Treponema parvum strain ATCC 700770 chromosome, complete genome.
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema.
Complete Genome Sequences of Three Human Oral Treponema parvum Isolates
Microbiol Resour Announc 10 (27), e0039421 (2021)
Submitted (30-MAY-2020) Faculty of Dentistry, The University of Hong Kong, Prince Philip Dental Hospital, 34 Hospital Road, Hong Kong 00852, Hong Kong
REFSEQ INFORMATION: The reference sequence is identical to\nCP054142.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from Dr. Rory Watt, Faculty of\nDentistry, The University of Hong Kong, 34 Hospital Road, Hong\nKong.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.12.0; Unicycler v. 0.4.5;\n tblastn v. 2.6.0+; bowtie v. 2.3.4.1;\n samtools v. 1.8; pilon v. 1.22; bcftools\n v. 1.8; java v. 1.8.0_74\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 921.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 02:44:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,339\nCDSs (total) :: 2,283\nGenes (coding) :: 2,275\nCDSs (with protein) :: 2,275\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 4 of 8\nPseudo Genes (incomplete) :: 6 of 8\nPseudo Genes (internal stop) :: 0 of 8\nPseudo Genes (multiple problems) :: 2 of 8\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_016521217.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_002666474.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700284.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_011772387.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521224.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002667653.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_009107590.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757189.1
GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013757191.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757483.1
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: similar to AA sequence:RefSeq:WP_010694554.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705708.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520627.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF014647.2
GO:0005886 - plasma membrane [Evidence IEA]
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:TIGR00259.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF015445.2
GO:0055085 - transmembrane transport [Evidence IEA]
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757265.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757423.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668086.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF028064.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701138.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701137.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270268.1
COORDINATES: similar to AA sequence:RefSeq:WP_010735800.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524441.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521752.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759607.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521754.1
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_016521755.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013700325.1
COORDINATES: protein motif:HMM:NF013446.2
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700324.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759255.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013606713.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606715.1
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_002702879.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_009102440.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524548.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700353.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521661.1
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF022666.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520840.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102540.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102543.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521802.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013944793.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705681.1
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF003995.0
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_016520775.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013969953.1
3-phosphoglycerate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520773.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_006189145.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102774.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520764.1
GO:0008832 - dGTPase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702184.1
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102373.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013605900.1
COORDINATES: similar to AA sequence:RefSeq:WP_002671951.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521027.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520654.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708642.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521137.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002701443.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757717.1
COORDINATES: similar to AA sequence:RefSeq:WP_010696556.1
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013757711.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_016520128.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269944.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520692.1
GO:0008150 - biological_process [Evidence IEA]
TIGR03905 family TSCPD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002706605.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518914.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676650.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002674090.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010694832.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759320.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520650.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520648.1
tRNA-uridine aminocarboxypropyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002702867.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002696723.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270002.1
COORDINATES: protein motif:HMM:NF024126.2
COORDINATES: protein motif:HMM:NF019113.2
COORDINATES: similar to AA sequence:RefSeq:WP_013605907.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: similar to AA sequence:RefSeq:WP_020614171.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521253.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521248.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759603.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759602.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523176.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102352.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_002701968.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526586.1
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_009106991.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703027.1
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF012242.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521810.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056026.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521841.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521839.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013757636.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523954.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524470.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105442.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700312.1
COORDINATES: protein motif:HMM:NF012772.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704877.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521424.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521423.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759304.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520897.1
WYL domain-containing transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016523234.1
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518822.1
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_002672912.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022427.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671326.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520600.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_016526239.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702065.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102468.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522078.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520892.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266619.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759229.1
GO:0016787 - hydrolase activity [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524410.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520602.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757750.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_002706766.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF015366.2
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014269610.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014271580.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014270159.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270158.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270157.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013740168.1
COORDINATES: similar to AA sequence:RefSeq:WP_013740169.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_013740167.1
COORDINATES: similar to AA sequence:RefSeq:WP_002680283.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607853.1
COORDINATES: similar to AA sequence:RefSeq:WP_013740174.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013740175.1
COORDINATES: protein motif:HMM:NF024850.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014073.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: similar to AA sequence:RefSeq:WP_014271316.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF025065.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: similar to AA sequence:RefSeq:WP_014271275.1
COORDINATES: similar to AA sequence:RefSeq:WP_016517801.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694945.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016524649.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523603.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006190401.1
ClbS/DfsB family four-helix bundle protein
COORDINATES: protein motif:HMM:NF016152.2
COORDINATES: similar to AA sequence:RefSeq:WP_006189079.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758362.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519519.1
COORDINATES: similar to AA sequence:RefSeq:WP_002675562.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188890.1
COORDINATES: protein motif:HMM:TIGR00629.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256042.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521865.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521864.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521863.1
NrtA/SsuA/CpmA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002665927.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002665928.1
COORDINATES: similar to AA sequence:RefSeq:WP_002691562.1
