Pseudosulfitobacter pseudonitzschiae strain H46 plasmid unnamed6, complete sequence.
type: Entry
definition: Pseudosulfitobacter pseudonitzschiae strain H46 plasmid unnamed6, complete sequence.
sequence version: NZ_CP054605.1
sequence date: 2023-06-02
sequence: sequence
division: CON
label: NZ_CP054605.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15150473
keyword: RefSeq
source: Pseudosulfitobacter pseudonitzschiae
organism: Pseudosulfitobacter pseudonitzschiae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Pseudosulfitobacter.
reference: 1
references: 20019144
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP054605.1.\nBacteria and source DNA available from China Qingdao Laoshan\nDistrict The first Institute of Oceanography Zheng Li.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CLC NGS Cell v. February-2020\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 103.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/01/2023 23:18:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,846\nCDSs (total) :: 4,793\nGenes (coding) :: 4,747\nCDSs (with protein) :: 4,747\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 3\nPseudo Genes (total) :: 46\nCDSs (without protein) :: 46\nPseudo Genes (ambiguous residues) :: 0 of 46\nPseudo Genes (frameshifted) :: 19 of 46\nPseudo Genes (incomplete) :: 23 of 46\nPseudo Genes (internal stop) :: 9 of 46\nPseudo Genes (multiple problems) :: 4 of 46\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23927
topology: circular
so has quality: SO_0000988
location: 1..23927
location: region:1-23927:1
RO_0002162: 1402135

NZ_CP054605
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15150473
type: BioSample
SIO_000068: biosample

1
title: De novo assembly of human genomes with massively parallel short read sequencing
author: Li, R.
author: Zhu, H.
author: Ruan, J.
author: Qian, W.
author: Fang, X.
author: Shi, Z.
author: Li, Y.
author: Li, S.
author: Shan, G.
author: Kristiansen, K.
author: Yang, H.
author: Wang, J.
journal: Genome Res
volume: 20
issue: 2
pages: 265-272
year: 2010
pubmed: 20019144

20019144
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Hu, T.
journal: Submitted (05-JUN-2020) Ministry of natural resources, The first Institute of Oceanography, ZhongHan Street, QingDao 266100, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23927:1
position: 23927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23927:1:source
so part of: sequence
organism: Pseudosulfitobacter pseudonitzschiae
mol type: genomic DNA
strain: H46
isolation source: shallow sea, symbosis with harmful algal bloom algae
plasmid: unnamed6
country: China: The East China Sea
collection date: 2017-10

1402135
type: Taxonomy
SIO_000068: taxonomy

HT745_RS24180
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS24180
pseudo: true
so part of: sequence
location: complement(join(22825..23927,1..551))
location: region:1-23927:-1
so has part: feature:1-551:-1:exon
so has part: feature:22825-23927:-1:exon
subclass of: SO_0000010

68872862
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23927:-1
position: 23927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-551:-1:exon

position:551:-1
position: 551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22825-23927:-1:exon

position:22825:-1
position: 22825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HT745_RS24180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS24180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013967390.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Eco57I restriction-modification methylase domain-containing protein
SIO_010081: HT745_RS24180
subclass of: SO_0000673
so part of: HT745_RS24180
location: complement(join(22825..23927,1..551))
location: region:1-23927:-1
so has part: feature:1-551:-1:exon
so has part: feature:22825-23927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22825-23927:-1:exon

HT745_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22215
old locus tag: HT745_22220
pseudo: true
so part of: sequence
location: complement(548..1197)
location: region:548-1197:-1
so has part: feature:548-1197:-1:exon
subclass of: SO_0000010

68872470
type: Gene
SIO_000068: ncbigene

position:548:-1
position: 548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197:-1
position: 1197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548-1197:-1:exon

HT745_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22215
old locus tag: HT745_22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014802014.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: N-6 DNA methylase
SIO_010081: HT745_RS22215
subclass of: SO_0000673
so part of: HT745_RS22215
location: complement(548..1197)
location: region:548-1197:-1
so has part: feature:548-1197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548-1197:-1:exon

HT745_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22220
old locus tag: HT745_22225
so part of: sequence
location: complement(1287..1502)
location: region:1287-1502:-1
so has part: feature:1287-1502:-1:exon
subclass of: SO_0000010

68872471
type: Gene
SIO_000068: ncbigene

position:1287:-1
position: 1287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502:-1
position: 1502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287-1502:-1:exon

HT745_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22220
old locus tag: HT745_22225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014529256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKATEFDERFEAGEDMSAHVDWTKARRLNVEAKRVNVDFPTWVVAGLDRQAQKLGITRQALIKMWIAERLE
SIO_010081: HT745_RS22220
subclass of: SO_0000673
so part of: HT745_RS22220
location: complement(1287..1502)
location: region:1287-1502:-1
so has part: feature:1287-1502:-1:exon

