEPHFRDLEAGLIAECLERGPAVLATGGGAFMREETRRHVAEKGLSIWLNADAGEIRKRLARDTTRPLLQTEDRGDKITQLIRERGPFYQLADLTIIPGKRDNKNADQCVAALHAYLCDEAGALEAASAHSARAPSDIEGGL…
SIO_010081: HAP48_RS49530
subclass of: SO_0000673
so part of: HAP48_RS49530
location: 61265..68251
location: region:61265-68251:1
so has part: feature:61265-68251:1:exon

WP_224497278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61265-68251:1:exon

HAP48_RS49535
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49535
old locus tag: HAP48_0049535
pseudo: true
so part of: sequence
location: complement(<68331..>69341)
location: region:68331-69341:-1
so has part: feature:68331-69341:-1:exon
subclass of: SO_0000010

position:68331:-1
position: 68331
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:69341:-1
position: 69341
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68331-69341:-1:exon

HAP48_RS49535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49535
old locus tag: HAP48_0049535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578756.1,RefSeq:WP_012452059.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380-like element ISBdi2 family transposase
SIO_010081: HAP48_RS49535
subclass of: SO_0000673
so part of: HAP48_RS49535
location: complement(<68331..>69341)
location: region:68331-69341:-1
so has part: feature:68331-69341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68331-69341:-1:exon

HAP48_RS49540
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49540
old locus tag: HAP48_0049540
pseudo: true
so part of: sequence
location: 69514..>70053
location: region:69514-70053:1
so has part: feature:69514-70053:1:exon
subclass of: SO_0000010

position:69514:1
position: 69514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70053:1
position: 70053
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69514-70053:1:exon

HAP48_RS49540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49540
old locus tag: HAP48_0049540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: HAP48_RS49540
subclass of: SO_0000673
so part of: HAP48_RS49540
location: 69514..>70053
location: region:69514-70053:1
so has part: feature:69514-70053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69514-70053:1:exon

HAP48_RS49545
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49545
old locus tag: HAP48_0049545
pseudo: true
so part of: sequence
location: complement(70063..>70491)
location: region:70063-70491:-1
so has part: feature:70063-70491:-1:exon
subclass of: SO_0000010

position:70063:-1
position: 70063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70491:-1
position: 70491
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70063-70491:-1:exon

HAP48_RS49545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49545
old locus tag: HAP48_0049545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611419.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: HAP48_RS49545
subclass of: SO_0000673
so part of: HAP48_RS49545
location: complement(70063..>70491)
location: region:70063-70491:-1
so has part: feature:70063-70491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70063-70491:-1:exon

HAP48_RS49550
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49550
old locus tag: HAP48_0049550
so part of: sequence
location: 70448..71431
location: region:70448-71431:1
so has part: feature:70448-71431:1:exon
subclass of: SO_0000010

position:70448:1
position: 70448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71431:1
position: 71431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70448-71431:1:exon

HAP48_RS49550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49550
old locus tag: HAP48_0049550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273859.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MIFPVATSSAANNVVTLAILRDWKQPACLVGIEACGSAHYWAREIATLGHEVRLIPPAYVKPFVKRGKTDAADAEAISEAVTRKTMRFVPIKTAEQQAGTMVLKSRALLVKQQTQTINALRSHLAELGIIAAAGRTKVEALVAIVRDVADIRLPAAARFALTAVADQIEAQADQIDKLERAIVAAARTDKDMRRLTTIPGIGAITAATIKALVPDPGGFKSARHFAAWLGLTPRQHSSGGKERMGRISKMGNPELRSLLVLGATSVLRIARKADRAPPWLKSLLARRPYKVAAVALANKTARIAWALLNRGGIYRHPETLATTTPAA
SIO_010081: HAP48_RS49550
subclass of: SO_0000673
so part of: HAP48_RS49550
location: 70448..71431
location: region:70448-71431:1
so has part: feature:70448-71431:1:exon

WP_224497283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70448-71431:1:exon

HAP48_RS49555
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49555
old locus tag: HAP48_0049555
so part of: sequence
location: 71739..72710
location: region:71739-72710:1
so has part: feature:71739-72710:1:exon
subclass of: SO_0000010

position:71739:1
position: 71739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72710:1
position: 72710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71739-72710:1:exon

HAP48_RS49555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49555
old locus tag: HAP48_0049555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRAQGLFPWVICGADFDNGSAFMNDVVVPWCRAQKIEVTRSRAYKKNDQAFVEQKNGAVVRRLVGYGRFDGVETARVMARLYAAARLLVNFFQPSFKLKEKRREGAKIIKRYHPPATPYERALGHPKLPSAVKRRLRQTYRTLDPIQLLATIRTAQEELGERIGKRGLAKVPTVSPADPLSFARSLGTAAKTAEVRGTHRRPKRRYKKRIRMPSKLDPHLAIIENWLAVEPQLTALAIVGRLATIDPSMFSDKQHSIVQRLLRSLRRKVAETAIVSMPVDEIRPEAVDGAACDEHSAPPTASPPSWPRLETGLGQFVDLHPG
SIO_010081: HAP48_RS49555
subclass of: SO_0000673
so part of: HAP48_RS49555
location: 71739..72710
location: region:71739-72710:1
so has part: feature:71739-72710:1:exon

WP_176399280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71739-72710:1:exon

HAP48_RS49560
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49560
old locus tag: HAP48_0049560
pseudo: true
so part of: sequence
location: 72836..73863
location: region:72836-73863:1
so has part: feature:72836-73863:1:exon
subclass of: SO_0000010

position:72836:1
position: 72836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73863:1
position: 73863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72836-73863:1:exon

HAP48_RS49560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49560
old locus tag: HAP48_0049560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019863552.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HAP48_RS49560
subclass of: SO_0000673
so part of: HAP48_RS49560
location: 72836..73863
location: region:72836-73863:1
so has part: feature:72836-73863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72836-73863:1:exon

HAP48_RS49565
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49565
old locus tag: HAP48_0049565
so part of: sequence
location: complement(74202..75452)
location: region:74202-75452:-1
so has part: feature:74202-75452:-1:exon
subclass of: SO_0000010

position:74202:-1
position: 74202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75452:-1
position: 75452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74202-75452:-1:exon

HAP48_RS49565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49565
old locus tag: HAP48_0049565
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011024495.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MSEAKPYDISKHLVWQAWKQVKANQGAAGVDGVSVAAFEKDLKRNLYKVWNRMSSGTYFPPPVRLVEIPKSDGKSVRKLGIPAVGDRVAQTVAKMVIEKEVEPVFHPDSYGYRPGRSALDAVGKARERCWKFDWVIDLDIKSFFDTIPWDLMEKAVAHHVELGWVRLYVRRWLQATVERKDGTRDERTRGTPQGSVVSPVLSNLFMHYCFDAWMQRTFSHLRFERFADDAIVHCWSEEEAKAVLGAIRNRLAECGLELHPEKTRIVYCKDNNRSGGYEQITFDFLGYTFRPRKARDSKGEKFVSFAPAISRKAAKGIRQAIREWRVTSRSNQTLEDLAKLIDPVARGWLNYYGRFYRSECVNVLRHVNMVLTRWVMGKYKRFKRRKTAAISWLGRLAKRAPSLLYLWKVGIRPTAG
SIO_010081: HAP48_RS49565
subclass of: SO_0000673
so part of: HAP48_RS49565
location: complement(74202..75452)
location: region:74202-75452:-1
so has part: feature:74202-75452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74202-75452:-1:exon

HAP48_RS49570
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49570
old locus tag: HAP48_0049570
pseudo: true
so part of: sequence
location: <76118..>76405
location: region:76118-76405:1
so has part: feature:76118-76405:1:exon
subclass of: SO_0000010

position:76118:1
position: 76118
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:76405:1
position: 76405
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76118-76405:1:exon

HAP48_RS49570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49570
old locus tag: HAP48_0049570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006022633.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ku protein
SIO_010081: HAP48_RS49570
subclass of: SO_0000673
so part of: HAP48_RS49570
location: <76118..>76405
location: region:76118-76405:1
so has part: feature:76118-76405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76118-76405:1:exon

HAP48_RS49575
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49575
old locus tag: HAP48_0049575
so part of: sequence
location: complement(76335..76661)
location: region:76335-76661:-1
so has part: feature:76335-76661:-1:exon
subclass of: SO_0000010

position:76335:-1
position: 76335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76661:-1
position: 76661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76335-76661:-1:exon

HAP48_RS49575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49575
old locus tag: HAP48_0049575
inference: COORDINATES: protein motif:HMM:NF024908.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRHVRDVIRLKSAGMPTREIARRVGTAPSTVRLTIRRFEAAGLTWPLPDDVTDTVPEARLFANAGAGPGTRRQASPDTSRRLSPRRRRSCAARPSDRRRSRRAGAPSE
SIO_010081: HAP48_RS49575
subclass of: SO_0000673
so part of: HAP48_RS49575
location: complement(76335..76661)
location: region:76335-76661:-1
so has part: feature:76335-76661:-1:exon

WP_224497282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76335-76661:-1:exon

