Mycobacterium paragordonae strain 49061 plasmid unnamed3, complete sequence.
type: Entry
definition: Mycobacterium paragordonae strain 49061 plasmid unnamed3, complete sequence.
sequence version: NZ_CP025549.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP025549.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08222636
keyword: RefSeq
source: Mycobacterium paragordonae
organism: Mycobacterium paragordonae
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP025549.1.\nBacteria and source DNA available from Department of Microbiology\nand Immunology, Seoul National University College of Medicine.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.2\nExpected Final Version :: yes\nGenome Coverage :: 38.19x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:43:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,518\nCDSs (total) :: 6,464\nGenes (coding) :: 6,337\nCDSs (with protein) :: 6,337\nGenes (RNA) :: 54\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 127\nCDSs (without protein) :: 127\nPseudo Genes (ambiguous residues) :: 0 of 127\nPseudo Genes (frameshifted) :: 40 of 127\nPseudo Genes (incomplete) :: 102 of 127\nPseudo Genes (internal stop) :: 9 of 127\nPseudo Genes (multiple problems) :: 21 of 127\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 26922
topology: circular
so has quality: SO_0000988
location: 1..26922
location: region:1-26922:1
RO_0002162: 1389713

NZ_CP025549
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08222636
type: BioSample
SIO_000068: biosample

1
title: Mycobacterium paragordonae strain 49061 isolate Asan medical center chromosome 1
author: Kim, B.-J.
journal: Unpublished

2
title: Direct Submission
author: Kim, B.-J.
journal: Submitted (27-DEC-2017) Department of Microbiology and Immunology, Seoul National University College of Medicine, 103 Daehak-ro (Yeongeon-dong), Jongno-gu, Seoul 03080, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26922:1
position: 26922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26922:1:source
so part of: sequence
organism: Mycobacterium paragordonae
mol type: genomic DNA
strain: 49061
isolation source: sputum sample
host: Homo sapiens
type material: type strain of Mycobacterium paragordonae
plasmid: unnamed3
country: South Korea: Seoul
collection date: 2010

1389713
type: Taxonomy
SIO_000068: taxonomy

C0J29_RS32350
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32350
old locus tag: C0J29_32335
so part of: sequence
location: 221..541
location: region:221-541:1
so has part: feature:221-541:1:exon
subclass of: SO_0000010

position:221:1
position: 221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541:1
position: 541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221-541:1:exon

C0J29_RS32350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32350
old locus tag: C0J29_32335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011557485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WhiB family transcriptional regulator
translation: MAAAVASWSAPVEGYVPSCTDDPERWTTTQPDTQAIALCVACPRRGWCAQQAYRVPGVQGLWAGVVVPESGQRAREFALRRLRVLAERGGYHVAPRRRGRPRGSRN
SIO_010081: C0J29_RS32350
subclass of: SO_0000673
so part of: C0J29_RS32350
location: 221..541
location: region:221-541:1
so has part: feature:221-541:1:exon

WP_120795257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221-541:1:exon

C0J29_RS32355
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32355
old locus tag: C0J29_32340
so part of: sequence
location: complement(580..981)
location: region:580-981:-1
so has part: feature:580-981:-1:exon
subclass of: SO_0000010

position:580:-1
position: 580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981:-1
position: 981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580-981:-1:exon

C0J29_RS32355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32355
old locus tag: C0J29_32340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007170454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSAGQSAESRLAIDTAAQPHWMRTGYKFFPYAAKQSGQWWVLRLNFGFPEHDMYTLFVDAKPVVDITDNPTHPAALVRSIAALNNSATPLPVLDTGTASTVISKVARYVNYGSEHGDPCDFCSYDHDGMTRM
SIO_010081: C0J29_RS32355
subclass of: SO_0000673
so part of: C0J29_RS32355
location: complement(580..981)
location: region:580-981:-1
so has part: feature:580-981:-1:exon

WP_120795258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580-981:-1:exon

C0J29_RS32360
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32360
old locus tag: C0J29_32345
so part of: sequence
location: complement(1064..1750)
location: region:1064-1750:-1
so has part: feature:1064-1750:-1:exon
subclass of: SO_0000010

position:1064:-1
position: 1064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750:-1
position: 1750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064-1750:-1:exon

C0J29_RS32360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32360
old locus tag: C0J29_32345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014137498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent phosphohydrolase
translation: MTTDSRQTANLIVQWRTLVATCNGASQYADDICRAVLTGWDEPHRRYHNITHLRDVLCCVDELAAHASDANAVRFAAWYHDIVYRGQPNDEHNSARRAEHDMSALRLPPALIGEVARLIRLTAHHDPAPDDYNGETLCDADLAILAAPPDRYANYTNAIRAEYAHLSDDAFREGRSKILHALLEAPALYRTPTAHASWTAQAHTNLHTELHHLTGSTTAPASGASNSQ
SIO_010081: C0J29_RS32360
subclass of: SO_0000673
so part of: C0J29_RS32360
location: complement(1064..1750)
location: region:1064-1750:-1
so has part: feature:1064-1750:-1:exon

