Bythopirellula goksoeyrii strain Pr1d chromosome.
Bacteria; Planctomycetota; Planctomycetia; Pirellulales; Lacipirellulaceae; Bythopirellula.
Deep-cultivation of Planctomycetes and their phenomic and genomic characterization uncovers novel biology
Submitted (13-AUG-2019) Microbiology, Radboud Universiteit Nijmegen, Heyendaalseweg 135, Nijmegen 6525AJ, Netherlands
REFSEQ INFORMATION: The reference sequence is identical to\nCP042913.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from Lise.Ovreas@uib.no.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.7.0 & Velvet v. 1.2.10\nGenome Coverage :: 224x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/26/2022 07:54:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,116\nCDSs (total) :: 5,040\nGenes (coding) :: 5,001\nCDSs (with protein) :: 5,001\nGenes (RNA) :: 76\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 39\nCDSs (without protein) :: 39\nPseudo Genes (ambiguous residues) :: 0 of 39\nPseudo Genes (frameshifted) :: 3 of 39\nPseudo Genes (incomplete) :: 33 of 39\nPseudo Genes (internal stop) :: 7 of 39\nPseudo Genes (multiple problems) :: 3 of 39\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##
COORDINATES: protein motif:HMM:NF012529.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008680327.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_008703649.1
COORDINATES: protein motif:HMM:NF016167.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007011060.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654806.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654805.1
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653928.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007332721.1
COORDINATES: protein motif:HMM:NF023583.2
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912743.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014232.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102049.1
GO:0016301 - kinase activity [Evidence IEA]
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655678.1
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF019499.2
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653002.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007336518.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_001052031.1
COORDINATES: similar to AA sequence:RefSeq:WP_007330016.1
COORDINATES: protein motif:HMM:NF015657.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007328350.1
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105418.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00367.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651965.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_007326150.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913548.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913552.1
COORDINATES: protein motif:HMM:NF013097.2
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007327223.1
COORDINATES: protein motif:HMM:NF014305.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_007332339.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF019231.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912708.1
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009099946.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF017003.2
Lpg1974 family pore-forming outer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_007338941.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912294.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011119424.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652185.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912757.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652142.1
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_002651125.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008700602.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF016915.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_000626422.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - cellular amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651780.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF025697.2
COORDINATES: protein motif:HMM:NF013974.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652223.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_009101664.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:TIGR04256.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912643.1
COORDINATES: similar to AA sequence:RefSeq:WP_011122681.1
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008705845.1
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913645.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913644.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_007328455.1
COORDINATES: protein motif:HMM:NF015898.2
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF037982.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911191.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008700333.1
COORDINATES: protein motif:HMM:NF024985.2
COORDINATES: protein motif:HMM:NF022229.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: protein motif:HMM:NF017932.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911109.1
COORDINATES: protein motif:HMM:NF016972.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017964.2
COORDINATES: protein motif:HMM:TIGR02595.1
PEP-CTERM sorting domain-containing protein
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF038117.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011121867.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651629.1
COORDINATES: similar to AA sequence:RefSeq:WP_007330882.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652416.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_008679168.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654629.1
COORDINATES: similar to AA sequence:RefSeq:WP_009093655.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912954.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913397.1
COORDINATES: similar to AA sequence:RefSeq:WP_007333445.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913402.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_012913404.1
coproporphyrinogen-III oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008663443.1
COORDINATES: protein motif:HMM:NF028046.2
COORDINATES: protein motif:HMM:TIGR02136.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651018.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_002653921.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_008699713.1
COORDINATES: protein motif:HMM:NF014675.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF015647.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: protein motif:HMM:NF027716.2
COORDINATES: protein motif:HMM:NF026756.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611756.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF016906.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF019225.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909472.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651507.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651505.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF027681.2
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007333994.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_002655260.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: similar to AA sequence:RefSeq:WP_008689684.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002651642.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651203.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913194.1
COORDINATES: protein motif:HMM:NF024821.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910928.1
COORDINATES: protein motif:HMM:NF019268.2
COORDINATES: protein motif:HMM:NF040521.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: protein motif:HMM:TIGR02353.1
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014638.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_009100677.1
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911386.1
COORDINATES: protein motif:HMM:NF025885.2
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF021371.2
COORDINATES: protein motif:HMM:NF021758.2
COORDINATES: similar to AA sequence:RefSeq:WP_007330923.1
pyrimidine/purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_008706884.1
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: similar to AA sequence:RefSeq:WP_008660096.1
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:TIGR02604.1
COORDINATES: protein motif:HMM:NF017496.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911094.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674243.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_008706669.1
COORDINATES: protein motif:HMM:NF019221.2
BBP7 family outer membrane beta-barrel protein
COORDINATES: similar to AA sequence:RefSeq:WP_012911920.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912738.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012911436.1
COORDINATES: protein motif:HMM:NF013727.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011123706.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009098611.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008705998.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652519.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: similar to AA sequence:RefSeq:WP_008684780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008672767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912056.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_012912922.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651513.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912849.1
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: similar to AA sequence:RefSeq:WP_008674853.1
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002652279.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF025141.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652439.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024981.2
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: similar to AA sequence:RefSeq:WP_008254787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913664.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008700192.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF025446.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_008660081.1
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: similar to AA sequence:RefSeq:WP_007327447.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_008707718.1
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913262.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008665743.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913259.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_007326458.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913255.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913254.1
flagellar hook-basal body complex protein
COORDINATES: protein motif:HMM:NF015896.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913249.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:NF026192.2
COORDINATES: protein motif:HMM:NF013664.2
COORDINATES: protein motif:HMM:TIGR00205.1
GO:0005198 - structural molecule activity [Evidence IEA]
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_009097673.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651445.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651444.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913241.1
COORDINATES: protein motif:HMM:NF016985.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_008699360.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008658626.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104237.1
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF019265.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:TIGR02601.1
autotransporter-associated beta strand repeat-containing protein
COORDINATES: protein motif:HMM:TIGR04393.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652058.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651922.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF012551.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008699653.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF033564.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652270.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF012402.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009098194.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698516.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_008656523.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650166.1
COORDINATES: similar to AA sequence:RefSeq:WP_008671011.1
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF019223.2
PSD1 and planctomycete cytochrome C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008707758.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652071.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007338657.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:NF027224.2
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652061.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655056.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_008692610.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF038123.1
COORDINATES: protein motif:HMM:TIGR02943.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698104.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007338838.1
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652043.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652041.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_012912761.1
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652038.1
cytochrome bc complex cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008700565.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015962.2
GO:0050532 - 2-phosphosulfolactate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008704170.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_002652306.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910313.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
putative 4-hydroxybenzoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009100043.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910269.1
COORDINATES: protein motif:HMM:TIGR03122.1
GO:0018493 - formylmethanofuran dehydrogenase activity [Evidence IEA]
formylmethanofuran dehydrogenase subunit C
COORDINATES: protein motif:HMM:TIGR03129.1
formylmethanofuran dehydrogenase subunit B
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008703398.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_011353752.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008693814.1
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913287.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008655020.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652423.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:NF019236.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: protein motif:HMM:NF025224.2
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF039847.1
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655059.1
COORDINATES: protein motif:HMM:NF025465.2
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF025934.2
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: protein motif:HMM:NF024126.2
COORDINATES: similar to AA sequence:RefSeq:WP_008708973.1
COORDINATES: similar to AA sequence:RefSeq:WP_007327905.1