COORDINATES: similar to AA sequence:RefSeq:WP_002685306.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454862.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016526058.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_016526059.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002672689.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672691.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006190374.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002673005.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694712.1
COORDINATES: similar to AA sequence:RefSeq:WP_002686861.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188759.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013702521.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271149.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521929.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520355.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759016.1
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520611.1
COORDINATES: protein motif:HMM:NF025742.2
COORDINATES: similar to AA sequence:RefSeq:WP_010698345.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614076.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256711.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010694201.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013702325.1
COORDINATES: similar to AA sequence:RefSeq:WP_010695059.1
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104301.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757473.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693107.1
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187705.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103749.1
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702582.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702581.1
COORDINATES: protein motif:HMM:NF012793.2
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253542.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_010695132.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881686.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702576.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706030.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521738.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015709126.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_012538144.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670537.1
COORDINATES: similar to AA sequence:RefSeq:WP_002669993.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967860.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708628.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103801.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010881638.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526198.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259370.1
COORDINATES: similar to AA sequence:RefSeq:WP_010956815.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188376.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522591.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103815.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702559.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881646.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188381.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700872.1
COORDINATES: similar to AA sequence:RefSeq:WP_002557082.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188385.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010881652.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259337.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520671.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702549.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705981.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670039.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522583.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009103852.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702542.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521796.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521795.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702539.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259739.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103896.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712174.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103900.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016518272.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_002677971.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104292.1
COORDINATES: protein motif:HMM:NF016347.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759362.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002686749.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002669522.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002690512.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_009106665.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520737.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520738.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_010254341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759359.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970211.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106670.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_013759278.1
COORDINATES: similar to AA sequence:RefSeq:WP_012028272.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013740334.1
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: similar to AA sequence:RefSeq:WP_015710669.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268870.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002705431.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520633.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013606199.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606200.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606201.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520905.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702910.1
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520902.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704544.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701075.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520702.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_015710037.1
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002696054.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013757856.1
COORDINATES: similar to AA sequence:RefSeq:WP_002686934.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103031.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670104.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757617.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009104233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266530.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF020596.2
GO:0008233 - peptidase activity [Evidence IEA]
This family includes IgM or IgG-cleaving cysteine proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002702196.1
COORDINATES: protein motif:HMM:NF016827.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671537.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521166.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010696961.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103943.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009103944.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188461.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521084.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521083.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759241.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759239.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: protein motif:HMM:TIGR02757.1
GO:0005575 - cellular_component [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102922.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015710449.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270380.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967893.1
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269823.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: protein motif:HMM:NF009466.0
COORDINATES: similar to AA sequence:RefSeq:WP_016518584.1
DNA starvation/stationary phase protection protein
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: protein motif:HMM:NF024571.2
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014625711.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524964.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_016520612.1
COORDINATES: protein motif:HMM:NF017355.2
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_016518680.1
COORDINATES: similar to AA sequence:RefSeq:WP_010693782.1
COORDINATES: protein motif:HMM:NF013594.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_013606206.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606207.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706064.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524578.1
COORDINATES: protein motif:HMM:TIGR00040.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF015817.2
DbpA RNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_010263172.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013700454.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521284.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521285.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526218.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013700876.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702916.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702918.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520974.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520973.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525927.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673247.1
COORDINATES: protein motif:HMM:NF021390.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520576.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002670476.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521458.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944747.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: similar to AA sequence:RefSeq:WP_010695058.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707270.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013701068.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704314.1
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701045.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_002679905.1
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002681741.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002678739.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_013700755.1
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102900.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759072.1
COORDINATES: similar to AA sequence:RefSeq:WP_010696630.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522330.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759070.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759068.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_002701766.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_002667220.1
Holliday junction resolvase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521874.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524884.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757759.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106944.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521846.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521845.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757930.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694886.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105733.1