WP_197748267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1064-1750:-1:exon

C0J29_RS33180
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS33180
so part of: sequence
location: complement(1985..3202)
location: region:1985-3202:-1
so has part: feature:1985-3202:-1:exon
subclass of: SO_0000010

position:1985:-1
position: 1985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202:-1
position: 3202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985-3202:-1:exon

C0J29_RS33180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS33180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDLLDDWLRTIDTLDQQAETYNRYTQRPGGSSWEGMTAEATQTRAGQDYRAVASLRACVERATTQIRNTVTSTLMPPLSNAQQIIANAEASPGVTVNEDLSITYTPPAGTSQETADANNKVVAAAAAELKESAQEWWSAENQVAQQIRDAQSAISNAANFGPTAPHFSRRARIQTVDRHWKQDPAQPTPNPAADLGLPDYQPGSLSNDEARAVYTQGELNMRQLNERLTQLGLNPEQRAKIMFDQRNSLRTWVRDLMSNRTRAAELAASEPNMTYEQIIAKNQAKGLVGNNLYNAIIDSSTRSRASVNDSMGIDPQRPPPLPPVRPSAPIEGAPAAEPRLEPPAAGRGGPTGPEGGTGSPRAGGVGPNAGAGGTLGGGGGAGGARGGGGGGIMRPFPEPGMPQW
SIO_010081: C0J29_RS33180
subclass of: SO_0000673
so part of: C0J29_RS33180
location: complement(1985..3202)
location: region:1985-3202:-1
so has part: feature:1985-3202:-1:exon

WP_162951707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1985-3202:-1:exon

C0J29_RS32370
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32370
old locus tag: C0J29_32355
so part of: sequence
location: complement(3260..3577)
location: region:3260-3577:-1
so has part: feature:3260-3577:-1:exon
subclass of: SO_0000010

position:3260:-1
position: 3260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3577:-1
position: 3577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3260-3577:-1:exon

C0J29_RS32370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32370
old locus tag: C0J29_32355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDHLRVDLDALSRLLPQLRELAEQVKAGIPGHLLDKNQDMVPSLAAAHEMSATTLPAVRRAVADQLTKVAQMVEDARLGFLTSDEQPPGASNSVPMPPSAATLA
SIO_010081: C0J29_RS32370
subclass of: SO_0000673
so part of: C0J29_RS32370
location: complement(3260..3577)
location: region:3260-3577:-1
so has part: feature:3260-3577:-1:exon

WP_162951708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3260-3577:-1:exon

C0J29_RS32375
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32375
old locus tag: C0J29_32360
so part of: sequence
location: complement(3888..4220)
location: region:3888-4220:-1
so has part: feature:3888-4220:-1:exon
subclass of: SO_0000010

position:3888:-1
position: 3888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4220:-1
position: 4220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3888-4220:-1:exon

C0J29_RS32375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32375
old locus tag: C0J29_32360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQALRTGIVPERHELARLLGKNIDDIPEPDNEAANQETRSKPEDPDAEAFRARYHAMVNEKIIDWLDEHPEHGKHVPAEPRQRIEDDCRRQIQHQWAFHRRRLAEQDED
SIO_010081: C0J29_RS32375
subclass of: SO_0000673
so part of: C0J29_RS32375
location: complement(3888..4220)
location: region:3888-4220:-1
so has part: feature:3888-4220:-1:exon

WP_162951709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3888-4220:-1:exon

C0J29_RS32380
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32380
old locus tag: C0J29_32365
so part of: sequence
location: complement(4265..4804)
location: region:4265-4804:-1
so has part: feature:4265-4804:-1:exon
subclass of: SO_0000010

position:4265:-1
position: 4265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4804:-1
position: 4804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265-4804:-1:exon

C0J29_RS32380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32380
old locus tag: C0J29_32365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010948803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAADTAASVEWTDMTGKTLIAAGAVVVAVLSGCTAHAEPSKFPDLSGYTPVNIADYRIDMTTPGHPSSEIYFLTPDGITCNFPIGAAQCRGNNLPGIPPAEGSGVNWIGTDTGLKQTNEGPVSGVVHGQQVKTLPPFHSITLSGVICGVDDKRMTACKDPQGRGFVLSPSWSGWIPKV
SIO_010081: C0J29_RS32380
subclass of: SO_0000673
so part of: C0J29_RS32380
location: complement(4265..4804)
location: region:4265-4804:-1
so has part: feature:4265-4804:-1:exon

