Hypomesus transpacificus isolate Combined female chromosome 1, fHypTra1, whole genome shotgun sequence.
type: Entry
definition: Hypomesus transpacificus isolate Combined female chromosome 1, fHypTra1, whole genome shotgun sequence.
sequence version: NC_061060.1
sequence date: 2022-03-05
sequence: sequence
division: CON
label: NC_061060.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA810474
dblink: SAMN24964577
keyword: WGS
keyword: RefSeq
source: Hypomesus transpacificus
organism: Hypomesus transpacificus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Stomiati; Osmeriformes; Osmeridae; Hypomesus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038972.1.\nAssembly name: fHypTra1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genomic Variation Lab at\nUniversity of California Davis on 2022/02/04. The original\nwhole-genome shotgun project has the accession JAJTOO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genomic Variation Lab at University of\n California Davis\nAssembly Date :: 21-APR-2021\nAssembly Method :: IPA v. 1.3.1; scaff10x v. 4.2; SALSA2 v.\n NA; Chromonomer v. 1.13\nAssembly Name :: fHypTra1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 120.0x\nSequencing Technology :: 10X; PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Hypomesus transpacificus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12516727
topology: linear
so has quality: SO_0000987
location: 1..12516727
location: region:1-12516727:1
RO_0002162: 137520

NC_061060
type: RefSeq
SIO_000068: refseq

PRJNA810474
type: BioProject
SIO_000068: bioproject

SAMN24964577
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12516727:1
position: 12516727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12516727:1:source
so part of: sequence
organism: Hypomesus transpacificus
mol type: genomic DNA
isolate: Combined female
isolation source: estuarine water [ENVO:01000301]
chromosome: 1
sex: female
country: USA: Fish Conservation and Culture Laboratory, Discovery Bay, California
lat lon: 37.824580 N 121.595404 W
collection date: 2019-10-10

137520
type: Taxonomy
SIO_000068: taxonomy

kif3a
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: kif3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22973..38406)
location: region:22973-38406:-1
so has part: feature:22973-38406:-1:exon
subclass of: SO_0000010

124476113
type: Gene
SIO_000068: ncbigene

position:22973:-1
position: 22973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38406:-1
position: 38406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22973-38406:-1:exon

kif3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: kif3a
product: kinesin family member 3A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047033155.1
SIO_010081: kif3a
subclass of: SO_0000673
so part of: kif3a
location: complement(join(22973..23734,24307..24437,24533..24601,25028..25081,25382..25507,26896..27006,28253..28433,28765..28921,32615..32713,33107..33281,34068..34265,34509..34648,34742..34847,36937..37021,37192..37336,37578..37860,38249..38406))
location: region:22973-38406:-1
so has part: feature:38249-38406:-1:exon
so has part: feature:37578-37860:-1:exon
so has part: feature:37192-37336:-1:exon
so has part: feature:36937-37021:-1:exon
so has part: feature:34742-34847:-1:exon
so has part: feature:34509-34648:-1:exon
so has part: feature:34068-34265:-1:exon
so has part: feature:33107-33281:-1:exon
so has part: feature:32615-32713:-1:exon
so has part: feature:28765-28921:-1:exon
so has part: feature:28253-28433:-1:exon
so has part: feature:26896-27006:-1:exon
so has part: feature:25382-25507:-1:exon
so has part: feature:25028-25081:-1:exon
so has part: feature:24533-24601:-1:exon
so has part: feature:24307-24437:-1:exon
so has part: feature:22973-23734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38249-38406:-1:exon

position:38249:-1
position: 38249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37578-37860:-1:exon

position:37578:-1
position: 37578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37860:-1
position: 37860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37192-37336:-1:exon

position:37192:-1
position: 37192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37336:-1
position: 37336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36937-37021:-1:exon

position:36937:-1
position: 36937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37021:-1
position: 37021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34742-34847:-1:exon

position:34742:-1
position: 34742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34847:-1
position: 34847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34509-34648:-1:exon

position:34509:-1
position: 34509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34648:-1
position: 34648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34068-34265:-1:exon

position:34068:-1
position: 34068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34265:-1
position: 34265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33107-33281:-1:exon

position:33107:-1
position: 33107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33281:-1
position: 33281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32615-32713:-1:exon

position:32615:-1
position: 32615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32713:-1
position: 32713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:28765-28921:-1:exon

position:28765:-1
position: 28765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28921:-1
position: 28921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:28253-28433:-1:exon

position:28253:-1
position: 28253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28433:-1
position: 28433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:26896-27006:-1:exon

position:26896:-1
position: 26896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27006:-1
position: 27006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:25382-25507:-1:exon

position:25382:-1
position: 25382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25507:-1
position: 25507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:25028-25081:-1:exon

position:25028:-1
position: 25028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25081:-1
position: 25081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:24533-24601:-1:exon

position:24533:-1
position: 24533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24601:-1
position: 24601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:24307-24437:-1:exon

position:24307:-1
position: 24307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24437:-1
position: 24437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:22973-23734:-1:exon

position:23734:-1
position: 23734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kif3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: kif3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF3A
translation: MPSNKIDKPEKPEISDNVKVVVRCRPLNQKEKMMANKQAVSVDEIRGTITVNKLETLHEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHVFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQMQRLEVKERPDVGVYIKDLSGYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGMDGNQHVRMGKLHLVDLAGSERQGKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSEGSGSEEMDEGEDEGGEVGEERRKRRGKKKVSPDKMVEMQAKIEEERRVLEAKLDMEEEERNKARAELEKREKDLLKAQQEHQLLLEKLLALEKKVIVGGVDLLAKAEEQEKLLQESNNELEERRRRAEQLRRELEEKEQERVDMEEKYSSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHHREIEGLLENIRQLSRELRLQMLIIDNFIPQEYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPLPDKKEKDPLEVDLSHVYLAYTEESMRQSLMRLERPRTSRSAKSGRPKTGRRKRSAKPEAVIESLLQ
SIO_010081: kif3a
subclass of: SO_0000673
so part of: kif3a
location: complement(join(23686..23734,24307..24437,24533..24601,25028..25081,25382..25507,26896..27006,28253..28433,28765..28921,32615..32713,33107..33281,34068..34265,34509..34648,34742..34847,36937..37021,37192..37336,37578..37860,38249..38254))
location: region:23686-38254:-1
so has part: feature:38249-38254:-1:exon
so has part: feature:37578-37860:-1:exon
so has part: feature:37192-37336:-1:exon
so has part: feature:36937-37021:-1:exon
so has part: feature:34742-34847:-1:exon
so has part: feature:34509-34648:-1:exon
so has part: feature:34068-34265:-1:exon
so has part: feature:33107-33281:-1:exon
so has part: feature:32615-32713:-1:exon
so has part: feature:28765-28921:-1:exon
so has part: feature:28253-28433:-1:exon
so has part: feature:26896-27006:-1:exon
so has part: feature:25382-25507:-1:exon
so has part: feature:25028-25081:-1:exon
so has part: feature:24533-24601:-1:exon
so has part: feature:24307-24437:-1:exon
so has part: feature:23686-23734:-1:exon

XP_046889111.1
type: Protein
SIO_000068: ncbiprotein

position:23686:-1
position: 23686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38254:-1
position: 38254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38249-38254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37578-37860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37192-37336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36937-37021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34742-34847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34509-34648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34068-34265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33107-33281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32615-32713:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28765-28921:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28253-28433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:26896-27006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:25382-25507:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25028-25081:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24533-24601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:24307-24437:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23686-23734:-1:exon

sh3rf2
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38798..54010)
location: region:38798-54010:-1
so has part: feature:38798-54010:-1:exon
subclass of: SO_0000010

124475902
type: Gene
SIO_000068: ncbigene

position:38798:-1
position: 38798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54010:-1
position: 54010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38798-54010:-1:exon

sh3rf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: sh3rf2
product: SH3 domain containing ring finger 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_047032891.1
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(38798..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51270,53981..54010))
location: region:38798-54010:-1
so has part: feature:53981-54010:-1:exon
so has part: feature:51093-51270:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:38798-39481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53981-54010:-1:exon

position:53981:-1
position: 53981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51093-51270:-1:exon

position:51093:-1
position: 51093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51270:-1
position: 51270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49199-49552:-1:exon

position:49199:-1
position: 49199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49552:-1
position: 49552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47948-48043:-1:exon

position:47948:-1
position: 47948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48043:-1
position: 48043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46464-46847:-1:exon

position:46464:-1
position: 46464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46847:-1
position: 46847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43873-44000:-1:exon

position:43873:-1
position: 43873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44000:-1
position: 44000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43465-43635:-1:exon

position:43465:-1
position: 43465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43635:-1
position: 43635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42974-43245:-1:exon

position:42974:-1
position: 42974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43245:-1
position: 43245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:41546-41799:-1:exon

position:41546:-1
position: 41546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41799:-1
position: 41799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:40901-41151:-1:exon

position:40901:-1
position: 40901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41151:-1
position: 41151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:38798-39481:-1:exon

position:39481:-1
position: 39481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sh3rf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: sh3rf2
product: SH3 domain containing ring finger 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_047033046.1
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(38798..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,49199..49552,51093..51270,53896..54001))
location: region:38798-54001:-1
so has part: feature:53896-54001:-1:exon
so has part: feature:51093-51270:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:38798-39481:-1:exon

position:54001:-1
position: 54001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53896-54001:-1:exon

position:53896:-1
position: 53896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51093-51270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38798-39481:-1:exon

sh3rf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: sh3rf2
product: SH3 domain containing ring finger 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_047032806.1
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(38798..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51270,53896..54001))
location: region:38798-54001:-1
so has part: feature:53896-54001:-1:exon
so has part: feature:51093-51270:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:38798-39481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53896-54001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51093-51270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47948-48043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:38798-39481:-1:exon

sh3rf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: sh3rf2
product: SH3 domain containing ring finger 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_047032962.1
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(38798..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51270,52192..52220))
location: region:38798-52220:-1
so has part: feature:52192-52220:-1:exon
so has part: feature:51093-51270:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:38798-39481:-1:exon

position:52220:-1
position: 52220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52192-52220:-1:exon

position:52192:-1
position: 52192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51093-51270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47948-48043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:38798-39481:-1:exon

sh3rf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF1 isoform X2
translation: MRLHQSRQPSSKMEELAFRGQDGRTKEVSQDTEPSLGQEGRPTQHRERQGGKGVSREALSFSGEPEGAPGDIIILGQKVEEDMHYGDIIMINLSSSELAPSNTVSSLQVLKQQHQHQPQRQHHHQQQYHHHQQQLELQPQPQMALCKARYNFDPKQLGLEDCKDCLTFLKPNSAAAKLLEGRNKVSDSSDYPPQLGSGNGTKLDRNTADVSNWIAVVGAPQGPAKIPNIHDLPAQAPQAAPPHYISLKRPPRGRPPGLPRPLQPRDPPHNLTSTVQHSGTFLRRVKHCSQHTHRHLSHGERRMNETPPTITMALINPQTSSSSSSADTKLPSSTQQLSISVCAALYSYKPRRPEELELRRGEMVGVYGSFKEGWLRGLSLRTGKVGILPGNYVTPVLRTSARLLESKVASVASGTVPGKRTSGSKGPAVVVALNRVDSEGTSFSAGQATSGSGGRPPMLSSTGAGRMSLNGGSQGWDKVRRAFHSSHRGSAQRGSHYTSSSWGLQAHGYSPTLPRKNHSLLPQPAWMLGRTSDSIAPSAASVVKDRELVGRKASSVPQSILVRPEAGRNHTDKATKSVRFVTQDEPGSVAGEESWKGEVWAPSLTLGRDGPGIFLRDGRVLRTASTDSLTSTQKPSSYAPSSTSQSAASSTQASPCRHRLTSSYRAQTDSELSLTKGELVLVHPHRPDGRVLVTQESSAQTGLFHSSVLHFLERLS
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(39301..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,49199..49552,51093..51248))
location: region:39301-51248:-1
so has part: feature:51093-51248:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:39301-39481:-1:exon

