Pseudosulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Pseudosulfitobacter.
De novo assembly of human genomes with massively parallel short read sequencing
Submitted (05-JUN-2020) Ministry of natural resources, The first Institute of Oceanography, ZhongHan Street, QingDao 266100, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP054606.1.\nBacteria and source DNA available from China Qingdao Laoshan\nDistrict The first Institute of Oceanography Zheng Li.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CLC NGS Cell v. February-2020\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 103.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/01/2023 23:18:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,846\nCDSs (total) :: 4,793\nGenes (coding) :: 4,747\nCDSs (with protein) :: 4,747\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 46\nCDSs (without protein) :: 46\nPseudo Genes (ambiguous residues) :: 0 of 46\nPseudo Genes (frameshifted) :: 19 of 46\nPseudo Genes (incomplete) :: 23 of 46\nPseudo Genes (internal stop) :: 9 of 46\nPseudo Genes (multiple problems) :: 4 of 46\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
shallow sea, symbosis with harmful algal bloom algae
COORDINATES: similar to AA sequence:RefSeq:WP_004926951.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008887607.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002711443.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009339233.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012113459.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_008944214.1
COORDINATES: similar to AA sequence:RefSeq:WP_014590892.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009804027.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009804044.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014590894.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007670872.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804030.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF013756.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011445208.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010142335.1
COORDINATES: similar to AA sequence:RefSeq:WP_004926972.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005015651.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018066667.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018633666.1
COORDINATES: similar to AA sequence:RefSeq:WP_018066668.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018642604.1
COORDINATES: similar to AA sequence:RefSeq:WP_010142342.1
COORDINATES: similar to AA sequence:RefSeq:WP_019657302.1
COORDINATES: similar to AA sequence:RefSeq:WP_010142344.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018066673.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF018979.2
GO:0005215 - transporter activity [Evidence IEA]
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007006160.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_009573251.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019860007.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183939.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013530365.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183936.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019860003.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011969644.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011842667.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009805447.1
COORDINATES: similar to AA sequence:RefSeq:WP_008332057.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859946.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009805450.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024846.2
FAD/NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016555138.1
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016555136.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: similar to AA sequence:RefSeq:WP_011352076.1
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008839144.1
COORDINATES: similar to AA sequence:RefSeq:WP_006159998.1
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020302198.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015931627.1
COORDINATES: similar to AA sequence:RefSeq:WP_009763679.1
COORDINATES: similar to AA sequence:RefSeq:WP_007756954.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019998371.1
GO:0016787 - hydrolase activity [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018465328.1
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: similar to AA sequence:RefSeq:WP_015405092.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019298514.1
part of the dimethylsulfoniopropionate catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008559368.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008558087.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014880965.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007121094.1
COORDINATES: similar to AA sequence:RefSeq:WP_005864100.1
biotin/lipoate--protein ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009817706.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121098.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121099.1
COORDINATES: similar to AA sequence:RefSeq:WP_011569040.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121101.1
COORDINATES: similar to AA sequence:RefSeq:WP_008279842.1
COORDINATES: similar to AA sequence:RefSeq:WP_011537749.1
COORDINATES: similar to AA sequence:RefSeq:WP_015494326.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008887953.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007121121.1
COORDINATES: similar to AA sequence:RefSeq:WP_009809531.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008227925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008227046.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008227445.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008227552.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008226156.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005848322.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009804129.1
COORDINATES: similar to AA sequence:RefSeq:WP_009823744.1
COORDINATES: similar to AA sequence:RefSeq:WP_009824378.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005848294.1
COORDINATES: similar to AA sequence:RefSeq:WP_008250876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013039011.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007121125.1
COORDINATES: similar to AA sequence:RefSeq:WP_018303041.1
COORDINATES: similar to AA sequence:RefSeq:WP_005853554.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018302910.1
COORDINATES: similar to AA sequence:RefSeq:WP_007804101.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008888138.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009827740.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003528877.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008560431.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF024799.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007800048.1