COORDINATES: protein motif:HMM:NF018561.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011120230.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008672688.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009094239.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651069.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
COORDINATES: protein motif:HMM:NF003640.0
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909069.1
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012910512.1
COORDINATES: protein motif:HMM:NF014686.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911230.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_009097066.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650030.1
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF016005.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910358.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650040.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_002655888.1
COORDINATES: protein motif:HMM:TIGR03008.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105010.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:TIGR03009.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909347.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104190.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: similar to AA sequence:RefSeq:WP_007340782.1
COORDINATES: protein motif:HMM:NF024803.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019266.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_007329625.1
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_012911103.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008693753.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF038001.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679280.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF027363.2
COORDINATES: protein motif:HMM:NF013661.2
peptidoglycan recognition family protein
COORDINATES: protein motif:HMM:NF016141.2
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF005122.0
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
vitamin B12-dependent ribonucleotide reductase
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_007339679.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008679090.1
COORDINATES: protein motif:HMM:NF024204.2
COORDINATES: similar to AA sequence:RefSeq:WP_007325148.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655414.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655413.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008697922.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697918.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651759.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_008668226.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018961.2
COORDINATES: protein motif:HMM:TIGR02291.1
COORDINATES: protein motif:HMM:NF025760.2
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: similar to AA sequence:RefSeq:WP_007326931.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909741.1
COORDINATES: protein motif:HMM:NF019590.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654476.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695078.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650526.1
COORDINATES: protein motif:HMM:NF020621.2
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF013964.2
HNH endonuclease signature motif containing protein
thioredoxin-like domain-containing protein
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: similar to AA sequence:RefSeq:WP_008702026.1
COORDINATES: protein motif:HMM:NF025086.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102177.1
COORDINATES: similar to AA sequence:RefSeq:WP_008666592.1
COORDINATES: similar to AA sequence:RefSeq:WP_008654978.1
COORDINATES: protein motif:HMM:TIGR02226.1
COORDINATES: similar to AA sequence:RefSeq:WP_008693505.1
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910334.1
COORDINATES: protein motif:HMM:NF014927.2
COORDINATES: similar to AA sequence:RefSeq:WP_008667578.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119896.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008703778.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703776.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703774.1
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002650138.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002650140.1
COORDINATES: protein motif:HMM:NF019238.2
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011122820.1
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650078.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_076611725.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099281.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651696.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698741.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913385.1
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: protein motif:HMM:NF013916.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:TIGR00330.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009098495.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651645.1
COORDINATES: similar to AA sequence:RefSeq:WP_008667207.1
COORDINATES: protein motif:HMM:NF011100.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008676359.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_009094781.1
COORDINATES: protein motif:HMM:NF021645.2
PhoPQ-activated protein PqaA family protein
COORDINATES: protein motif:HMM:NF033578.1
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008703062.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654082.1
COORDINATES: similar to AA sequence:RefSeq:WP_005920153.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009098896.1
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650672.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:TIGR02823.1
COORDINATES: protein motif:HMM:NF024257.2
COORDINATES: protein motif:HMM:NF021158.2
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: similar to AA sequence:RefSeq:WP_008667459.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007324301.1
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008662570.1
succinate dehydrogenase cytochrome b558 subunit
COORDINATES: protein motif:HMM:NF004677.0
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012909446.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_007331895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329534.1
LssY C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011119604.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF023170.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF018590.2
COORDINATES: protein motif:HMM:TIGR02246.1
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: similar to AA sequence:RefSeq:WP_008703924.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913488.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911673.1
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650240.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012913486.1
COORDINATES: protein motif:HMM:NF017771.2
COORDINATES: similar to AA sequence:RefSeq:WP_008698049.1
COORDINATES: protein motif:HMM:NF019247.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651353.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF020376.2
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_002655445.1
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: similar to AA sequence:RefSeq:WP_007328333.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:NF021049.2
YiiD C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_008684023.1
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: similar to AA sequence:RefSeq:WP_008684856.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:NF016883.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF020996.2
GO:0008168 - methyltransferase activity [Evidence IEA]
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012910513.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002650081.1
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF024971.2
COORDINATES: similar to AA sequence:RefSeq:WP_008691485.1
COORDINATES: protein motif:HMM:NF038122.1
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912793.1
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF019095.2
COORDINATES: protein motif:HMM:NF025839.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909655.1
COORDINATES: similar to AA sequence:RefSeq:WP_007331568.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095385.1
COORDINATES: similar to AA sequence:RefSeq:WP_008663377.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910558.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651054.1
COORDINATES: similar to AA sequence:RefSeq:WP_000462687.1
aspartate/tyrosine/aromatic aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002651576.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00209.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002651579.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF025180.2
COORDINATES: similar to AA sequence:RefSeq:WP_008658137.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002650372.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101518.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650490.1
COORDINATES: similar to AA sequence:RefSeq:WP_008688089.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008653827.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654988.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655378.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909794.1
COORDINATES: protein motif:HMM:TIGR00393.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF024189.2
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF014059.2
COORDINATES: similar to AA sequence:RefSeq:WP_008656855.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF024353.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020317.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649945.1
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654762.1
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911062.1
COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910507.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008702920.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008708949.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012911104.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007332204.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
glutamine synthetase beta-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010880012.1
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014171.2
TrkA C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655790.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: protein motif:HMM:NF019259.2
COORDINATES: protein motif:HMM:NF019222.2
COORDINATES: protein motif:HMM:NF012946.2
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024890.2
COORDINATES: protein motif:HMM:NF024430.2
COORDINATES: similar to AA sequence:RefSeq:WP_007339234.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF039181.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011123829.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911556.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: protein motif:HMM:NF003717.0
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004074888.1
COORDINATES: similar to AA sequence:RefSeq:WP_011123828.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: protein motif:HMM:TIGR00500.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001381.0
COORDINATES: similar to AA sequence:RefSeq:WP_002655454.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655455.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911549.1
COORDINATES: similar to AA sequence:RefSeq:WP_008666786.1
COORDINATES: similar to AA sequence:RefSeq:WP_020062304.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911545.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911543.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655463.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911540.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674331.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674332.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326802.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655469.1
COORDINATES: similar to AA sequence:RefSeq:WP_008699432.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326799.1
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_009104935.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655474.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911530.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF019508.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911478.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676203.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655479.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655480.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_012911482.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007332532.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697963.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655484.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324993.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095109.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_008653250.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426562.1
COORDINATES: protein motif:HMM:NF020683.2
galactose oxidase early set domain-containing protein
COORDINATES: protein motif:HMM:NF015083.2
COORDINATES: similar to AA sequence:RefSeq:WP_012948683.1
COORDINATES: protein motif:HMM:NF025034.2
COORDINATES: protein motif:HMM:NF022077.2
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF021254.2
exosortase/archaeosortase family protein
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
calcium-binding EGF-like domain-containing protein
COORDINATES: protein motif:HMM:NF023410.2
exosortase-associated EpsI family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012909711.1
COORDINATES: protein motif:HMM:NF013631.2
COORDINATES: protein motif:HMM:NF024627.2
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910533.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008695537.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099221.1
dihydroorotate dehydrogenase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_009099223.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007325263.1
COORDINATES: similar to AA sequence:RefSeq:WP_008702050.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097426.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF016187.2
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_008674374.1
COORDINATES: protein motif:HMM:NF019494.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009095807.1
COORDINATES: protein motif:HMM:NF006367.0
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF003253.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008683112.1
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097271.1
COORDINATES: similar to AA sequence:RefSeq:WP_000449965.1
GO:0008775 - acetate CoA-transferase activity [Evidence IEA]
GO:0006084 - acetyl-CoA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097272.1
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF018549.2
COORDINATES: similar to AA sequence:RefSeq:WP_002442508.1
COORDINATES: protein motif:HMM:NF006552.0
acetyl-CoA C-acyltransferase family protein
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912436.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_012912435.1
cbb3-type cytochrome c oxidase subunit II
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF024778.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009101389.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104157.1