XP_046889002.1
type: Protein
SIO_000068: ncbiprotein

position:39301:-1
position: 39301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51248:-1
position: 51248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51093-51248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39301-39481:-1:exon

sh3rf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X1
translation: MRLHQSRQPSSKMEELAFRGQDGRTKEVSQDTEPSLGQEGRPTQHRERQGGKGVSREALSFSGEPEGAPGDIIILGQKVEEDMHYGDIIMINLSSSELAPSNTVSSLQVLKQQHQHQPQRQHHHQQQYHHHQQQLELQPQPQMALCKARYNFDPKQLGLEDCKDCLTFLKGDLFTVIRRVDDDWIEGKLGDKVGIFPLQFTEPNSAAAKLLEGRNKVSDSSDYPPQLGSGNGTKLDRNTADVSNWIAVVGAPQGPAKIPNIHDLPAQAPQAAPPHYISLKRPPRGRPPGLPRPLQPRDPPHNLTSTVQHSGTFLRRVKHCSQHTHRHLSHGERRMNETPPTITMALINPQTSSSSSSADTKLPSSTQQLSISVCAALYSYKPRRPEELELRRGEMVGVYGSFKEGWLRGLSLRTGKVGILPGNYVTPVLRTSARLLESKVASVASGTVPGKRTSGSKGPAVVVALNRVDSEGTSFSAGQATSGSGGRPPMLSSTGAGRMSLNGGSQGWDKVRRAFHSSHRGSAQRGSHYTSSSWGLQAHGYSPTLPRKNHSLLPQPAWMLGRTSDSIAPSAASVVKDRELVGRKASSVPQSILVRPEAGRNHTDKATKSVRFVTQDEPGSVAGEESWKGEVWAPSLTLGRDGPGIFLRDGRVLRTASTDSLTSTQKPSSYAPSSTSQSAASSTQASPCRHRLTSSYRAQTDSELSLTKGELVLVHPHRPDGRVLVTQESSAQTGLFHSSVLHFLERLS
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(39301..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51248))
location: region:39301-51248:-1
so has part: feature:51093-51248:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:39301-39481:-1:exon

XP_046888762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51093-51248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47948-48043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39301-39481:-1:exon

sh3rf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X1
translation: MRLHQSRQPSSKMEELAFRGQDGRTKEVSQDTEPSLGQEGRPTQHRERQGGKGVSREALSFSGEPEGAPGDIIILGQKVEEDMHYGDIIMINLSSSELAPSNTVSSLQVLKQQHQHQPQRQHHHQQQYHHHQQQLELQPQPQMALCKARYNFDPKQLGLEDCKDCLTFLKGDLFTVIRRVDDDWIEGKLGDKVGIFPLQFTEPNSAAAKLLEGRNKVSDSSDYPPQLGSGNGTKLDRNTADVSNWIAVVGAPQGPAKIPNIHDLPAQAPQAAPPHYISLKRPPRGRPPGLPRPLQPRDPPHNLTSTVQHSGTFLRRVKHCSQHTHRHLSHGERRMNETPPTITMALINPQTSSSSSSADTKLPSSTQQLSISVCAALYSYKPRRPEELELRRGEMVGVYGSFKEGWLRGLSLRTGKVGILPGNYVTPVLRTSARLLESKVASVASGTVPGKRTSGSKGPAVVVALNRVDSEGTSFSAGQATSGSGGRPPMLSSTGAGRMSLNGGSQGWDKVRRAFHSSHRGSAQRGSHYTSSSWGLQAHGYSPTLPRKNHSLLPQPAWMLGRTSDSIAPSAASVVKDRELVGRKASSVPQSILVRPEAGRNHTDKATKSVRFVTQDEPGSVAGEESWKGEVWAPSLTLGRDGPGIFLRDGRVLRTASTDSLTSTQKPSSYAPSSTSQSAASSTQASPCRHRLTSSYRAQTDSELSLTKGELVLVHPHRPDGRVLVTQESSAQTGLFHSSVLHFLERLS
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(39301..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51248))
location: region:39301-51248:-1
so has part: feature:51093-51248:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:39301-39481:-1:exon

XP_046888847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51093-51248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47948-48043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39301-39481:-1:exon

sh3rf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: sh3rf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X1
translation: MRLHQSRQPSSKMEELAFRGQDGRTKEVSQDTEPSLGQEGRPTQHRERQGGKGVSREALSFSGEPEGAPGDIIILGQKVEEDMHYGDIIMINLSSSELAPSNTVSSLQVLKQQHQHQPQRQHHHQQQYHHHQQQLELQPQPQMALCKARYNFDPKQLGLEDCKDCLTFLKGDLFTVIRRVDDDWIEGKLGDKVGIFPLQFTEPNSAAAKLLEGRNKVSDSSDYPPQLGSGNGTKLDRNTADVSNWIAVVGAPQGPAKIPNIHDLPAQAPQAAPPHYISLKRPPRGRPPGLPRPLQPRDPPHNLTSTVQHSGTFLRRVKHCSQHTHRHLSHGERRMNETPPTITMALINPQTSSSSSSADTKLPSSTQQLSISVCAALYSYKPRRPEELELRRGEMVGVYGSFKEGWLRGLSLRTGKVGILPGNYVTPVLRTSARLLESKVASVASGTVPGKRTSGSKGPAVVVALNRVDSEGTSFSAGQATSGSGGRPPMLSSTGAGRMSLNGGSQGWDKVRRAFHSSHRGSAQRGSHYTSSSWGLQAHGYSPTLPRKNHSLLPQPAWMLGRTSDSIAPSAASVVKDRELVGRKASSVPQSILVRPEAGRNHTDKATKSVRFVTQDEPGSVAGEESWKGEVWAPSLTLGRDGPGIFLRDGRVLRTASTDSLTSTQKPSSYAPSSTSQSAASSTQASPCRHRLTSSYRAQTDSELSLTKGELVLVHPHRPDGRVLVTQESSAQTGLFHSSVLHFLERLS
SIO_010081: sh3rf2
subclass of: SO_0000673
so part of: sh3rf2
location: complement(join(39301..39481,40901..41151,41546..41799,42974..43245,43465..43635,43873..44000,46464..46847,47948..48043,49199..49552,51093..51248))
location: region:39301-51248:-1
so has part: feature:51093-51248:-1:exon
so has part: feature:49199-49552:-1:exon
so has part: feature:47948-48043:-1:exon
so has part: feature:46464-46847:-1:exon
so has part: feature:43873-44000:-1:exon
so has part: feature:43465-43635:-1:exon
so has part: feature:42974-43245:-1:exon
so has part: feature:41546-41799:-1:exon
so has part: feature:40901-41151:-1:exon
so has part: feature:39301-39481:-1:exon

XP_046888918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51093-51248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49199-49552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47948-48043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46464-46847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43873-44000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43465-43635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42974-43245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41546-41799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40901-41151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39301-39481:-1:exon

LOC124482152
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124482152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65203..73860)
location: region:65203-73860:-1
so has part: feature:65203-73860:-1:exon
subclass of: SO_0000010

124482152
type: Gene
SIO_000068: ncbigene

position:65203:-1
position: 65203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73860:-1
position: 73860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65203-73860:-1:exon

LOC124482152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124482152
product: BTB/POZ domain-containing protein KCTD16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047042583.1
SIO_010081: LOC124482152
subclass of: SO_0000673
so part of: LOC124482152
location: complement(join(65203..66176,73062..73860))
location: region:65203-73860:-1
so has part: feature:73062-73860:-1:exon
so has part: feature:65203-66176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73062-73860:-1:exon

position:73062:-1
position: 73062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65203-66176:-1:exon

position:66176:-1
position: 66176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124482152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124482152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16-like
translation: MALSENGRTQPAKEQGSLQSDVVELNVGGQVYYTRFGTLTSIPNSLLGQLFSNKKGSSNDIARDLKGRYFIDRDGFLFRYVLDYLRDKQVVLPDHFPERGRLRREAEYFQLPDLVKLLTSDESKHFPDDYSDFDDNSDQIFSPYALDHRYGYITVRFKGHCNTGREIQTDFEVKKVPRIFISGRVGLAKEVFGDTLNQGHDVDRPPDRYSSRSYLRFRHMERAFDMLSENGFHFVACCSSLTSSSLSHYTDEKVWSNCTQYVFYRGPARWSSSHCDSCSRGRERESGTSVNELSTSCSETQSEASSPQGTVIYRPPVSAHMLERTGPAHMLDRTGPAHMLDRTGPAYTLDRTGPTHTLDRTGPAHILDRTGPTHTLDRTGPAHVASQVELMRRQTDLLRVRTMGLRQREPAKRRGKDKLTREQEMEKCIQDFHRIRIPEHFPERKHMWQSELLMKYRL
SIO_010081: LOC124482152
subclass of: SO_0000673
so part of: LOC124482152
location: complement(join(65593..66176,73062..73854))
location: region:65593-73854:-1
so has part: feature:73062-73854:-1:exon
so has part: feature:65593-66176:-1:exon

XP_046898539.1
type: Protein
SIO_000068: ncbiprotein

position:65593:-1
position: 65593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73854:-1
position: 73854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73062-73854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65593-66176:-1:exon

nr3c1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: nr3c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79086..95793
location: region:79086-95793:1
so has part: feature:79086-95793:1:exon
subclass of: SO_0000010