WP_037931637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287-1502:-1:exon

HT745_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22225
old locus tag: HT745_22230
pseudo: true
so part of: sequence
location: complement(1489..1751)
location: region:1489-1751:-1
so has part: feature:1489-1751:-1:exon
subclass of: SO_0000010

68872472
type: Gene
SIO_000068: ncbigene

position:1489:-1
position: 1489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751:-1
position: 1751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1489-1751:-1:exon

HT745_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22225
old locus tag: HT745_22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009819765.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BrnT family toxin
SIO_010081: HT745_RS22225
subclass of: SO_0000673
so part of: HT745_RS22225
location: complement(1489..1751)
location: region:1489-1751:-1
so has part: feature:1489-1751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1489-1751:-1:exon

HT745_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22230
old locus tag: HT745_22235
so part of: sequence
location: complement(1909..2157)
location: region:1909-2157:-1
so has part: feature:1909-2157:-1:exon
subclass of: SO_0000010

68872473
type: Gene
SIO_000068: ncbigene

position:1909:-1
position: 1909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2157:-1
position: 2157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1909-2157:-1:exon

HT745_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22230
old locus tag: HT745_22235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016919153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MKKREPAQKMARFYRMAVMPNLFGEWTLYREWGRIGQGGQVRMDWFEDENQAVAALVTTGSLQASARLLDGASAARDVQMIA
SIO_010081: HT745_RS22230
subclass of: SO_0000673
so part of: HT745_RS22230
location: complement(1909..2157)
location: region:1909-2157:-1
so has part: feature:1909-2157:-1:exon

WP_244967025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1909-2157:-1:exon

HT745_RS24435
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS24435
pseudo: true
so part of: sequence
location: complement(2176..2716)
location: region:2176-2716:-1
so has part: feature:2176-2716:-1:exon
subclass of: SO_0000010

71773320
type: Gene
SIO_000068: ncbigene

position:2176:-1
position: 2176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716:-1
position: 2716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176-2716:-1:exon

HT745_RS24435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS24435
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: HT745_RS24435
subclass of: SO_0000673
so part of: HT745_RS24435
location: complement(2176..2716)
location: region:2176-2716:-1
so has part: feature:2176-2716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2176-2716:-1:exon

HT745_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22245
old locus tag: HT745_22250
so part of: sequence
location: complement(2973..4157)
location: region:2973-4157:-1
so has part: feature:2973-4157:-1:exon
subclass of: SO_0000010

68872476
type: Gene
SIO_000068: ncbigene

position:2973:-1
position: 2973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157:-1
position: 4157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2973-4157:-1:exon

HT745_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22245
old locus tag: HT745_22250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDIVTRPAEEISREELYELVWQTPMSKLGAQLATNGPGLAALCRKRQIPTPPLGYWQKKAVGRAPEMPPLPSFEPPQKTSPSIKSARGSGKPQVPASVPSRDAESVAELPPFDEDDESLDHMRALHPKVKAWVAEHRQLQESRRAENRQRSRDFWGGSLPHISDLTARDRYRFRVTSTLFRAIEKQGGQIGEAKLTGKVTFLVSDQELKCVIAEKMSRATKIMEGAGKWTAFPHHHQTGLVSSGFLRVRFDTYVNGRSRDWIETSKKKMAIILPDIVSAIIAAGPLLAEAAREREERHRRYEQEQAERRERQRQQEIDHRRWSRFQDHAENWRERDRLLAFIEELRRRLQIEGDADIEGRPLSDWIVWAEERTHALDPFQNGLKGFFEAISSD
SIO_010081: HT745_RS22245
subclass of: SO_0000673
so part of: HT745_RS22245
location: complement(2973..4157)
location: region:2973-4157:-1
so has part: feature:2973-4157:-1:exon

WP_037931648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2973-4157:-1:exon

HT745_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22250
old locus tag: HT745_22255
so part of: sequence
location: 4269..4520
location: region:4269-4520:1
so has part: feature:4269-4520:1:exon
subclass of: SO_0000010

68872477
type: Gene
SIO_000068: ncbigene

position:4269:1
position: 4269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4520:1
position: 4520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4269-4520:1:exon

HT745_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22250
old locus tag: HT745_22255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006448404.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MDVMTYSDARAQLKGVMDRAIHDKQEIVVTRKKGESVVVVSLETWNAVNETLHLLSTPKNASRLRASIAQLDAGTGEERELTE
SIO_010081: HT745_RS22250
subclass of: SO_0000673
so part of: HT745_RS22250
location: 4269..4520
location: region:4269-4520:1
so has part: feature:4269-4520:1:exon