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521785.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704605.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_002704609.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704612.1
tRNA-dihydrouridine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520261.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF016894.2
GO:0008671 - 2-dehydro-3-deoxygalactonokinase activity [Evidence IEA]
GO:0034194 - D-galactonate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758192.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702286.1
COORDINATES: similar to AA sequence:RefSeq:WP_002684828.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009103237.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: protein motif:HMM:NF018537.2
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_013314956.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523416.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_013970140.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521925.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102890.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699700.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522780.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701624.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_013757684.1
COORDINATES: protein motif:HMM:NF015693.2
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002704403.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757682.1
COORDINATES: protein motif:HMM:NF026198.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526119.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702257.1
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757954.1
COORDINATES: protein motif:HMM:NF036553.2
COORDINATES: similar to AA sequence:RefSeq:WP_016522014.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_013758008.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_013700713.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105476.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522018.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_016522459.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758014.1
FlgD immunoglobulin-like domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002684789.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709805.1
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015712804.1
COORDINATES: protein motif:HMM:NF014126.2
COORDINATES: similar to AA sequence:RefSeq:WP_016522489.1
COORDINATES: similar to AA sequence:RefSeq:WP_002690279.1
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520845.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701912.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757985.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521555.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757271.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757270.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757269.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757268.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757267.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521554.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013758218.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013700672.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757742.1
glycogen-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013700675.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521818.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757721.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701075.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703674.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757833.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103087.1
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013740366.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521684.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521682.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009105760.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703394.1
GO:0003747 - translation release factor activity [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_013759643.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102801.1
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758413.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702958.1
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261813.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013757870.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103175.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103177.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700630.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520889.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520705.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520706.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700635.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758472.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706207.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519973.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701197.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261157.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105804.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758788.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF001954.0
COORDINATES: similar to AA sequence:RefSeq:WP_013757316.1
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524829.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524828.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524827.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524826.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520225.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520226.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525882.1
COORDINATES: protein motif:HMM:NF014624.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521055.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
lipopolysaccharide assembly protein LapA domain-containing protein
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_002705809.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519823.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693066.1
COORDINATES: similar to AA sequence:RefSeq:WP_002696601.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013759194.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002698590.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: similar to AA sequence:RefSeq:WP_009102574.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521798.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700870.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314847.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03143.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519873.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668591.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105891.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524867.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104604.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013970048.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712831.1
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520862.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526454.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009105075.1
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010694351.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694353.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255892.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_002696104.1
COORDINATES: similar to AA sequence:RefSeq:WP_002676824.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521302.1
COORDINATES: protein motif:HMM:NF040096.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524518.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703039.1
thiamine ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013968993.1
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_013758734.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882172.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701838.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016520503.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_016520502.1
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758236.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701766.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758443.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758445.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701361.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702253.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009102414.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519665.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703848.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521108.1
COORDINATES: protein motif:HMM:NF016875.2
COORDINATES: similar to AA sequence:RefSeq:WP_002702735.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759093.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525040.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519989.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018299.2
COORDINATES: similar to AA sequence:RefSeq:WP_002670516.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700154.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013702209.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702719.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520478.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520477.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520475.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525721.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002689588.1
COORDINATES: similar to AA sequence:RefSeq:WP_002685789.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_016524312.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758872.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107474.1
COORDINATES: protein motif:HMM:TIGR01579.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: protein motif:HMM:NF004325.0
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758956.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002667639.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520544.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF013799.2
ectonucleotide pyrophosphatase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_009107265.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701596.1
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520538.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520529.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: similar to AA sequence:RefSeq:WP_002676828.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107274.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107277.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712840.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701741.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520519.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524988.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_002704835.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758716.1