124482015
type: Gene
SIO_000068: ncbigene

position:79086:1
position: 79086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95793:1
position: 95793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79086-95793:1:exon

nr3c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: nr3c1
product: nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047042375.1
SIO_010081: nr3c1
subclass of: SO_0000673
so part of: nr3c1
location: join(79086..80078,81300..82540,90264..90430,91411..91527,91670..91951,92107..92251,93774..93904,94129..94286,94443..95793)
location: region:79086-95793:1
so has part: feature:79086-80078:1:exon
so has part: feature:81300-82540:1:exon
so has part: feature:90264-90430:1:exon
so has part: feature:91411-91527:1:exon
so has part: feature:91670-91951:1:exon
so has part: feature:92107-92251:1:exon
so has part: feature:93774-93904:1:exon
so has part: feature:94129-94286:1:exon
so has part: feature:94443-95793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79086-80078:1:exon

position:80078:1
position: 80078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81300-82540:1:exon

position:81300:1
position: 81300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82540:1
position: 82540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90264-90430:1:exon

position:90264:1
position: 90264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90430:1
position: 90430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91411-91527:1:exon

position:91411:1
position: 91411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91527:1
position: 91527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91670-91951:1:exon

position:91670:1
position: 91670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91951:1
position: 91951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92107-92251:1:exon

position:92107:1
position: 92107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92251:1
position: 92251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93774-93904:1:exon

position:93774:1
position: 93774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93904:1
position: 93904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94129-94286:1:exon

position:94129:1
position: 94129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94286:1
position: 94286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94443-95793:1:exon

position:94443:1
position: 94443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nr3c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: nr3c1
product: nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor), transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047042456.1
SIO_010081: nr3c1
subclass of: SO_0000673
so part of: nr3c1
location: join(79087..80078,81300..82540,90264..90415,91411..91527,91670..91951,92107..92251,93774..93904,94129..94286,94443..95793)
location: region:79087-95793:1
so has part: feature:79087-80078:1:exon
so has part: feature:81300-82540:1:exon
so has part: feature:90264-90415:1:exon
so has part: feature:91411-91527:1:exon
so has part: feature:91670-91951:1:exon
so has part: feature:92107-92251:1:exon
so has part: feature:93774-93904:1:exon
so has part: feature:94129-94286:1:exon
so has part: feature:94443-95793:1:exon

position:79087:1
position: 79087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79087-80078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81300-82540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90264-90415:1:exon

position:90415:1
position: 90415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91411-91527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91670-91951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92107-92251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93774-93904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94129-94286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94443-95793:1:exon

nr3c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: nr3c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X1
translation: MDEGGVKRRKSTRDAHLSTLVYRESPAEGAPLRVTPRSAMSVASATSVGLPSSLLMQPGDVLNGLSTSPLPEELTTGSVTASVGLYVEDLELKGQRPQQQLQFPPHQAQSHASSSLGLCAAGENFSRLEASIADLTSASPSMESLIGGSDPSLFLKTEDFSMDKGDPMDLDHDAFGHRDVDVSQKLFNDNTLDLLQDFELTGSPSDFYVGDDAFLSTLGDDDSLMGELSSERDSKPSLAEPGGGGGSSGLNGSSLTPSQDESNSSTSTSTTPTLSAALVVKKEKDAGFLQLCTPGVIKQEKTSAGRSYCQMSSGSTSSSSSGLPSPISICGVSTSSGQSYHFGVSSSSPASSSSSGGAHKDQKPGFSLYPALTTIGEAWSNRTPGYVDASGMQRGDGFSSSPASFSAGFSSSTSRQEGGVVSQSKASGTKVCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGMVARGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLVAGMNLEARKTKKLNRLKGIQPSAPAELSPPPLPEARSLVPRSMPQLIPTMLSLLKAIEPDTIYAGYDSTVPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGDMLCFAPDLVINEERMKLPYMADQCEQMLKISSEFVRLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFEEIRMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMVGGLLNFCFYTFVNKTLSVEFPEMLAEIISNQLPKFKAAV
SIO_010081: nr3c1
subclass of: SO_0000673
so part of: nr3c1
location: join(81309..82540,90264..90430,91411..91527,91670..91951,92107..92251,93774..93904,94129..94286,94443..94568)
location: region:81309-94568:1
so has part: feature:81309-82540:1:exon
so has part: feature:90264-90430:1:exon
so has part: feature:91411-91527:1:exon
so has part: feature:91670-91951:1:exon
so has part: feature:92107-92251:1:exon
so has part: feature:93774-93904:1:exon
so has part: feature:94129-94286:1:exon
so has part: feature:94443-94568:1:exon

XP_046898331.1
type: Protein
SIO_000068: ncbiprotein

position:81309:1
position: 81309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94568:1
position: 94568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81309-82540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90264-90430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91411-91527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91670-91951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92107-92251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93774-93904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94129-94286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94443-94568:1:exon

nr3c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: nr3c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X2
translation: MDEGGVKRRKSTRDAHLSTLVYRESPAEGAPLRVTPRSAMSVASATSVGLPSSLLMQPGDVLNGLSTSPLPEELTTGSVTASVGLYVEDLELKGQRPQQQLQFPPHQAQSHASSSLGLCAAGENFSRLEASIADLTSASPSMESLIGGSDPSLFLKTEDFSMDKGDPMDLDHDAFGHRDVDVSQKLFNDNTLDLLQDFELTGSPSDFYVGDDAFLSTLGDDDSLMGELSSERDSKPSLAEPGGGGGSSGLNGSSLTPSQDESNSSTSTSTTPTLSAALVVKKEKDAGFLQLCTPGVIKQEKTSAGRSYCQMSSGSTSSSSSGLPSPISICGVSTSSGQSYHFGVSSSSPASSSSSGGAHKDQKPGFSLYPALTTIGEAWSNRTPGYVDASGMQRGDGFSSSPASFSAGFSSSTSRQEGGVVSQSKASGTKVCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLVAGMNLEARKTKKLNRLKGIQPSAPAELSPPPLPEARSLVPRSMPQLIPTMLSLLKAIEPDTIYAGYDSTVPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGDMLCFAPDLVINEERMKLPYMADQCEQMLKISSEFVRLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFEEIRMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMVGGLLNFCFYTFVNKTLSVEFPEMLAEIISNQLPKFKAAV
SIO_010081: nr3c1
subclass of: SO_0000673
so part of: nr3c1
location: join(81309..82540,90264..90415,91411..91527,91670..91951,92107..92251,93774..93904,94129..94286,94443..94568)
location: region:81309-94568:1
so has part: feature:81309-82540:1:exon
so has part: feature:90264-90415:1:exon
so has part: feature:91411-91527:1:exon
so has part: feature:91670-91951:1:exon
so has part: feature:92107-92251:1:exon
so has part: feature:93774-93904:1:exon
so has part: feature:94129-94286:1:exon
so has part: feature:94443-94568:1:exon

XP_046898412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81309-82540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90264-90415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91411-91527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91670-91951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92107-92251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93774-93904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94129-94286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94443-94568:1:exon

LOC124466868
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124466868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 101039..103091
location: region:101039-103091:1
so has part: feature:101039-103091:1:exon
subclass of: SO_0000010

124466868
type: Gene
SIO_000068: ncbigene

position:101039:1
position: 101039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103091:1
position: 103091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101039-103091:1:exon

LOC124466868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124466868
product: putative fibroblast growth factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_047018803.1
SIO_010081: LOC124466868
subclass of: SO_0000673
so part of: LOC124466868
location: join(101039..101193,102889..103091)
location: region:101039-103091:1
so has part: feature:101039-101193:1:exon
so has part: feature:102889-103091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101039-101193:1:exon

position:101193:1
position: 101193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102889-103091:1:exon

position:102889:1
position: 102889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124466868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124466868
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: putative fibroblast growth factor 1
translation: MTDGELKVLPGGQERQGIDLQDYTNLTRLYCGHHLQILPDGTVXQRDNGDIHTLTVTEDCYFLENLEENHQNTYRSLTNQDKGWYVGLKKNGKPKLGHRTHVGQKATYFLPRRLENTGE
SIO_010081: LOC124466868
subclass of: SO_0000673
so part of: LOC124466868
location: join(101039..101193,102889..103091)
location: region:101039-103091:1
so has part: feature:101039-101193:1:exon
so has part: feature:102889-103091:1:exon

XP_046874759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101039-101193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102889-103091:1:exon

ndfip1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: ndfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106420..112805)
location: region:106420-112805:-1
so has part: feature:106420-112805:-1:exon
subclass of: SO_0000010

124481848
type: Gene
SIO_000068: ncbigene

position:106420:-1
position: 106420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112805:-1
position: 112805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106420-112805:-1:exon

ndfip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ndfip1
product: Nedd4 family interacting protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047042143.1
SIO_010081: ndfip1
subclass of: SO_0000673
so part of: ndfip1
location: complement(join(106420..107772,110000..110108,110292..110358,110566..110690,110943..111030,111130..111269,111701..111794,112619..112805))
location: region:106420-112805:-1
so has part: feature:112619-112805:-1:exon
so has part: feature:111701-111794:-1:exon
so has part: feature:111130-111269:-1:exon
so has part: feature:110943-111030:-1:exon
so has part: feature:110566-110690:-1:exon
so has part: feature:110292-110358:-1:exon
so has part: feature:110000-110108:-1:exon
so has part: feature:106420-107772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112619-112805:-1:exon

position:112619:-1
position: 112619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111701-111794:-1:exon

position:111701:-1
position: 111701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111794:-1
position: 111794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111130-111269:-1:exon

position:111130:-1
position: 111130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111269:-1
position: 111269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110943-111030:-1:exon

position:110943:-1
position: 110943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111030:-1
position: 111030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110566-110690:-1:exon

position:110566:-1
position: 110566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110690:-1
position: 110690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110292-110358:-1:exon

position:110292:-1
position: 110292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110358:-1
position: 110358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110000-110108:-1:exon

position:110000:-1
position: 110000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110108:-1
position: 110108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106420-107772:-1:exon

position:107772:-1
position: 107772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ndfip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ndfip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MAEQGSNVRYQELVNEEEPGASSQEAVGLDAPPPYSSITAANAAFFDYKEDGGRFPNPPSYNVATTLPSYDEAERSKAEAAAPLVPGRVTEEDFAARDEFDDADQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWVLIVRFSTYFPGYFDGQYWLWWVFLVLGFMLFVRGFVNYSRVRKLADPSYATLPRTRVLFIY
SIO_010081: ndfip1
subclass of: SO_0000673
so part of: ndfip1
location: complement(join(110002..110108,110292..110358,110566..110690,110943..111030,111130..111269,111701..111794,112619..112654))
location: region:110002-112654:-1
so has part: feature:112619-112654:-1:exon
so has part: feature:111701-111794:-1:exon
so has part: feature:111130-111269:-1:exon
so has part: feature:110943-111030:-1:exon
so has part: feature:110566-110690:-1:exon
so has part: feature:110292-110358:-1:exon
so has part: feature:110002-110108:-1:exon

XP_046898099.1
type: Protein
SIO_000068: ncbiprotein

position:110002:-1
position: 110002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112654:-1
position: 112654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112619-112654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111701-111794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111130-111269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110943-111030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110566-110690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110292-110358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110002-110108:-1:exon

gnpda1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gnpda1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(112896..115456)
location: region:112896-115456:-1
so has part: feature:112896-115456:-1:exon
subclass of: SO_0000010