COORDINATES: similar to AA sequence:RefSeq:WP_008670962.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104159.1
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF009668.0
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_007330298.1
COORDINATES: similar to AA sequence:RefSeq:WP_008694305.1
COORDINATES: similar to AA sequence:RefSeq:WP_008656233.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004514804.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002654830.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II secretion system GspH family protein
COORDINATES: protein motif:HMM:TIGR04294.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909428.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF023164.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655566.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007326715.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008660575.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655569.1
COORDINATES: similar to AA sequence:RefSeq:WP_008687885.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910436.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010080949.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654686.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654682.1
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655032.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008701007.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655034.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911326.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911325.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015764.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655907.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011120499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008663627.1
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: similar to AA sequence:RefSeq:WP_008672323.1
GO:0008832 - dGTPase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008662135.1
COORDINATES: protein motif:HMM:NF013400.2
COORDINATES: similar to AA sequence:RefSeq:WP_008663304.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910017.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009094732.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909666.1
formylmethanofuran--tetrahydromethanopterin N-formyltransferase
COORDINATES: protein motif:HMM:NF012784.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019239.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF015390.2
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF013923.2
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: protein motif:HMM:NF012377.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909521.1
COORDINATES: similar to AA sequence:RefSeq:WP_008686224.1
COORDINATES: similar to AA sequence:RefSeq:WP_008684144.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008684142.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017495.2
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: similar to AA sequence:RefSeq:WP_008682168.1
COORDINATES: protein motif:HMM:NF028222.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909359.1
COORDINATES: protein motif:HMM:NF024841.2
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008706129.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF024600.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_009099635.1
COORDINATES: protein motif:HMM:NF019229.2
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011107586.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655764.1
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654624.1
COORDINATES: similar to AA sequence:RefSeq:WP_008660408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324270.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324269.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681698.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911671.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652598.1
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007325196.1
GO:0019213 - deacetylase activity [Evidence IEA]
bacillithiol biosynthesis deacetylase BshB1
COORDINATES: similar to AA sequence:RefSeq:WP_002650339.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655791.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: similar to AA sequence:RefSeq:WP_008703184.1
COORDINATES: protein motif:HMM:NF024376.2
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:NF011202.0
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008662583.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910973.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910782.1
COORDINATES: similar to AA sequence:RefSeq:WP_007328610.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910815.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_002654997.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_012911031.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678886.1
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_008679211.1
COORDINATES: protein motif:HMM:NF015821.2
COORDINATES: similar to AA sequence:RefSeq:WP_008656216.1
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011122091.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008698948.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698946.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654460.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF011678.0
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF012389.2
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021387.2
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910519.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655109.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF019269.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652888.1
COORDINATES: similar to AA sequence:RefSeq:WP_008675869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910792.1
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF008425.0
GO:0050131 - N-methyl-L-amino-acid oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01800.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
bifunctional 2-methylcitrate synthase/citrate synthase
COORDINATES: protein motif:HMM:TIGR02317.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653286.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911369.1
COORDINATES: similar to AA sequence:RefSeq:WP_007330098.1
COORDINATES: protein motif:HMM:NF021391.2
COORDINATES: similar to AA sequence:RefSeq:WP_007324235.1
COORDINATES: protein motif:HMM:NF016027.2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_007329973.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_008701083.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_002653036.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_007325546.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: protein motif:HMM:TIGR03546.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_008708122.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007332434.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909665.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654882.1
COORDINATES: protein motif:HMM:NF021493.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:NF013706.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911424.1
COORDINATES: protein motif:HMM:NF013508.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002655821.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655820.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008678631.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009099508.1
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: similar to AA sequence:RefSeq:WP_008706671.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655294.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011119385.1
D-ribose ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF021565.2
COORDINATES: similar to AA sequence:RefSeq:WP_008660841.1
COORDINATES: similar to AA sequence:RefSeq:WP_007328276.1
functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008668078.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119396.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119389.1
COORDINATES: similar to AA sequence:RefSeq:WP_008669257.1
COORDINATES: similar to AA sequence:RefSeq:WP_007327318.1
COORDINATES: protein motif:HMM:NF014604.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009098066.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911303.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911302.1
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:NF014206.2
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_007329888.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:TIGR00801.1
nucleobase:cation symporter-2 family protein
COORDINATES: protein motif:HMM:NF039830.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655391.1
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: similar to AA sequence:RefSeq:WP_008690369.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326614.1
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: protein motif:HMM:NF016253.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF019575.2
PP2C family serine/threonine-protein phosphatase
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF003657.0
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:NF024806.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909806.1
COORDINATES: similar to AA sequence:RefSeq:WP_008702191.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911735.1
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654863.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654862.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655202.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655197.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: similar to AA sequence:RefSeq:WP_008662798.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910939.1
COORDINATES: similar to AA sequence:RefSeq:WP_008666690.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910937.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF012622.2
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
dockerin type I domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007324978.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329925.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: protein motif:HMM:NF018439.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002654910.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:TIGR01966.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911610.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002650282.1
COORDINATES: similar to AA sequence:RefSeq:WP_008687020.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008688521.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002655547.1
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007339884.1
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009095466.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674985.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013283.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008703008.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912691.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007339041.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009094853.1
COORDINATES: similar to AA sequence:RefSeq:WP_009094844.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674356.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF024915.2
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_009099087.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655142.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007333174.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909651.1
COORDINATES: similar to AA sequence:RefSeq:WP_008705828.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007334279.1
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019284.2
toxin-antitoxin system YwqK family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002654791.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007329986.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008690375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913211.1
cofactor-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_008684533.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690868.1
COORDINATES: protein motif:HMM:TIGR03019.1
FemAB family PEP-CTERM system-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012910289.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012910968.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655002.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007340654.1
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF006187.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654640.1
COORDINATES: protein motif:HMM:NF040165.1
COORDINATES: similar to AA sequence:RefSeq:WP_009098231.1
COORDINATES: protein motif:HMM:NF024545.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655113.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008690219.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008690218.1
COORDINATES: similar to AA sequence:RefSeq:WP_011122857.1
COORDINATES: protein motif:HMM:TIGR01330.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910903.1
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_012910901.1
COORDINATES: protein motif:HMM:NF025160.2
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008681289.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00614.1
COORDINATES: similar to AA sequence:RefSeq:WP_008705676.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911939.1
COORDINATES: similar to AA sequence:RefSeq:WP_008707843.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_002654445.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_002654446.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654447.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015916.2
GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IEA]; GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043130 - ubiquitin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910287.1
COORDINATES: protein motif:HMM:NF025585.2
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: protein motif:HMM:NF017853.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912112.1
GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913182.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291490.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913177.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653631.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913173.1
6-pyruvoyl tetrahydropterin synthase family protein
COORDINATES: protein motif:HMM:NF013991.2
triphosphoribosyl-dephospho-CoA synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012913171.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653623.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_002653621.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911452.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651861.1
COORDINATES: similar to AA sequence:RefSeq:WP_007330418.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011121986.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_008707458.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011120779.1
COORDINATES: protein motif:HMM:NF014626.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF014336.2