3-dehydroquinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758715.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519754.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519756.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_002704829.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519758.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106531.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106533.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009106535.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758395.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758397.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606606.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739726.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525047.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520047.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520048.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519982.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519983.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519984.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758098.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
flagellar filament outer layer protein FlaA
COORDINATES: similar to AA sequence:RefSeq:WP_010882109.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520276.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_016524259.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_013701779.1
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002706176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758105.1
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: similar to AA sequence:RefSeq:WP_013701776.1
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520270.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104438.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520268.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520267.1
COORDINATES: protein motif:HMM:NF014533.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520265.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525067.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010259197.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706187.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_009105696.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704806.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520257.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_018526066.1
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_016517856.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_016520255.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520254.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009105711.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758124.1
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521454.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521592.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758137.1
COORDINATES: protein motif:HMM:NF019318.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104550.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519733.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758143.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758144.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002683602.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_016519741.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702243.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704749.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525612.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758153.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013759026.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613406.1
COORDINATES: protein motif:HMM:NF024686.2
chitobiase/beta-hexosaminidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758740.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525126.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757197.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525923.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521519.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759180.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF013237.2
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_016521195.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519444.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521193.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_016521192.1
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524370.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524371.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521187.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524373.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521185.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF014248.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526302.1
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758659.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758046.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758047.1
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_013606204.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520760.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520758.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_009107939.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699619.1
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016519859.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_002679608.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_009107445.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: protein motif:HMM:NF013923.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701270.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013968902.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_002670683.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521480.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525154.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706357.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758971.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF013697.2
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701372.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002668301.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106426.1
COORDINATES: protein motif:HMM:TIGR04321.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520239.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706366.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520237.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106413.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525505.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701382.1
COORDINATES: protein motif:HMM:NF014652.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624069.1
COORDINATES: protein motif:HMM:NF005559.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015682.2
COORDINATES: protein motif:HMM:NF015727.2
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019011.2
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: similar to AA sequence:RefSeq:WP_009104655.1
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF014218.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015536.2
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: protein motif:HMM:NF025229.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255594.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521670.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699465.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758286.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758288.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525261.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520399.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016520397.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698988.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693113.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520394.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758314.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520392.1
COORDINATES: protein motif:HMM:NF001100.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525333.1
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521590.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523207.1
COORDINATES: similar to AA sequence:RefSeq:WP_010696927.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521809.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520187.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758474.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706455.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706456.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256750.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520076.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525355.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520068.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758492.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525367.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002705339.1
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_009107211.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518113.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758487.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002705346.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758485.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758484.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525361.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_016525360.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524522.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701182.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104620.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666027.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525736.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702017.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693055.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189663.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016519858.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_013758642.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522042.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701545.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758555.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106306.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_002705383.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705382.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523823.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758549.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106319.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520107.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016520106.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106331.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002689633.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_020612823.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014215.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_002693273.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_013701468.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013758436.1
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_013252843.1
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002694834.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701448.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520055.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024739.2
COORDINATES: similar to AA sequence:RefSeq:WP_010698558.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698557.1
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_002694964.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002683295.1