HAP48_RS49580
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49580
old locus tag: HAP48_0049580
so part of: sequence
location: complement(77089..77997)
location: region:77089-77997:-1
so has part: feature:77089-77997:-1:exon
subclass of: SO_0000010

position:77089:-1
position: 77089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77997:-1
position: 77997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77089-77997:-1:exon

HAP48_RS49580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49580
old locus tag: HAP48_0049580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014857744.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTKPVGKPDAGKLHVRFDERGEETERATSASPRLSSTLLKRGKTDAADAEAISEAVTRKTMRFVPIKTAEQQAGTMVLKSRALLVKQQTQTINALRSHLAELGIIAAAGRTKVEALVAIVRDVADIRLPAAARFALTAVADQIEAQADQIDKLERAIVAAARTDKDMRRLTTIPGIGAITAATIKALVPDPGGFKSARHFAAWLGLTPRQHSSGGKERMGRISKMGNPELRSLLVLGATSVLRIARKADRAPPWLKSLLARRPYKVAAVALANKTARIAWALLNRGGIYRHPETLATTTPAA
SIO_010081: HAP48_RS49580
subclass of: SO_0000673
so part of: HAP48_RS49580
location: complement(77089..77997)
location: region:77089-77997:-1
so has part: feature:77089-77997:-1:exon

WP_224497195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77089-77997:-1:exon

HAP48_RS49585
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49585
old locus tag: HAP48_0049585
so part of: sequence
location: complement(77994..79325)
location: region:77994-79325:-1
so has part: feature:77994-79325:-1:exon
subclass of: SO_0000010

position:77994:-1
position: 77994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79325:-1
position: 79325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77994-79325:-1:exon

HAP48_RS49585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: ltrA
locus tag: HAP48_RS49585
old locus tag: HAP48_0049585
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004111509.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MGRLAMSLQTPDKIRSLQRKLYCKAKAEPAFRFYVLYDKICREDILSHAYKLARANAGAPGVDGTTFEQIDASGLEAWLAGLRDELVTKTYRPDPVRRVMIPKPGGGERPLGIPTIRDRVVQAAAKIVLEPIFEADFEDGAYGYRPRRNAVDAVKEVHRLVCRGYTDVVDADLSKYFDTIPHSDLLKSVARRIVDRNVLRLIKLWLRVPVEERDSDGKRCMSGGKSNKRGTPQGGVISPLLSVIYMNRFLKHWRLSGRREAFHAQVISYADDFVILSRGHAEEALTWTKAVMTKLGLTLNETKTSVKNARLESFDFLGYTLGPRRFRNGGRWYLGAAPSKKSVLRIKRKVSVLLTPGNKGAWPEVQARLNRLLRGWSAYFSYGSLATAHQAVDRHVFDRVLAFLRRRHKTPGRGVRRFSDRIHGNPGVLVLNRVRKVSPTCAL
SIO_010081: HAP48_RS49585
subclass of: SO_0000673
so part of: HAP48_RS49585
location: complement(77994..79325)
location: region:77994-79325:-1
so has part: feature:77994-79325:-1:exon

WP_224496640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77994-79325:-1:exon

HAP48_RS49590
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49590
old locus tag: HAP48_0049590
pseudo: true
so part of: sequence
location: complement(<79802..80050)
location: region:79802-80050:-1
so has part: feature:79802-80050:-1:exon
subclass of: SO_0000010

position:79802:-1
position: 79802
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:80050:-1
position: 80050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79802-80050:-1:exon

HAP48_RS49590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49590
old locus tag: HAP48_0049590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012335275.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: HAP48_RS49590
subclass of: SO_0000673
so part of: HAP48_RS49590
location: complement(<79802..80050)
location: region:79802-80050:-1
so has part: feature:79802-80050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79802-80050:-1:exon

HAP48_RS49595
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: istB
locus tag: HAP48_RS49595
old locus tag: HAP48_0049595
so part of: sequence
location: complement(80243..81085)
location: region:80243-81085:-1
so has part: feature:80243-81085:-1:exon
subclass of: SO_0000010

position:80243:-1
position: 80243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81085:-1
position: 81085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80243-81085:-1:exon

HAP48_RS49595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: istB
locus tag: HAP48_RS49595
old locus tag: HAP48_0049595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006611535.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTGIATSVDTARVELLLNELRLPGVKAIWPKLAAQSDKEGWPAARFLAALAEHEAADRTRRRIERHMVEARLPAGKTLATFDFESVPMLSKAQAMALAAGDAWLKAGANLLLFGPPGGGKTHLGTAIGLALVENGWRVLFARTTDLVQRLQVARRELALESAIAKLDRYDLLILDDITYVSKDQAETSVLFELIAARYERRSLLITANQPFGEWGRIFPDQAMTLVAIDRLVHHATILEMNVESYRRKVALDRKRGPGRPPVHTTPNELDKATIDAGNPA
SIO_010081: HAP48_RS49595
subclass of: SO_0000673
so part of: HAP48_RS49595
location: complement(80243..81085)
location: region:80243-81085:-1
so has part: feature:80243-81085:-1:exon

WP_176399279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80243-81085:-1:exon

HAP48_RS49600
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: istA
locus tag: HAP48_RS49600
old locus tag: HAP48_0049600
so part of: sequence
location: complement(81082..82584)
location: region:81082-82584:-1
so has part: feature:81082-82584:-1:exon
subclass of: SO_0000010

position:81082:-1
position: 81082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82584:-1
position: 82584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81082-82584:-1:exon

HAP48_RS49600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: istA
locus tag: HAP48_RS49600
old locus tag: HAP48_0049600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018268148.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MRLYMTYRLTLSREAAAAKAGFSKASAYRIEGDCRPPSQKKTPRGRRRADPLGPYWDAEIVPILKAAPGIRVIGVLDELRRRHHELNPNIRRTLERRINAWRALNGPEQDVIFRQQHEPGRLGLSDFTDVSALGITIAGEPLDHRLYHFRLAFSGFEHAHVVLGGESFVALAEGLQNALWALGGVPREHRSDSLSAAFRNLAADAREDLTQRYAGLMGHYGMAPTRNNAGIAHENGSIESAHGHLKRALEDALLLRGTRDFASLDAYRAFVDEIVGRRNANVAKPIALEKEALAPLPKGRTTDFEEKVIPVTSSGGFILRRVFYTVPSRLIGHRLRVRIFDDRLECFVGVTPVVTLRRGRPVSERQGGHVVDYRHVIHALRRKPMALLNLVYRDQLFPRAAYKRLFETLREHGDDRRACKVTVELLALAHERACEAELAEVIAMDLDAGQLPDLAALRDRFRPEAASIPRVAVKLAPLDVYDELACVSVMSGRSNLGEAA
SIO_010081: HAP48_RS49600
subclass of: SO_0000673
so part of: HAP48_RS49600
location: complement(81082..82584)
location: region:81082-82584:-1
so has part: feature:81082-82584:-1:exon

WP_166216890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81082-82584:-1:exon

HAP48_RS49605
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49605
old locus tag: HAP48_0049605
so part of: sequence
location: complement(83010..83255)
location: region:83010-83255:-1
so has part: feature:83010-83255:-1:exon
subclass of: SO_0000010

position:83010:-1
position: 83010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83255:-1
position: 83255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83010-83255:-1:exon

HAP48_RS49605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49605
old locus tag: HAP48_0049605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018321970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKAREFIDFWIENSVHAVEQYRTVGASQDVAELSRRLIDAAKEQGIPEADLEAEIGDISDYIAGQLEAANRAESERRKLT
SIO_010081: HAP48_RS49605
subclass of: SO_0000673
so part of: HAP48_RS49605
location: complement(83010..83255)
location: region:83010-83255:-1
so has part: feature:83010-83255:-1:exon

WP_166107283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83010-83255:-1:exon

HAP48_RS49610
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49610
old locus tag: HAP48_0049610
pseudo: true
so part of: sequence
location: complement(<85050..>85842)
location: region:85050-85842:-1
so has part: feature:85050-85842:-1:exon
subclass of: SO_0000010

position:85050:-1
position: 85050
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:85842:-1
position: 85842
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85050-85842:-1:exon

HAP48_RS49610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49610
old locus tag: HAP48_0049610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612067.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: HAP48_RS49610
subclass of: SO_0000673
so part of: HAP48_RS49610
location: complement(<85050..>85842)
location: region:85050-85842:-1
so has part: feature:85050-85842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85050-85842:-1:exon

HAP48_RS49615
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49615
old locus tag: HAP48_0049615
so part of: sequence
location: complement(86106..87026)
location: region:86106-87026:-1
so has part: feature:86106-87026:-1:exon
subclass of: SO_0000010

position:86106:-1
position: 86106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87026:-1
position: 87026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86106-87026:-1:exon