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649910.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910909.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911504.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909000.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF025181.2
COORDINATES: protein motif:HMM:NF013180.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002652497.1
COORDINATES: protein motif:HMM:NF027442.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653256.1
COORDINATES: protein motif:HMM:NF024736.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008654618.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911341.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_007329331.1
COORDINATES: protein motif:HMM:NF006579.0
COORDINATES: similar to AA sequence:RefSeq:WP_008706115.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00705.1
GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911016.1
non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_008697576.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654956.1
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002654951.1
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002654726.1
COORDINATES: similar to AA sequence:RefSeq:WP_008656672.1
COORDINATES: similar to AA sequence:RefSeq:WP_007332509.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909485.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_009101128.1
COORDINATES: protein motif:HMM:NF022172.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909122.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020473.2
COORDINATES: protein motif:HMM:NF014439.2
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_011121201.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909515.1
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: protein motif:HMM:TIGR01175.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF037832.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655357.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911344.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911345.1
COORDINATES: protein motif:HMM:NF017415.2
COORDINATES: similar to AA sequence:RefSeq:WP_009094845.1
COORDINATES: protein motif:HMM:NF018452.2
COORDINATES: similar to AA sequence:RefSeq:WP_009094847.1
COORDINATES: similar to AA sequence:RefSeq:WP_009094850.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655108.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912079.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101178.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654788.1
COORDINATES: similar to AA sequence:RefSeq:WP_011123860.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007328387.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_009093995.1
COORDINATES: protein motif:HMM:NF037031.2
COORDINATES: protein motif:HMM:NF013206.2
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008693430.1
COORDINATES: protein motif:HMM:NF013109.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654014.1
COORDINATES: similar to AA sequence:RefSeq:WP_008683570.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653337.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653335.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007334092.1
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653307.1
PLP-dependent aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008695126.1
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_002653065.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652421.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012387.2
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910963.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653961.1
COORDINATES: protein motif:HMM:NF013246.2
COORDINATES: similar to AA sequence:RefSeq:WP_007326741.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909710.1
COORDINATES: protein motif:HMM:NF016840.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912449.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326964.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_012911008.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911887.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:TIGR02037.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012911885.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012910370.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654877.1
COORDINATES: similar to AA sequence:RefSeq:WP_007341002.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654879.1
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_009100162.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654885.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008692360.1
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:TIGR02033.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006183.0
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_002654708.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099948.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: protein motif:HMM:NF019298.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002653960.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653959.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912609.1
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008675275.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911273.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911274.1
anaerobic glycerol-3-phosphate dehydrogenase subunit C
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911276.1
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_012911277.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911279.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002653944.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653943.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653942.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912042.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011120916.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653939.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: protein motif:HMM:NF005500.0
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651042.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652726.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324505.1
COORDINATES: similar to AA sequence:RefSeq:WP_008692695.1
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654542.1
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913226.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649958.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649956.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF007797.0
WcaF family extracellular polysaccharide biosynthesis acetyltransferase
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF021850.2
COORDINATES: protein motif:HMM:NF012449.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021665.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:NF019912.2
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: protein motif:HMM:NF013048.2
GO:0008417 - fucosyltransferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF013882.2
COORDINATES: protein motif:HMM:NF018017.2
mitochondrial fission ELM1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009098675.1
COORDINATES: protein motif:HMM:TIGR02989.1
COORDINATES: protein motif:HMM:NF012888.2
sulfotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009095236.1
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650860.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002650862.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008677498.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677500.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: protein motif:HMM:NF012289.2
COORDINATES: protein motif:HMM:NF012366.2
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653244.1
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_016448881.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655326.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_008703293.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655321.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911512.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011122161.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654517.1
phosphopantothenoylcysteine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_008697937.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697938.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_008697939.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654513.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101321.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912054.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909791.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007326035.1
COORDINATES: similar to AA sequence:RefSeq:WP_008687814.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006045.0
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: protein motif:HMM:TIGR00696.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF013652.2
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: similar to AA sequence:RefSeq:WP_008694417.1
COORDINATES: protein motif:HMM:NF020073.2
COORDINATES: protein motif:HMM:NF013227.2
COORDINATES: protein motif:HMM:NF016850.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021996.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913380.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329829.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910986.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097547.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR03032.1
COORDINATES: protein motif:HMM:TIGR01376.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650181.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008707430.1
LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-2,3-diacylglucosamine diphosphatase LpxI
COORDINATES: similar to AA sequence:RefSeq:WP_009095814.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007324174.1
COORDINATES: similar to AA sequence:RefSeq:WP_008693760.1
GO:0009678 - pyrophosphate hydrolysis-driven proton transmembrane transporter activity [Evidence IEA]
V-type H(+)-translocating pyrophosphatase
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:NF016924.2
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF015365.2
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: similar to AA sequence:RefSeq:WP_008701626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008661600.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase I
COORDINATES: similar to AA sequence:RefSeq:WP_008673400.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF019242.2
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008702941.1
COORDINATES: similar to AA sequence:RefSeq:WP_009094299.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651289.1
COORDINATES: protein motif:HMM:NF018449.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912071.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655303.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_012912074.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912075.1
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911065.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911064.1
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911515.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910798.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008687896.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007325744.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650164.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909594.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002651668.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_002651666.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655218.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650657.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650656.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008704475.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651292.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF012304.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911760.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912458.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007327156.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007327157.1
COORDINATES: similar to AA sequence:RefSeq:WP_007339419.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00768.1
COORDINATES: protein motif:HMM:TIGR03120.1
GO:0018759 - methenyltetrahydromethanopterin cyclohydrolase activity [Evidence IEA]
methenyltetrahydromethanopterin cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007332527.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011123923.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_008674827.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654936.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679468.1
dual specificity protein phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008691665.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654886.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676796.1
COORDINATES: protein motif:HMM:NF016244.2
COORDINATES: similar to AA sequence:RefSeq:WP_008704514.1
COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1
COORDINATES: similar to AA sequence:RefSeq:WP_003729641.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655014.1
COORDINATES: similar to AA sequence:RefSeq:WP_012908967.1
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008663340.1
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911371.1
Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002655307.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911373.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911614.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912088.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012912089.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911900.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_008668667.1
COORDINATES: protein motif:HMM:NF018530.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911115.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654535.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654530.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654520.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911734.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697958.1
COORDINATES: similar to AA sequence:RefSeq:WP_009094570.1
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008663721.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011121724.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913154.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095384.1
COORDINATES: similar to AA sequence:RefSeq:WP_007325819.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007332343.1
COORDINATES: similar to AA sequence:RefSeq:WP_011123533.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019240.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912101.1
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912116.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_012912115.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652481.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652477.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912884.1
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912886.1
COORDINATES: protein motif:HMM:NF024893.2
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652450.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652449.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF014725.2