WP_120795263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4265-4804:-1:exon

C0J29_RS32385
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32385
old locus tag: C0J29_32370
so part of: sequence
location: complement(4801..6444)
location: region:4801-6444:-1
so has part: feature:4801-6444:-1:exon
subclass of: SO_0000010

position:4801:-1
position: 4801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6444:-1
position: 6444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4801-6444:-1:exon

C0J29_RS32385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32385
old locus tag: C0J29_32370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010948804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4185 domain-containing protein
translation: MSRPQKSTVYKANANALGDMATPLRETATKLASSGERVHNTVHDFDWQGQARDAAAVRADRELTQDRIVAADMNALADAYENGRDTMQPIIDGLKAKAQGLEADHFAVSEDWVVTDTYDYAAAKKLATLMGLDDSAINALQAQRANEAATETGNLQRLADALGTADADTAAAINNATAALTGAGTPLVLPPGLARGQVANLGPVAGTGANIPGIGAADLGEIIQLPNGQYVAVLGDSYRGNRMGEGQHFPSVAVPVTFDAQGRAHFGAPLTGPDGANVLFPLPQAAKDAGANNALPAGSVTTRDGRTYMMVVGTNTNEGLAPKGGSWLVEVTNNPAGGWKPIEASYKPWASITNPTAGIPGEPPRVSDPIKAPTQISGYQGKDGTIYIAADGFDRHQGVTMYRVDPDHITDRNAWQPWTGTGWGQAGETSAQQALRLSGDNFGELSFRELGGKPVLSGFNGSAGNTEVHVGSGLPTQIFDNGRGQVTVVAAGGPWGEPGAVPQNYGGYIMPGATLDNMRILVSQWNTTPANPGIPYTVEQFQVNPNQ
SIO_010081: C0J29_RS32385
subclass of: SO_0000673
so part of: C0J29_RS32385
location: complement(4801..6444)
location: region:4801-6444:-1
so has part: feature:4801-6444:-1:exon

WP_242460745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4801-6444:-1:exon

C0J29_RS32390
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32390
old locus tag: C0J29_32375
so part of: sequence
location: complement(6483..6833)
location: region:6483-6833:-1
so has part: feature:6483-6833:-1:exon
subclass of: SO_0000010

position:6483:-1
position: 6483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6833:-1
position: 6833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6483-6833:-1:exon

C0J29_RS32390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32390
old locus tag: C0J29_32375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTILQVNPANLRSGAGSIDAEKATVAGLAVPDATAAMAGLTGFATAGVLAAAHDAVVSALKVAGGRFELMAALLRQTADTFEIADLVTPGLVKPPWMSQHVGEGLTAMGEMNLSRH
SIO_010081: C0J29_RS32390
subclass of: SO_0000673
so part of: C0J29_RS32390
location: complement(6483..6833)
location: region:6483-6833:-1
so has part: feature:6483-6833:-1:exon

WP_120795264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6483-6833:-1:exon

C0J29_RS32395
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32395
old locus tag: C0J29_32380
so part of: sequence
location: complement(7060..7803)
location: region:7060-7803:-1
so has part: feature:7060-7803:-1:exon
subclass of: SO_0000010

position:7060:-1
position: 7060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7803:-1
position: 7803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7060-7803:-1:exon

C0J29_RS32395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32395
old locus tag: C0J29_32380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012395201.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAVGGLDVVDDLGRAQWLTESVCGFADNVGSLIPATFAAYARVLHPAYNHDGAEPKLVSWAEIARANHKIVHPRMQFTRLIGYASRYVVEYHDSQPGLFDTAPAVGTLPPATAASLARTLSRHTTNADHCWFAVWSGFGDLDQAFHDRPTFALPGRDYYLAHGPIAAASQSVSTDTHYSSHRSVNLWWPDDHAWCVATEIDLDSTYLGASQACIEQLTTNSDLETMPLNVTAGITADSDTLNPAPP
SIO_010081: C0J29_RS32395
subclass of: SO_0000673
so part of: C0J29_RS32395
location: complement(7060..7803)
location: region:7060-7803:-1
so has part: feature:7060-7803:-1:exon

WP_120795279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7060-7803:-1:exon

C0J29_RS32400
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32400
old locus tag: C0J29_32385
so part of: sequence
location: 8088..8351
location: region:8088-8351:1
so has part: feature:8088-8351:1:exon
subclass of: SO_0000010

position:8088:1
position: 8088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8351:1
position: 8351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8088-8351:1:exon

C0J29_RS32400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32400
old locus tag: C0J29_32385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGPPECEIRFHRDFAGGVHVEYATSTFWFVQHELGLADSSWDFDGEHVSINAVNGKWAWKLTGKEYVYDYGPDVEPVVMLEGIRIG
SIO_010081: C0J29_RS32400
subclass of: SO_0000673
so part of: C0J29_RS32400
location: 8088..8351
location: region:8088-8351:1
so has part: feature:8088-8351:1:exon