Vat family streptogramin A O-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002668012.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606039.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526387.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758817.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758816.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016521838.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758578.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524455.1
COORDINATES: protein motif:HMM:NF018305.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739487.1
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701420.1
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_002706627.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015100.2
COORDINATES: protein motif:HMM:NF024768.2
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758514.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525322.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525321.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520085.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608613.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525566.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: similar to AA sequence:RefSeq:WP_013256387.1
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: protein motif:HMM:NF006920.0
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002699235.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699220.1
COORDINATES: protein motif:HMM:NF016901.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518886.1
COORDINATES: similar to AA sequence:RefSeq:WP_002688978.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002676965.1
type II toxin-antitoxin system MqsA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002685381.1
COORDINATES: protein motif:HMM:NF017106.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701434.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002678440.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525425.1
COORDINATES: similar to AA sequence:RefSeq:WP_009107029.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520031.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758519.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_016520027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758522.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_009107003.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009107002.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016520391.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520861.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757448.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701573.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702478.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF025622.2
glucosyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757469.1
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002671371.1
GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525307.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002695535.1
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002705536.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701613.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758328.1
undecaprenyl-phosphate galactose phosphotransferase WbaP
COORDINATES: similar to AA sequence:RefSeq:WP_013701617.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012460548.1
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016520297.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520298.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106118.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758320.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701622.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518441.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520303.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758281.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254177.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701716.1
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: similar to AA sequence:RefSeq:WP_009106096.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520312.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_002706407.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002666830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701722.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.; The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_009106087.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706401.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758729.1
COORDINATES: similar to AA sequence:RefSeq:WP_010882169.1
COORDINATES: similar to AA sequence:RefSeq:WP_002691782.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016520322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106077.1
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697665.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189014.1
COORDINATES: protein motif:HMM:NF016839.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520153.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758656.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525688.1
COORDINATES: similar to AA sequence:RefSeq:WP_002691446.1
COORDINATES: similar to AA sequence:RefSeq:WP_016512101.1
COORDINATES: protein motif:HMM:NF026101.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519418.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706287.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758126.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701763.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188729.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706278.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758303.1
COORDINATES: protein motif:HMM:TIGR00556.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701353.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520425.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701351.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00174.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520428.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_016521951.1
COORDINATES: protein motif:HMM:NF014607.2
COORDINATES: similar to AA sequence:RefSeq:WP_002706267.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701286.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_016520161.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520163.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520164.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701278.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706253.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520180.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106500.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105251.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520190.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_009103517.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758332.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758331.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758330.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_009106489.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520196.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706242.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520872.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520870.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520869.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524116.1
non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016522378.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706238.1
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: similar to AA sequence:RefSeq:WP_009106471.1
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701582.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_016520211.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_006188992.1
GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002688405.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188990.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758980.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758704.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525791.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613082.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: protein motif:HMM:NF016216.2
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_002698698.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521777.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521778.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521779.1
COORDINATES: protein motif:HMM:NF002963.0
COORDINATES: similar to AA sequence:RefSeq:WP_014271181.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005305.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002702711.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0019358 - nicotinate nucleotide salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525357.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105783.1
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_013701752.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188182.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254267.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187945.1
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:NF021558.2
COORDINATES: protein motif:HMM:NF015284.2
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002699123.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_016290016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700641.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013970053.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700643.1
GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
bifunctional aspartate kinase/homoserine dehydrogenase I
COORDINATES: similar to AA sequence:RefSeq:WP_013256685.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525723.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758861.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104812.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006188803.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013252840.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270183.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013252837.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611178.1
autoinducer 2 ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014270187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270188.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520748.1
COORDINATES: similar to AA sequence:RefSeq:WP_001114254.1
COORDINATES: similar to AA sequence:RefSeq:WP_007392010.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016520286.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016278.2
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0070475 - rRNA base methylation [Evidence IEA]
23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR00619.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525117.1
FliG C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525123.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519887.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004266580.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
sodium-extruding oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013758815.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758402.1
ribonuclease catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF028441.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521107.1