COORDINATES: similar to AA sequence:RefSeq:WP_007328258.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008679357.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008705314.1
COORDINATES: similar to AA sequence:RefSeq:WP_008691361.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651632.1
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024640.2
COORDINATES: similar to AA sequence:RefSeq:WP_008663642.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF039746.1
COORDINATES: similar to AA sequence:RefSeq:WP_007336899.1
COORDINATES: similar to AA sequence:RefSeq:WP_009094708.1
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: protein motif:HMM:NF014218.2
NCS1 family nucleobase:cation symporter-1
COORDINATES: protein motif:HMM:TIGR01722.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653096.1
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase family protein
COORDINATES: protein motif:HMM:NF019605.2
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF012517.2
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF024872.2
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910066.1
COORDINATES: protein motif:HMM:NF024760.2
COORDINATES: protein motif:HMM:NF040416.1
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: protein motif:HMM:NF025063.2
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF027230.2
COORDINATES: protein motif:HMM:NF025841.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF024307.2
COORDINATES: protein motif:HMM:NF018123.2
COORDINATES: protein motif:HMM:NF019248.2
COORDINATES: protein motif:HMM:NF005425.0
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009101600.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF012684.2
peptide chain release factor-like protein
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_008660676.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:TIGR01212.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012912564.1
COORDINATES: similar to AA sequence:RefSeq:WP_008699120.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_009099631.1
GO:0005506 - iron ion binding [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
iron-sulfur cluster repair di-iron protein
COORDINATES: similar to AA sequence:RefSeq:WP_008658338.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697593.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654856.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912078.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909973.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911378.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911380.1
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911155.1
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF014705.2
COORDINATES: similar to AA sequence:RefSeq:WP_011119341.1
COORDINATES: protein motif:HMM:NF040463.1
all3515 family Zur-repressed PEP-CTERM protein
COORDINATES: similar to AA sequence:RefSeq:WP_002651032.1
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_007335144.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095745.1
COORDINATES: similar to AA sequence:RefSeq:WP_007340901.1
COORDINATES: protein motif:HMM:NF025674.2
COORDINATES: similar to AA sequence:RefSeq:WP_007340903.1
COORDINATES: similar to AA sequence:RefSeq:WP_008663679.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912264.1
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:NF012593.2
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_008707328.1
COORDINATES: similar to AA sequence:RefSeq:WP_007337512.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659053.1
COORDINATES: protein motif:HMM:NF019146.2
COORDINATES: similar to AA sequence:RefSeq:WP_008683826.1
COORDINATES: protein motif:HMM:TIGR02982.1
COORDINATES: protein motif:HMM:TIGR01185.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909016.1
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02570.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-U CRISPR-associated RAMP protein Csb1/Cas7u
COORDINATES: protein motif:HMM:TIGR02621.1
GO:0004386 - helicase activity [Evidence IEA]
type I-U CRISPR-associated helicase/endonuclease Cas3
COORDINATES: similar to AA sequence:RefSeq:WP_008663418.1
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_007338224.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024904.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912201.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912202.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012911772.1
COORDINATES: similar to AA sequence:RefSeq:WP_000022439.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_008663759.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913456.1
COORDINATES: similar to AA sequence:RefSeq:WP_008705289.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911928.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680232.1
COORDINATES: similar to AA sequence:RefSeq:WP_008701607.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_002649924.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649926.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911931.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911932.1
COORDINATES: similar to AA sequence:RefSeq:WP_008672426.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: similar to AA sequence:RefSeq:WP_000262172.1
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913618.1
COORDINATES: protein motif:HMM:NF016854.2
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: protein motif:HMM:NF024045.2
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family insertase periplasmic-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002654822.1
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_012911740.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_012910336.1
acyl-[ACP]--phospholipid O-acyltransferase
COORDINATES: protein motif:HMM:NF018460.2
COORDINATES: similar to AA sequence:RefSeq:WP_008683477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911266.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008670293.1
COORDINATES: similar to AA sequence:RefSeq:WP_008665828.1
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009103660.1
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912663.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912664.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912685.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653086.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016448039.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_007331246.1
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654995.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653328.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: similar to AA sequence:RefSeq:WP_007335055.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002653023.1
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911330.1
COORDINATES: protein motif:HMM:NF021253.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912829.1
COORDINATES: protein motif:HMM:NF012803.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911162.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911163.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653348.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653346.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011122661.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008677028.1
GO:0005337 - nucleoside transmembrane transporter activity [Evidence IEA]
GO:0015858 - nucleoside transport [Evidence IEA]
NupC/NupG family nucleoside CNT transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007327769.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: protein motif:HMM:NF039394.1
DUF6268 family outer membrane beta-barrel protein
COORDINATES: similar to AA sequence:RefSeq:WP_002651199.1
COORDINATES: protein motif:HMM:NF027249.2
COORDINATES: protein motif:HMM:NF019540.2
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: protein motif:HMM:NF012885.2
aldolase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF021041.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF037334.2
COORDINATES: protein motif:HMM:NF012516.2
GO:0004650 - polygalacturonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008659147.1
COORDINATES: protein motif:HMM:NF028442.2
COORDINATES: protein motif:HMM:NF033541.0
COORDINATES: similar to AA sequence:RefSeq:WP_009102391.1
COORDINATES: protein motif:HMM:NF015746.2
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF009020.0
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF039990.1
DcaP family trimeric outer membrane transporter
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF011765.0
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023684.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF028476.2
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: similar to AA sequence:RefSeq:WP_010980743.1
COORDINATES: protein motif:HMM:NF012457.2
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913110.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653516.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674526.1
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017591.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655193.1
COORDINATES: protein motif:HMM:NF016299.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651654.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690891.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_002651656.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_002651657.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_008652921.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
Na(+)-translocating NADH-quinone reductase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_002651659.1
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_008690896.1
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: protein motif:HMM:TIGR00157.1
COORDINATES: similar to AA sequence:RefSeq:WP_001020786.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008662520.1
COORDINATES: similar to AA sequence:RefSeq:WP_008704050.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008697802.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF040466.1
COORDINATES: protein motif:HMM:NF017505.2
COORDINATES: protein motif:HMM:NF015909.2
COORDINATES: protein motif:HMM:NF033563.0
COORDINATES: protein motif:HMM:TIGR00016.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013665.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653984.1
COORDINATES: similar to AA sequence:RefSeq:WP_008699069.1
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912580.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653290.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653291.1
COORDINATES: similar to AA sequence:RefSeq:WP_008701890.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911966.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:NF016199.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911563.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_002653298.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO:0008153 - para-aminobenzoic acid biosynthetic process [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: similar to AA sequence:RefSeq:WP_002653299.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911566.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653070.1
COORDINATES: protein motif:HMM:NF015690.2
COORDINATES: protein motif:HMM:NF009544.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655592.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002653453.1
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF025088.2
COORDINATES: protein motif:HMM:NF014016.2
COORDINATES: protein motif:HMM:NF040120.1
COORDINATES: similar to AA sequence:RefSeq:WP_011121727.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:NF003585.0
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909308.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653889.1
COORDINATES: protein motif:HMM:NF008273.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
manganese-binding transcriptional regulator MntR
COORDINATES: similar to AA sequence:RefSeq:WP_011123083.1
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007325374.1
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: similar to AA sequence:RefSeq:WP_011123449.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911171.1
COORDINATES: protein motif:HMM:TIGR03123.1
H4MPT-linked C1 transfer pathway protein
COORDINATES: similar to AA sequence:RefSeq:WP_007326213.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652894.1
non-heme iron oxygenase ferredoxin subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012913443.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008654727.1
COORDINATES: similar to AA sequence:RefSeq:WP_008654728.1
COORDINATES: similar to AA sequence:RefSeq:WP_000236330.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF037979.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695099.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011117901.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912581.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911412.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912032.1
COORDINATES: protein motif:HMM:NF019908.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912149.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912148.1
COORDINATES: similar to AA sequence:RefSeq:WP_008705053.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329747.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103851.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681319.1
COORDINATES: similar to AA sequence:RefSeq:WP_008664471.1
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912521.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650421.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014997.2
COORDINATES: similar to AA sequence:RefSeq:WP_007325646.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654489.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681694.1
COORDINATES: similar to AA sequence:RefSeq:WP_008700757.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654549.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008661606.1
COORDINATES: protein motif:HMM:NF013591.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008241 - peptidyl-dipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008656619.1
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652827.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912291.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651758.1
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911349.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910718.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008693501.1
COORDINATES: similar to AA sequence:RefSeq:WP_008701622.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674506.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF037043.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651988.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912789.1
COORDINATES: similar to AA sequence:RefSeq:WP_009093557.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326598.1
COORDINATES: similar to AA sequence:RefSeq:WP_008693044.1