WP_162951710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8088-8351:1:exon

C0J29_RS32405
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32405
old locus tag: C0J29_32390
so part of: sequence
location: complement(8627..8857)
location: region:8627-8857:-1
so has part: feature:8627-8857:-1:exon
subclass of: SO_0000010

position:8627:-1
position: 8627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8857:-1
position: 8857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8627-8857:-1:exon

C0J29_RS32405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32405
old locus tag: C0J29_32390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQTNERPTDPNPPLPQRMRNWMQRAALTAATNNIIVTERLLRVRGLIDPPTRLQDPALLFHILATNIRHPRRQPS
SIO_010081: C0J29_RS32405
subclass of: SO_0000673
so part of: C0J29_RS32405
location: complement(8627..8857)
location: region:8627-8857:-1
so has part: feature:8627-8857:-1:exon

WP_162951711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8627-8857:-1:exon

C0J29_RS32415
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32415
old locus tag: C0J29_32400
so part of: sequence
location: 9512..9784
location: region:9512-9784:1
so has part: feature:9512-9784:1:exon
subclass of: SO_0000010

position:9512:1
position: 9512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9784:1
position: 9784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9512-9784:1:exon

C0J29_RS32415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32415
old locus tag: C0J29_32400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSASHRARAAVVSRGDQVRVILAGHPYCGRVGTVVEVLDHTHDLDTVVAVDGVEPNLFAFLYGEITMMESGRARKVHPFGTACSLSLNTL
SIO_010081: C0J29_RS32415
subclass of: SO_0000673
so part of: C0J29_RS32415
location: 9512..9784
location: region:9512-9784:1
so has part: feature:9512-9784:1:exon

WP_162951712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9512-9784:1:exon

C0J29_RS33185
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS33185
so part of: sequence
location: complement(9817..10455)
location: region:9817-10455:-1
so has part: feature:9817-10455:-1:exon
subclass of: SO_0000010

position:9817:-1
position: 9817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10455:-1
position: 10455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9817-10455:-1:exon

C0J29_RS33185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS33185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIERGVALPRQDTEVMVDGNRHPVLQANDIAKTVDWQGDPLTQRQVAEASEWLRDQEYISGTRAWGHGVVRPSITPKGEALTDMGKSVRGGNSPTDPKGTTTIRIRNSANIAIHSPAAQQSYSVSSQVLEKVNTVANALDDAAQALNASPKAATEAQHTATEIRAETSRPKPDLDKLKRLLFFAMTGIAAALGPTAGTDLAHLASKALQDF
SIO_010081: C0J29_RS33185
subclass of: SO_0000673
so part of: C0J29_RS33185
location: complement(9817..10455)
location: region:9817-10455:-1
so has part: feature:9817-10455:-1:exon

WP_162951713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9817-10455:-1:exon

C0J29_RS33190
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS33190
so part of: sequence
location: complement(10597..10767)
location: region:10597-10767:-1
so has part: feature:10597-10767:-1:exon
subclass of: SO_0000010

position:10597:-1
position: 10597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10767:-1
position: 10767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10597-10767:-1:exon

C0J29_RS33190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS33190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADTQAQDIQHTAGAPSEESSTVTTKFVVTKQHRRFAEFCDAVRRDRYIGLCHGAP
SIO_010081: C0J29_RS33190
subclass of: SO_0000673
so part of: C0J29_RS33190
location: complement(10597..10767)
location: region:10597-10767:-1
so has part: feature:10597-10767:-1:exon

WP_162951705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10597-10767:-1:exon

C0J29_RS32420
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32420
old locus tag: C0J29_32405
so part of: sequence
location: complement(10775..12295)
location: region:10775-12295:-1
so has part: feature:10775-12295:-1:exon
subclass of: SO_0000010

position:10775:-1
position: 10775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12295:-1
position: 12295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10775-12295:-1:exon