HAP48_RS49615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49615
old locus tag: HAP48_0049615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273923.1
GO function: GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SWIM zinc finger family protein
translation: MSYYGWHAYVPVAEKRRQAERKLAKLKKQGRSVAPVRIEGRTITKSFWGRSWCVNLERYSDYENRLPRGRTYVRNGSVIDLQIAKGEISAMVAGSELYQIKIVIAPVTRARWKSICRDCAGTVDSLVELLQGRLAKGVMDRVCREGDGLFPSPTEIKLSCSCPDWADMCKHVAAALYGVGARLDEKPQLLFVLRDVDETEMLASAGQDSPLTTASGAAKVLDEGDVAALFGLEMAETPHTPNPALTVAKRPQQSKAQKGKISARKTKRAAKTDVALHRATRVSSGTKKTTRASARKRRTRGCPDRC
SIO_010081: HAP48_RS49615
subclass of: SO_0000673
so part of: HAP48_RS49615
location: complement(86106..87026)
location: region:86106-87026:-1
so has part: feature:86106-87026:-1:exon

WP_166218001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86106-87026:-1:exon

HAP48_RS49620
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49620
old locus tag: HAP48_0049620
so part of: sequence
location: complement(87023..89731)
location: region:87023-89731:-1
so has part: feature:87023-89731:-1:exon
subclass of: SO_0000010

position:87023:-1
position: 87023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89731:-1
position: 89731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87023-89731:-1:exon

HAP48_RS49620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49620
old locus tag: HAP48_0049620
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011511274.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MMTLEPVLTPHGLLTLRQTAQAPALEPDQGLRLEKAFLRGSGHGLLWLGADEVATVLPPVLSYWRELGMRYMTALCALPSVGDGRTKPPVPIPADGELDTMAAAVPPMTGAEYLTTSVLANLWRGMDAAFDAELVQAKLSVQEFLKSRHPAWNLVGRVHFNLAENRKDEEAPFAFLATYTTRLSAGAKAQHLPLGKALQEYSGARNRQRLLSLLMPVQRAAESCPWLKTMVDAGDIFHPLRWSPQQALQFLKDVPALESAGVVVRMPASWRMNHPARPQVKATVGGNAPSQLGMDALLDFRMEVTLEGESLSKADIKRLLAHSDGLTLIRGKWVEVDHERLHRTLEQFEAIERRAAADGLSFGEAMRLLAGAGIAGDKTAAPADIDWSQTVAGPWLAETLATLRHPDWLMRVDPGQHFQGTLRPYQQSGVQWLYLLTQLKLGACLADDMGLGKTIQVLSLLLVIKNEDMAIRKPCLLVAPASLLANWAAEISRFAPTLKTVVVHPSAAPSEKLNTYSADRCADVDLVITSYGFLTRTPWLETTSWRFVVLDEAQAIKNPGAKQTKSVKRLKAEMRIALTGTPIENRLGDLWSIFDFINPGLLGSSKEFSAFVKRLADRPHNPYGPLRQLVRPYILRRLKTDKSIIADLPDKTEVKTFCPLSRKQAALYQQAVAELAGHLEEVDGIKRRGIVLAFLMRLKQICNHPSQWLGDGAWNEEDSGKLVRLRDIAEVVAARQEKALIFTQFKESTAPLVAFLGSVFGRPGLVLHGETEVKKRKDLVRQFQEDEDVPFFVLSVKAGGTGLNLTAASHVIHFDRWWNPAVESQATDRAFRIGQTKNVLVHKFVCRGTVEEKIDHMIESKKQLAGDFLSGGADILLTEMKDEELLRLVTLDLGAAMKEGDE
SIO_010081: HAP48_RS49620
subclass of: SO_0000673
so part of: HAP48_RS49620
location: complement(87023..89731)
location: region:87023-89731:-1
so has part: feature:87023-89731:-1:exon

WP_176399278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87023-89731:-1:exon

HAP48_RS49625
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49625
old locus tag: HAP48_0049625
so part of: sequence
location: complement(89904..91126)
location: region:89904-91126:-1
so has part: feature:89904-91126:-1:exon
subclass of: SO_0000010

position:89904:-1
position: 89904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91126:-1
position: 91126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89904-91126:-1:exon

HAP48_RS49625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49625
old locus tag: HAP48_0049625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612068.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTTKTRRKIDAALKAKIALEAVREQATVADLAQRYEVHPNQIYAWKKQLLDQAARAFDAGVGRESEETREREIEKLHAKIGQLTVERDFLARKVRKMSTPDRRGMLDRADKALSIRRQCLLLGIARFGVYRPPRPANDNDLALMRRIDELFIAWPFLGSRRMTAMLKAEGLQVNRKRVQRLMRKMGIAALGPKPNTTKPAPGHKIYPYLLRNMTIDRPNQVWAADITYLPIGRGFLYLVAIIDWASRAVLAWRLSNTMDVSFCVAALEEALAKYGRPEIFNTDQGSQFTSAAFTGALAGAGIKISMDGRGRWMDNVFIERLWRSLKHEDIYLKGYADGREAKAGVASWIAFYNDRRLHQALGYRTPMAVWRERMQAAKAVDMVDNADALTTCPSNSSRQSLWQRDRK
SIO_010081: HAP48_RS49625
subclass of: SO_0000673
so part of: HAP48_RS49625
location: complement(join(89904..90850,90850..91126))
location: region:89904-91126:-1
so has part: feature:90850-91126:-1:exon
so has part: feature:89904-90850:-1:exon

WP_224497277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90850-91126:-1:exon

position:90850:-1
position: 90850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89904-90850:-1:exon

HAP48_RS49630
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49630
old locus tag: HAP48_0049630
so part of: sequence
location: complement(91198..91371)
location: region:91198-91371:-1
so has part: feature:91198-91371:-1:exon
subclass of: SO_0000010

position:91198:-1
position: 91198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91371:-1
position: 91371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91198-91371:-1:exon

HAP48_RS49630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49630
old locus tag: HAP48_0049630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTPDEIGAKLVQIELSQSERNVDVLKDDGFLLESPAAVAECVLQFILVKELLTAPI
SIO_010081: HAP48_RS49630
subclass of: SO_0000673
so part of: HAP48_RS49630
location: complement(91198..91371)
location: region:91198-91371:-1
so has part: feature:91198-91371:-1:exon

WP_224497276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91198-91371:-1:exon

HAP48_RS49635
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49635
old locus tag: HAP48_0049635
so part of: sequence
location: complement(91574..93775)
location: region:91574-93775:-1
so has part: feature:91574-93775:-1:exon
subclass of: SO_0000010

position:91574:-1
position: 91574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93775:-1
position: 93775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91574-93775:-1:exon

HAP48_RS49635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49635
old locus tag: HAP48_0049635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011511276.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MKPQPEPSSREVLAGLVERVTYHNDGNGYCVLRIKARGHRELVTVVGHAAVISAGEWITASGEWVNDRTHGQQYRAKFLKTSEPTSLDGIEKYLGSGMIRGIGPVYAKKLVRAFGEKVFDTIEAEPERLREVTGIGPVRANRITAAWAEQKIVREIMVFLHSNGVGTARAVRIYKTYGADAVQVMTENPYRLARDIRGIGFKTADAIAMKLGIEKTAMIRVRAGISYGLTEAMDEGHCGLPTDELLPLAEKLLEVPVELVRIALDLERTAGTVIADSVGETSCVFLVGLHRAERSIAERLIRLANGTLPWPWINPDKALPWVEQRIGLTLAESQVAAIRLALMSKALVMTGGPGVGKTTIVKGILRILAAKGVRLLLCAPTGRAAKRMTEATGFEARTIHRLLEVDPKGGGFKRGEDNPLDCDLLVVDEASMVDVMLMQSLIKAVPDKSALLIVGDIDQLPSVGPGQVLADVISSGAVPVVRLTEVFRQAAQSRIIISAHRINQGAIPDLSLPGTDSDFYFVQAGDPETAVQRIIELVKTRIPNRFGLDPIRDIQVLCPMNRGGVGARSLNIELQTALNPAGERKVERFGSTFASGDKVMQIENDYDKEVYNGDIGYIDDVSSEDSELTASFDGRSVIYEFGELDTLVPAYAATIHKSQGSEYPAVVIPVMTQHYTMLQRNLLYTGVTRGKQLVVLVGQKKAVAIAVRNVSGRRRWSKLNEWLASRIASMPTR
SIO_010081: HAP48_RS49635
subclass of: SO_0000673
so part of: HAP48_RS49635
location: complement(91574..93775)
location: region:91574-93775:-1
so has part: feature:91574-93775:-1:exon

WP_166218322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91574-93775:-1:exon

HAP48_RS49640
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49640
old locus tag: HAP48_0049640
so part of: sequence
location: complement(93940..94104)
location: region:93940-94104:-1
so has part: feature:93940-94104:-1:exon
subclass of: SO_0000010

position:93940:-1
position: 93940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94104:-1
position: 94104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93940-94104:-1:exon

HAP48_RS49640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49640
old locus tag: HAP48_0049640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGVSAAKIDRLLVETKIAAAGGNRKAKSRLAGLLYSSILTPHGGYRHISPDAH
SIO_010081: HAP48_RS49640
subclass of: SO_0000673
so part of: HAP48_RS49640
location: complement(93940..94104)
location: region:93940-94104:-1
so has part: feature:93940-94104:-1:exon

WP_166218004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93940-94104:-1:exon