WP_037931651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4269-4520:1:exon

HT745_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22255
old locus tag: HT745_22260
so part of: sequence
location: 4517..4783
location: region:4517-4783:1
so has part: feature:4517-4783:1:exon
subclass of: SO_0000010

68872478
type: Gene
SIO_000068: ncbigene

position:4517:1
position: 4517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4783:1
position: 4783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4517-4783:1:exon

HT745_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22255
old locus tag: HT745_22260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003613166.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Txe/YoeB family addiction module toxin
translation: MKLVFSDQAWEDYQYWVSTNDKVRDRINELIKQCKRTPFKGTGKPEPLKGDLTGWWSRRISQEDRMVYRVSGTGDGQSLEIAQLRFHY
SIO_010081: HT745_RS22255
subclass of: SO_0000673
so part of: HT745_RS22255
location: 4517..4783
location: region:4517-4783:1
so has part: feature:4517-4783:1:exon

WP_037931654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4517-4783:1:exon

HT745_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22260
old locus tag: HT745_22265
so part of: sequence
location: complement(4844..5662)
location: region:4844-5662:-1
so has part: feature:4844-5662:-1:exon
subclass of: SO_0000010

68872479
type: Gene
SIO_000068: ncbigene

position:4844:-1
position: 4844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5662:-1
position: 5662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4844-5662:-1:exon

HT745_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22260
old locus tag: HT745_22265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MLNNHKQFLAWRRQVFVRNPHRDLNALYTGLKQRSGVYLIGCAEEIVYIGQSWDLTERPIDSLGRFYHRVSDVSLPWSLALAPCPPDEMHERESTAIRSFAPKFNTSIPSIPASEGRMPEIIGYAAVFQDQLSAGGAFDEKNLRRQMERAAENPSPPWRQGKQRRKTGKREPRPELQPLDPPTQLTGDSLREAWQRYGVPSDGALIYPINLCDDGSVVTRDGEIIGTWSMDQYEAPSFTPDDAIIPLFEAPLVGLLCMRIREWHESKTGEKL
SIO_010081: HT745_RS22260
subclass of: SO_0000673
so part of: HT745_RS22260
location: complement(4844..5662)
location: region:4844-5662:-1
so has part: feature:4844-5662:-1:exon

WP_037931655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4844-5662:-1:exon

HT745_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22265
old locus tag: HT745_22270
so part of: sequence
location: complement(5763..6389)
location: region:5763-6389:-1
so has part: feature:5763-6389:-1:exon
subclass of: SO_0000010

68872480
type: Gene
SIO_000068: ncbigene

position:5763:-1
position: 5763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6389:-1
position: 6389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5763-6389:-1:exon

HT745_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22265
old locus tag: HT745_22270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010399429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase
translation: MPSSYEYGTFANYSPRGSSELSVTSRKACGAIKAGRVNVIASTVPHLQDSKADALRPFLGPDVTLVPVPRSAPLPDGALWPAKVICDVLHEHGFGQDVQTYLKRTRAIPRSSNSPAAERPLVPIHLESIEAERPFFVPNKITIVDDVLTMGRTSFACAELIRAVCPDAEIRIFAMIRTQGLQEDIEKIVDPAIGTIIGYPSGKTHRDP
SIO_010081: HT745_RS22265
subclass of: SO_0000673
so part of: HT745_RS22265
location: complement(5763..6389)
location: region:5763-6389:-1
so has part: feature:5763-6389:-1:exon

WP_234973794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5763-6389:-1:exon

HT745_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22270
old locus tag: HT745_22275
so part of: sequence
location: complement(6373..7059)
location: region:6373-7059:-1
so has part: feature:6373-7059:-1:exon
subclass of: SO_0000010

68872481
type: Gene
SIO_000068: ncbigene

position:6373:-1
position: 6373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7059:-1
position: 7059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6373-7059:-1:exon

HT745_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22270
old locus tag: HT745_22275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010399431.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-processing protein DprA
translation: MHAELRTREALGPFGPVEEKNAPDVLYTAGDTALLTEGSRVAIVGSRKATPDGIKRAQAVTRALVQQGIIVVSGLAEGIDTVAHRTAIEEGGRTIAVLGTPLSKAYPATNAGLLEEIKRDHLAISQFPEGYPGKSENFPRRNRTMALICDATIVIEASEKSGTRHQGWEAIRLGRDLYLLENVATNPNLTWPKQLIEYGAQILRREDLPDILLDIPNYTAGGVRAFEL
SIO_010081: HT745_RS22270
subclass of: SO_0000673
so part of: HT745_RS22270
location: complement(6373..7059)
location: region:6373-7059:-1
so has part: feature:6373-7059:-1:exon

WP_037931693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6373-7059:-1:exon