C0J29_RS32420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32420
old locus tag: C0J29_32405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187124.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MTDADEPLSARDEAITELTGVQREQAMARYAVLRPHLEDGISLAEAARQSGVALRTVQRWLAGYRKSGLAGLARPARSDRGRRGLPDQLVTLIEGLALRRPPLSAANIHRQVTQIAPQRDWPVPSYSTVYAVVAGLDPGLRMLAHEGTKRYEEVFDLVYRRQASGPNELWQADHTELDLWVITPSAKPARPWLTVIEDDQSRAAAGYMVSLEAPSAINTALALRQAIWRKPDPGWPVCGIPGVFYTDHGSDFTSRHMETVAVELKIQLVFSLPGKPRGRGKIERLFNSINQMCLSTLPGYAPPGTPDRAGQARLTLPELDAAIGQFLTGDYHHRIHSETRQTPAQRWSTGGFLPRMPDSLEQLDLLLLTVAQPRKIHPDGVHFQGLRYLDPVLAAYVGEQVTIRYDPRDLAEIRIFHDDKFLCRAICPELAGTTVALKEITAARNGRRRELRQGLRERAKVVDQLIAVHQSDYNHPLPGMAGAATEPSDLDQDSAPRHALKLYRED
SIO_010081: C0J29_RS32420
subclass of: SO_0000673
so part of: C0J29_RS32420
location: complement(10775..12295)
location: region:10775-12295:-1
so has part: feature:10775-12295:-1:exon

WP_244218057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10775-12295:-1:exon

C0J29_RS32425
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32425
old locus tag: C0J29_32410
so part of: sequence
location: complement(12292..12888)
location: region:12292-12888:-1
so has part: feature:12292-12888:-1:exon
subclass of: SO_0000010

position:12292:-1
position: 12292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12888:-1
position: 12888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12292-12888:-1:exon

C0J29_RS32425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32425
old locus tag: C0J29_32410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019936938.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRIGYGRVSTRDQHPEAQRDALAAAGCDQIFLDKASGKLARRPELDKALLSANRVGDQLVVTKLDRLGRSLEHLIELSKRLQGSGVDLVVLDQGIDTSTAVGRMFFQILGAIAEFEHALMSERTMDGLAAARARGRTGGQKPKLGPRQVALAQAMYAELAEDGKRRYTVAQIAAEFGVTRPTIYRHLGKALNTSSAAS
SIO_010081: C0J29_RS32425
subclass of: SO_0000673
so part of: C0J29_RS32425
location: complement(12292..12888)
location: region:12292-12888:-1
so has part: feature:12292-12888:-1:exon

WP_120795269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12292-12888:-1:exon

C0J29_RS33195
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS33195
so part of: sequence
location: complement(13126..13665)
location: region:13126-13665:-1
so has part: feature:13126-13665:-1:exon
subclass of: SO_0000010

position:13126:-1
position: 13126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13665:-1
position: 13665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13126-13665:-1:exon

C0J29_RS33195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS33195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNKIPLPCSTTIDSTLSHRTRRRLSRASGGWLCFYSGVTSEDWSTLAGLREVSRVRSGRIPGWSAPVAYAVGFFDGREWKFPYVNRPGGTHDLPAVMLAEVVGYGGGTHEFHLTAEQLAIAIAKLAPAEAVSDVDHPNLMSWRSIAAAAPSQIAAVFVGSLEDQPAGNADVALRLLLV
SIO_010081: C0J29_RS33195
subclass of: SO_0000673
so part of: C0J29_RS33195
location: complement(13126..13665)
location: region:13126-13665:-1
so has part: feature:13126-13665:-1:exon

WP_162951706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13126-13665:-1:exon

C0J29_RS32435
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32435
old locus tag: C0J29_32420
pseudo: true
so part of: sequence
location: 13628..14290
location: region:13628-14290:1
so has part: feature:13628-14290:1:exon
subclass of: SO_0000010

position:13628:1
position: 13628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14290:1
position: 14290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13628-14290:1:exon

C0J29_RS32435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32435
old locus tag: C0J29_32420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007171119.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HAD-IA family hydrolase
SIO_010081: C0J29_RS32435
subclass of: SO_0000673
so part of: C0J29_RS32435
location: 13628..14290
location: region:13628-14290:1
so has part: feature:13628-14290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13628-14290:1:exon

C0J29_RS32440
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32440
old locus tag: C0J29_32425
so part of: sequence
location: 14420..15019
location: region:14420-15019:1
so has part: feature:14420-15019:1:exon
subclass of: SO_0000010

position:14420:1
position: 14420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15019:1
position: 15019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14420-15019:1:exon

C0J29_RS32440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32440
old locus tag: C0J29_32425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172446.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSAILGYARVSTAGQDLDAQLVALATAGVDAERVFIDKLSGSAKTDRPGLAAVLDYARAEDTLVVCAIDRLGRSVFEVTRTITELGERRITLRALREGIDTATSTGRAVAAIMATLAELELELGRERRAASRDSRRSRQLPATKPPKLTADRQEQLRRLAATGEPVRELAAAFGIGRATAYRYLAAGSALGSHEYAGRQ
SIO_010081: C0J29_RS32440
subclass of: SO_0000673
so part of: C0J29_RS32440
location: 14420..15019
location: region:14420-15019:1
so has part: feature:14420-15019:1:exon

WP_120795281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14420-15019:1:exon