COORDINATES: protein motif:HMM:NF015722.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739048.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_016519525.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521098.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526075.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521097.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526073.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521095.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521094.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002692749.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524464.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524468.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524467.1
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012904.2
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013606895.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704414.1
COORDINATES: protein motif:HMM:NF016000.2
COORDINATES: protein motif:HMM:NF016115.2
GO:0004061 - arylformamidase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002691141.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670732.1
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_002677663.1
COORDINATES: similar to AA sequence:RefSeq:WP_002671707.1
COORDINATES: protein motif:HMM:NF013087.2
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525075.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189665.1
Sir2 silent information regulator family NAD-dependent deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_013702341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759629.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520442.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520445.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520446.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520447.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188220.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006188219.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: protein motif:HMM:NF037268.2
HNH endonuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015707698.1
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519903.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002668887.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012846.2
COORDINATES: similar to AA sequence:RefSeq:WP_002701893.1
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519864.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525656.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009105640.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521727.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521728.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701876.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:NF013621.2
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002701872.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758818.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01813.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009105625.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_013758906.1
COORDINATES: similar to AA sequence:RefSeq:WP_010254519.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702753.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519893.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104766.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104764.1
COORDINATES: similar to AA sequence:RefSeq:WP_010255737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711898.1
COORDINATES: protein motif:HMM:NF014577.2
outer membrane protein transport protein
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: similar to AA sequence:RefSeq:WP_010698958.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF009750.0
GO:0047559 - 3-dehydro-L-gulonate 2-dehydrogenase activity [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102947.1
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521596.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521597.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521598.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521599.1
COORDINATES: similar to AA sequence:RefSeq:WP_015713053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102819.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_016521603.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010692353.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702151.1
COORDINATES: similar to AA sequence:RefSeq:WP_002689672.1
COORDINATES: similar to AA sequence:RefSeq:WP_002677744.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016518970.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518969.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697898.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521426.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520794.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520795.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189441.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009107657.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520412.1
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105671.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02612.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702114.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757914.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009102654.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525015.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525014.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522923.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261033.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522921.1
COORDINATES: protein motif:HMM:NF017786.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520368.1
COORDINATES: protein motif:HMM:NF014676.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520370.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104699.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016519942.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519941.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519940.1
TRAP transporter TatT component family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002690972.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455855.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607794.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701249.1
COORDINATES: similar to AA sequence:RefSeq:WP_002692451.1
tRNA 2-thiocytidine biosynthesis TtcA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013968438.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525707.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518071.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521068.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697288.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521070.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_002704875.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700652.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758072.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703138.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525878.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704033.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015710651.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704883.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006102 - isocitrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010260948.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701496.1
COORDINATES: protein motif:HMM:NF025625.2
COORDINATES: similar to AA sequence:RefSeq:WP_002666760.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706348.1
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009104348.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758310.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520429.1
COORDINATES: similar to AA sequence:RefSeq:WP_010692948.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706320.1
late competence development ComFB family protein
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520597.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520092.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525217.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520548.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521128.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521126.1
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016522071.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005362589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698344.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524638.1
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521520.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013758952.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_016518380.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524153.1
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002666791.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701050.1
bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
COORDINATES: similar to AA sequence:RefSeq:WP_016520212.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758837.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624811.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758819.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700655.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758822.1
COORDINATES: similar to AA sequence:RefSeq:WP_013740369.1
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: similar to AA sequence:RefSeq:WP_015713116.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013758823.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009103993.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758825.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758827.1
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701803.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758829.1
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701807.1
COORDINATES: similar to AA sequence:RefSeq:WP_002668509.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103979.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002703994.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269580.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_013605888.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269583.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269584.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606718.1
COORDINATES: protein motif:HMM:NF013356.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757780.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758849.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519944.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016519943.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519780.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_013945300.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010882388.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525602.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968821.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526308.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525402.1
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291413.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002684228.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519371.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698050.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702466.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757537.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106290.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009106288.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757973.1
COORDINATES: protein motif:HMM:NF026247.2
COORDINATES: protein motif:HMM:NF025665.2
glycoside hydrolase family 99-like domain-containing protein