124481771
type: Gene
SIO_000068: ncbigene

position:112896:-1
position: 112896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115456:-1
position: 115456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112896-115456:-1:exon

gnpda1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gnpda1
product: glucosamine-6-phosphate deaminase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047042021.1
SIO_010081: gnpda1
subclass of: SO_0000673
so part of: gnpda1
location: complement(join(112896..113131,113410..113584,113810..113994,114193..114375,114509..114610,114924..115060,115351..115456))
location: region:112896-115456:-1
so has part: feature:115351-115456:-1:exon
so has part: feature:114924-115060:-1:exon
so has part: feature:114509-114610:-1:exon
so has part: feature:114193-114375:-1:exon
so has part: feature:113810-113994:-1:exon
so has part: feature:113410-113584:-1:exon
so has part: feature:112896-113131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115351-115456:-1:exon

position:115351:-1
position: 115351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114924-115060:-1:exon

position:114924:-1
position: 114924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115060:-1
position: 115060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114509-114610:-1:exon

position:114509:-1
position: 114509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114610:-1
position: 114610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114193-114375:-1:exon

position:114193:-1
position: 114193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114375:-1
position: 114375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113810-113994:-1:exon

position:113810:-1
position: 113810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113994:-1
position: 113994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113410-113584:-1:exon

position:113410:-1
position: 113410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113584:-1
position: 113584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:112896-113131:-1:exon

position:113131:-1
position: 113131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gnpda1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gnpda1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1
translation: MKLIILSNYDQASEWAAKYIRNKILRFNPGPDRLFTLGLPTGSTPLGCYKKLIEYYKNGEISFKYVKTFNMDEYVGLPREHPESYHSFMWNNFFKHVDIRAENTHILDGNACDLQQECEAFEGLITAAGGIELFVGGIGPDGHIAFNEPGSSLLSRTRVKTLARDTILANARFFDGDLSKVPTMALTVGVATVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPQTMFVCDEDATLELKVKTVKYFQGMMHVHNKLVAPPV
SIO_010081: gnpda1
subclass of: SO_0000673
so part of: gnpda1
location: complement(join(113088..113131,113410..113584,113810..113994,114193..114375,114509..114610,114924..115047))
location: region:113088-115047:-1
so has part: feature:114924-115047:-1:exon
so has part: feature:114509-114610:-1:exon
so has part: feature:114193-114375:-1:exon
so has part: feature:113810-113994:-1:exon
so has part: feature:113410-113584:-1:exon
so has part: feature:113088-113131:-1:exon

XP_046897977.1
type: Protein
SIO_000068: ncbiprotein

position:113088:-1
position: 113088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115047:-1
position: 115047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114924-115047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114509-114610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114193-114375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113810-113994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113410-113584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113088-113131:-1:exon

LOC124481928
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124481928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116614..118135)
location: region:116614-118135:-1
so has part: feature:116614-118135:-1:exon
subclass of: SO_0000010

124481928
type: Gene
SIO_000068: ncbigene

position:116614:-1
position: 116614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118135:-1
position: 118135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116614-118135:-1:exon

LOC124481928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124481928
product: cytochrome b-c1 complex subunit 8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047042259.1
SIO_010081: LOC124481928
subclass of: SO_0000673
so part of: LOC124481928
location: complement(join(116614..116782,117041..117217,118050..118135))
location: region:116614-118135:-1
so has part: feature:118050-118135:-1:exon
so has part: feature:117041-117217:-1:exon
so has part: feature:116614-116782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118050-118135:-1:exon

position:118050:-1
position: 118050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117041-117217:-1:exon

position:117041:-1
position: 117041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117217:-1
position: 117217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116614-116782:-1:exon

position:116782:-1
position: 116782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124481928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124481928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGRHFGDLAKIRHVITYSLSPFEQRAFPNYFSKGIPNMWRRFRASVFRSAPPMIIMYLTYTWGNHVHEQGKRKNLSDFETPEE
SIO_010081: LOC124481928
subclass of: SO_0000673
so part of: LOC124481928
location: complement(join(116685..116782,117041..117194))
location: region:116685-117194:-1
so has part: feature:117041-117194:-1:exon
so has part: feature:116685-116782:-1:exon

XP_046898215.1
type: Protein
SIO_000068: ncbiprotein

position:116685:-1
position: 116685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117194:-1
position: 117194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117041-117194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116685-116782:-1:exon

gdf9
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gdf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(119432..120703)
location: region:119432-120703:-1
so has part: feature:119432-120703:-1:exon
subclass of: SO_0000010

124470183
type: Gene
SIO_000068: ncbigene

position:119432:-1
position: 119432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120703:-1
position: 120703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119432-120703:-1:exon

gdf9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gdf9
product: growth differentiation factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047023953.1
SIO_010081: gdf9
subclass of: SO_0000673
so part of: gdf9
location: complement(join(119432..120367,120565..120703))
location: region:119432-120703:-1
so has part: feature:120565-120703:-1:exon
so has part: feature:119432-120367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120565-120703:-1:exon

position:120565:-1
position: 120565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119432-120367:-1:exon

position:120367:-1
position: 120367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gdf9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gdf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MKRLYKKSVSQKGAAGTNPLFNTVRLITPRECLERSKEIFMQDLSFNLEQVRAKEQPMKSVLLYSFERPSLVPSVCHLSVQQQQAEQCPLGLGAQHASSFLLGRGRQPASRSRWVEVDVSSFLLPLVQAHQKDINLLINLTCAEERGGKMSRGGSVKMTLSSPSLLLYLNDTSERVSHRRTPGPGQRSAGWNRFETQTDSEAERWVGHNTGRLRRSAPRNRAAKASLPELKSTYDFPTNDCALYDFRVTFSQLKLNHWIIYPHWYNPRYCKGTCPRTMGFMYGSPVHTMVQSIIYERLDASVPRPSCVPSEYKPMNVITEYNGIITYKVYEEMIATRCTCR
SIO_010081: gdf9
subclass of: SO_0000673
so part of: gdf9
location: complement(join(119454..120367,120565..120676))
location: region:119454-120676:-1
so has part: feature:120565-120676:-1:exon
so has part: feature:119454-120367:-1:exon

XP_046879909.1
type: Protein
SIO_000068: ncbiprotein

position:119454:-1
position: 119454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120676:-1
position: 120676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120565-120676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119454-120367:-1:exon

sowahab
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: sowahab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123162..125505)
location: region:123162-125505:-1
so has part: feature:123162-125505:-1:exon
subclass of: SO_0000010

124470158
type: Gene
SIO_000068: ncbigene

position:123162:-1
position: 123162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125505:-1
position: 125505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123162-125505:-1:exon

sowahab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: sowahab
product: sosondowah ankyrin repeat domain family member Ab
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047023922.1
SIO_010081: sowahab
subclass of: SO_0000673
so part of: sowahab
location: complement(123162..125505)
location: region:123162-125505:-1
so has part: feature:123162-125505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123162-125505:-1:exon

sowahab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: sowahab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein SOWAHA
translation: MALTQECIVTFLLENGGKVKNSELVNNFKCQLNCSDPAEKTHNRDIFKKFVNSVAVVKQVNEVKFVVVKKRYQDFVKVGMKYSAHNSDLDDSFSSQTLSLSPTVSELSALVKYESVNISNLDIQNNNTCNSSNRNGNRLNNRADFQHTPVRMSNIGRVLRNGGSCKTSNEDPPTVIKVMNLSYDQVIKTGKTGPVFAIVAVKSPSRGDSPPARQDELNCIPTFSGLKTPVGSKFLIQMPVSLSEGDFMPLPNGPGRVGSEQSVSLWRERSQEETRAPGSPLLRRSRTCRAAEDQQGLGCVPLPPGAHRWMVTAASGLWGQIHGQLQQDSQLVTRKDFMSGYTALHWVAKSGHSEMVHTIMDVSRRTEVRVDVNARTHGGYTPLHLAALHGHAELMLLLLKLYGANANIRDNDGKKPLNYLGPGVSPELLQLLGGGAQAHGGREEEDRDMPRGINTLSRLFMQPHGTHRRKNKLLPGGVSPWD
SIO_010081: sowahab
subclass of: SO_0000673
so part of: sowahab
location: complement(123984..125432)
location: region:123984-125432:-1
so has part: feature:123984-125432:-1:exon

XP_046879878.1
type: Protein
SIO_000068: ncbiprotein

position:123984:-1
position: 123984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125432:-1
position: 125432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123984-125432:-1:exon

LOC124470168
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124470168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126169..137090
location: region:126169-137090:1
so has part: feature:126169-137090:1:exon
subclass of: SO_0000010

124470168
type: Gene
SIO_000068: ncbigene

position:126169:1
position: 126169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137090:1
position: 137090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126169-137090:1:exon

LOC124470168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124470168
product: septin-8-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047023935.1
SIO_010081: LOC124470168
subclass of: SO_0000673
so part of: LOC124470168
location: join(126169..126375,127849..127963,128099..128294,130448..130634,130886..131047,132832..132928,134836..135004,135166..135298,135701..135888,136276..137090)
location: region:126169-137090:1
so has part: feature:126169-126375:1:exon
so has part: feature:127849-127963:1:exon
so has part: feature:128099-128294:1:exon
so has part: feature:130448-130634:1:exon
so has part: feature:130886-131047:1:exon
so has part: feature:132832-132928:1:exon
so has part: feature:134836-135004:1:exon
so has part: feature:135166-135298:1:exon
so has part: feature:135701-135888:1:exon
so has part: feature:136276-137090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126169-126375:1:exon

position:126375:1
position: 126375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127849-127963:1:exon

position:127849:1
position: 127849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127963:1
position: 127963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128099-128294:1:exon

position:128099:1
position: 128099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128294:1
position: 128294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130448-130634:1:exon

position:130448:1
position: 130448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130634:1
position: 130634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130886-131047:1:exon

position:130886:1
position: 130886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131047:1
position: 131047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132832-132928:1:exon

position:132832:1
position: 132832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132928:1
position: 132928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134836-135004:1:exon

position:134836:1
position: 134836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135004:1
position: 135004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135166-135298:1:exon

position:135166:1
position: 135166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135298:1
position: 135298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135701-135888:1:exon

position:135701:1
position: 135701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135888:1
position: 135888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:136276-137090:1:exon

position:136276:1
position: 136276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124470168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124470168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-8-A-like isoform X1
translation: MAATDIDIFTNEEKRKLELGGHVGFDSLPDQLVSKFVTQGFCFNILCVGETGIGKSTLMNTLFNTAFDNEEASHYQDDVHLCPKTYDLHESSVHLKLTVVDSVGFGDQINKEQSYKPVVDYIDTQFENYLQEELKIKRSLFNYHDSRIHICLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKFKIKIMSELVSNGVQIYQFPTEDDAVTEINSSMNAHLPFAVVGSTEEVKVGNKMVRARLYPWGTVQVENESHCDFVKLREMLLRVNMEDLREQTHTRHYELYRRCKLEEMGFKDADTDSQPFSLQETYETKRREFLGELQHKEEEMRQMFVNKVKETEVELKEKERELHERFEQLKRMHQEEKRNLEEKRRDLEEEMNAFNRRKVAAEALMGQALQGSSQPFKKDKDKKN
SIO_010081: LOC124470168
subclass of: SO_0000673
so part of: LOC124470168
location: join(126346..126375,127849..127963,128099..128294,130448..130634,130886..131047,132832..132928,134836..135004,135166..135298,135701..135888,136276..136279)
location: region:126346-136279:1
so has part: feature:126346-126375:1:exon
so has part: feature:127849-127963:1:exon
so has part: feature:128099-128294:1:exon
so has part: feature:130448-130634:1:exon
so has part: feature:130886-131047:1:exon
so has part: feature:132832-132928:1:exon
so has part: feature:134836-135004:1:exon
so has part: feature:135166-135298:1:exon
so has part: feature:135701-135888:1:exon
so has part: feature:136276-136279:1:exon