HAP48_RS49645
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49645
old locus tag: HAP48_0049645
so part of: sequence
location: 94304..94630
location: region:94304-94630:1
so has part: feature:94304-94630:1:exon
subclass of: SO_0000010

position:94304:1
position: 94304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94630:1
position: 94630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94304-94630:1:exon

HAP48_RS49645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49645
old locus tag: HAP48_0049645
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSVDSQSPPRAITGAATRALQLRCGRRKRRAILASAFSMALQKQKITKDQLHELILERFGLINFFQVSEDRQLGFRTTVVAAPADLYELHSRLERICSELRPRFELE
SIO_010081: HAP48_RS49645
subclass of: SO_0000673
so part of: HAP48_RS49645
location: 94304..94630
location: region:94304-94630:1
so has part: feature:94304-94630:1:exon

WP_166218007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94304-94630:1:exon

HAP48_RS49650
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49650
old locus tag: HAP48_0049650
so part of: sequence
location: 94818..94982
location: region:94818-94982:1
so has part: feature:94818-94982:1:exon
subclass of: SO_0000010

position:94818:1
position: 94818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94982:1
position: 94982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94818-94982:1:exon

HAP48_RS49650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49650
old locus tag: HAP48_0049650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018269971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPIQARFLVRRGSVDWMVYDRDRKGAAQLKDYSLAEKLTKEQAEQIKQRLETA
SIO_010081: HAP48_RS49650
subclass of: SO_0000673
so part of: HAP48_RS49650
location: 94818..94982
location: region:94818-94982:1
so has part: feature:94818-94982:1:exon

WP_166218292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94818-94982:1:exon

HAP48_RS49655
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49655
old locus tag: HAP48_0049655
so part of: sequence
location: 95526..95879
location: region:95526-95879:1
so has part: feature:95526-95879:1:exon
subclass of: SO_0000010

position:95526:1
position: 95526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95879:1
position: 95879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95526-95879:1:exon

HAP48_RS49655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49655
old locus tag: HAP48_0049655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKRQVSGRKLKCATKRRRAKPKRTARRQLDGAFNFATRVFSDFDPTTGGEGEIRDRMVRTAEGRFYLIEGPDIKPSAREVVTPYRLEDVFAWLQDCPEQIERTVIVGNANCNLFER
SIO_010081: HAP48_RS49655
subclass of: SO_0000673
so part of: HAP48_RS49655
location: 95526..95879
location: region:95526-95879:1
so has part: feature:95526-95879:1:exon

WP_166218295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95526-95879:1:exon

HAP48_RS49660
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49660
old locus tag: HAP48_0049660
pseudo: true
so part of: sequence
location: complement(96222..97492)
location: region:96222-97492:-1
so has part: feature:96222-97492:-1:exon
subclass of: SO_0000010

position:96222:-1
position: 96222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97492:-1
position: 97492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96222-97492:-1:exon

HAP48_RS49660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49660
old locus tag: HAP48_0049660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273947.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: HAP48_RS49660
subclass of: SO_0000673
so part of: HAP48_RS49660
location: complement(96222..97492)
location: region:96222-97492:-1
so has part: feature:96222-97492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96222-97492:-1:exon

HAP48_RS49665
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49665
old locus tag: HAP48_0049665
so part of: sequence
location: complement(97724..98410)
location: region:97724-98410:-1
so has part: feature:97724-98410:-1:exon
subclass of: SO_0000010

position:97724:-1
position: 97724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98410:-1
position: 98410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97724-98410:-1:exon

HAP48_RS49665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49665
old locus tag: HAP48_0049665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MGRRARPKADLDTELADLPPELRWREWMGRVEAVIFASPGPVTRETLARVVGRDCSIDLLIDDIRDELRGRPYELVSVAGGWQHRTRKNFAEAIRAAIGAAGDHKALSQTEALILACIAYYQPINRSELSSFFGKEVSRDTIARLRGLEFVAAGPRSPQLGAPYTYVTTKAFLSHFSLETLRDLPDMEMLEEAGLLSKDKMLAGEFPVLASDEADQLEADRDEDDHVT
SIO_010081: HAP48_RS49665
subclass of: SO_0000673
so part of: HAP48_RS49665
location: complement(97724..98410)
location: region:97724-98410:-1
so has part: feature:97724-98410:-1:exon

WP_166218298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97724-98410:-1:exon

HAP48_RS49670
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49670
old locus tag: HAP48_0049670
so part of: sequence
location: complement(98412..99398)
location: region:98412-99398:-1
so has part: feature:98412-99398:-1:exon
subclass of: SO_0000010

position:98412:-1
position: 98412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99398:-1
position: 99398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98412-99398:-1:exon

HAP48_RS49670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49670
old locus tag: HAP48_0049670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MDSKKRRAGLPFRMLARRRIVPDPPPTFAPAPAWLRRRAPPDFVTEAVFYAGAALAALHPIARDEHPLGSLWRQRLALTCAAALARQGGRTEDEAALRDHWYLRRDADDPGPGGRILAAWRKLGERASSSDVEGWIFALATALGHPLGSLPSEIVELASRHTQRQHAMPVLAAAEIIAASGRVLPNEELVPLWLADAVLAHQLRWPAPVPLLAVHLSRGALRKAQQHLEGETVFMNALCAAYATAAVAAIDLYSDLARRATRLLAVAPKLRGKDADIMVGILMVEDAQSAGPGKTASDRSTRRLFERLVSLGAVRELTGRPTFRLYGL
SIO_010081: HAP48_RS49670
subclass of: SO_0000673
so part of: HAP48_RS49670
location: complement(98412..99398)
location: region:98412-99398:-1
so has part: feature:98412-99398:-1:exon

WP_224497275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98412-99398:-1:exon

HAP48_RS49675
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49675
old locus tag: HAP48_0049675
pseudo: true
so part of: sequence
location: 99483..100612
location: region:99483-100612:1
so has part: feature:99483-100612:1:exon
subclass of: SO_0000010

position:99483:1
position: 99483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100612:1
position: 100612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99483-100612:1:exon

HAP48_RS49675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49675
old locus tag: HAP48_0049675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578806.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: HAP48_RS49675
subclass of: SO_0000673
so part of: HAP48_RS49675
location: 99483..100612
location: region:99483-100612:1
so has part: feature:99483-100612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99483-100612:1:exon

HAP48_RS49680
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49680
old locus tag: HAP48_0049680
pseudo: true
so part of: sequence
location: complement(100629..>100787)
location: region:100629-100787:-1
so has part: feature:100629-100787:-1:exon
subclass of: SO_0000010

position:100629:-1
position: 100629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100787:-1
position: 100787
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100629-100787:-1:exon

HAP48_RS49680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49680
old locus tag: HAP48_0049680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: HAP48_RS49680
subclass of: SO_0000673
so part of: HAP48_RS49680
location: complement(100629..>100787)
location: region:100629-100787:-1
so has part: feature:100629-100787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100629-100787:-1:exon

HAP48_RS49685
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49685
old locus tag: HAP48_0049685
so part of: sequence
location: complement(100946..101272)
location: region:100946-101272:-1
so has part: feature:100946-101272:-1:exon
subclass of: SO_0000010

position:100946:-1
position: 100946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101272:-1
position: 101272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100946-101272:-1:exon

HAP48_RS49685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49685
old locus tag: HAP48_0049685
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012318773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MRRGDLVTVSAQGDYGKPRPAVVIQSDVLNAADSVLVVLLTGTIADAPLYRLTIEPTASNGLKLVSQVMVDKVLAYPRAKCGPVIGHLSGADMLALNNMLSVMIGLAD
SIO_010081: HAP48_RS49685
subclass of: SO_0000673
so part of: HAP48_RS49685
location: complement(100946..101272)
location: region:100946-101272:-1
so has part: feature:100946-101272:-1:exon

WP_130230294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100946-101272:-1:exon

HAP48_RS49690
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49690
old locus tag: HAP48_0049690
so part of: sequence
location: complement(101269..101493)
location: region:101269-101493:-1
so has part: feature:101269-101493:-1:exon
subclass of: SO_0000010

position:101269:-1
position: 101269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101493:-1
position: 101493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101269-101493:-1:exon

HAP48_RS49690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49690
old locus tag: HAP48_0049690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018043438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3018 family protein
translation: MARPKHTDDGLTKFQRYRQQQQHRGMKQLRIWVPDPHKPEFAAEARRQGLLLRGRPEESEALDFIAAATEWPES
SIO_010081: HAP48_RS49690
subclass of: SO_0000673
so part of: HAP48_RS49690
location: complement(101269..101493)
location: region:101269-101493:-1
so has part: feature:101269-101493:-1:exon

WP_166218010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101269-101493:-1:exon

HAP48_RS49695
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49695
old locus tag: HAP48_0049695
so part of: sequence
location: 101709..103043
location: region:101709-103043:1
so has part: feature:101709-103043:1:exon
subclass of: SO_0000010

position:101709:1
position: 101709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103043:1
position: 103043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101709-103043:1:exon