C0J29_RS32445
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32445
old locus tag: C0J29_32430
so part of: sequence
location: 15003..15485
location: region:15003-15485:1
so has part: feature:15003-15485:1:exon
subclass of: SO_0000010

position:15003:1
position: 15003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15485:1
position: 15485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15003-15485:1:exon

C0J29_RS32445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32445
old locus tag: C0J29_32430
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020113196.1
GO function: GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaI family thioesterase
translation: MPEDSDAAGAGQRPPLTPEQLTALTASLFEGHIGLQFSEIGADRVRANLTIRPELCQGTGVTHGGVYCSMAESVASMGASIALNGKGYAVGINNNTDFLRATRDGVLTAEGTPVFRGRQQQLWRVVITGSDGRECAQAHVRLQNVMVDPAQALRIGRPLA
SIO_010081: C0J29_RS32445
subclass of: SO_0000673
so part of: C0J29_RS32445
location: 15003..15485
location: region:15003-15485:1
so has part: feature:15003-15485:1:exon

WP_120795271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15003-15485:1:exon

C0J29_RS32450
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32450
old locus tag: C0J29_32435
so part of: sequence
location: 15566..16579
location: region:15566-16579:1
so has part: feature:15566-16579:1:exon
subclass of: SO_0000010

position:15566:1
position: 15566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16579:1
position: 16579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15566-16579:1:exon

C0J29_RS32450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32450
old locus tag: C0J29_32435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020516811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-phosphate dependent enzyme
translation: MLKTRLDTARIRAARQVIDPIFLDTPLYRCEALEPDLGCTVSIKLETANPVRSFKARGTEVVASLLADKGSSAVVCGSAGNLGQALAWSGRARGLEVTVVASRFAPAVKLDRIRALGARLELVDGDNEMARVRAAAIARHDGIGLLDDSLDIETCEGAATIGLELVDAGSSFDAVLIALGGGALATGIGHVMKALAPDVEVICVQPAGAPAMTRSWRQRRVVTTDSVDTIADAVAGRCPIPEVLDDLLLVGDDAVLVQEASIIAGMRVLLKDAGLIVEPSAALGIAAILEDRDRFADRHVITIVCGSNVDLDAYHRWVGAGTEDPLTLNQRVLRRKP
SIO_010081: C0J29_RS32450
subclass of: SO_0000673
so part of: C0J29_RS32450
location: 15566..16579
location: region:15566-16579:1
so has part: feature:15566-16579:1:exon

WP_120795272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15566-16579:1:exon

C0J29_RS32455
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32455
old locus tag: C0J29_32440
so part of: sequence
location: complement(16946..17368)
location: region:16946-17368:-1
so has part: feature:16946-17368:-1:exon
subclass of: SO_0000010

position:16946:-1
position: 16946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17368:-1
position: 17368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16946-17368:-1:exon

C0J29_RS32455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32455
old locus tag: C0J29_32440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018601125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MPDDQHQERRRPGQDGQSPLSTLIHLPALVVLDRIPVAVLAISHDGTILFTNSTFASMLGYSLKSLHTLKFSQLFTTLPTDQSSPVSVMRLHGGELVELVHADGSTVRAWMSKSALLRDDDPVALVTFQDLTAQLWQQDD
SIO_010081: C0J29_RS32455
subclass of: SO_0000673
so part of: C0J29_RS32455
location: complement(16946..17368)
location: region:16946-17368:-1
so has part: feature:16946-17368:-1:exon

WP_085088562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16946-17368:-1:exon

C0J29_RS32460
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32460
old locus tag: C0J29_32445
so part of: sequence
location: complement(17658..18113)
location: region:17658-18113:-1
so has part: feature:17658-18113:-1:exon
subclass of: SO_0000010

position:17658:-1
position: 17658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18113:-1
position: 18113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17658-18113:-1:exon

C0J29_RS32460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32460
old locus tag: C0J29_32445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008258384.1
GO function: GO:0045152 - antisigma factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor antagonist
translation: MGSTEMLPSPAHLSKEFAFMTNANDSLLRATTERRGLAVLLCAGGEIDASNVRTWRQIVRAAAHATAAPGPLVVDTSGLDFMAVCAFGVLVEASQQCRARGIELRLVSSQPITARIIAAARLQSELPLYLHKSAALHPPPRRGLPNRQPNG
SIO_010081: C0J29_RS32460
subclass of: SO_0000673
so part of: C0J29_RS32460
location: complement(17658..18113)
location: region:17658-18113:-1
so has part: feature:17658-18113:-1:exon

WP_120795273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17658-18113:-1:exon

C0J29_RS32465
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32465
old locus tag: C0J29_32450
so part of: sequence
location: complement(18566..18958)
location: region:18566-18958:-1
so has part: feature:18566-18958:-1:exon
subclass of: SO_0000010

position:18566:-1
position: 18566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18958:-1
position: 18958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18566-18958:-1:exon