XP_046879891.1
type: Protein
SIO_000068: ncbiprotein

position:126346:1
position: 126346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136279:1
position: 136279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126346-126375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127849-127963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128099-128294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130448-130634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130886-131047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132832-132928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134836-135004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135166-135298:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135701-135888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136276-136279:1:exon

LOC124470168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124470168
product: septin-8-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047023942.1
SIO_010081: LOC124470168
subclass of: SO_0000673
so part of: LOC124470168
location: join(127715..127744,127849..127963,128099..128294,130448..130634,130886..131047,132832..132928,134836..135004,135166..135298,135701..135888,136276..137090)
location: region:127715-137090:1
so has part: feature:127715-127744:1:exon
so has part: feature:127849-127963:1:exon
so has part: feature:128099-128294:1:exon
so has part: feature:130448-130634:1:exon
so has part: feature:130886-131047:1:exon
so has part: feature:132832-132928:1:exon
so has part: feature:134836-135004:1:exon
so has part: feature:135166-135298:1:exon
so has part: feature:135701-135888:1:exon
so has part: feature:136276-137090:1:exon

position:127715:1
position: 127715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127715-127744:1:exon

position:127744:1
position: 127744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127849-127963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128099-128294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130448-130634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130886-131047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132832-132928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134836-135004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135166-135298:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135701-135888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136276-137090:1:exon

LOC124470168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124470168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-8-A-like isoform X2
translation: MNTLFNTAFDNEEASHYQDDVHLCPKTYDLHESSVHLKLTVVDSVGFGDQINKEQSYKPVVDYIDTQFENYLQEELKIKRSLFNYHDSRIHICLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKFKIKIMSELVSNGVQIYQFPTEDDAVTEINSSMNAHLPFAVVGSTEEVKVGNKMVRARLYPWGTVQVENESHCDFVKLREMLLRVNMEDLREQTHTRHYELYRRCKLEEMGFKDADTDSQPFSLQETYETKRREFLGELQHKEEEMRQMFVNKVKETEVELKEKERELHERFEQLKRMHQEEKRNLEEKRRDLEEEMNAFNRRKVAAEALMGQALQGSSQPFKKDKDKKN
SIO_010081: LOC124470168
subclass of: SO_0000673
so part of: LOC124470168
location: join(128128..128294,130448..130634,130886..131047,132832..132928,134836..135004,135166..135298,135701..135888,136276..136279)
location: region:128128-136279:1
so has part: feature:128128-128294:1:exon
so has part: feature:130448-130634:1:exon
so has part: feature:130886-131047:1:exon
so has part: feature:132832-132928:1:exon
so has part: feature:134836-135004:1:exon
so has part: feature:135166-135298:1:exon
so has part: feature:135701-135888:1:exon
so has part: feature:136276-136279:1:exon

XP_046879898.1
type: Protein
SIO_000068: ncbiprotein

position:128128:1
position: 128128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128128-128294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130448-130634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130886-131047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132832-132928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134836-135004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135166-135298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135701-135888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136276-136279:1:exon

ccng1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: ccng1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 141413..145043
location: region:141413-145043:1
so has part: feature:141413-145043:1:exon
subclass of: SO_0000010

124469065
type: Gene
SIO_000068: ncbigene

position:141413:1
position: 141413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145043:1
position: 145043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141413-145043:1:exon

ccng1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ccng1
product: cyclin G1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022160.1
SIO_010081: ccng1
subclass of: SO_0000673
so part of: ccng1
location: join(141413..141599,142387..142650,142924..143177,143258..143336,143533..143643,143895..145043)
location: region:141413-145043:1
so has part: feature:141413-141599:1:exon
so has part: feature:142387-142650:1:exon
so has part: feature:142924-143177:1:exon
so has part: feature:143258-143336:1:exon
so has part: feature:143533-143643:1:exon
so has part: feature:143895-145043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141413-141599:1:exon

position:141599:1
position: 141599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142387-142650:1:exon

position:142387:1
position: 142387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142650:1
position: 142650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142924-143177:1:exon

position:142924:1
position: 142924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143177:1
position: 143177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143258-143336:1:exon

position:143258:1
position: 143258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143336:1
position: 143336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143533-143643:1:exon

position:143533:1
position: 143533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143643:1
position: 143643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143895-145043:1:exon

position:143895:1
position: 143895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccng1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ccng1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-G1
translation: MIDTVPSPAVQPFSAQLRTLTELESRYQPKLTGLRVIESASDNGLRMTVRLRECEVKDLLSLTRFFGFSSETFSLAVSLLDRFLSVMKIQPKHLSCVGLCCFYIAIKSSEEEKNVPNAADMIRISQNRFSVSDMVRMERIILEKLLWRVKAPTALLFLRLFHSYVQEQLGSDGQEVLRIERLEALLKACHCSFVFSKVKPSLVALALLVLEIHEEHNGDHVHKLLEAVQSLQQLLSVRDGDLVCVRELVAKCLVEYSTTRRSRPNSQRLRWVISGRTARQLKHSYYKITHMPTIPESGC
SIO_010081: ccng1
subclass of: SO_0000673
so part of: ccng1
location: join(142387..142650,142924..143177,143258..143336,143533..143643,143895..144086)
location: region:142387-144086:1
so has part: feature:142387-142650:1:exon
so has part: feature:142924-143177:1:exon
so has part: feature:143258-143336:1:exon
so has part: feature:143533-143643:1:exon
so has part: feature:143895-144086:1:exon

XP_046878116.1
type: Protein
SIO_000068: ncbiprotein

position:144086:1
position: 144086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142387-142650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142924-143177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143258-143336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143533-143643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143895-144086:1:exon

nudcd2
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: nudcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145100..147580)
location: region:145100-147580:-1
so has part: feature:145100-147580:-1:exon
subclass of: SO_0000010

124469076
type: Gene
SIO_000068: ncbigene

position:145100:-1
position: 145100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147580:-1
position: 147580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145100-147580:-1:exon

nudcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: nudcd2
product: NudC domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_047022170.1
SIO_010081: nudcd2
subclass of: SO_0000673
so part of: nudcd2
location: complement(join(145100..145651,145965..146116,147015..147063,147231..147580))
location: region:145100-147580:-1
so has part: feature:147231-147580:-1:exon
so has part: feature:147015-147063:-1:exon
so has part: feature:145965-146116:-1:exon
so has part: feature:145100-145651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147231-147580:-1:exon

position:147231:-1
position: 147231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147015-147063:-1:exon

position:147015:-1
position: 147015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147063:-1
position: 147063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145965-146116:-1:exon

position:145965:-1
position: 145965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146116:-1
position: 146116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145100-145651:-1:exon

position:145651:-1
position: 145651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nudcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: nudcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nudC domain-containing protein 2
translation: MSNHFEERSGVILCRTSWGSWYQTMEEVFIEVNVPHGTSGKEVSCILGSKHIELHVKGQEIFKGKLFGTTVSDEGTWTLEDKCLIRIVLMKTNREAGNCWASLLEGQYCADAWVQDQMQRKLTLERFHRENPGFDFSGAEISGNFAGGGPDFSNLQK
SIO_010081: nudcd2
subclass of: SO_0000673
so part of: nudcd2
location: complement(join(145568..145651,145965..146116,147015..147063,147231..147419))
location: region:145568-147419:-1
so has part: feature:147231-147419:-1:exon
so has part: feature:147015-147063:-1:exon
so has part: feature:145965-146116:-1:exon
so has part: feature:145568-145651:-1:exon

XP_046878126.1
type: Protein
SIO_000068: ncbiprotein

position:145568:-1
position: 145568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147419:-1
position: 147419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147231-147419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147015-147063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145965-146116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145568-145651:-1:exon

aup1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: aup1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147626..151355
location: region:147626-151355:1
so has part: feature:147626-151355:1:exon
subclass of: SO_0000010

124467566
type: Gene
SIO_000068: ncbigene

position:147626:1
position: 147626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151355:1
position: 151355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147626-151355:1:exon

aup1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aup1
product: AUP1 lipid droplet regulating VLDL assembly factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047019893.1
SIO_010081: aup1
subclass of: SO_0000673
so part of: aup1
location: join(147626..147838,148500..148637,148768..148918,148995..149182,149375..149447,149600..149673,149810..149876,149962..150074,150160..150314,150398..150534,150697..150773,150907..151355)
location: region:147626-151355:1
so has part: feature:147626-147838:1:exon
so has part: feature:148500-148637:1:exon
so has part: feature:148768-148918:1:exon
so has part: feature:148995-149182:1:exon
so has part: feature:149375-149447:1:exon
so has part: feature:149600-149673:1:exon
so has part: feature:149810-149876:1:exon
so has part: feature:149962-150074:1:exon
so has part: feature:150160-150314:1:exon
so has part: feature:150398-150534:1:exon
so has part: feature:150697-150773:1:exon
so has part: feature:150907-151355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147626-147838:1:exon

position:147838:1
position: 147838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148500-148637:1:exon

position:148500:1
position: 148500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148637:1
position: 148637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148768-148918:1:exon

position:148768:1
position: 148768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148918:1
position: 148918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148995-149182:1:exon

position:148995:1
position: 148995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149182:1
position: 149182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149375-149447:1:exon

position:149375:1
position: 149375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149447:1
position: 149447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149600-149673:1:exon

position:149600:1
position: 149600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149673:1
position: 149673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149810-149876:1:exon

position:149810:1
position: 149810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149876:1
position: 149876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149962-150074:1:exon

position:149962:1
position: 149962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150074:1
position: 150074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:150160-150314:1:exon

position:150160:1
position: 150160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150314:1
position: 150314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:150398-150534:1:exon

position:150398:1
position: 150398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150534:1
position: 150534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:150697-150773:1:exon

position:150697:1
position: 150697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150773:1
position: 150773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:150907-151355:1:exon

position:150907:1
position: 150907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aup1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aup1
product: AUP1 lipid droplet regulating VLDL assembly factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047019884.1
SIO_010081: aup1
subclass of: SO_0000673
so part of: aup1
location: join(147626..147838,148500..148637,148768..148918,148995..149182,149375..149447,149600..149673,149810..149876,149962..150067,150183..150314,150398..150534,150697..150773,150907..151355)
location: region:147626-151355:1
so has part: feature:147626-147838:1:exon
so has part: feature:148500-148637:1:exon
so has part: feature:148768-148918:1:exon
so has part: feature:148995-149182:1:exon
so has part: feature:149375-149447:1:exon
so has part: feature:149600-149673:1:exon
so has part: feature:149810-149876:1:exon
so has part: feature:149962-150067:1:exon
so has part: feature:150183-150314:1:exon
so has part: feature:150398-150534:1:exon
so has part: feature:150697-150773:1:exon
so has part: feature:150907-151355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147626-147838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148500-148637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148768-148918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148995-149182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149375-149447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149600-149673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149810-149876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149962-150067:1:exon