HAP48_RS49695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49695
old locus tag: HAP48_0049695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011194944.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MSKYFRPWNIDQTLLLPPNVQDFVPKGHVSRFMVDLVRESLDLREIMGSYVSGLGQPPFDPRMMVALLLHSYASGLYSSRRIAKACRERNDFVMIVALDAPDFRTISDFRKRHLKALGALFVQVLKLCETAGLVKLGHVALDGTKIKANASKHKAMSYERMKKREAELKAEVARMLAAAEAADASEDETFGNSDELPDWTVDKQKRLAKIQQAMAALEADAKLAAEEERRIEAEKEQQRQAEGRKKPGKPAALPSEEPNPKAQRNFTDPESRIMKSKDGFVQAYNAQAAVDAHAQIIVAQELTQHGSDQGQLVPLIEAIESNLGRKPRQASADSGYCSEANLEALDTRSIDGYVAPGRAKHPTVANGKVGGPLTQAMRKKIDDGGFETPYRLRKQVVEPVFGQIKQARGFRQFLLRGIEKVRAEWTMICTVHNLLKLFNLANAA
SIO_010081: HAP48_RS49695
subclass of: SO_0000673
so part of: HAP48_RS49695
location: 101709..103043
location: region:101709-103043:1
so has part: feature:101709-103043:1:exon

WP_166202952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101709-103043:1:exon

HAP48_RS49700
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49700
old locus tag: HAP48_0049700
so part of: sequence
location: 103148..103393
location: region:103148-103393:1
so has part: feature:103148-103393:1:exon
subclass of: SO_0000010

position:103148:1
position: 103148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103393:1
position: 103393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103148-103393:1:exon

HAP48_RS49700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49700
old locus tag: HAP48_0049700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007692751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MPLFIRDDDVDALAAKLQVATKSRTKTEAVRLALEHELQRVREKQPASERAAASIAISRTMGPGGGSFDMKTFTDDMWGDI
SIO_010081: HAP48_RS49700
subclass of: SO_0000673
so part of: HAP48_RS49700
location: 103148..103393
location: region:103148-103393:1
so has part: feature:103148-103393:1:exon

WP_166218013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103148-103393:1:exon

HAP48_RS49705
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49705
old locus tag: HAP48_0049705
so part of: sequence
location: 103393..103824
location: region:103393-103824:1
so has part: feature:103393-103824:1:exon
subclass of: SO_0000010

position:103824:1
position: 103824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103393-103824:1:exon

HAP48_RS49705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49705
old locus tag: HAP48_0049705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008834278.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MYIDASAIVAILGEENDAGDLLARLDSSSSQLLVSPPTVYEAVISLARKKADENGMKGKPVPVHFIETSQSAVAKFLEDFGIKEIMVSADIGQKAVDAAKCYGKVVGHKADLNFGDCFAYAGAKAYHLPLLYKGNDFAETDLA
SIO_010081: HAP48_RS49705
subclass of: SO_0000673
so part of: HAP48_RS49705
location: 103393..103824
location: region:103393-103824:1
so has part: feature:103393-103824:1:exon

WP_166218016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103393-103824:1:exon

HAP48_RS49710
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: repC
locus tag: HAP48_RS49710
old locus tag: HAP48_0049710
so part of: sequence
location: complement(103858..105177)
location: region:103858-105177:-1
so has part: feature:103858-105177:-1:exon
subclass of: SO_0000010

position:103858:-1
position: 103858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105177:-1
position: 105177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103858-105177:-1:exon

HAP48_RS49710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: repC
locus tag: HAP48_RS49710
old locus tag: HAP48_0049710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: METHITTTPFGRRPMTLGQISNQMAARTAKPEAIVHKWQVFQNIREARELLGATDRSLTILNALLTFHPETALTGDAEIVVWPSNVQLMARANGMPATTLRRHIAVLVDCGLVVRRDSPNGKRFARKGRSGEIEQAYGFDLSPIVARAEEFKDLAEAVGAEKKAFRVAKERLTLLRRDIVKLIEAGIEEGVPGNWGRVQQNYQTIIGRLPRSAPRQLLDDVCMDLHALYADIRAELETFTKSQNPDANESHSGRHIQNSNPDPNFESEYSLPKQVEASCTVEETDNVRSLPKRELPLGIVLDACPNLLELVRGGEIRHWRDFLAAAEIARPLLGISPSAWREAREAMGEQHAAITLAAIYQRADQINSAGGYLRSLTDRARDGKFSTWPTVMALLRAKLDAQRTAGNAGGPRSERSVGTAPSLRVSEALLKNLQRPKSR
SIO_010081: HAP48_RS49710
subclass of: SO_0000673
so part of: HAP48_RS49710
location: complement(103858..105177)
location: region:103858-105177:-1
so has part: feature:103858-105177:-1:exon

WP_166218020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103858-105177:-1:exon

HAP48_RS49715
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: repB
locus tag: HAP48_RS49715
old locus tag: HAP48_0049715
so part of: sequence
location: complement(105440..106459)
location: region:105440-106459:-1
so has part: feature:105440-106459:-1:exon
subclass of: SO_0000010

position:105440:-1
position: 105440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106459:-1
position: 106459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105440-106459:-1:exon

HAP48_RS49715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: repB
locus tag: HAP48_RS49715
old locus tag: HAP48_0049715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013913701.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MTKKPGGKSIIASFGALSANAAEERDSPPASGHGEPPRPLGRVGAGIIGATQRTLQEMREERDRLQALVAKGGDQKLAPDTIDPSPFIDRLPDDGEADFRAFKTSFSEQGQKVPILVRNHPSNPGRYQVVYGRRRLRAARELGMPIRALVADLSDHELALVQGIENSERQDLSWIERALFAAQMDAQGLRPRDIKAAVKADDAEMTKFRTVVQVVPDDVIRSIGRAPKTGRPRWTLLASLVKSDAAAGDRIRETLATAKVSSSDERFQSALAAASSKVDDGKATDEISLQATNGPVIGKATFGRSGVRIQVQNEQGAAFATFLRQELPELVERFIGQAR
SIO_010081: HAP48_RS49715
subclass of: SO_0000673
so part of: HAP48_RS49715
location: complement(105440..106459)
location: region:105440-106459:-1
so has part: feature:105440-106459:-1:exon

WP_166218025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105440-106459:-1:exon

HAP48_RS49720
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: repA
locus tag: HAP48_RS49720
old locus tag: HAP48_0049720
so part of: sequence
location: complement(106456..107682)
location: region:106456-107682:-1
so has part: feature:106456-107682:-1:exon
subclass of: SO_0000010

position:106456:-1
position: 106456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107682:-1
position: 107682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106456-107682:-1:exon

HAP48_RS49720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: repA
locus tag: HAP48_RS49720
old locus tag: HAP48_0049720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006205756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MRRQSAIAASPEAPEDKIIRHAALLSGQLQSIREKMYPPEAQKTLRRFMTHEVSKLISLSEATLRALLRTLSSEGKGPLPTRLDNNYRVYTLDQVNELRRLLAEQRPLEALRFLPHRRDGDHLQIIGVVNFKGGSAKTTTAAHLAHYLALNGYRVLAIDLDPQASLSAMFGAQPEVDVGENETIYATLRYGPERRPMADIVRKTYFPGIDLVPGNIEVMEYEHETPRVLATRSAPKDEIFFERLRLAIAEVEDAYDVVVLDTPPSLGFLTLGAIYASTGMIVTVHPAMLDVMSMSQFLLMMEGLIGTIRDAGGRLQQDFLHYLITRHDPNDQAQAQVVSLLRHLFADDVLAPTAVESTAVESAGLAKRTLYELESGNIGRDTFRRAKDSMDAVNDRILDLIKQSWGRS
SIO_010081: HAP48_RS49720
subclass of: SO_0000673
so part of: HAP48_RS49720
location: complement(106456..107682)
location: region:106456-107682:-1
so has part: feature:106456-107682:-1:exon

WP_166218028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106456-107682:-1:exon

HAP48_RS49725
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49725
old locus tag: HAP48_0049725
pseudo: true
so part of: sequence
location: 108078..108706
location: region:108078-108706:1
so has part: feature:108078-108706:1:exon
subclass of: SO_0000010

position:108078:1
position: 108078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108706:1
position: 108706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108078-108706:1:exon

HAP48_RS49725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49725
old locus tag: HAP48_0049725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518550.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
SIO_010081: HAP48_RS49725
subclass of: SO_0000673
so part of: HAP48_RS49725
location: 108078..108706
location: region:108078-108706:1
so has part: feature:108078-108706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108078-108706:1:exon

HAP48_RS49730
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbB
locus tag: HAP48_RS49730
old locus tag: HAP48_0049730
so part of: sequence
location: 108722..109690
location: region:108722-109690:1
so has part: feature:108722-109690:1:exon
subclass of: SO_0000010

position:108722:1
position: 108722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109690:1
position: 109690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108722-109690:1:exon