HT745_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22275
old locus tag: HT745_22280
so part of: sequence
location: complement(7166..7465)
location: region:7166-7465:-1
so has part: feature:7166-7465:-1:exon
subclass of: SO_0000010

68872482
type: Gene
SIO_000068: ncbigene

position:7166:-1
position: 7166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7465:-1
position: 7465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7166-7465:-1:exon

HT745_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22275
old locus tag: HT745_22280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKTFSAAPKPKQQPTDDQILAFERGGAGHDTTRADKPVAKTMPDEPTKRLSLDLPASLHTRFKTACSATDRKMVGELQAFIEQRTQELEEDAGITRK
SIO_010081: HT745_RS22275
subclass of: SO_0000673
so part of: HT745_RS22275
location: complement(7166..7465)
location: region:7166-7465:-1
so has part: feature:7166-7465:-1:exon

WP_132953151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7166-7465:-1:exon

HT745_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
gene: parA
locus tag: HT745_RS22280
old locus tag: HT745_22285
so part of: sequence
location: complement(7410..8081)
location: region:7410-8081:-1
so has part: feature:7410-8081:-1:exon
subclass of: SO_0000010

68872483
type: Gene
SIO_000068: ncbigene

position:7410:-1
position: 7410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8081:-1
position: 8081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410-8081:-1:exon

HT745_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
gene: parA
locus tag: HT745_RS22280
old locus tag: HT745_22285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010399435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MIISFLNQKGGVGKTTLSVNVAGCLARQGHRVLLIDADKQGSATTWASLREDAPFQVVSMARANMARDALKLAQDYTHTIIDGPPHAEEIARSCIVASDFVALPIEPSGLSTWASDLTVRQVKEAQEFKPSLKCGFVVSRKIGKTVIGRDIRNMAAEAGLPILASEIEQRVAFAEGMTMGQTIFEWAGDSNAAREINQLTKEIERYVEEDIFGGSEAEAAANG
SIO_010081: HT745_RS22280
subclass of: SO_0000673
so part of: HT745_RS22280
location: complement(7410..8081)
location: region:7410-8081:-1
so has part: feature:7410-8081:-1:exon

WP_037931658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7410-8081:-1:exon

HT745_RS22285
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22285
old locus tag: HT745_22290
so part of: sequence
location: complement(8141..9169)
location: region:8141-9169:-1
so has part: feature:8141-9169:-1:exon
subclass of: SO_0000010

68872484
type: Gene
SIO_000068: ncbigene

position:8141:-1
position: 8141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9169:-1
position: 9169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8141-9169:-1:exon

HT745_RS22285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22285
old locus tag: HT745_22290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911250.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTNARSPLLPDRHPQKDLFVCDIVDAVPKGDMASMEHPVFTLSTKPDMKPRRYQNGDNSIEVSPSRYGLATVHDRDVLIYCISQCMAALNEGRKVNRSMRFKAHDLLVATNRQTSGQGYQLLKDALRRLQGTQIETNIRQGGKEYFKVFGLIESAEIVRETRDGRMQDVEITLSDWVFDAIENNHVLTLNKQYFFLRKPLERRLYELARKHCGAQPKWKCGLELLRDKCGSGSTTKEFRRLISKIIEDDAVHDHLPDYTMSIESDNVVFRPKGAEAVIAPSFLALRFRKPDTHDEARRLAPGWDVYVLENEWRSWVHDKAIDVKDADKHFLAFCNKRGAYQN
SIO_010081: HT745_RS22285
subclass of: SO_0000673
so part of: HT745_RS22285
location: complement(8141..9169)
location: region:8141-9169:-1
so has part: feature:8141-9169:-1:exon

WP_037931660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8141-9169:-1:exon

HT745_RS22290
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22290
old locus tag: HT745_22295
so part of: sequence
location: complement(9487..11331)
location: region:9487-11331:-1
so has part: feature:9487-11331:-1:exon
subclass of: SO_0000010

68872485
type: Gene
SIO_000068: ncbigene

position:9487:-1
position: 9487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11331:-1
position: 11331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9487-11331:-1:exon