position:150067:1
position: 150067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:150183-150314:1:exon

position:150183:1
position: 150183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:150398-150534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150697-150773:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150907-151355:1:exon

aup1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aup1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipid droplet-regulating VLDL assembly factor AUP1 isoform X2
translation: METRGIEHMFDFQRLPNDGLVRILLLIYSPIGLCLMLIRIFIGVHVFLVSCALPDSLIRRCIVRIMCSVLGMHVRQNNPRLRDKRVKLYICNHVTEFDHNIINLLTSCNTPMLDGSAGFVCWARGFMELGPAPAPAQLQEALQRYSSSPGTPPLLLFPEEDTTNGRAGMLKFSLWPFSVTESLQPVALQVKRPFLSLSIPESSWLTELLWTFFVPCTVYHVRWLPAVSRQEEETLQDFTNKVQQLLAAELSVASTQITKADKAEHIKRKRHVAPHINTSSKHGWSCVPLGASPRPSPRGAQVRGVDEAGLSRLALQVKDVLPDVPLSVITSDLVQTNCVDATITNLLESTEEFSSEPTGSSAFTSSMSSSSASSPPAVKCFGKSPVDRHMSLQERKEALYDFARRRYIEKHGL
SIO_010081: aup1
subclass of: SO_0000673
so part of: aup1
location: join(147798..147838,148500..148637,148768..148918,148995..149182,149375..149447,149600..149673,149810..149876,149962..150074,150160..150314,150398..150534,150697..150773,150907..150934)
location: region:147798-150934:1
so has part: feature:147798-147838:1:exon
so has part: feature:148500-148637:1:exon
so has part: feature:148768-148918:1:exon
so has part: feature:148995-149182:1:exon
so has part: feature:149375-149447:1:exon
so has part: feature:149600-149673:1:exon
so has part: feature:149810-149876:1:exon
so has part: feature:149962-150074:1:exon
so has part: feature:150160-150314:1:exon
so has part: feature:150398-150534:1:exon
so has part: feature:150697-150773:1:exon
so has part: feature:150907-150934:1:exon

XP_046875849.1
type: Protein
SIO_000068: ncbiprotein

position:147798:1
position: 147798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150934:1
position: 150934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147798-147838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148500-148637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148768-148918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148995-149182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149375-149447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149600-149673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149810-149876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149962-150074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150160-150314:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:150398-150534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150697-150773:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150907-150934:1:exon

aup1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aup1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipid droplet-regulating VLDL assembly factor AUP1 isoform X1
translation: METRGIEHMFDFQRLPNDGLVRILLLIYSPIGLCLMLIRIFIGVHVFLVSCALPDSLIRRCIVRIMCSVLGMHVRQNNPRLRDKRVKLYICNHVTEFDHNIINLLTSCNTPMLDGSAGFVCWARGFMELGPAPAPAQLQEALQRYSSSPGTPPLLLFPEEDTTNGRAGMLKFSLWPFSVTESLQPVALQVKRPFLSLSIPESSWLTELLWTFFVPCTVYHVRWLPAVSRQEEETLQDFTNKVQQLLAAELSVASTQITKADKAEHIKRKRHVAPHINTSSASPRPSPRGAQVRGVDEAGLSRLALQVKDVLPDVPLSVITSDLVQTNCVDATITNLLESTEEFSSEPTGSSAFTSSMSSSSASSPPAVKCFGKSPVDRHMSLQERKEALYDFARRRYIEKHGL
SIO_010081: aup1
subclass of: SO_0000673
so part of: aup1
location: join(147798..147838,148500..148637,148768..148918,148995..149182,149375..149447,149600..149673,149810..149876,149962..150067,150183..150314,150398..150534,150697..150773,150907..150934)
location: region:147798-150934:1
so has part: feature:147798-147838:1:exon
so has part: feature:148500-148637:1:exon
so has part: feature:148768-148918:1:exon
so has part: feature:148995-149182:1:exon
so has part: feature:149375-149447:1:exon
so has part: feature:149600-149673:1:exon
so has part: feature:149810-149876:1:exon
so has part: feature:149962-150067:1:exon
so has part: feature:150183-150314:1:exon
so has part: feature:150398-150534:1:exon
so has part: feature:150697-150773:1:exon
so has part: feature:150907-150934:1:exon

XP_046875840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147798-147838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148500-148637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148768-148918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148995-149182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149375-149447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149600-149673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149810-149876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149962-150067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150183-150314:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:150398-150534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150697-150773:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150907-150934:1:exon

trpc3
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: trpc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151412..158369
location: region:151412-158369:1
so has part: feature:151412-158369:1:exon
subclass of: SO_0000010

124467588
type: Gene
SIO_000068: ncbigene

position:151412:1
position: 151412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158369:1
position: 158369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151412-158369:1:exon

trpc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: trpc3
product: transient receptor potential cation channel, subfamily C, member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047019912.1
SIO_010081: trpc3
subclass of: SO_0000673
so part of: trpc3
location: join(151412..151667,151769..151961,152156..152927,153158..153205,153437..153622,154128..154292,155071..155287,155384..155617,156052..156316,156723..156918,157047..157256,157423..157488,157600..157675,157804..158369)
location: region:151412-158369:1
so has part: feature:151412-151667:1:exon
so has part: feature:151769-151961:1:exon
so has part: feature:152156-152927:1:exon
so has part: feature:153158-153205:1:exon
so has part: feature:153437-153622:1:exon
so has part: feature:154128-154292:1:exon
so has part: feature:155071-155287:1:exon
so has part: feature:155384-155617:1:exon
so has part: feature:156052-156316:1:exon
so has part: feature:156723-156918:1:exon
so has part: feature:157047-157256:1:exon
so has part: feature:157423-157488:1:exon
so has part: feature:157600-157675:1:exon
so has part: feature:157804-158369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151412-151667:1:exon

position:151667:1
position: 151667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151769-151961:1:exon

position:151769:1
position: 151769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151961:1
position: 151961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152156-152927:1:exon

position:152156:1
position: 152156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152927:1
position: 152927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153158-153205:1:exon

position:153158:1
position: 153158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153205:1
position: 153205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153437-153622:1:exon

position:153437:1
position: 153437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153622:1
position: 153622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154128-154292:1:exon

position:154128:1
position: 154128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154292:1
position: 154292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155071-155287:1:exon

position:155071:1
position: 155071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155287:1
position: 155287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155384-155617:1:exon

position:155384:1
position: 155384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155617:1
position: 155617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:156052-156316:1:exon

position:156052:1
position: 156052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156316:1
position: 156316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156723-156918:1:exon

position:156723:1
position: 156723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156918:1
position: 156918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:157047-157256:1:exon

position:157047:1
position: 157047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157256:1
position: 157256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:157423-157488:1:exon

position:157423:1
position: 157423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157488:1
position: 157488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:157600-157675:1:exon

position:157600:1
position: 157600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157675:1
position: 157675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:157804-158369:1:exon

position:157804:1
position: 157804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trpc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: trpc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 3
translation: MTDDPNSLLLSVSTTTDLATHRRMNAARDRGRRIGVRGPALMFNGRGTKLTAEEERFLDAAEYGNIPVVRKMLEEMPALNVNCVDYMGQNGLQLAVGNEHLEVTELLLRKDNLARIGDALLLAISKGYVRIVETILAHPSFVTSERLTRSPRDLEDDDFYSYDEDGTRFSPDITPVILAAQCQKYEVVHMLLLKGARIEQPHDYFCKCEDCTEKHLNDSFSHSRARINAYRGLASPAYLSLSSEDPVFMALELSNELAKLANIEKEFKEKKNIKKETTHNCFSLNDYRKLSLQCKDFAVGVLDLCRDTEEVEAILNGDISNETEERQRRHSLLNRVKLAIKYEVKKFVAHPNCQQQLLSLWYEDLSFLREQSLLVKCLVVLLVGLGLPLLATAYWLCPCSKLGTVLRSPFMKFVAHAASFIIFLCLLVFSASDRFTGITTLPNETITEHPRQVFRVTTTRFSCTEGLIIIWVAGMMWSQCKELWTQGCREYILQLWHVLDFGMLSIFTASFTARFIAFHLANKAQKYVDDQVQASDLSLVTLPPHVRYFTYARARWSPSDPQLISEGLYSIAVVLSFLRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVNLAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLFGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGRTLPPPFSMVPSPKSFLRVIQAVVCRLRCPRRSLERKTDLGRYYSKSRANHQMAELHSLNSQLNQPTGYQQIMKRLVKRYVLKAQVDKESDEVNEGELKEIKQDISSLRYELLEDKSQVTEELYLIIHKLGTQLNPVSTHYADTGDTENGLAQQTNIYATI
SIO_010081: trpc3
subclass of: SO_0000673
so part of: trpc3
location: join(151930..151961,152156..152927,153158..153205,153437..153622,154128..154292,155071..155287,155384..155617,156052..156316,156723..156918,157047..157256,157423..157488,157600..157675,157804..158003)
location: region:151930-158003:1
so has part: feature:151930-151961:1:exon
so has part: feature:152156-152927:1:exon
so has part: feature:153158-153205:1:exon
so has part: feature:153437-153622:1:exon
so has part: feature:154128-154292:1:exon
so has part: feature:155071-155287:1:exon
so has part: feature:155384-155617:1:exon
so has part: feature:156052-156316:1:exon
so has part: feature:156723-156918:1:exon
so has part: feature:157047-157256:1:exon
so has part: feature:157423-157488:1:exon
so has part: feature:157600-157675:1:exon
so has part: feature:157804-158003:1:exon

XP_046875868.1
type: Protein
SIO_000068: ncbiprotein

position:151930:1
position: 151930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158003:1
position: 158003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151930-151961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152156-152927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153158-153205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153437-153622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154128-154292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155071-155287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155384-155617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156052-156316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156723-156918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157047-157256:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157423-157488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157600-157675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157804-158003:1:exon

LOC124467579
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124467579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 158416..164514
location: region:158416-164514:1
so has part: feature:158416-164514:1:exon
subclass of: SO_0000010

124467579
type: Gene
SIO_000068: ncbigene

position:158416:1
position: 158416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164514:1
position: 164514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158416-164514:1:exon