HAP48_RS49730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbB
locus tag: HAP48_RS49730
old locus tag: HAP48_0049730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTQLRSHPRLIRKLQEALGDQLCVALDDASVVEIMLNPDGRLFIERLGHGMAAAGEMTAAAAEIVIGSVAHALNSEADDEQPIISGELPIGGHRFEGLLPPIVKAPTFTIRRRASRLIPLDDYVKSRVMTERQADIIRNAVASRLNIVISGGTGSGKTTLANAVIAEIAKTAPEDRILILEDTAEIQCPADNIVALHTSDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVATVHANTAESALRRLEQLTAEASQQPMREVIGEAVDLIVSIERTTSGRVLRDILHVEGFVNDRYQTESYVPKAQADVV
SIO_010081: HAP48_RS49730
subclass of: SO_0000673
so part of: HAP48_RS49730
location: 108722..109690
location: region:108722-109690:1
so has part: feature:108722-109690:1:exon

WP_166218031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108722-109690:1:exon

HAP48_RS49735
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49735
old locus tag: HAP48_0049735
so part of: sequence
location: 109680..110069
location: region:109680-110069:1
so has part: feature:109680-110069:1:exon
subclass of: SO_0000010

position:109680:1
position: 109680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110069:1
position: 110069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109680-110069:1:exon

HAP48_RS49735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49735
old locus tag: HAP48_0049735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MSSERLAAHILLGLALGLLIAHPALASSGGSLPWESPLEQIQKSITGPVAGFIALAAVAVAGGMLIFGGELNDFARRLIYIVLVAGILLGATQIVALFGSTGASIGTVATATTAAPVSPGSRAGEAAHG
SIO_010081: HAP48_RS49735
subclass of: SO_0000673
so part of: HAP48_RS49735
location: 109680..110069
location: region:109680-110069:1
so has part: feature:109680-110069:1:exon

WP_166218034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109680-110069:1:exon

HAP48_RS49740
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49740
old locus tag: HAP48_0049740
so part of: sequence
location: 110062..110361
location: region:110062-110361:1
so has part: feature:110062-110361:1:exon
subclass of: SO_0000010

position:110062:1
position: 110062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110361:1
position: 110361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110062-110361:1:exon

HAP48_RS49740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49740
old locus tag: HAP48_0049740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEAGSALARSRIHRALSRPNLLMGADRELVLLTGFAAVILIFVVLTWYAALFGIAIWTFTVGLLRMMAKADPAMRRVYMRHVGYRQLYRPTSSPWRRF
SIO_010081: HAP48_RS49740
subclass of: SO_0000673
so part of: HAP48_RS49740
location: 110062..110361
location: region:110062-110361:1
so has part: feature:110062-110361:1:exon

WP_166218037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110062-110361:1:exon

HAP48_RS49745
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49745
old locus tag: HAP48_0049745
so part of: sequence
location: 110371..112824
location: region:110371-112824:1
so has part: feature:110371-112824:1:exon
subclass of: SO_0000010

position:110371:1
position: 110371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112824:1
position: 112824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110371-112824:1:exon

HAP48_RS49745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49745
old locus tag: HAP48_0049745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVALHSFRHSGPSFADLVPYAGLVDDGIVLLKDGSLMAGWYFAGPDSESSTDAERNDVSRQINAILARLGSGWMIQVEALRIPTTDYPARKDGHFPDAVTREIDEERRAHFERESGHYESRHALILSWRPPERRKSGLAKYVYSDKDSRSASFADTALGNFRASVREIEQYLSNLLSIQRMRTRTVEERGGSRSARYDELFQFVRFCITGENHPVRLPEVPMYLDWLVTAEYQHGLTPTVDGRYVGVVAIDGLPAESWPGILNILDLMPLTYRWSSRFMFLDEIEARERLERTRKKWQQKVRPFFDQLFQTQSRSVDQDAMAMVAETQDAIAEAASQLVAYGYYTPVIVLQDHDAERLREKCEGIRRVVQAEGFGARIETLNATEAFLGSLPGNWYANVREPLIHTRNLADLLPLNSVWSGSPVAPCPFYPESSPPLMQVASGSTPFRLNLHTDDVGHSLIFGPTGSGKSTLLALIAAQFRRYRDAQIFAFDKGRSLMPLTLAAGGDHYEIGGGAGEGIQFAFCPLAELATDADRAWASEWIETLVVLQGVSVTPDHRNAISRQVALMAAAPGRSLADFVSGVQMREIKDALHHYTVDGPMGHLLDAERDGLTLGGFQTFEIEELMNMGERSLVPVLTYLFRRIEKRLIGAPSLILLDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERLGFNERQVEIVSNAIPKREYYVTSPAGRRLFEMALGPVALAFVGASGRDDLKRITELKTAHGRTWPANWLQTRGIAHADTLLAHD
SIO_010081: HAP48_RS49745
subclass of: SO_0000673
so part of: HAP48_RS49745
location: 110371..112824
location: region:110371-112824:1
so has part: feature:110371-112824:1:exon

WP_176399287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110371-112824:1:exon

HAP48_RS49750
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbJ
locus tag: HAP48_RS49750
old locus tag: HAP48_0049750
so part of: sequence
location: 112796..113614
location: region:112796-113614:1
so has part: feature:112796-113614:1:exon
subclass of: SO_0000010

position:112796:1
position: 112796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113614:1
position: 113614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112796-113614:1:exon

HAP48_RS49750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbJ
locus tag: HAP48_RS49750
old locus tag: HAP48_0049750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892444.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPIRYSPMTRLEFLRGAAVAAMALPFMARSAVAGGGALSGGATEWTQMLNNSELVSLVGKSAEQVNNQIRQITQLAEQIQNQLKIYSNMLQNTAQLPNHVWGQVQNDLNQLRNVVSQGQGIAFSMGNIDDVLKQRFQSYADFKTSLPNNASFSQTYQNWSSTNRDTIGGTLRAASLTADQFSSEEATMSQLRTMSEGADGQMKALQVGHQIATQQVAQMQKLRGLVSQQMTMMATWYQSEQAEKDLSQARRQEFFKSTAPSMSGGQEMRPRW
SIO_010081: HAP48_RS49750
subclass of: SO_0000673
so part of: HAP48_RS49750
location: 112796..113614
location: region:112796-113614:1
so has part: feature:112796-113614:1:exon

WP_166218040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112796-113614:1:exon

HAP48_RS49755
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbL
locus tag: HAP48_RS49755
old locus tag: HAP48_0049755
so part of: sequence
location: 113608..114795
location: region:113608-114795:1
so has part: feature:113608-114795:1:exon
subclass of: SO_0000010

position:113608:1
position: 113608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114795:1
position: 114795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113608-114795:1:exon

HAP48_RS49755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbL
locus tag: HAP48_RS49755
old locus tag: HAP48_0049755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048155.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MVTASFLTRPSTVLAIVVTAAVFLHTVGPAIAAADGGVLTTVENQVVTAAKGWESTVTNAAKSLFWILAGIEVGIAAVWLAIQAATIEAWFAELVRRIMFIGFFAFVLAEGPSFAKAVVDSLFQIGGGSGSASPANVFNAGLTVASAMSQKISFGVFQDNALALSASLAMIVSVIAFSLVAAIFLAVLVEMYVGLLAGMIMLGLGGSSFTKDFAIRYLVYAFSVGMKLMSLVMIAKIGSDVLIGLAQDTSVGDQYQTALAIAGIAVVVFILAMYVPSIVQGVVQGASVSSGMEVIRHGAQAASFAAGGAALAMGGANAGAAAFSAARASGSSVGGAALAGLRGAASAGGALASAAHDKAIGAPGAYAGSLLGLANAKLEKSGGGSPPPPPQKHEK
SIO_010081: HAP48_RS49755
subclass of: SO_0000673
so part of: HAP48_RS49755
location: 113608..114795
location: region:113608-114795:1
so has part: feature:113608-114795:1:exon

WP_166218043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113608-114795:1:exon

HAP48_RS49760
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbF
locus tag: HAP48_RS49760
old locus tag: HAP48_0049760
so part of: sequence
location: 114811..115473
location: region:114811-115473:1
so has part: feature:114811-115473:1:exon
subclass of: SO_0000010

position:114811:1
position: 114811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115473:1
position: 115473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114811-115473:1:exon

HAP48_RS49760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbF
locus tag: HAP48_RS49760
old locus tag: HAP48_0049760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018482029.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MASPNSPENPYIAARQEWTERYGSYVKAASAWRIVGIASLGLALMSTAYALYQSTKVKLVPYIVEVDKLGSSVSAGFPAQIEYADPRVVRATLAGFITNFRSVTPDTVVQKQYIDRVYAMLRTTDPATEKVNAWFRSSSPFDKAKTATVAIEVNNVVPLSPQSFQIDWTEYERDRKGKEVATRRFRGVASVVLIPPQDEAVIRLNPIGLYLKDFDWTAQI
SIO_010081: HAP48_RS49760
subclass of: SO_0000673
so part of: HAP48_RS49760
location: 114811..115473
location: region:114811-115473:1
so has part: feature:114811-115473:1:exon

WP_166107241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114811-115473:1:exon

HAP48_RS49765
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbG
locus tag: HAP48_RS49765
old locus tag: HAP48_0049765
so part of: sequence
location: 115491..116315
location: region:115491-116315:1
so has part: feature:115491-116315:1:exon
subclass of: SO_0000010

position:115491:1
position: 115491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116315:1
position: 116315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115491-116315:1:exon