HT745_RS22290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22290
old locus tag: HT745_22295
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSFVLEARHWVIMIGAVILAAAAMILAPQAVAIYPMTTYAFPIIAVATIFDTLGTTAERLRWSLKLLAWVCLCAAALTALTPLRGPLSDILATIQAWTGAGWPLPRAIWEGLKGLARYSDPQKQAMAISFALGAFGVAVAVSTPLVAIFNPRIGRNRKSRTGPWQAGWMDPRDVAQLKRNKTGLPLALHKGKLLRYVKNGAKGWRGGHHLVVSGTRGGKGVSAVIPAILDHQGPVVVLDIKGENFAVTRRHREELGRKVAVLNPFGLVEDGKDQFNPLDYIRPHELARDVALVADGLVKPEQGDGAHFSEMARQLVAAAIEVIVTQEEPNRRNLIAVADLLLTANLDGTLEAWAENADLVGHRPAQTAATILRAGDRERGSIQTAVSKAFEWMQSDNMRHFLAGSSFRMDDLLDDQVDLFIVVPLDQVDKQAIFMRLFINLVLGTVVRQDGRRKVKAPILLVLDEFVRMGRMEQIMNIANVAAGAGVEALFVTQDTGQVEKAYGPNDARSIFGSCITKRVFNLNDIETAEWAARHLGENTVYSQQIREGKAPNEGRDFSYSEQRQKLMTAEQITGMKADDLLLLVGNRNPLKAKQNVYFKSKLYRGRFDQNPLS
SIO_010081: HT745_RS22290
subclass of: SO_0000673
so part of: HT745_RS22290
location: complement(9487..11331)
location: region:9487-11331:-1
so has part: feature:9487-11331:-1:exon

WP_051694707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9487-11331:-1:exon

HT745_RS22295
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22295
old locus tag: HT745_22300
so part of: sequence
location: complement(11328..11615)
location: region:11328-11615:-1
so has part: feature:11328-11615:-1:exon
subclass of: SO_0000010

68872486
type: Gene
SIO_000068: ncbigene

position:11328:-1
position: 11328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11615:-1
position: 11615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11328-11615:-1:exon

HT745_RS22295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22295
old locus tag: HT745_22300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQSRHPDARIEELTAKKAQLDAQIAALDARRRLAQKKDEDRLKWLLGTLVFDRLSAEPALQSIVRRDLPDRLTQRDRDRGLWQILFPDTQEDRS
SIO_010081: HT745_RS22295
subclass of: SO_0000673
so part of: HT745_RS22295
location: complement(11328..11615)
location: region:11328-11615:-1
so has part: feature:11328-11615:-1:exon

WP_037931669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11328-11615:-1:exon

HT745_RS22300
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
gene: mobQ
locus tag: HT745_RS22300
old locus tag: HT745_22305
so part of: sequence
location: 11853..13136
location: region:11853-13136:1
so has part: feature:11853-13136:1:exon
subclass of: SO_0000010

68872487
type: Gene
SIO_000068: ncbigene

position:11853:1
position: 11853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13136:1
position: 13136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11853-13136:1:exon

HT745_RS22300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
gene: mobQ
locus tag: HT745_RS22300
old locus tag: HT745_22305
inference: COORDINATES: protein motif:HMM:NF041496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHLSAKVISRAGGRSSVAAAAYRTAGRLRDERQGLEHDYSRKGGVVHSEIMAPENAPDWMCDRDQLWNAVEAVEKRRDAQLAREIEVALPRELDRGERLELLRGFVQREFVDRGMIADVAVHEGKARDGQGQPHAHVMLTMRELTGEGFGKKDRSWNAPDLLMGWREAWARDANTALERAGRSERIDHRSLDLQRTEAEQQVERARGGGQEELALEHEKKVVELSREPEPKIGPSANAQEKRGIVTERGDAFRATQARNAQRLELGWRQLELRLELMERGRAFIATARERLDQLWGRAEAAMSRIKERVMGEVERPQAGAERGDMDARRAAVLGRDVDRAEVQAPDVGRERATPDDPDRERLNAILGRGRDIGLERDAAAVERDIVARDGEGRDQGRRDDILGRGRDNASERGQGRDRDRDRER
SIO_010081: HT745_RS22300
subclass of: SO_0000673
so part of: HT745_RS22300
location: 11853..13136
location: region:11853-13136:1
so has part: feature:11853-13136:1:exon

WP_081855499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11853-13136:1:exon

HT745_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22305
old locus tag: HT745_22310
so part of: sequence
location: 13163..13555
location: region:13163-13555:1
so has part: feature:13163-13555:1:exon
subclass of: SO_0000010

68872488
type: Gene
SIO_000068: ncbigene

position:13163:1
position: 13163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13555:1
position: 13555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13163-13555:1:exon

HT745_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22305
old locus tag: HT745_22310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKWRVVLDAVKAPTCGDWVAVSGLCPGEEETARFLFLDGTEADGFTFLDAPQEQVGDSPSGEQVPWLHFPDCMEIVGVERQDWRPPSWPHDKTLWRLTLVSLPSNVEFEKRLLIGQESRRGVLSRLGLR
SIO_010081: HT745_RS22305
subclass of: SO_0000673
so part of: HT745_RS22305
location: 13163..13555
location: region:13163-13555:1
so has part: feature:13163-13555:1:exon