C0J29_RS32465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32465
old locus tag: C0J29_32450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAKPSGLQLGSTRPLSRAERRAEAARVKAEETSATPAATVSRSDDEIPPAPVVTPDQRNEAAEPPVRLKARQRKAKSPFATQLHSGTLARLEWIKARGYAITDTVDDAINTYLDGAGIPRPDHNDRMPL
SIO_010081: C0J29_RS32465
subclass of: SO_0000673
so part of: C0J29_RS32465
location: complement(18566..18958)
location: region:18566-18958:-1
so has part: feature:18566-18958:-1:exon

WP_120795274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18566-18958:-1:exon

C0J29_RS32470
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32470
old locus tag: C0J29_32455
so part of: sequence
location: complement(18955..19761)
location: region:18955-19761:-1
so has part: feature:18955-19761:-1:exon
subclass of: SO_0000010

position:18955:-1
position: 18955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19761:-1
position: 19761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19761:-1:exon

C0J29_RS32470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32470
old locus tag: C0J29_32455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017555459.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MNVSAGERCEIVAVALQKGGVGKTTTTINLGANLATMGFRVLVIDMDQQAHSTKGLGVELGADDASMYEVLHPDRAMRVPLAKVIRPSQFGIDVAPGHLALKELERTGLGSGGQLRLARQLDDIDDYDFVLMDCPPALGELTTAALAAADYVLAVLKAGPDEVDGLVELGNAILDVQETLNPAVEIRYVLLTDFDGNPKASKDVRKQLRADWGEWDAGGAYLGEIPHTVRVVEAKGKRVPVHVHAPTSTAAVAYREVAERIAARRQAA
SIO_010081: C0J29_RS32470
subclass of: SO_0000673
so part of: C0J29_RS32470
location: complement(18955..19761)
location: region:18955-19761:-1
so has part: feature:18955-19761:-1:exon

WP_085088571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19761:-1:exon

C0J29_RS32475
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32475
old locus tag: C0J29_32460
so part of: sequence
location: 20148..20759
location: region:20148-20759:1
so has part: feature:20148-20759:1:exon
subclass of: SO_0000010

position:20148:1
position: 20148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20759:1
position: 20759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20148-20759:1:exon

C0J29_RS32475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32475
old locus tag: C0J29_32460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPDAVIPASVPGELLLIRTEEVAVSIGSICAYPNGFEFTAHVRRRGSDHSEPGWHDPFGRFGQRGPQASSGDALRLGLFYADGRRGATTGGHWGPGDPDGLVLMPAGAGGSARRWDGKFWVYPLPPEGPVTFVAAWPKYALAETQAELDGAAIRAASGRAVTLWPEESEISPGGGGWSSQTLTAYQTAEPESAAEQPPHPQQ
SIO_010081: C0J29_RS32475
subclass of: SO_0000673
so part of: C0J29_RS32475
location: 20148..20759
location: region:20148-20759:1
so has part: feature:20148-20759:1:exon

WP_120795275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20148-20759:1:exon

C0J29_RS32480
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32480
old locus tag: C0J29_32465
so part of: sequence
location: 21399..21932
location: region:21399-21932:1
so has part: feature:21399-21932:1:exon
subclass of: SO_0000010

position:21399:1
position: 21399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21932:1
position: 21932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21399-21932:1:exon

C0J29_RS32480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32480
old locus tag: C0J29_32465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005117341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTARHIYVDETKHRDYLMVAAVVLGEDLTSARAVVQELLKPGQRHLHMKDEADGRKETIAKALVSADLRATVYDAGRRHRTQVLARAACLSALVEDLATSNVETLIVLDQDESLVQSDRRLLYGAVRAAGCEATVRYEHRRAASERLLAIPDAFAWCWAKGGRWRSHIRPVVTVQPV
SIO_010081: C0J29_RS32480
subclass of: SO_0000673
so part of: C0J29_RS32480
location: 21399..21932
location: region:21399-21932:1
so has part: feature:21399-21932:1:exon

WP_120795276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21399-21932:1:exon

C0J29_RS32485
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32485
old locus tag: C0J29_32470
so part of: sequence
location: 22178..22390
location: region:22178-22390:1
so has part: feature:22178-22390:1:exon
subclass of: SO_0000010

position:22178:1
position: 22178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22390:1
position: 22390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22178-22390:1:exon

C0J29_RS32485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32485
old locus tag: C0J29_32470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toxin-antitoxin system
translation: MAQSRSTHKGDRAQIMARPDRIVYDIVKQEAAARGIPMGQYVADVLAAHVGHPELVRELNKKMEVLPLAM
SIO_010081: C0J29_RS32485
subclass of: SO_0000673
so part of: C0J29_RS32485
location: 22178..22390
location: region:22178-22390:1
so has part: feature:22178-22390:1:exon

