Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium.
Mycobacterium paragordonae strain 49061 isolate Asan medical center chromosome 1
Submitted (27-DEC-2017) Department of Microbiology and Immunology, Seoul National University College of Medicine, 103 Daehak-ro (Yeongeon-dong), Jongno-gu, Seoul 03080, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP025547.1.\nBacteria and source DNA available from Department of Microbiology\nand Immunology, Seoul National University College of Medicine.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.2\nExpected Final Version :: yes\nGenome Coverage :: 38.19x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:43:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,518\nCDSs (total) :: 6,464\nGenes (coding) :: 6,337\nCDSs (with protein) :: 6,337\nGenes (RNA) :: 54\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 127\nCDSs (without protein) :: 127\nPseudo Genes (ambiguous residues) :: 0 of 127\nPseudo Genes (frameshifted) :: 40 of 127\nPseudo Genes (incomplete) :: 102 of 127\nPseudo Genes (internal stop) :: 9 of 127\nPseudo Genes (multiple problems) :: 21 of 127\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Mycobacterium paragordonae
COORDINATES: similar to AA sequence:RefSeq:WP_007171655.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014942239.1
COORDINATES: similar to AA sequence:RefSeq:WP_014816603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011904680.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008257429.1
COORDINATES: similar to AA sequence:RefSeq:WP_020215879.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018218482.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007171664.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006947236.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_005438220.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009738782.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015302746.1
COORDINATES: similar to AA sequence:RefSeq:WP_012394269.1
COORDINATES: similar to AA sequence:RefSeq:WP_008257347.1
COORDINATES: similar to AA sequence:RefSeq:WP_015357274.1
copper-sensing transcriptional repressor CsoR
COORDINATES: similar to AA sequence:RefSeq:WP_013827102.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012394270.1
COORDINATES: similar to AA sequence:RefSeq:NP_215482.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:NP_216314.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006247481.1
COORDINATES: similar to AA sequence:RefSeq:WP_011767787.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_006247483.1
COORDINATES: similar to AA sequence:RefSeq:WP_015297726.1
COORDINATES: similar to AA sequence:RefSeq:WP_015297727.1
COORDINATES: protein motif:HMM:NF014520.2
COORDINATES: protein motif:HMM:NF022231.2
COORDINATES: protein motif:HMM:NF013021.2
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_007170675.1
helix-turn-helix domain-containing protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_005149396.1
COORDINATES: similar to AA sequence:RefSeq:WP_003410014.1
COORDINATES: similar to AA sequence:RefSeq:NP_216507.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:NF013618.2
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006244103.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172345.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007172344.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172343.1
GO:0009986 - cell surface [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_216863.1
COORDINATES: similar to AA sequence:RefSeq:NP_216862.1
COORDINATES: protein motif:HMM:NF025377.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_007172337.1
type VII secretion integral membrane protein EccD
COORDINATES: similar to AA sequence:RefSeq:NP_216312.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
type VII secretion-associated serine protease mycosin
COORDINATES: protein motif:HMM:TIGR03923.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011894074.1
COORDINATES: similar to AA sequence:RefSeq:WP_011894889.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
translation initiation factor IF-2 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007172330.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172329.1
COORDINATES: protein motif:HMM:NF024056.2
COORDINATES: similar to AA sequence:RefSeq:WP_005148401.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172321.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:TIGR04255.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172307.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011767735.1
COORDINATES: similar to AA sequence:RefSeq:WP_011767736.1
COORDINATES: similar to AA sequence:RefSeq:WP_006247570.1
COORDINATES: similar to AA sequence:RefSeq:WP_006247759.1
COORDINATES: similar to AA sequence:RefSeq:WP_006243427.1
COORDINATES: similar to AA sequence:RefSeq:WP_006243420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006243426.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612203.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008259184.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014379321.1
COORDINATES: similar to AA sequence:RefSeq:WP_007450841.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012379801.1
COORDINATES: similar to AA sequence:RefSeq:WP_011767746.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172412.1
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_076612236.1
COORDINATES: similar to AA sequence:RefSeq:WP_007171685.1
COORDINATES: similar to AA sequence:RefSeq:WP_014941202.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003923726.1
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:NP_215267.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:NP_215266.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003919310.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005632268.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003887014.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003887015.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888461.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003887017.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308502.1
GO:0004144 - diacylglycerol O-acyltransferase activity [Evidence IEA]
GO:0045017 - glycerolipid biosynthetic process [Evidence IEA]
wax ester/triacylglycerol synthase family O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015308501.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003887018.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308498.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039580.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015308496.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003924895.1
COORDINATES: similar to AA sequence:RefSeq:WP_005632340.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:NP_217019.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011741492.1
COORDINATES: similar to AA sequence:RefSeq:WP_003890283.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308491.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308490.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016882337.1