HAP48_RS49765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbG
locus tag: HAP48_RS49765
old locus tag: HAP48_0049765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240861.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MTATRPTFRAALLIATALVSITGLHSADAQSLNRKEAKGMDISGQWRGRTGLVTRGADGKVIFLFGEVQPSVVCSPLQVCDLELEGGEVVRDVLVGDTVRWKVEPATSGATGGQAIHLIVKPTEPGLVTSMVVTTSRRTYHIQLKSHATQYMARVGFDYPEDVSSRLADVNARIETGGAGVPAEQLNFSYSVSGSAGWRPTQVYSDGTKTYIQFPESVASRDAPVLFVVSGGQNRIVNYRMKSNMMIVDYAVDRAILVSGVGWSQEKITIQRRG
SIO_010081: HAP48_RS49765
subclass of: SO_0000673
so part of: HAP48_RS49765
location: 115491..116315
location: region:115491-116315:1
so has part: feature:115491-116315:1:exon

WP_166218046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115491-116315:1:exon

HAP48_RS49770
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbH
locus tag: HAP48_RS49770
old locus tag: HAP48_0049770
so part of: sequence
location: 116320..116784
location: region:116320-116784:1
so has part: feature:116320-116784:1:exon
subclass of: SO_0000010

position:116320:1
position: 116320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116784:1
position: 116784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116320-116784:1:exon

HAP48_RS49770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbH
locus tag: HAP48_RS49770
old locus tag: HAP48_0049770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MIRPFFSTFRPARAAAFFLTAALLSGCATFGTGGLVASTAPAELLAPAASAVAGDLVPRLAEQIGQGKATIVLKPDGSAFGSALETSLRGWGYAVTTDQDTKDPKAIRLAYVLASMDGQMLARLSTGSIEIGRVYSTTATSALPASPVSVMKRS
SIO_010081: HAP48_RS49770
subclass of: SO_0000673
so part of: HAP48_RS49770
location: 116320..116784
location: region:116320-116784:1
so has part: feature:116320-116784:1:exon

WP_166107236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116320-116784:1:exon

HAP48_RS49775
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
gene: trbI
locus tag: HAP48_RS49775
old locus tag: HAP48_0049775
so part of: sequence
location: 116798..118093
location: region:116798-118093:1
so has part: feature:116798-118093:1:exon
subclass of: SO_0000010

position:116798:1
position: 116798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118093:1
position: 118093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116798-118093:1:exon

HAP48_RS49775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
gene: trbI
locus tag: HAP48_RS49775
old locus tag: HAP48_0049775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MTQSLQLGGGSGGTGAPKDIRRLNRLPIIAAAVLGIVFLAVIFYGLTSRGLVFRSTSDTGSIGGAPATTFADQMKRGVADGLIGDGQQPPPAAPTPEPKPAPQNPFVPQQPAVAEPRGGALESEEAWRARLAREGQEQLLRERQRQRMARLQASNIALDSPLAIDTQKIKAASAATSPAKPGAMTPASSSPTDLYSLALLTGLNGQNLDPNGQAKKETFFNSDLAKLGYLPNQVVPPRSYYELKRGSVIPATLITGINSDLPGRITAQVSQNVFDSATGYRLLIPQGTKLMGRYDSKISFGQSRVLVIWTDIIFPNGSTLQIGGMAGTDAEGYGGFTDQVDNHYFKTFGSAILLAIIGTGMDMAAPQSSTLATQQTASDAARRNFAETFGRVAERTINKNLDVQPTLEIRPGYQFNVLVDQDIVFPGAYRG
SIO_010081: HAP48_RS49775
subclass of: SO_0000673
so part of: HAP48_RS49775
location: 116798..118093
location: region:116798-118093:1
so has part: feature:116798-118093:1:exon

WP_166107234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116798-118093:1:exon

HAP48_RS49780
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49780
old locus tag: HAP48_0049780
so part of: sequence
location: 118565..119275
location: region:118565-119275:1
so has part: feature:118565-119275:1:exon
subclass of: SO_0000010

position:118565:1
position: 118565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119275:1
position: 119275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118565-119275:1:exon

HAP48_RS49780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49780
old locus tag: HAP48_0049780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
translation: MDLKTWFQRLTDVTSAARTQEVLRDALPDLVEELGFDCYAYLYIQPSRTYAYSNYSPEWLKHYFDSDYTTIDPVVKTASTTLRPFTWCSGGSRHSETKEVRRFYSEAGDFGIRSGISIPIRTACRHMSMLTLASSKPSLTLDKDIDQIAAVTAVAFLHAKLEEHNAKPTAQPTFELTAKQTLCLKWSAEGKPMKSIATLENMSFATVNFHLNNARKVLDAGSLAQATALATKLGLI
SIO_010081: HAP48_RS49780
subclass of: SO_0000673
so part of: HAP48_RS49780
location: 118565..119275
location: region:118565-119275:1
so has part: feature:118565-119275:1:exon

WP_166107311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118565-119275:1:exon

HAP48_RS49785
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49785
old locus tag: HAP48_0049785
so part of: sequence
location: complement(119400..119606)
location: region:119400-119606:-1
so has part: feature:119400-119606:-1:exon
subclass of: SO_0000010

position:119400:-1
position: 119400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119606:-1
position: 119606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119400-119606:-1:exon

HAP48_RS49785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49785
old locus tag: HAP48_0049785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007591169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MATGVVKWFNATKGFGFIQPDDGGQDVFVHISAVERAGLSDLREGQKVSYEVKVDQRRGKSSAENLRV
SIO_010081: HAP48_RS49785
subclass of: SO_0000673
so part of: HAP48_RS49785
location: complement(119400..119606)
location: region:119400-119606:-1
so has part: feature:119400-119606:-1:exon

WP_166218049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119400-119606:-1:exon

HAP48_RS49790
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49790
old locus tag: HAP48_0049790
so part of: sequence
location: 120051..121217
location: region:120051-121217:1
so has part: feature:120051-121217:1:exon
subclass of: SO_0000010

position:120051:1
position: 120051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121217:1
position: 121217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120051-121217:1:exon

HAP48_RS49790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49790
old locus tag: HAP48_0049790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018273055.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MEERIRMLMEYESGNWSVSELCRRHGICRDTFYAWRQRKQSGDPEWFRDRSHAPQQCRQTTDAAIAEKVIAARQRFPYLGPRKLLALLDRQAPEIDWPAASTIGSILKRAGLISPVKRRRRPLDQRRPCTPVQEPNDEWSVDFKGWFRTRDQCRIDPLTVADSHSRFLIELQIVAPTTEGVRPRFERAFREHGLPRAIRCDNGSPFGSRGAGGLTTLSVWWLKLGITPHFIRPASPQENGRHERMHRTLKAQTSSPPADNASEQQARFDAFREHYNKERPHEALGQRPPEDAYRASQRTMPDREQDPWYDADHQARRVRGNGEIKWKGKFVFIGQALVNELVGIAELDTGDHVVRFCDLDVGLIDRRGLFTRFAPPREGLREPGEQTA
SIO_010081: HAP48_RS49790
subclass of: SO_0000673
so part of: HAP48_RS49790
location: 120051..121217
location: region:120051-121217:1
so has part: feature:120051-121217:1:exon

WP_224496526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120051-121217:1:exon

HAP48_RS49795
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49795
old locus tag: HAP48_0049795
so part of: sequence
location: 121372..121881
location: region:121372-121881:1
so has part: feature:121372-121881:1:exon
subclass of: SO_0000010

position:121372:1
position: 121372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121881:1
position: 121881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121372-121881:1:exon

HAP48_RS49795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49795
old locus tag: HAP48_0049795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008969630.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Spy/CpxP family protein refolding chaperone
translation: MRIRTIAFAATAVLLTASTLAYAAETSSTVGMGHPSAADLNALTDARVGMIKAALQLTPDQEKYWPPVEGAIRARAKNRQVRFERVAELRDSSPMEAIGERNPVELMQRRAEILSQRAVDLKKLADTWEPLYKTLTPDQKKRMAFATYAAMRGMRDAIEHQIETEDDDD
SIO_010081: HAP48_RS49795
subclass of: SO_0000673
so part of: HAP48_RS49795
location: 121372..121881
location: region:121372-121881:1
so has part: feature:121372-121881:1:exon

WP_224497274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121372-121881:1:exon

HAP48_RS49800
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49800
old locus tag: HAP48_0049800
so part of: sequence
location: complement(122162..122914)
location: region:122162-122914:-1
so has part: feature:122162-122914:-1:exon
subclass of: SO_0000010

position:122162:-1
position: 122162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122914:-1
position: 122914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122162-122914:-1:exon

HAP48_RS49800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49800
old locus tag: HAP48_0049800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007601711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKKILVGAMALSLSVPASAADLAARPYTKAPPPMVAPIYDWTGFYIGANGGWGQSHNCVDFVTAVGTVASGCGDRSGGVAGGQIGYRWQTNQFVFGLEAQGDWADIKNTRVSLFDPTLSTTAKTDAIGLFTGQLGWAWNSALLYVKGGAAVTSNRLTIFDNTTGIGLVSADSTRWGGTLGVGFEYGFAPNWSIGAEYDHLWMGHANNSFSVADPRLAAVLNDRISQDVDMVTVRLNYRFGGYGAPVAARY
SIO_010081: HAP48_RS49800
subclass of: SO_0000673
so part of: HAP48_RS49800
location: complement(122162..122914)
location: region:122162-122914:-1
so has part: feature:122162-122914:-1:exon