GO:0004040 - amidase activity [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008280861.1
COORDINATES: similar to AA sequence:RefSeq:WP_008562369.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118306.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118305.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118304.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118303.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF024744.2
GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003526789.1
GO:0047448 - 5-dehydro-4-deoxyglucarate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018634258.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020043477.1
COORDINATES: similar to AA sequence:RefSeq:WP_008227041.1
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF015445.2
COORDINATES: similar to AA sequence:RefSeq:WP_008229252.1
COORDINATES: similar to AA sequence:RefSeq:WP_008225653.1
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: similar to AA sequence:RefSeq:WP_008888002.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121135.1
COORDINATES: similar to AA sequence:RefSeq:WP_017929797.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121316.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009574265.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019407833.1
COORDINATES: similar to AA sequence:RefSeq:WP_006203881.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572098.1
COORDINATES: similar to AA sequence:RefSeq:WP_006203884.1
COORDINATES: similar to AA sequence:RefSeq:WP_007634728.1
COORDINATES: similar to AA sequence:RefSeq:WP_019655232.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572094.1
2,4'-dihydroxyacetophenone dioxygenase family protein
COORDINATES: protein motif:HMM:NF025885.2
XylR N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007796201.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007796203.1
COORDINATES: similar to AA sequence:RefSeq:WP_009826301.1
COORDINATES: similar to AA sequence:RefSeq:WP_008225654.1
COORDINATES: similar to AA sequence:RefSeq:WP_009826303.1
COORDINATES: similar to AA sequence:RefSeq:WP_009826304.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_009831476.1
Tm-1-like ATP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014873197.1
COORDINATES: similar to AA sequence:RefSeq:WP_014873196.1
COORDINATES: similar to AA sequence:RefSeq:WP_014873195.1
COORDINATES: similar to AA sequence:RefSeq:WP_014873194.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008186634.1
COORDINATES: similar to AA sequence:RefSeq:WP_011456631.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005854668.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005854667.1
COORDINATES: similar to AA sequence:RefSeq:WP_005854665.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005854662.1
COORDINATES: similar to AA sequence:RefSeq:WP_005854660.1
COORDINATES: similar to AA sequence:RefSeq:WP_015923186.1
COORDINATES: similar to AA sequence:RefSeq:WP_009563533.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018221378.1
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007700541.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005614109.1
COORDINATES: similar to AA sequence:RefSeq:WP_014753086.1
COORDINATES: similar to AA sequence:RefSeq:WP_017875539.1
lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_007255168.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117684.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117683.1
COORDINATES: similar to AA sequence:RefSeq:WP_013168891.1
COORDINATES: similar to AA sequence:RefSeq:WP_005861791.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_008837179.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023010.2
COORDINATES: similar to AA sequence:RefSeq:WP_010460271.1
COORDINATES: similar to AA sequence:RefSeq:WP_005854951.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005854952.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001127.1
COORDINATES: similar to AA sequence:RefSeq:WP_019856806.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117664.1
COORDINATES: similar to AA sequence:RefSeq:WP_020594562.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015276 - ligand-gated monoatomic ion channel activity [Evidence IEA]
lysine/arginine/ornithine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005861829.1
COORDINATES: similar to AA sequence:RefSeq:WP_008870388.1
COORDINATES: similar to AA sequence:RefSeq:WP_007798854.1
COORDINATES: similar to AA sequence:RefSeq:WP_006206633.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022470.2
COORDINATES: protein motif:HMM:NF037008.2
COORDINATES: similar to AA sequence:RefSeq:WP_013069274.1
COORDINATES: similar to AA sequence:RefSeq:WP_010629272.1
COORDINATES: similar to AA sequence:RefSeq:WP_013069276.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007803020.1
GO:0043819 - precorrin-6A synthase (deacetylating) activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013960596.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011569893.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011048571.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020042788.1
COORDINATES: similar to AA sequence:RefSeq:WP_010137279.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013960591.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006958247.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010137276.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011539533.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010438981.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425633.1
COORDINATES: similar to AA sequence:RefSeq:WP_005982005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803000.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518872.1
COORDINATES: similar to AA sequence:RefSeq:WP_012052066.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009815535.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_019401817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012496777.1
GO:0016020 - membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
COORDINATES: similar to AA sequence:RefSeq:WP_005848762.1
COORDINATES: similar to AA sequence:RefSeq:WP_008884296.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007120134.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005848768.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007426196.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_007118466.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009829509.1
hydantoinase B/oxoprolinase family protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007676276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197104.1
COORDINATES: protein motif:HMM:NF015366.2
COORDINATES: protein motif:HMM:NF014073.2
COORDINATES: similar to AA sequence:RefSeq:WP_007833021.1
COORDINATES: similar to AA sequence:RefSeq:WP_014590889.1