WP_143186820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13163-13555:1:exon

HT745_RS22310
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22310
old locus tag: HT745_22315
so part of: sequence
location: complement(13588..13875)
location: region:13588-13875:-1
so has part: feature:13588-13875:-1:exon
subclass of: SO_0000010

68872489
type: Gene
SIO_000068: ncbigene

position:13588:-1
position: 13588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13875:-1
position: 13875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13588-13875:-1:exon

HT745_RS22310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22310
old locus tag: HT745_22315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013529344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3892 domain-containing protein
translation: MPQDHQITCIIPDGADSDRRIDSIGGATGSKSGGPWCIKLDVAIKGIEDGTWRFWTSVNGNSVWVIIATRNGKKYLKTEADGAEPNNLLSLPRCK
SIO_010081: HT745_RS22310
subclass of: SO_0000673
so part of: HT745_RS22310
location: complement(13588..13875)
location: region:13588-13875:-1
so has part: feature:13588-13875:-1:exon

WP_037275356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13588-13875:-1:exon

HT745_RS22315
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22315
old locus tag: HT745_22320
so part of: sequence
location: complement(13978..14241)
location: region:13978-14241:-1
so has part: feature:13978-14241:-1:exon
subclass of: SO_0000010

68872490
type: Gene
SIO_000068: ncbigene

position:13978:-1
position: 13978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14241:-1
position: 14241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13978-14241:-1:exon

HT745_RS22315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22315
old locus tag: HT745_22320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019950167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3892 domain-containing protein
translation: MADRKVTASGKDKDGDITKLCKSGEAWSPRLKADAIRDIENGTHTYYVQQAGTSRVDITVVNGTTGKYLRSTADKSSSNNLDNLPDC
SIO_010081: HT745_RS22315
subclass of: SO_0000673
so part of: HT745_RS22315
location: complement(13978..14241)
location: region:13978-14241:-1
so has part: feature:13978-14241:-1:exon

WP_037931675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13978-14241:-1:exon

HT745_RS22320
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22320
old locus tag: HT745_22325
so part of: sequence
location: 14349..14672
location: region:14349-14672:1
so has part: feature:14349-14672:1:exon
subclass of: SO_0000010

68872491
type: Gene
SIO_000068: ncbigene

position:14349:1
position: 14349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14672:1
position: 14672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14349-14672:1:exon

HT745_RS22320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22320
old locus tag: HT745_22325
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSEKFGEKLRKIRTSKNMTQEELATVLGSSKAYVWQLENKKNAKPSAELLLKIANHFGASPEFFLDDTQDEPSDRQIEDAFFRKFHKLSENDKRTIERIVSGFDDDD
SIO_010081: HT745_RS22320
subclass of: SO_0000673
so part of: HT745_RS22320
location: 14349..14672
location: region:14349-14672:1
so has part: feature:14349-14672:1:exon

WP_037931678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14349-14672:1:exon

HT745_RS22325
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22325
old locus tag: HT745_22330
so part of: sequence
location: 14683..15450
location: region:14683-15450:1
so has part: feature:14683-15450:1:exon
subclass of: SO_0000010

68872492
type: Gene
SIO_000068: ncbigene

position:14683:1
position: 14683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15450:1
position: 15450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14683-15450:1:exon

HT745_RS22325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22325
old locus tag: HT745_22330
inference: COORDINATES: protein motif:HMM:NF017885.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MKEANRLTRLWQDHGPNTYPLDISKLIDGALQNSDFGGELKTKIGSYDSFEGCLVRTKNTDKWTILLNSEIENKRRQRFTYAHELGHFMCHRGLRDRFEDSDDTLNDFRDKIETEANVFASWLLMPANLLRDEFSGIGWNTDSLCEIGNRFECSLQASALRFVGLSSKPVAFIVSRDGMVVWGSKSKSAPYISAFCFGDELPKASHALTAHLNGESCTLPQDSGFAWNEFRSANESQYFDYSGRGYQYTCIEFVG
SIO_010081: HT745_RS22325
subclass of: SO_0000673
so part of: HT745_RS22325
location: 14683..15450
location: region:14683-15450:1
so has part: feature:14683-15450:1:exon

WP_073194614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14683-15450:1:exon

HT745_RS22330
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22330
old locus tag: HT745_22335
so part of: sequence
location: 15879..16763
location: region:15879-16763:1
so has part: feature:15879-16763:1:exon
subclass of: SO_0000010

68872493
type: Gene
SIO_000068: ncbigene

position:15879:1
position: 15879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16763:1
position: 16763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15879-16763:1:exon