WP_166218055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122162-122914:-1:exon

HAP48_RS49855
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49855
pseudo: true
so part of: sequence
location: <123112..>123250
location: region:123112-123250:1
so has part: feature:123112-123250:1:exon
subclass of: SO_0000010

position:123112:1
position: 123112
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:123250:1
position: 123250
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123112-123250:1:exon

HAP48_RS49855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011086257.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO process: GO:0008272 - sulfate transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SulP family inorganic anion transporter
SIO_010081: HAP48_RS49855
subclass of: SO_0000673
so part of: HAP48_RS49855
location: <123112..>123250
location: region:123112-123250:1
so has part: feature:123112-123250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123112-123250:1:exon

HAP48_RS49805
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49805
old locus tag: HAP48_0049805
pseudo: true
so part of: sequence
location: 123344..124009
location: region:123344-124009:1
so has part: feature:123344-124009:1:exon
subclass of: SO_0000010

position:123344:1
position: 123344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124009:1
position: 124009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123344-124009:1:exon

HAP48_RS49805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49805
old locus tag: HAP48_0049805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011086250.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: HAP48_RS49805
subclass of: SO_0000673
so part of: HAP48_RS49805
location: 123344..124009
location: region:123344-124009:1
so has part: feature:123344-124009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123344-124009:1:exon

HAP48_RS49810
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49810
old locus tag: HAP48_0049810
so part of: sequence
location: complement(124286..124552)
location: region:124286-124552:-1
so has part: feature:124286-124552:-1:exon
subclass of: SO_0000010

position:124286:-1
position: 124286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124552:-1
position: 124552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124286-124552:-1:exon

HAP48_RS49810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49810
old locus tag: HAP48_0049810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLFSADVTALTGITAEMVAGHRFDDAATATFVDDAVIVIAHNSGFDRKFAERYWPVFEHKAWGCSMSEIGWRKHGCAGAQLTPRQAT
SIO_010081: HAP48_RS49810
subclass of: SO_0000673
so part of: HAP48_RS49810
location: complement(124286..124552)
location: region:124286-124552:-1
so has part: feature:124286-124552:-1:exon

WP_224497273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124286-124552:-1:exon

HAP48_RS49815
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49815
old locus tag: HAP48_0049815
so part of: sequence
location: 125027..125248
location: region:125027-125248:1
so has part: feature:125027-125248:1:exon
subclass of: SO_0000010

position:125027:1
position: 125027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125248:1
position: 125248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125027-125248:1:exon

HAP48_RS49815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49815
old locus tag: HAP48_0049815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018455636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTILAIACLTALAFASPAEAKGCIKGAIVGGVAGHMAGHGKLGAAAGCVVGYHEANKQNPNNSNAQAPSGQK
SIO_010081: HAP48_RS49815
subclass of: SO_0000673
so part of: HAP48_RS49815
location: 125027..125248
location: region:125027-125248:1
so has part: feature:125027-125248:1:exon

WP_166107228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125027-125248:1:exon

HAP48_RS49820
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49820
old locus tag: HAP48_0049820
so part of: sequence
location: 125272..125517
location: region:125272-125517:1
so has part: feature:125272-125517:1:exon
subclass of: SO_0000010

position:125272:1
position: 125272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125517:1
position: 125517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125272-125517:1:exon

HAP48_RS49820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49820
old locus tag: HAP48_0049820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007609935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIRSHSESHIVELDDGSRWKIFPGDLDLTLNWKPETEIVVMPADDDLSSHLLVGGDAKVRAIAEGESWSAGEVKAVLKEG
SIO_010081: HAP48_RS49820
subclass of: SO_0000673
so part of: HAP48_RS49820
location: 125272..125517
location: region:125272-125517:1
so has part: feature:125272-125517:1:exon

WP_166107227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125272-125517:1:exon

HAP48_RS49825
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49825
old locus tag: HAP48_0049825
so part of: sequence
location: complement(125544..125702)
location: region:125544-125702:-1
so has part: feature:125544-125702:-1:exon
subclass of: SO_0000010

position:125544:-1
position: 125544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125702:-1
position: 125702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125544-125702:-1:exon

HAP48_RS49825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49825
old locus tag: HAP48_0049825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007604914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAFAKVLLRSASVDVGGSDGLKTIMIFCGAGLLLSLLAAMTYGLNLAADFF
SIO_010081: HAP48_RS49825
subclass of: SO_0000673
so part of: HAP48_RS49825
location: complement(125544..125702)
location: region:125544-125702:-1
so has part: feature:125544-125702:-1:exon

WP_166107226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125544-125702:-1:exon

HAP48_RS49830
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49830
old locus tag: HAP48_0049830
so part of: sequence
location: complement(125775..125960)
location: region:125775-125960:-1
so has part: feature:125775-125960:-1:exon
subclass of: SO_0000010

position:125775:-1
position: 125775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125960:-1
position: 125960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125775-125960:-1:exon

HAP48_RS49830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49830
old locus tag: HAP48_0049830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018456570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLSAQESEIRMLQRAGVPTASAELLLVRMRAKVDNLCRERDTLKKAATGQATHPIEIQRT
SIO_010081: HAP48_RS49830
subclass of: SO_0000673
so part of: HAP48_RS49830
location: complement(125775..125960)
location: region:125775-125960:-1
so has part: feature:125775-125960:-1:exon

WP_224497272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125775-125960:-1:exon

HAP48_RS49835
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49835
old locus tag: HAP48_0049835
so part of: sequence
location: 127217..128569
location: region:127217-128569:1
so has part: feature:127217-128569:1:exon
subclass of: SO_0000010

position:127217:1
position: 127217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128569:1
position: 128569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127217-128569:1:exon

HAP48_RS49835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49835
old locus tag: HAP48_0049835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_039183842.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MTDDMILPFSFPAVHAKKVTAAFDGGRLTSNGDVMLLAMAERRLGLADNLARVFPDRRDPTRVVHSLVDMFRARMFAICCGYEDADDLDHLRSDPAFKLACGRLPDTGRDLCSQPTLSRLENAPRLRDVIRLTYTLVDAWMDSYPREPASVTLDIDDTFDVVHGHQQLSLFNAHYDERCFLPIHVYDTEKSRPVAVVLRPGKTPGGVEVRAHLRRLIRHIRTRWHNTRITFRGDGHYARPEAPEAMAWCETNGIDYIFGLSGTKPLARKLDEAADGIRTRRAIENLPVLRGYTETRHKAKSWDRERRTVARIEATMLGLDIRFVVTSLDVGSAEWIYDSLYCARGQAENLIKVHKTQLASDRTSCRSALANQVRLVLDTAAYWLMLTVRDAIPKARELATAEFATLRLRLLKLAARVVETTSRIRLAFAAACPEADLIRGLPGALLPLGP
SIO_010081: HAP48_RS49835
subclass of: SO_0000673
so part of: HAP48_RS49835
location: 127217..128569
location: region:127217-128569:1
so has part: feature:127217-128569:1:exon

WP_166218061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127217-128569:1:exon

HAP48_RS49840
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49840
old locus tag: HAP48_0049840
pseudo: true
so part of: sequence
location: 128803..>130300
location: region:128803-130300:1
so has part: feature:128803-130300:1:exon
subclass of: SO_0000010

position:128803:1
position: 128803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130300:1
position: 130300
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128803-130300:1:exon

HAP48_RS49840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49840
old locus tag: HAP48_0049840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674970.1,RefSeq:WP_018268369.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase
SIO_010081: HAP48_RS49840
subclass of: SO_0000673
so part of: HAP48_RS49840
location: 128803..>130300
location: region:128803-130300:1
so has part: feature:128803-130300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128803-130300:1:exon

HAP48_RS49845
type: Gene
subclass of: SO_0000704
RO_0002162: 1404411
locus tag: HAP48_RS49845
old locus tag: HAP48_0049845
so part of: sequence
location: 130822..131199
location: region:130822-131199:1
so has part: feature:130822-131199:1:exon
subclass of: SO_0000010

position:130822:1
position: 130822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131199:1
position: 131199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130822-131199:1:exon

HAP48_RS49845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1404411
locus tag: HAP48_RS49845
old locus tag: HAP48_0049845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCVIDGRDFLATVFQLGNPDASRGVLGRLFGPAILRYADRAWSLPATDTQGRIGCFDLARQDDEVIAAHAANELVIGGRYQTRFSSAFLVRAPIVPKSILAVERVDHRGYVLPEINITLEKALGR
SIO_010081: HAP48_RS49845
subclass of: SO_0000673
so part of: HAP48_RS49845
location: 130822..131199
location: region:130822-131199:1
so has part: feature:130822-131199:1:exon

WP_166218064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130822-131199:1:exon