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_010699315.1
lipopolysaccharide biosynthesis protein RfbH
COORDINATES: similar to AA sequence:RefSeq:WP_013757964.1
GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712498.1
GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013701765.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700650.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF012879.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521539.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009105809.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:TIGR01910.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002685837.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672007.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525371.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758240.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701924.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009104249.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013757815.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757813.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_016521036.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525601.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673965.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702393.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758586.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103862.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520813.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525099.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520815.1
GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006189342.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520817.1
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520841.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703596.1
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009103883.1
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518591.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103889.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519924.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519923.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704471.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519922.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704473.1
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519919.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103009.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_002698585.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698581.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521644.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521645.1
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_002701718.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666388.1
COORDINATES: similar to AA sequence:RefSeq:WP_010692225.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699252.1
GO:0035460 - L-ascorbate 6-phosphate lactonase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019854 - L-ascorbic acid catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025035.2
adenine-specific methyltransferase EcoRI family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002666783.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757507.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968014.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270791.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757503.1
COORDINATES: similar to AA sequence:RefSeq:WP_002673228.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700442.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_013740146.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010699706.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521000.1
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521312.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521529.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105802.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700620.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521720.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039905.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104128.1
COORDINATES: protein motif:HMM:NF013868.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016521774.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010694675.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700752.1
COORDINATES: similar to AA sequence:RefSeq:WP_002703608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700754.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969397.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524693.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521573.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523038.1
COORDINATES: protein motif:HMM:NF016159.2
COORDINATES: similar to AA sequence:RefSeq:WP_002682206.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
TdeIII family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_002682204.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523039.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672335.1
COORDINATES: similar to AA sequence:RefSeq:WP_002672336.1
COORDINATES: similar to AA sequence:RefSeq:WP_002685731.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698871.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518570.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697473.1
COORDINATES: similar to AA sequence:RefSeq:WP_010697472.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520606.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007884694.1
radical SAM mobile pair system MarR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016526298.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_015712239.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016526234.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
tetrahydrofolate dehydrogenase/cyclohydrolase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016519827.1
COORDINATES: protein motif:HMM:TIGR04382.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013916.2
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009106254.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_009106256.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_009107222.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270454.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103169.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002705470.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013702258.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700463.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711390.1
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687459.1
COORDINATES: similar to AA sequence:RefSeq:WP_016512179.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106886.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_002704934.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521393.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524615.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701478.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF014686.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759477.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524845.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524844.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523878.1
manganese/iron ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524842.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524841.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
manganese-binding transcriptional regulator MntR
COORDINATES: similar to AA sequence:RefSeq:WP_016519930.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027249.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524800.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520214.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016522767.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700490.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757908.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_016519773.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_016519771.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704027.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009107241.1
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016521552.1
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013700736.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016524872.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520574.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521871.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519803.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103165.1
COORDINATES: similar to AA sequence:RefSeq:WP_002671306.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524936.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520339.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_015708879.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701117.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701922.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608615.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270651.1
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_002685754.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521548.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702024.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712107.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270598.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521870.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]; GO:0035999 - tetrahydrofolate interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758950.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520963.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102498.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700728.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520699.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968389.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522397.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712125.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_013700721.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614236.1
COORDINATES: protein motif:HMM:NF033751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624116.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524868.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525549.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002705652.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520900.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016289952.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009107110.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010699196.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016520891.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520887.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680610.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269245.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_002679655.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701602.1
COORDINATES: similar to AA sequence:RefSeq:WP_002701601.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521758.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702529.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010881546.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944804.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105438.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759213.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759217.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969556.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702074.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260879.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614189.1