HT745_RS22330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22330
old locus tag: HT745_22335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011536558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTAEKFDVYSHVTNQIIAQIEAGTPPWRKPWTGGGASVSLPERFNGEAYRGINILMLWATAMAKDYSSARWMTFNQAKQLGGHVRKGEKSATVVKYGTVEREDENGEERQIPYAKAYRVFNADQIEGLPAEFYILPDPPRDLGTLADPALEAFFAASDAQIDSTEEPRAYYNIKTDRIHMPPIATFHRAAGYYGTLAHELTHWTGATKRLDRLGRFNDRKAYAFEELVAEIGNCMLCAQIGVEPEFDQSAAYVEGWLEAMKEDSRAIFRAASEAQKAVDYIMDRTARADRMAAE
SIO_010081: HT745_RS22330
subclass of: SO_0000673
so part of: HT745_RS22330
location: 15879..16763
location: region:15879-16763:1
so has part: feature:15879-16763:1:exon

WP_073194608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15879-16763:1:exon

HT745_RS22335
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22335
old locus tag: HT745_22340
so part of: sequence
location: 17282..17449
location: region:17282-17449:1
so has part: feature:17282-17449:1:exon
subclass of: SO_0000010

68872494
type: Gene
SIO_000068: ncbigene

position:17282:1
position: 17282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17449:1
position: 17449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17282-17449:1:exon

HT745_RS22335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22335
old locus tag: HT745_22340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYDTDETSQRGTRETKRKRKPTWKSRLLKGAFWVAWGMGKLFDLIEWLSRLSGD
SIO_010081: HT745_RS22335
subclass of: SO_0000673
so part of: HT745_RS22335
location: 17282..17449
location: region:17282-17449:1
so has part: feature:17282-17449:1:exon

WP_156024903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17282-17449:1:exon

HT745_RS22340
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22340
old locus tag: HT745_22345
so part of: sequence
location: 17496..17801
location: region:17496-17801:1
so has part: feature:17496-17801:1:exon
subclass of: SO_0000010

68872495
type: Gene
SIO_000068: ncbigene

position:17496:1
position: 17496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17801:1
position: 17801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17496-17801:1:exon

HT745_RS22340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22340
old locus tag: HT745_22345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019368207.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLGEALRLIRVFHDLKQNELAERLDISQSHLSDIERCRKVPSQEIVARYAEEFDLPVSSIWFFDEKLTEGTTPGAIEKARGVVADKILDFLRMIERKRASS
SIO_010081: HT745_RS22340
subclass of: SO_0000673
so part of: HT745_RS22340
location: 17496..17801
location: region:17496-17801:1
so has part: feature:17496-17801:1:exon

WP_037240913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17496-17801:1:exon

HT745_RS22345
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22345
old locus tag: HT745_22350
so part of: sequence
location: 17798..18688
location: region:17798-18688:1
so has part: feature:17798-18688:1:exon
subclass of: SO_0000010

68872496
type: Gene
SIO_000068: ncbigene

position:17798:1
position: 17798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18688:1
position: 18688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17798-18688:1:exon

HT745_RS22345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22345
old locus tag: HT745_22350
EC number: 2.7.7.49
inference: COORDINATES: protein motif:HMM:NF012307.2
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse transcriptase family protein
translation: MTKRRDKSYALDQCALYRCSTRKKLFKLLQTSSEKFAELKAAPDLYKPLRKKKKDGTFRPVLAPRGDLKRIQRRIGELLLRVETPDYLMSPVRGRSNIDNAARHRGAAAFHLLDIEDFYPSCTASKVAWFFGKYLGCPPDVVKVLLDLTTLNGVLPAGSPASPSLAFWAYADMWDEIDQLTRDAGCQVSVYVDDITVSGQSVPGVLIHAIKERLAHHGHSFKASKEIGQINAPVVVTGVVVRDRTLLMPNVQHLERHKLRAEVAKLPEGYEKAQKMASLIGREGTERQILARNNFH
SIO_010081: HT745_RS22345
subclass of: SO_0000673
so part of: HT745_RS22345
location: 17798..18688
location: region:17798-18688:1
so has part: feature:17798-18688:1:exon

WP_037931623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17798-18688:1:exon

HT745_RS22350
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22350
old locus tag: HT745_22355
so part of: sequence
location: 18708..19673
location: region:18708-19673:1
so has part: feature:18708-19673:1:exon
subclass of: SO_0000010

68872497
type: Gene
SIO_000068: ncbigene

position:18708:1
position: 18708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19673:1
position: 19673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18708-19673:1:exon