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008706401.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652394.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652395.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_008675374.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_008674167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008682849.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912946.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_012912699.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007327268.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651999.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652000.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_002652001.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_007327265.1
COORDINATES: similar to AA sequence:RefSeq:WP_008664710.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101176.1
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002651919.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913312.1
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:NF012439.2
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011122671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011122672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913319.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913305.1
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: protein motif:HMM:TIGR02352.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: protein motif:HMM:NF033657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007334376.1
COORDINATES: protein motif:HMM:NF025851.2
COORDINATES: protein motif:HMM:NF040048.1
COORDINATES: protein motif:HMM:NF013885.2
COORDINATES: protein motif:HMM:NF013353.2
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: protein motif:HMM:NF012246.2
ribulose-bisphosphate carboxylase large subunit family protein
COORDINATES: protein motif:HMM:NF024281.2
COORDINATES: similar to AA sequence:RefSeq:WP_008690146.1
COORDINATES: similar to AA sequence:RefSeq:WP_011121884.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652729.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653449.1
COORDINATES: similar to AA sequence:RefSeq:WP_007328050.1
COORDINATES: protein motif:HMM:NF036578.2
COORDINATES: protein motif:HMM:NF027900.2
COORDINATES: protein motif:HMM:NF000756.0
COORDINATES: protein motif:HMM:NF014798.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292974.1
COORDINATES: protein motif:HMM:NF014948.2
L-fucose/L-arabinose isomerase family protein
COORDINATES: protein motif:HMM:NF013300.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
T9SS C-terminal target domain-containing protein
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: similar to AA sequence:RefSeq:WP_008691752.1
COORDINATES: similar to AA sequence:RefSeq:WP_007332851.1
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655071.1
COORDINATES: similar to AA sequence:RefSeq:WP_008672931.1
glycogen-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_008657144.1
COORDINATES: protein motif:HMM:NF039498.1
COORDINATES: similar to AA sequence:RefSeq:WP_008657148.1
COORDINATES: similar to AA sequence:RefSeq:WP_008665484.1
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_007332840.1
COORDINATES: similar to AA sequence:RefSeq:WP_008704304.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008704308.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326685.1
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007334769.1
COORDINATES: protein motif:HMM:NF037203.2
COORDINATES: protein motif:HMM:NF041116.1
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: protein motif:HMM:NF024108.2
TraM recognition domain-containing protein
COORDINATES: protein motif:HMM:NF012651.2
GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009240709.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097021.1
COORDINATES: similar to AA sequence:RefSeq:WP_007325996.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681331.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654034.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654035.1
COORDINATES: similar to AA sequence:RefSeq:WP_008685543.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910171.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007340599.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008672903.1
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: similar to AA sequence:RefSeq:WP_007332056.1
COORDINATES: similar to AA sequence:RefSeq:WP_008672921.1
COORDINATES: similar to AA sequence:RefSeq:WP_008657269.1
COORDINATES: similar to AA sequence:RefSeq:WP_009096953.1
COORDINATES: similar to AA sequence:RefSeq:WP_008657180.1
COORDINATES: protein motif:HMM:NF013695.2
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: protein motif:HMM:NF013930.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011123898.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02686.1
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007339883.1
COORDINATES: protein motif:HMM:NF024298.2
COORDINATES: similar to AA sequence:RefSeq:WP_011123671.1
COORDINATES: protein motif:HMM:TIGR01420.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_009100124.1
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_086557984.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004198495.1
COORDINATES: protein motif:HMM:NF033590.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF019997.2
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: protein motif:HMM:NF015630.2
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_011124106.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103440.1
COORDINATES: protein motif:HMM:NF025080.2
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: protein motif:HMM:NF013984.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: protein motif:HMM:TIGR04162.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
exosortase E/protease, VPEID-CTERM system
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:TIGR04534.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910951.1
COORDINATES: similar to AA sequence:RefSeq:WP_008707594.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_076611217.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03108.1
amidotransferase 1, exosortase A system-associated
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014417.2
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: protein motif:HMM:NF020811.2
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: protein motif:HMM:NF013077.2
phosphoribosylaminoimidazole carboxylase
COORDINATES: protein motif:HMM:NF040443.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: similar to AA sequence:RefSeq:WP_008667786.1
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF021578.2
COORDINATES: protein motif:HMM:NF009214.0
COORDINATES: protein motif:HMM:NF004035.0
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: protein motif:HMM:NF013722.2
COORDINATES: protein motif:HMM:NF006560.0
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002653857.1
COORDINATES: protein motif:HMM:NF016921.2
COORDINATES: similar to AA sequence:RefSeq:WP_008671322.1
COORDINATES: protein motif:HMM:NF020332.2
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: protein motif:HMM:NF033546.1
replication initiation factor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009094703.1
COORDINATES: protein motif:HMM:NF013760.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652963.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103014.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF014470.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF019886.2
COORDINATES: protein motif:HMM:NF025596.2
COORDINATES: protein motif:HMM:NF012493.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037206.2
S-4TM family putative pore-forming effector
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_007340170.1
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: protein motif:HMM:TIGR00835.1
alanine/glycine:cation symporter family protein
COORDINATES: protein motif:HMM:NF027656.2
COORDINATES: similar to AA sequence:RefSeq:WP_009095564.1
COORDINATES: similar to AA sequence:RefSeq:WP_008701429.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909804.1
COORDINATES: similar to AA sequence:RefSeq:WP_009098992.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911796.1
COORDINATES: similar to AA sequence:RefSeq:WP_008688334.1
COORDINATES: similar to AA sequence:RefSeq:WP_014097094.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012910863.1
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: similar to AA sequence:RefSeq:WP_008671171.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703873.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017834.2
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: protein motif:HMM:NF012893.2
COORDINATES: protein motif:HMM:NF002469.0
COORDINATES: protein motif:HMM:NF014534.2
GO:0044238 - primary metabolic process [Evidence IEA]
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012910053.1
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680988.1
COORDINATES: similar to AA sequence:RefSeq:WP_011122039.1
COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1
COORDINATES: protein motif:HMM:NF014228.2
Sir2 family NAD-dependent protein deacetylase
COORDINATES: protein motif:HMM:NF012258.2
GO:0005509 - calcium ion binding [Evidence IEA]
GO:0007156 - homophilic cell adhesion via plasma membrane adhesion molecules [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011123343.1
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: similar to AA sequence:RefSeq:WP_007327212.1
COORDINATES: protein motif:HMM:NF027641.2
COORDINATES: protein motif:HMM:NF025182.2
COORDINATES: protein motif:HMM:NF013986.2
COORDINATES: protein motif:HMM:NF015727.2
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020039.2
COORDINATES: protein motif:HMM:NF012925.2
coagulation factor 5/8 type domain-containing protein
COORDINATES: protein motif:HMM:NF014147.2
COORDINATES: protein motif:HMM:TIGR00792.1
COORDINATES: protein motif:HMM:NF012863.2
GO:0030599 - pectinesterase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009103641.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_008673150.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_009100429.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909312.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099118.1
COORDINATES: protein motif:HMM:NF017263.2
COORDINATES: protein motif:HMM:NF025943.2
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF039533.1
COORDINATES: protein motif:HMM:TIGR01389.1
COORDINATES: protein motif:HMM:TIGR00066.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008695194.1
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00197.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913184.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009101005.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101003.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101001.1
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655798.1
COORDINATES: similar to AA sequence:RefSeq:WP_008661299.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_008675669.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679369.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099110.1
COORDINATES: similar to AA sequence:RefSeq:WP_008664414.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659336.1
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: protein motif:HMM:NF017935.2
COORDINATES: protein motif:HMM:NF024878.2
COORDINATES: protein motif:HMM:NF019156.2
COORDINATES: similar to AA sequence:RefSeq:WP_004082002.1
COORDINATES: protein motif:HMM:NF019155.2
COORDINATES: similar to AA sequence:RefSeq:WP_000847902.1
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: similar to AA sequence:RefSeq:WP_008706098.1
COORDINATES: protein motif:HMM:NF025761.2
circularly permuted type 2 ATP-grasp protein
COORDINATES: similar to AA sequence:RefSeq:WP_002652137.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911778.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652135.1
COORDINATES: protein motif:HMM:NF027219.2
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913455.1
COORDINATES: protein motif:HMM:NF039343.1
COORDINATES: protein motif:HMM:NF025510.2
COORDINATES: similar to AA sequence:RefSeq:WP_008682500.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650392.1
COORDINATES: protein motif:HMM:NF028004.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653916.1
GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912220.1
COORDINATES: protein motif:HMM:NF015995.2
COORDINATES: similar to AA sequence:RefSeq:WP_009096363.1
COORDINATES: protein motif:HMM:NF016704.2
COORDINATES: similar to AA sequence:RefSeq:WP_009097999.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910785.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912736.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912172.1
COORDINATES: protein motif:HMM:NF025715.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911834.1
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_008705069.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911830.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681581.1
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651413.1
COORDINATES: protein motif:HMM:NF024762.2
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652776.1
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012911416.1
COORDINATES: similar to AA sequence:RefSeq:WP_007339488.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002652773.1
COORDINATES: similar to AA sequence:RefSeq:WP_007335201.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009093949.1
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002652572.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695486.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_008707833.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: similar to AA sequence:RefSeq:WP_002652425.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652426.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695239.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_012913382.1
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911399.1
COORDINATES: similar to AA sequence:RefSeq:WP_008696317.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651650.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652107.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911099.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012913221.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652032.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651249.1
COORDINATES: protein motif:HMM:NF015780.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909550.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF014896.2
COORDINATES: protein motif:HMM:NF012299.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651547.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912799.1
COORDINATES: similar to AA sequence:RefSeq:WP_008694836.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_101244925.1
COORDINATES: similar to AA sequence:RefSeq:WP_058893574.1
COORDINATES: protein motif:HMM:NF025654.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652658.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002652657.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012912227.1
COORDINATES: protein motif:HMM:NF016361.2
PSP1 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007326296.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:NF028290.2
COORDINATES: protein motif:HMM:NF016367.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912233.1
COORDINATES: protein motif:HMM:NF021188.2
polyhydroxyalkanoic acid system family protein
COORDINATES: protein motif:HMM:NF012725.2