WP_085088580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22178-22390:1:exon

C0J29_RS32490
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
locus tag: C0J29_RS32490
old locus tag: C0J29_32475
so part of: sequence
location: 22727..23938
location: region:22727-23938:1
so has part: feature:22727-23938:1:exon
subclass of: SO_0000010

position:22727:1
position: 22727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23938:1
position: 23938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22727-23938:1:exon

C0J29_RS32490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
locus tag: C0J29_RS32490
old locus tag: C0J29_32475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MVRTTPTAQVLAMRRGRRLAGRPVPTPSAFVGLELDDQAYAGVPCWSAGPTGWAHITVAVTYDLHYGRVRPLMCNGGIAKPALVVIAAAMARYADWRTGRGCRPTNTQLAADTGYDERTIQRAHECLRLLGVATEILRGRQRTYTERMASWRLGDRHRGWASVWALHDNAHLTRLVHSLSPHLERSPVTTTPPCSVRLITTRAGAHRARHHGATRRRAPDEAGRRLAGRWRADPHAPAWARMFSANSWAAMLAAPARHGWTPHDLTALVADWLGTGHWIPDRPARPIALLGTLLAWHSAHNTLAARPSALDEARAVHAEAARAARQMARDADHCAHLLGRTAARMAATGPGRAAAFAELAAVRRRAALRRTATAAADHARMSGLVEHARRDHHRAPAADRRDP
SIO_010081: C0J29_RS32490
subclass of: SO_0000673
so part of: C0J29_RS32490
location: 22727..23938
location: region:22727-23938:1
so has part: feature:22727-23938:1:exon

WP_242460746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22727-23938:1:exon

C0J29_RS32495
type: Gene
subclass of: SO_0000704
RO_0002162: 1389713
gene: mobF
locus tag: C0J29_RS32495
old locus tag: C0J29_32480
so part of: sequence
location: 24070..26922
location: region:24070-26922:1
so has part: feature:24070-26922:1:exon
subclass of: SO_0000010

position:24070:1
position: 24070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24070-26922:1:exon

C0J29_RS32495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1389713
gene: mobF
locus tag: C0J29_RS32495
old locus tag: C0J29_32480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008264024.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLTIAKLSRWSIAYYNDTANAVGMAARDARCANGGLGEYYAEGDTRTPVWVCAGDGRTAAELVGLSDAQRVGGEADTGVVGRWLDEGVAPSGLCGRALGKGSVHGFDLTFCAPKSVSLLRALHPNDVTQKAVVNAHTAALAEALEYLAEHAGYTRVHNPVTGDKDLVRLPGIVAVAYQHETSRAGDPHLHTHVIVPNRQARADGKLVSLDGMSLFHEARAAGVIYQVTLRRELHRAIGVEWSPIDPATGMAEVAAIDPGSITAWSQRASALRAWAAKNLVVIDPAVGPTPAQLAAAQKATRPGKPEQLAWAELRRLWREDPRGWTIDRDAHQAARQARQARATRGVWSRSRLVEAAEARGKAVLTRADLVELIGAQLPVDIDGDPRSPREVIEATVEQLGMRISGPRAAHQREGSQRFTLDKILAAEARLLELVDARDERGQLYGLRDLDVAGLSADQARAVTNIAWLPWLVCPLSAPAGAGKTTSMRALRIGARHSGKRVLVIAPTGKAVDVAVREGAGDTGMTVAAALTALRDETLVLNERTVVIVDEAAMVGTTELRALLAATTAAGAKTVLVGDAHQLAPVKACGGMFAQLCVDLPWTQTLSQVWRMSDPGERAASLALREGGPAPVRRAVGWYAGHGRLRCGDPIAMAADALEAYRADIAAGKDALLVCDTTEIADALNQRLHDDTLNARDPHAPPAPTITAARGHQLAVGDLILTRRNTPDITVLAAADNTRRVDAPVRNGQRWQVLAVDPAGDRIAARRLGDGARAAFSGDYLHEQVTHGYAVTVHSAQGVTADTTHAVLGERASRALLYVAMTRGRHTNTAYLYERQATETAHEHRDQPGMHVLHRGTTSDAVGLVRTVIAHREEQAHSAHHVAASNDPRQLPDIVRGLLVRRTHALNARQRTYRAWRDQQLEVILEQRRWVEQHLHRTREHERDRSYGLEL
SIO_010081: C0J29_RS32495
subclass of: SO_0000673
so part of: C0J29_RS32495
location: 24070..26922
location: region:24070-26922:1
so has part: feature:24070-26922:1:exon

WP_162951714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24070-26922:1:exon