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015308487.1
COORDINATES: similar to AA sequence:RefSeq:WP_005141122.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308485.1
COORDINATES: similar to AA sequence:RefSeq:WP_010224546.1
COORDINATES: similar to AA sequence:RefSeq:WP_010224547.1
COORDINATES: protein motif:HMM:NF018595.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308468.1
COORDINATES: similar to AA sequence:RefSeq:WP_011560572.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005141094.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331214.1
COORDINATES: similar to AA sequence:RefSeq:WP_005142087.1
COORDINATES: similar to AA sequence:RefSeq:WP_018600433.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_003876362.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000736.1
COORDINATES: protein motif:HMM:NF004837.0
COORDINATES: similar to AA sequence:RefSeq:WP_011599975.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016880396.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_003890312.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003890311.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003890310.1
GO:0019439 - aromatic compound catabolic process [Evidence IEA]; GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_003890309.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_020498673.1
COORDINATES: similar to AA sequence:RefSeq:WP_003890307.1
COORDINATES: similar to AA sequence:RefSeq:WP_005141183.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005141184.1
COORDINATES: similar to AA sequence:RefSeq:WP_005141202.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308483.1
COORDINATES: similar to AA sequence:RefSeq:WP_015355622.1
COORDINATES: similar to AA sequence:RefSeq:NP_216483.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020787344.1
COORDINATES: similar to AA sequence:RefSeq:NP_216485.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308478.1
COORDINATES: similar to AA sequence:RefSeq:WP_014212439.1
GO:0015914 - phospholipid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308790.1
COORDINATES: similar to AA sequence:RefSeq:WP_019511872.1
COORDINATES: similar to AA sequence:RefSeq:WP_011856509.1
COORDINATES: similar to AA sequence:RefSeq:WP_015355628.1
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308470.1
COORDINATES: similar to AA sequence:RefSeq:WP_005141091.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308466.1
COORDINATES: similar to AA sequence:RefSeq:WP_013828211.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006336917.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015308465.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308463.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308462.1
COORDINATES: similar to AA sequence:RefSeq:WP_013873382.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308458.1
COORDINATES: similar to AA sequence:RefSeq:WP_005141130.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015308456.1
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308455.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475548.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015308453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308452.1
COORDINATES: similar to AA sequence:RefSeq:WP_005175091.1
COORDINATES: similar to AA sequence:RefSeq:WP_011727444.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_015308449.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014587935.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005147722.1
COORDINATES: similar to AA sequence:RefSeq:NP_218158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014384205.1
COORDINATES: similar to AA sequence:RefSeq:WP_003921169.1
COORDINATES: similar to AA sequence:RefSeq:WP_005143596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014211194.1
COORDINATES: similar to AA sequence:RefSeq:NP_214704.1
COORDINATES: similar to AA sequence:RefSeq:WP_013124814.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
four-helix bundle copper-binding protein
COORDINATES: protein motif:HMM:NF013868.2
GO:0043856 - anti-sigma factor antagonist activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008258384.1
GO:0045152 - antisigma factor binding [Evidence IEA]
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005133116.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012870.2
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011892097.1
COORDINATES: similar to AA sequence:RefSeq:WP_007468060.1
COORDINATES: protein motif:HMM:NF033543.1
COORDINATES: similar to AA sequence:RefSeq:WP_007172483.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611765.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:YP_177709.1
COORDINATES: similar to AA sequence:RefSeq:WP_003892038.1
COORDINATES: similar to AA sequence:RefSeq:WP_011780852.1
COORDINATES: similar to AA sequence:RefSeq:WP_009774525.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011892761.1
COORDINATES: similar to AA sequence:RefSeq:WP_014816598.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008256165.1
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008256679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014941946.1
COORDINATES: similar to AA sequence:RefSeq:WP_003409199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011896245.1
COORDINATES: similar to AA sequence:RefSeq:WP_003876199.1
COORDINATES: similar to AA sequence:RefSeq:NP_217850.1
COORDINATES: protein motif:HMM:NF025197.2
COORDINATES: similar to AA sequence:RefSeq:WP_007170724.1
COORDINATES: similar to AA sequence:RefSeq:WP_020101619.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent cysteine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010950602.1
COORDINATES: similar to AA sequence:RefSeq:WP_015355470.1
COORDINATES: similar to AA sequence:RefSeq:WP_020726618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012392505.1
COORDINATES: similar to AA sequence:RefSeq:WP_011856736.1
COORDINATES: similar to AA sequence:RefSeq:WP_014352241.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020103138.1
COORDINATES: similar to AA sequence:RefSeq:WP_015303204.1
COORDINATES: protein motif:HMM:NF016101.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611735.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: similar to AA sequence:RefSeq:WP_011725164.1
COORDINATES: similar to AA sequence:RefSeq:NP_218155.1
COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558018.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_007514889.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003417.0
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012393281.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_005137217.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012891046.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009953045.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_019736930.1
COORDINATES: similar to AA sequence:RefSeq:WP_017680803.1
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008257443.1
COORDINATES: similar to AA sequence:RefSeq:WP_014348413.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007296065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014211196.1