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008658250.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008675671.1
GO:0008733 - L-arabinose isomerase activity [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008675668.1
COORDINATES: similar to AA sequence:RefSeq:WP_009096056.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: protein motif:HMM:NF012335.2
zinc-binding alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF008761.0
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008656429.1
COORDINATES: similar to AA sequence:RefSeq:WP_008672579.1
GO:0015535 - fucose:proton symporter activity [Evidence IEA]
GO:0015756 - fucose transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF022039.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913138.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706719.1
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_002652149.1
COORDINATES: protein motif:HMM:TIGR03000.1
COORDINATES: protein motif:HMM:TIGR00080.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: similar to AA sequence:RefSeq:WP_009100951.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008662298.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655606.1
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_003242487.1
COORDINATES: similar to AA sequence:RefSeq:WP_008691295.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326920.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324035.1
COORDINATES: similar to AA sequence:RefSeq:WP_008689769.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651902.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651901.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_009103834.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_008655506.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912932.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651892.1
COORDINATES: similar to AA sequence:RefSeq:WP_007338870.1
COORDINATES: similar to AA sequence:RefSeq:WP_008691445.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007329975.1
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:NF015552.2
tellurite resistance/C4-dicarboxylate transporter family protein
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF012602.2
molybdopterin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002651229.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651593.1
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: similar to AA sequence:RefSeq:WP_007330790.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676806.1
COORDINATES: similar to AA sequence:RefSeq:WP_008689255.1
COORDINATES: protein motif:HMM:NF019227.2
polymorphic toxin-type HINT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002655553.1
COORDINATES: protein motif:HMM:NF018826.2
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011119501.1
COORDINATES: protein motif:HMM:NF021193.2
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651168.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698833.1
COORDINATES: protein motif:HMM:TIGR02421.1
flavohemoglobin expression-modulating QEGLA motif protein
COORDINATES: similar to AA sequence:RefSeq:WP_008679421.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651869.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651276.1
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002664853.1
COORDINATES: similar to AA sequence:RefSeq:WP_011121001.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: protein motif:HMM:TIGR02683.1
COORDINATES: protein motif:HMM:TIGR03718.1
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329291.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910604.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909205.1
COORDINATES: protein motif:HMM:TIGR01976.1
COORDINATES: protein motif:HMM:TIGR02913.1
COORDINATES: protein motif:HMM:NF019262.2
COORDINATES: similar to AA sequence:RefSeq:WP_007327014.1
COORDINATES: similar to AA sequence:RefSeq:WP_007333874.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655384.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008685726.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651555.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913157.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011122104.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674387.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097415.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097417.1
COORDINATES: similar to AA sequence:RefSeq:WP_008696109.1
COORDINATES: protein motif:HMM:NF002794.0
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01182.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_007330070.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653438.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913658.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: protein motif:HMM:NF018770.2
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: similar to AA sequence:RefSeq:WP_008691749.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655259.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_009099051.1
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:TIGR02574.1
COORDINATES: protein motif:HMM:TIGR02385.1
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_002655604.1
COORDINATES: similar to AA sequence:RefSeq:WP_008681275.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678639.1
COORDINATES: protein motif:HMM:NF019230.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105304.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652247.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_002653901.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653902.1
COORDINATES: protein motif:HMM:NF015720.2
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: protein motif:HMM:TIGR02284.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095714.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650752.1
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102058.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910632.1
COORDINATES: similar to AA sequence:RefSeq:WP_008653605.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909776.1
COORDINATES: similar to AA sequence:RefSeq:WP_009093831.1
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653017.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706149.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007328993.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119882.1
COORDINATES: protein motif:HMM:NF014022.2
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: protein motif:HMM:NF021524.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: similar to AA sequence:RefSeq:WP_008698823.1
Rho termination factor N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF006967.0
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF028293.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651093.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
formylmethanofuran dehydrogenase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_002651143.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_008663053.1
COORDINATES: similar to AA sequence:RefSeq:WP_007333673.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101565.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012911848.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911850.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911851.1
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: protein motif:HMM:TIGR01473.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014665.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651805.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911857.1
COORDINATES: protein motif:HMM:NF036497.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911862.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651798.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
cytochrome b N-terminal domain-containing protein
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012911865.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008657699.1
COORDINATES: similar to AA sequence:RefSeq:WP_007334775.1
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652312.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698633.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011123511.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012909980.1
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: similar to AA sequence:RefSeq:WP_008698734.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009094494.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008666253.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651678.1
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007331900.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF002727.0
COORDINATES: similar to AA sequence:RefSeq:WP_008691292.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912837.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698139.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698578.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_008693765.1
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008670573.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912512.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008669091.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912510.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_008694830.1
COORDINATES: protein motif:HMM:NF015892.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF000868.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF015807.2
COORDINATES: similar to AA sequence:RefSeq:WP_007331836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011117846.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651223.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013538518.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097998.1
aromatic aminobenezylarsenical efflux permease ArsG family transporter
COORDINATES: protein motif:HMM:NF040494.1
nitrophenyl compound nitroreductase subunit ArsF family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008676448.1
COORDINATES: similar to AA sequence:RefSeq:WP_008676446.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097986.1
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: similar to AA sequence:RefSeq:WP_009093773.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695227.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_002653746.1
COORDINATES: similar to AA sequence:RefSeq:WP_008683709.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008686779.1
COORDINATES: similar to AA sequence:RefSeq:WP_008662958.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652220.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007340094.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF025743.2
COORDINATES: similar to AA sequence:RefSeq:WP_007325782.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651154.1
OB-fold nucleic acid binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002651978.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651325.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_002651324.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651323.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_011121465.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: similar to AA sequence:RefSeq:WP_009103752.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119573.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012909938.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651407.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651408.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651050.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_002652034.1
COORDINATES: similar to AA sequence:RefSeq:WP_011124088.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677717.1
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: protein motif:HMM:NF012427.2
COORDINATES: similar to AA sequence:RefSeq:WP_007329136.1
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104990.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909201.1
COORDINATES: similar to AA sequence:RefSeq:WP_008686837.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104740.1
COORDINATES: similar to AA sequence:RefSeq:WP_007339163.1
COORDINATES: similar to AA sequence:RefSeq:WP_008688393.1
COORDINATES: similar to AA sequence:RefSeq:WP_009098743.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655437.1
COORDINATES: protein motif:HMM:NF013357.2
COORDINATES: protein motif:HMM:NF021431.2
type II toxin-antitoxin system HigB family toxin
COORDINATES: protein motif:HMM:NF015818.2
aminoglycoside phosphotransferase family protein
COORDINATES: protein motif:HMM:NF007141.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009222.0
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_008663917.1
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102296.1
COORDINATES: similar to AA sequence:RefSeq:WP_007340032.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653274.1
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: protein motif:HMM:NF013784.2
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010947366.1
COORDINATES: protein motif:HMM:TIGR02866.1
COORDINATES: protein motif:HMM:TIGR02891.1
COORDINATES: protein motif:HMM:NF021214.2
COORDINATES: protein motif:HMM:NF012263.2
COORDINATES: protein motif:HMM:NF010052.0
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:NF022766.2
COORDINATES: similar to AA sequence:RefSeq:WP_008671142.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703918.1
COORDINATES: similar to AA sequence:RefSeq:WP_008701977.1
COORDINATES: similar to AA sequence:RefSeq:WP_007334762.1
COORDINATES: similar to AA sequence:RefSeq:WP_007326679.1
COORDINATES: protein motif:HMM:NF016838.2
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
dimethyl sulfoxide reductase anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008708023.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651165.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012910394.1
COORDINATES: protein motif:HMM:NF024295.2
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: similar to AA sequence:RefSeq:WP_009095984.1
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF021365.2
COORDINATES: similar to AA sequence:RefSeq:WP_002649984.1
COORDINATES: similar to AA sequence:RefSeq:WP_009096975.1
COORDINATES: protein motif:HMM:NF009555.0
YgeY family selenium metabolism-linked hydrolase
COORDINATES: protein motif:HMM:NF009007.0
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:TIGR00260.1
COORDINATES: protein motif:HMM:TIGR02964.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]; GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase accessory protein XdhC
COORDINATES: protein motif:HMM:TIGR02965.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase molybdopterin binding subunit
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: protein motif:HMM:NF015148.2
COORDINATES: similar to AA sequence:RefSeq:WP_009093787.1
COORDINATES: protein motif:HMM:NF014910.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652278.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655869.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652404.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652409.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002652411.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912677.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002652414.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324683.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651139.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913048.1