LOC124467579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124467579
product: glutathione S-transferase P-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047019898.1
SIO_010081: LOC124467579
subclass of: SO_0000673
so part of: LOC124467579
location: join(158416..158494,158928..158963,162683..162789,162924..163011,163462..163565,163837..163938,164028..164514)
location: region:158416-164514:1
so has part: feature:158416-158494:1:exon
so has part: feature:158928-158963:1:exon
so has part: feature:162683-162789:1:exon
so has part: feature:162924-163011:1:exon
so has part: feature:163462-163565:1:exon
so has part: feature:163837-163938:1:exon
so has part: feature:164028-164514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158416-158494:1:exon

position:158494:1
position: 158494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158928-158963:1:exon

position:158928:1
position: 158928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158963:1
position: 158963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162683-162789:1:exon

position:162683:1
position: 162683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162789:1
position: 162789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162924-163011:1:exon

position:162924:1
position: 162924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163011:1
position: 163011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163462-163565:1:exon

position:163462:1
position: 163462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163565:1
position: 163565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163837-163938:1:exon

position:163837:1
position: 163837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163938:1
position: 163938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164028-164514:1:exon

position:164028:1
position: 164028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124467579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124467579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase P-like
translation: MPPYTITYFAVRGRCSAAKIMLADQGQQWKDIVVNFEDWMKGDLKATCVFGQLPKFEDGDLALFQSNAILRHLGRNHGAYGKDAKEASLIDMMNDGVEDLRLKYGRLIYQEYETGKDQYLKDLPDHLSKFEAVMARNKTGFLVGDKVSFADYNLFDILLNHLVLCDCCLDSFPSLKSFVEKMSARPKIKVFTDSDAYKKQPINGNGKQ
SIO_010081: LOC124467579
subclass of: SO_0000673
so part of: LOC124467579
location: join(158494,158928..158963,162683..162789,162924..163011,163462..163565,163837..163938,164028..164216)
location: region:158494-164216:1
so has part: feature:158494-158494:1:exon
so has part: feature:158928-158963:1:exon
so has part: feature:162683-162789:1:exon
so has part: feature:162924-163011:1:exon
so has part: feature:163462-163565:1:exon
so has part: feature:163837-163938:1:exon
so has part: feature:164028-164216:1:exon

XP_046875854.1
type: Protein
SIO_000068: ncbiprotein

position:164216:1
position: 164216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158494-158494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158928-158963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162683-162789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162924-163011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163462-163565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163837-163938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164028-164216:1:exon

fnta
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: fnta
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165282..170690
location: region:165282-170690:1
so has part: feature:165282-170690:1:exon
subclass of: SO_0000010

124470354
type: Gene
SIO_000068: ncbigene

position:165282:1
position: 165282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170690:1
position: 170690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165282-170690:1:exon

fnta
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: fnta
product: farnesyltransferase, CAAX box, alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047024198.1
SIO_010081: fnta
subclass of: SO_0000673
so part of: fnta
location: join(165282..165523,165900..165985,166790..166904,167006..167110,167879..168005,168877..169025,169360..169422,169789..169960,170063..170690)
location: region:165282-170690:1
so has part: feature:165282-165523:1:exon
so has part: feature:165900-165985:1:exon
so has part: feature:166790-166904:1:exon
so has part: feature:167006-167110:1:exon
so has part: feature:167879-168005:1:exon
so has part: feature:168877-169025:1:exon
so has part: feature:169360-169422:1:exon
so has part: feature:169789-169960:1:exon
so has part: feature:170063-170690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165282-165523:1:exon

position:165523:1
position: 165523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165900-165985:1:exon

position:165900:1
position: 165900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165985:1
position: 165985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166790-166904:1:exon

position:166790:1
position: 166790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166904:1
position: 166904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167006-167110:1:exon

position:167006:1
position: 167006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167110:1
position: 167110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167879-168005:1:exon

position:167879:1
position: 167879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168005:1
position: 168005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168877-169025:1:exon

position:168877:1
position: 168877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169025:1
position: 169025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169360-169422:1:exon

position:169360:1
position: 169360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169422:1
position: 169422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169789-169960:1:exon

position:169789:1
position: 169789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169960:1
position: 169960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:170063-170690:1:exon

position:170063:1
position: 170063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fnta
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: fnta
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
translation: MSGLEDNYGIPSEFQGENEGEGDFEEEPEADYVNPFRYVFYRDRKEWSDLEGVPQDDGPNPVVKIAYSDKFTDVYDYFRALLKNDEKSERALSLTAEAIELNAANYTVWHYRRVLLQALDKDLREEMNYITAIIEDQPKNYQVWHHRRIVVEWLNDPSEELEFIADILNQDAKNYHAWQHRQWVIQEYSLWDRELEYVDQLLEEDVRNNSAWNQRHFVVSHTTGYSDPAVLDREVRYCLKQIKKAPHNESAWNYLKGILQDRGLSTHPGLLEQVLELRQTHCSPYLLAFLVDSYEDALECSSSPQEECLSRALELCEVLAQEKDTIRREYWRYVGRSLESKYGPVVRSEVAPDSAPGPEGEGSS
SIO_010081: fnta
subclass of: SO_0000673
so part of: fnta
location: join(165399..165523,165900..165985,166790..166904,167006..167110,167879..168005,168877..169025,169360..169422,169789..169960,170063..170215)
location: region:165399-170215:1
so has part: feature:165399-165523:1:exon
so has part: feature:165900-165985:1:exon
so has part: feature:166790-166904:1:exon
so has part: feature:167006-167110:1:exon
so has part: feature:167879-168005:1:exon
so has part: feature:168877-169025:1:exon
so has part: feature:169360-169422:1:exon
so has part: feature:169789-169960:1:exon
so has part: feature:170063-170215:1:exon

XP_046880154.1
type: Protein
SIO_000068: ncbiprotein

position:165399:1
position: 165399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170215:1
position: 170215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165399-165523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165900-165985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166790-166904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167006-167110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167879-168005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168877-169025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169360-169422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169789-169960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170063-170215:1:exon

LOC124470364
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124470364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 170767..172977
location: region:170767-172977:1
so has part: feature:170767-172977:1:exon
subclass of: SO_0000010

124470364
type: Gene
SIO_000068: ncbigene

position:170767:1
position: 170767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172977:1
position: 172977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170767-172977:1:exon

LOC124470364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124470364
product: transmembrane protein 271-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047024207.1
SIO_010081: LOC124470364
subclass of: SO_0000673
so part of: LOC124470364
location: 170767..172977
location: region:170767-172977:1
so has part: feature:170767-172977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170767-172977:1:exon

LOC124470364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124470364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 271-like
translation: MKLSGKGLCTIISSTLLFLCAVSEVVVGFKCIAMGTRVKVHFHLGTAAGAFYSGILIVIGQALLGFALLCCKGKPGCRNFFLLGILVFLLGVLTAFSGAVVDGDTVSLVERKYSHYCLHSVDLNHMCEQLKEYQRGLVISTTLSTLECLLGLMNLIIIKKYKTAQFYRRRQSQRQSTGAIIFNEEQDFSSAEFQPVSYINLGVFHVFDEAGVEVQCGGHPSVELPGYSPTDPELNHSYPFSYPLPSELPPAYEDIFPGEESNK
SIO_010081: LOC124470364
subclass of: SO_0000673
so part of: LOC124470364
location: 171642..172433
location: region:171642-172433:1
so has part: feature:171642-172433:1:exon

XP_046880163.1
type: Protein
SIO_000068: ncbiprotein

position:171642:1
position: 171642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172433:1
position: 172433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171642-172433:1:exon

pigg
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(185041..215674)
location: region:185041-215674:-1
so has part: feature:185041-215674:-1:exon
subclass of: SO_0000010

124478851
type: Gene
SIO_000068: ncbigene

position:185041:-1
position: 185041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215674:-1
position: 215674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185041-215674:-1:exon

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047037332.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(185041..186342,191930..192093,193222..193531,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:185041-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:193222-193531:-1:exon
so has part: feature:191930-192093:-1:exon
so has part: feature:185041-186342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

position:215081:-1
position: 215081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

position:214258:-1
position: 214258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214463:-1
position: 214463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

position:211575:-1
position: 211575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211784:-1
position: 211784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

position:210935:-1
position: 210935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211123:-1
position: 211123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

position:206895:-1
position: 206895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207033:-1
position: 207033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

position:206217:-1
position: 206217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206429:-1
position: 206429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

position:201494:-1
position: 201494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201711:-1
position: 201711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

position:199929:-1
position: 199929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200213:-1
position: 200213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

position:198396:-1
position: 198396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198796:-1
position: 198796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

position:196644:-1
position: 196644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196835:-1
position: 196835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193222-193531:-1:exon

position:193222:-1
position: 193222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193531:-1
position: 193531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:191930-192093:-1:exon

position:191930:-1
position: 191930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192093:-1
position: 192093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:185041-186342:-1:exon

position:186342:-1
position: 186342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X1
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNSSEHKTALSLLAAFSLALIYFLVQRRCSWVSRVALALGLLGVFSYRAAVGNVLFPWQHAGRNMSKGTVEARFVYVFVLGILFSGSRDLLRSQVVSADARLQSRGLWELYSGVVLLVALLLRPHNLPVLACCLLVQTLMARFIWSPLHYRPAHTSVMHYWFGQAFFYFQGNSNNIASVDISVGFVGLESYVEAPAIFLTALTTYAGPLLWACHLLYYLSTHSHRSSVGLGHGCYCLAVLRSVPVATYVVLVTVLRYHLFIWSVFSPKLLYEALHTVITAGLCLLFTTMEQRHPSRA
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(186123..186342,191930..192093,193222..193531,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:186123-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:193222-193531:-1:exon
so has part: feature:191930-192093:-1:exon
so has part: feature:186123-186342:-1:exon

XP_046893288.1
type: Protein
SIO_000068: ncbiprotein

position:186123:-1
position: 186123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215234:-1
position: 215234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193222-193531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191930-192093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:186123-186342:-1:exon

pigg
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_006957345.1
SIO_010081: pigg
so part of: pigg
location: complement(join(186265..186342,191696..191780,191930..192093,193222..193531,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:186265-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:193222-193531:-1:exon
so has part: feature:191930-192093:-1:exon
so has part: feature:191696-191780:-1:exon
so has part: feature:186265-186342:-1:exon

position:186265:-1
position: 186265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193222-193531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191930-192093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191696-191780:-1:exon

position:191696:-1
position: 191696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191780:-1
position: 191780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:186265-186342:-1:exon

pigg
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_006957349.1
SIO_010081: pigg
so part of: pigg
location: complement(join(191203..191559,191696..191780,191930..192093,193222..193531,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:191203-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:193222-193531:-1:exon
so has part: feature:191930-192093:-1:exon
so has part: feature:191696-191780:-1:exon
so has part: feature:191203-191559:-1:exon

position:191203:-1
position: 191203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193222-193531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191930-192093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191696-191780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191203-191559:-1:exon

position:191559:-1
position: 191559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_047037467.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(193340..193531,194693..194789,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:193340-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:194693-194789:-1:exon
so has part: feature:193340-193531:-1:exon

position:193340:-1
position: 193340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194693-194789:-1:exon

position:194693:-1
position: 194693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194789:-1
position: 194789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193340-193531:-1:exon

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X2
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNSSEHKTALSLLAAFSLALIYFLVQRRCSWVSRVALALGLLGVFSYRAAVGNVLFPWQHAGRNMSKGIVLDCHRYCGYQRRAWTGETGKEKQETPPSQGNGGGTLRVRVCAGHPVQRLQGPAALAGGLG
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(193436..193531,194693..194789,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:193436-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:194693-194789:-1:exon
so has part: feature:193436-193531:-1:exon

XP_046893423.1
type: Protein
SIO_000068: ncbiprotein

position:193436:-1
position: 193436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194693-194789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193436-193531:-1:exon