HT745_RS22350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22350
old locus tag: HT745_22355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011157154.1
GO function: GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toll/interleukin-1 receptor domain-containing protein
translation: MTTVFFSYCHADEALRDQLERQLRILQRQGLIETWHDRRIEAGQDFAGEIDAHIEADEIILLLVSPDFLNSDYCYEIEMTRALERHKAGEAIVIPVILRDCLWHGAPFGKLMATPTDGRPVTQWPDIDHAFRLVAEAVQAAAKRIGNSQAVTRPSAAPSNIQNTQSVNRSTPDQVIRSSNLRVAKTFTDRDRDAFQTEAFDFMAKYFENSLSELSVRNPEIDGSFRRLDANRFSAVAYHNGQAASRCTVFMGGRHMGGIAYTATENADTNGFNENLTVEADEQTLYLRSMGMAHFGQNRDQKLTFEGAAETYWQMFVQPLQ
SIO_010081: HT745_RS22350
subclass of: SO_0000673
so part of: HT745_RS22350
location: 18708..19673
location: region:18708-19673:1
so has part: feature:18708-19673:1:exon

WP_037931625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18708-19673:1:exon

HT745_RS22355
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22355
old locus tag: HT745_22360
so part of: sequence
location: complement(19724..20230)
location: region:19724-20230:-1
so has part: feature:19724-20230:-1:exon
subclass of: SO_0000010

68872498
type: Gene
SIO_000068: ncbigene

position:19724:-1
position: 19724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20230:-1
position: 20230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19724-20230:-1:exon

HT745_RS22355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22355
old locus tag: HT745_22360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVLFSTTLKPMADFEVGEIGLCNFGRGAELAMLVIKLDDDLGFVTMHDQGDDLFSIHYVEHRPDLCLSYGQNWKLVLDPTGDIQMGGYASPEIGDIIMWNGAYGLCAFQSRGPMKSKVNCPLTGTKPDRSPIEAVFRTWKIVLNENDPETGLAPVIFRHPAKQVSQP
SIO_010081: HT745_RS22355
subclass of: SO_0000673
so part of: HT745_RS22355
location: complement(19724..20230)
location: region:19724-20230:-1
so has part: feature:19724-20230:-1:exon

WP_073194611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19724-20230:-1:exon

HT745_RS22360
type: Gene
subclass of: SO_0000704
RO_0002162: 1402135
locus tag: HT745_RS22360
old locus tag: HT745_22365
so part of: sequence
location: complement(20292..22832)
location: region:20292-22832:-1
so has part: feature:20292-22832:-1:exon
subclass of: SO_0000010

68872499
type: Gene
SIO_000068: ncbigene

position:20292:-1
position: 20292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22832:-1
position: 22832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20292-22832:-1:exon

HT745_RS22360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1402135
locus tag: HT745_RS22360
old locus tag: HT745_22365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013899298.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MHKPTIDDILSPKPEARPRIYAYSIADGAHEGLLKVGQTTRDVKRRVAEQLRTAAITNFRIELDEPAERDDGTIFTDHEVRAALIRKGIENTSLEWMRCTLADVHTVLTELRTGLRFSGTHHQTFPMRREQAEAVRQTHAYYHSRWEEDMHAVPRFLWNAKMRFGKTFTSYQLAKKMGAKRVLVVTFKPAVEDAWQSDLENHADFDGWQYLSVKTGGDPTQIDRNKPVVYFGSFQDLLGRDARGNIKAKNEWLHTENWDLVVFDEYHFGAWRETAKELFAGEEDEIAREEARLEDAKKLKDRIADLQEPLEPETEFLPITTKAYLYLSGTPFKALSTGEFIEEQIFNWTYTDEQRAKAAFAAAHPDQWNPYGSLPQMRLLTYQMPDELLAIASAGEFDEFDLNEFFAATGTGSKAQFKHKSDVQKWLDIIRGQYAPGAVDSLKTGTRPPFPYSDVRLLPYLQHSFWFLPNVAACHAMENLLTERQNTFWHEYKVISAAGASAGIGLEALPPVRRAIGSGFDSKSITLSCGKLTTGVTVKQWSSILMLRNLKSPETYFQAAFRVQSPWSIKNPNGDNPHEEEILKPVCFMFDFAPTRALRQLSEYGIGLSPNEANPENAVKELVSFLPVLAYDGANMYQVDAGGILDIAMAGTSATLLARKWESALLVNVDNETLRKIMDNPEAMAAVERIEGWRALGDNVIETIINKSEKVKDLKAKAKERDLTPKEKKELSAEEKEYKSARKLVQEKLIKFATRIPAFMYLTDFRENTLQDVITKLEPELFRTVTGLTVQDFHLLVRLKVFNTEQMNQAVFAFRRYEDASLNYTGIDSHEGLSSYGLYNTVVARE
SIO_010081: HT745_RS22360
subclass of: SO_0000673
so part of: HT745_RS22360
location: complement(20292..22832)
location: region:20292-22832:-1
so has part: feature:20292-22832:-1:exon

WP_037931628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20292-22832:-1:exon