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013800177.1
COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1
COORDINATES: similar to AA sequence:RefSeq:WP_008655702.1
COORDINATES: protein motif:HMM:NF019935.2
COORDINATES: protein motif:HMM:NF024783.2
COORDINATES: protein motif:HMM:NF037477.2
contact-dependent growth inhibition system immunity protein
COORDINATES: similar to AA sequence:RefSeq:WP_008697953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011121456.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_007324127.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012912723.1
COORDINATES: similar to AA sequence:RefSeq:WP_012912722.1
COORDINATES: similar to AA sequence:RefSeq:WP_007340984.1
COORDINATES: similar to AA sequence:RefSeq:WP_008657347.1
COORDINATES: protein motif:HMM:NF016269.2
lipid-binding SYLF domain-containing protein
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_009095125.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652504.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652694.1
COORDINATES: similar to AA sequence:RefSeq:WP_008675973.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909533.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002652581.1
COORDINATES: protein motif:HMM:NF018038.2
COORDINATES: similar to AA sequence:RefSeq:WP_009103362.1
COORDINATES: protein motif:HMM:NF012475.2
GH32 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008704767.1
COORDINATES: protein motif:HMM:NF018828.2
COORDINATES: protein motif:HMM:NF008353.0
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0006014 - D-ribose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007330672.1
COORDINATES: protein motif:HMM:TIGR00813.1
COORDINATES: protein motif:HMM:NF027671.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398654.1
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654945.1
COORDINATES: similar to AA sequence:RefSeq:WP_011118036.1
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:TIGR02406.1
GO:0033816 - diaminobutyrate acetyltransferase activity [Evidence IEA]
GO:0019491 - ectoine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008705006.1
GO:0045303 - diaminobutyrate-2-oxoglutarate transaminase activity [Evidence IEA]
diaminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002654072.1
COORDINATES: similar to AA sequence:RefSeq:WP_014643639.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910932.1
COORDINATES: protein motif:HMM:TIGR00765.1
COORDINATES: similar to AA sequence:RefSeq:WP_007333477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910473.1
COORDINATES: protein motif:HMM:NF023331.2
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_007329257.1
COORDINATES: protein motif:HMM:NF016705.2
COORDINATES: protein motif:HMM:NF022517.2
COORDINATES: protein motif:HMM:NF016158.2
COORDINATES: similar to AA sequence:RefSeq:WP_008659611.1
COORDINATES: similar to AA sequence:RefSeq:WP_011123244.1
COORDINATES: protein motif:HMM:NF014646.2
COORDINATES: similar to AA sequence:RefSeq:WP_011120910.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654827.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909191.1
COORDINATES: protein motif:HMM:NF024562.2
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: protein motif:HMM:NF014825.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651572.1
COORDINATES: protein motif:HMM:NF024759.2
COORDINATES: similar to AA sequence:RefSeq:WP_002651519.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651084.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002651090.1
endonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012911391.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909053.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650052.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652674.1
COORDINATES: similar to AA sequence:RefSeq:WP_007328023.1
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650502.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398718.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019835552.1
COORDINATES: protein motif:HMM:NF022215.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909460.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909157.1
COORDINATES: similar to AA sequence:RefSeq:WP_008700687.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101080.1
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_002650712.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008667209.1
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF006828.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001573017.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008689489.1
COORDINATES: protein motif:HMM:NF012339.2
COORDINATES: similar to AA sequence:RefSeq:WP_002650364.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF015655.2
bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002650621.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_012909671.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008684691.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008660860.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649906.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909908.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652981.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF012961.2
COORDINATES: protein motif:HMM:NF033573.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009099229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099228.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651773.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003113510.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012783.2
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_008707114.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00231.1
COORDINATES: protein motif:HMM:TIGR00671.1
COORDINATES: protein motif:HMM:NF008955.0
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007327901.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650729.1
COORDINATES: similar to AA sequence:RefSeq:WP_008654235.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: similar to AA sequence:RefSeq:WP_008681556.1
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:NF020136.2
COORDINATES: similar to AA sequence:RefSeq:WP_009096294.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_002654681.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911025.1
COORDINATES: protein motif:HMM:NF019032.2
COORDINATES: similar to AA sequence:RefSeq:WP_007333587.1
COORDINATES: protein motif:HMM:NF013328.2
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: protein motif:HMM:NF013625.2
peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012911262.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655794.1
COORDINATES: similar to AA sequence:RefSeq:WP_002652836.1
COORDINATES: protein motif:HMM:TIGR02603.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097076.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655237.1
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007336123.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF014090.2
COORDINATES: protein motif:HMM:NF021445.2
COORDINATES: similar to AA sequence:RefSeq:WP_008683592.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021388.2
COORDINATES: similar to AA sequence:RefSeq:WP_012909161.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909160.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03106.1
osmoprotectant NAGGN system M42 family peptidase
COORDINATES: protein motif:HMM:TIGR03103.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03104.1
N-acetylglutaminylglutamine amidotransferase
COORDINATES: protein motif:HMM:NF015056.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007333650.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103341.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651360.1
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: protein motif:HMM:NF013491.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011117853.1
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_011118019.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659365.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006189.0
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: similar to AA sequence:RefSeq:WP_002652556.1
COORDINATES: similar to AA sequence:RefSeq:WP_009099400.1
COORDINATES: protein motif:HMM:NF018717.2
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_011119028.1
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012913351.1
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF024565.2
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_012913348.1
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: similar to AA sequence:RefSeq:WP_011124092.1
COORDINATES: similar to AA sequence:RefSeq:WP_008659859.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF023431.2
COORDINATES: protein motif:HMM:NF021483.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: protein motif:HMM:NF018963.2
COORDINATES: similar to AA sequence:RefSeq:WP_013814780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008707938.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655533.1
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002655532.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909470.1
COORDINATES: protein motif:HMM:NF013827.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_008674361.1
COORDINATES: similar to AA sequence:RefSeq:WP_012908976.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008662151.1
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: protein motif:HMM:NF033668.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677651.1
COORDINATES: similar to AA sequence:RefSeq:WP_002654415.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690512.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690514.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_012909044.1
COORDINATES: protein motif:HMM:NF026220.2
COORDINATES: protein motif:HMM:NF021463.2
COORDINATES: similar to AA sequence:RefSeq:WP_010755939.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655418.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655613.1
COORDINATES: similar to AA sequence:RefSeq:WP_002651046.1
COORDINATES: protein motif:HMM:NF025878.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_002654921.1
COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: similar to AA sequence:RefSeq:WP_008660272.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008666333.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655181.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655261.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101980.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: protein motif:HMM:NF013089.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF018880.2
COORDINATES: protein motif:HMM:NF003742.0
pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator
COORDINATES: protein motif:HMM:NF016991.2
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF036421.2
COORDINATES: similar to AA sequence:RefSeq:WP_011119264.1
COORDINATES: similar to AA sequence:RefSeq:WP_008683351.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008674004.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018002182.1
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: similar to AA sequence:RefSeq:WP_012913113.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008709171.1
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008673792.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655262.1
COORDINATES: protein motif:HMM:NF013236.2
FliM/FliN family flagellar motor C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007326305.1
GO:0016840 - carbon-nitrogen lyase activity [Evidence IEA]
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655339.1
bifunctional NADP-dependent methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002655209.1
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002654462.1
COORDINATES: similar to AA sequence:RefSeq:WP_008690994.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012910586.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655622.1
COORDINATES: similar to AA sequence:RefSeq:WP_007339869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913589.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002650187.1
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF015142.2
protein tyrosine phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012909944.1
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:NF005301.0
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655017.1
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: similar to AA sequence:RefSeq:WP_012910886.1
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:TIGR02984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012910528.1
COORDINATES: similar to AA sequence:RefSeq:WP_008694932.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650584.1
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: similar to AA sequence:RefSeq:WP_007324321.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005133237.1
GO:0003988 - acetyl-CoA C-acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012913034.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909896.1
COORDINATES: similar to AA sequence:RefSeq:WP_007329952.1
COORDINATES: similar to AA sequence:RefSeq:WP_002650256.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009098077.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: similar to AA sequence:RefSeq:WP_012912487.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_009093445.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913611.1
COORDINATES: similar to AA sequence:RefSeq:WP_012913609.1
COORDINATES: similar to AA sequence:RefSeq:WP_012911047.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_012911046.1
COORDINATES: similar to AA sequence:RefSeq:WP_007324152.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012909756.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008696809.1
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_008690502.1
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_002649990.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002655931.1
COORDINATES: protein motif:HMM:NF004826.0
COORDINATES: similar to AA sequence:RefSeq:WP_012911206.1
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: similar to AA sequence:RefSeq:WP_009094142.1
COORDINATES: similar to AA sequence:RefSeq:WP_002649933.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008697961.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008656012.1
COORDINATES: similar to AA sequence:RefSeq:WP_008663970.1
COORDINATES: similar to AA sequence:RefSeq:WP_003229455.1
COORDINATES: protein motif:HMM:NF015983.2
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01351.1
COORDINATES: similar to AA sequence:RefSeq:WP_002653715.1
COORDINATES: protein motif:HMM:NF020419.2
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: similar to AA sequence:RefSeq:WP_002655535.1
COORDINATES: similar to AA sequence:RefSeq:WP_002655727.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: similar to AA sequence:RefSeq:WP_008661153.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008690299.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_012909338.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008694157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012909342.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]