COORDINATES: similar to AA sequence:RefSeq:WP_014623806.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104120.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759486.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520879.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_013759490.1
COORDINATES: similar to AA sequence:RefSeq:WP_009104115.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521982.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013757350.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: similar to AA sequence:RefSeq:WP_014271652.1
COORDINATES: similar to AA sequence:RefSeq:WP_009102921.1
COORDINATES: protein motif:HMM:NF040322.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522828.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702645.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521660.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759263.1
COORDINATES: protein motif:HMM:NF016116.2
lipoprotein 17-related variable surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_002682521.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270702.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702615.1
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_016520657.1
COORDINATES: similar to AA sequence:RefSeq:WP_010957004.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759529.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013702510.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520908.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105578.1
COORDINATES: similar to AA sequence:RefSeq:WP_010698747.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_013700293.1
COORDINATES: protein motif:HMM:NF013885.2
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014270608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013738686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271761.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271759.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606041.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610970.1
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015711141.1
COORDINATES: protein motif:HMM:NF003154.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002699230.1
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF013030.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520912.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523351.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523350.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759473.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105515.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_016522613.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702602.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290314.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709431.1
COORDINATES: similar to AA sequence:RefSeq:WP_015709822.1
COORDINATES: protein motif:HMM:NF021387.2
COORDINATES: protein motif:HMM:NF014445.2
COORDINATES: similar to AA sequence:RefSeq:WP_016520357.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520358.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016520359.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002681770.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521359.1
COORDINATES: similar to AA sequence:RefSeq:WP_002689695.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009104104.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521367.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016526374.1
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759655.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608654.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757202.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606036.1
COORDINATES: protein motif:HMM:NF013276.2
GO:0030599 - pectinesterase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002702923.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257323.1
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521377.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521380.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021534.2
COORDINATES: protein motif:HMM:NF014850.2
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010254771.1
COORDINATES: similar to AA sequence:RefSeq:WP_024752187.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759522.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700336.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_016521449.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759654.1
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: protein motif:HMM:TIGR03942.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0018209 - peptidyl-serine modification [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757362.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700334.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_015709920.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521442.1
COORDINATES: similar to AA sequence:RefSeq:WP_002674194.1
CD1871A family CXXC motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009102787.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758383.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759435.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524430.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002670474.1
COORDINATES: protein motif:HMM:NF017459.2
COORDINATES: protein motif:HMM:NF027394.2
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: similar to AA sequence:RefSeq:WP_020610742.1
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002702620.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016520824.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524564.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759451.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521960.1
COORDINATES: protein motif:HMM:NF015822.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105996.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_013759425.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701460.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526326.1
COORDINATES: similar to AA sequence:RefSeq:WP_013701462.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521104.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_013970180.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523119.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016526546.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518871.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518872.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614003.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518904.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518905.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518906.1
COORDINATES: protein motif:HMM:NF024050.2
COORDINATES: similar to AA sequence:RefSeq:WP_002683314.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002706612.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002669676.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:TIGR00009.1
COORDINATES: similar to AA sequence:RefSeq:WP_010699710.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702278.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014801.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271151.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521532.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521533.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521535.1
COORDINATES: similar to AA sequence:RefSeq:WP_010254063.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521536.1
COORDINATES: similar to AA sequence:RefSeq:WP_013605878.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521538.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0046487 - glyoxylate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524891.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702648.1
COORDINATES: similar to AA sequence:RefSeq:WP_009105116.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_006187725.1
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: similar to AA sequence:RefSeq:WP_016526026.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016522950.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698252.1
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF023880.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525634.1
COORDINATES: similar to AA sequence:RefSeq:WP_016520378.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_010694151.1
COORDINATES: similar to AA sequence:RefSeq:WP_002689706.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187573.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670100.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694828.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693022.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521274.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521587.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521588.1
COORDINATES: similar to AA sequence:RefSeq:WP_016519918.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670205.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759436.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700887.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002704621.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002700017.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520851.1
isoamylase early set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016520852.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759626.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708733.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004695181.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269247.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705127.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525442.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522030.1
COORDINATES: similar to AA sequence:RefSeq:WP_013758628.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521461.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522837.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687036.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700948.1
COORDINATES: similar to AA sequence:RefSeq:WP_016522212.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523124.1
COORDINATES: similar to AA sequence:RefSeq:WP_002669192.1
COORDINATES: similar to AA sequence:RefSeq:WP_002682973.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704694.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016522048.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF020804.2
small ribosomal subunit Rsm22 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524379.1
COORDINATES: similar to AA sequence:RefSeq:WP_002666777.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009103914.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518781.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016526540.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010696553.1
COORDINATES: similar to AA sequence:RefSeq:WP_002675692.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013759665.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025324.2
type III toxin-antitoxin system ToxN/AbiQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013702670.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702445.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_013945561.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B