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_047037550.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(194701..195521,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:194701-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:194701-195521:-1:exon

position:194701:-1
position: 194701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194701-195521:-1:exon

position:195521:-1
position: 195521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pigg
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_006957358.1
SIO_010081: pigg
so part of: pigg
location: complement(join(194709..194789,195306..195521,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:194709-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:195306-195521:-1:exon
so has part: feature:194709-194789:-1:exon

position:194709:-1
position: 194709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195306-195521:-1:exon

position:195306:-1
position: 195306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:194709-194789:-1:exon

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X3
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNSSEHKTALSLLAAFSLALIYFLVQRRCSWVSRVALALGLLGVFSYRAAVGNVLFPWQHAGRNMSNDAW
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(195509..195521,196644..196835,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:195509-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196644-196835:-1:exon
so has part: feature:195509-195521:-1:exon

XP_046893506.1
type: Protein
SIO_000068: ncbiprotein

position:195509:-1
position: 195509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196644-196835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195509-195521:-1:exon

pigg
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_006957382.1
SIO_010081: pigg
so part of: pigg
location: complement(join(196744..196835,197053..197146,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:196744-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:197053-197146:-1:exon
so has part: feature:196744-196835:-1:exon

position:196744:-1
position: 196744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197053-197146:-1:exon

position:197053:-1
position: 197053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197146:-1
position: 197146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:196744-196835:-1:exon

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_047037842.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(196946..197146,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:196946-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196946-197146:-1:exon

position:196946:-1
position: 196946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196946-197146:-1:exon

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_047037762.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(196946..197318,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:196946-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:196946-197318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196946-197318:-1:exon

position:197318:-1
position: 197318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X6
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNRTEFVSVLI
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(197119..197146,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:197119-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:197119-197146:-1:exon

XP_046893798.1
type: Protein
SIO_000068: ncbiprotein

position:197119:-1
position: 197119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197119-197146:-1:exon

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X5
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNRFLSDCERHEGSA
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(197279..197318,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:197279-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:197279-197318:-1:exon

XP_046893718.1
type: Protein
SIO_000068: ncbiprotein

position:197279:-1
position: 197279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197279-197318:-1:exon

pigg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pigg
product: phosphatidylinositol glycan anchor biosynthesis class G, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_047037678.1
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(198169..198306,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215674))
location: region:198169-215674:-1
so has part: feature:215081-215674:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:198169-198306:-1:exon

position:198169:-1
position: 198169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198169-198306:-1:exon

position:198306:-1
position: 198306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pigg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pigg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI ethanolamine phosphate transferase 2 isoform X4
translation: MRVRSSVFASFCLIFEVLGIALFLRGFFPVPIKSSFSSKNSLLDLPAEPGTGNSANASTAPQPLFKRVVIMLIDALREDFLFGPNGRTYMPYTRHVVERGSSHSFVAKARPPTVTMPRIKALTTGTIPGFIDVVMNLNSPALTEDNLIWQAKTAGRRLIFYGDDTWVRLFPKHFLEHDGTSSFFVSDYTEVDNNVTRHLDVTLKRDDWDVLILHYLGLDHIGHTSGPHSSLIQPKLLEMDDILKKIHASLISKEEEGSLPYMLVLCADHGMSDTGSHGGSSEPEVNTPLVLISPAFRRKVGMEKPSVVEQVDLPSSLALGLGLAVPQNSVGHLLLPLLEELPLRQQLRYLQLNTHQLSTLLRDSTTDYQREAGYEQARVAQKAHSSWLRLQQEGSTPEVLSSQGSKAVQLYQQALASLSSALSKQLGRYDLYSMLVGMALVFQSVLLLLLALPEALGGSGEVEVPVSAALLAPPCYLLSLLLCSAHVLLCTSAQASCYSCSLPWGLVFPALAFSSALLCILLSMATRRLPLGAKPPGKSPVRGVWSVSELEALLLLGTAGHTLSLAASSFVEEEHQTWYFLLSTLCLALFQDVCRTYFREPRGPVDPLLPCSEEPLAPSPAYPLGGKGAGAERWLALATPVVTLACCRLLRSLNQTGVQWAHLPDLGHWLNRRGAEGQVAGLFTWTHSWTHSTMKCAQARAGSRSS
SIO_010081: pigg
subclass of: SO_0000673
so part of: pigg
location: complement(join(198201..198306,198396..198796,199929..200213,201494..201711,206217..206429,206895..207033,210935..211123,211575..211784,214258..214463,215081..215234))
location: region:198201-215234:-1
so has part: feature:215081-215234:-1:exon
so has part: feature:214258-214463:-1:exon
so has part: feature:211575-211784:-1:exon
so has part: feature:210935-211123:-1:exon
so has part: feature:206895-207033:-1:exon
so has part: feature:206217-206429:-1:exon
so has part: feature:201494-201711:-1:exon
so has part: feature:199929-200213:-1:exon
so has part: feature:198396-198796:-1:exon
so has part: feature:198201-198306:-1:exon

XP_046893634.1
type: Protein
SIO_000068: ncbiprotein

position:198201:-1
position: 198201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215081-215234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214258-214463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211575-211784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210935-211123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206895-207033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206217-206429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201494-201711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199929-200213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198396-198796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198201-198306:-1:exon

kctd8
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: kctd8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221426..227567)
location: region:221426-227567:-1
so has part: feature:221426-227567:-1:exon
subclass of: SO_0000010

124469108
type: Gene
SIO_000068: ncbigene

position:221426:-1
position: 221426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227567:-1
position: 227567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221426-227567:-1:exon

kctd8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: kctd8
product: potassium channel tetramerization domain containing 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_047022202.1
SIO_010081: kctd8
subclass of: SO_0000673
so part of: kctd8
location: complement(join(221426..222393,226671..227567))
location: region:221426-227567:-1
so has part: feature:226671-227567:-1:exon
so has part: feature:221426-222393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226671-227567:-1:exon

position:226671:-1
position: 226671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221426-222393:-1:exon

position:222393:-1
position: 222393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kctd8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: kctd8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein KCTD8
translation: MAMKESILPISEVSSPYPEVVELNVGGQVYVTKRSTLLSVPDTTLHAMFALSPPRELPRDSRGRFFIDRDGFLFRYVLDFLRDRQLVLPEHFPERERLQREAEHFHLGELQRLLGPRLARHASMNDEGCHSDXEESSQASEHPAARNPASLSDKRSGFITVGYRGSYTTLRESQADAKFRRVARITVCGRIALAKEVFGETLNESRDPDRPPDKYTSRFYLKFTYLEHAFDRLSDAGFHMVACNSTGTAAFVSQYRDLDKVWSSYTEYIFFRPSCLTLSPKQDCDEHKQEKLTDKGSESGTSLKELSTSSSETHSEASSPQDGPVVGVVVGGCGALQSVSRQPSTLTLGRPSKKGSSVQWMQQPSKRRNSELFQSLTGGGEEGLGRRKERPGVEEDMRQCIQDFHNITIPQDFPERKRQWQSELLQKYGL
SIO_010081: kctd8
subclass of: SO_0000673
so part of: kctd8
location: complement(join(221915..222393,226671..227484))
location: region:221915-227484:-1
so has part: feature:226671-227484:-1:exon
so has part: feature:221915-222393:-1:exon

XP_046878158.1
type: Protein
SIO_000068: ncbiprotein

position:221915:-1
position: 221915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227484:-1
position: 227484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226671-227484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221915-222393:-1:exon

guf1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: guf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(228266..234781)
location: region:228266-234781:-1
so has part: feature:228266-234781:-1:exon
subclass of: SO_0000010

124467090
type: Gene
SIO_000068: ncbigene

position:228266:-1
position: 228266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234781:-1
position: 234781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228266-234781:-1:exon

guf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: guf1
product: GTP binding elongation factor GUF1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_047019218.1
SIO_010081: guf1
subclass of: SO_0000673
so part of: guf1
location: complement(join(228266..228752,228878..228914,229743..229862,230085..230186,230279..230411,230920..231063,231168..231299,231773..231896,232014..232154,232369..232574,232705..232769,232857..232940,233065..233142,233283..233363,233827..233975,234182..234293,234519..234781))
location: region:228266-234781:-1
so has part: feature:234519-234781:-1:exon
so has part: feature:234182-234293:-1:exon
so has part: feature:233827-233975:-1:exon
so has part: feature:233283-233363:-1:exon
so has part: feature:233065-233142:-1:exon
so has part: feature:232857-232940:-1:exon
so has part: feature:232705-232769:-1:exon
so has part: feature:232369-232574:-1:exon
so has part: feature:232014-232154:-1:exon
so has part: feature:231773-231896:-1:exon
so has part: feature:231168-231299:-1:exon
so has part: feature:230920-231063:-1:exon
so has part: feature:230279-230411:-1:exon
so has part: feature:230085-230186:-1:exon
so has part: feature:229743-229862:-1:exon
so has part: feature:228878-228914:-1:exon
so has part: feature:228266-228752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234519-234781:-1:exon

position:234519:-1
position: 234519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234182-234293:-1:exon

position:234182:-1
position: 234182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234293:-1
position: 234293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233827-233975:-1:exon

position:233827:-1
position: 233827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233975:-1
position: 233975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233283-233363:-1:exon

position:233283:-1
position: 233283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233363:-1
position: 233363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233065-233142:-1:exon

position:233065:-1
position: 233065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233142:-1
position: 233142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232857-232940:-1:exon

position:232857:-1
position: 232857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232940:-1
position: 232940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232705-232769:-1:exon

position:232705:-1
position: 232705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232769:-1
position: 232769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:232369-232574:-1:exon

position:232369:-1
position: 232369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232574:-1
position: 232574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:232014-232154:-1:exon

position:232014:-1
position: 232014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232154:-1
position: 232154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231773-231896:-1:exon

position:231773:-1
position: 231773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231896:-1
position: 231896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:231168-231299:-1:exon

position:231168:-1
position: 231168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231299:-1
position: 231299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:230920-231063:-1:exon

position:230920:-1
position: 230920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231063:-1
position: 231063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:230279-230411:-1:exon

position:230279:-1
position: 230279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230411:-1
position: 230411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:230085-230186:-1:exon

position:230085:-1
position: 230085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230186:-1
position: 230186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:229743-229862:-1:exon

position:229743:-1
position: 229743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229862:-1
position: 229862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:228878-228914:-1:exon

position:228878:-1
position: 228878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228914:-1
position: 228914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:228266-228752:-1:exon

position:228752:-1
position: 228752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

guf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: guf1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: translation factor Guf1, mitochondrial
translation: MIKALNMIFSLYSSQFAYKTIFCRRILDLRILRTRLRNQGNHTTCTILRHRWMKNVPVLSQNNTTTMFSTQPEKKHFDMSEFPVERIRNFSIIAHIDHGKSTLADRLLEMTGAITKTEKNKQVLDKLQVERERGITVKAQTASLFYTHQGQTYLLNLIDTPGHVDFSYEVSRSISACQGVLLIVDANQGIQAQTVANFYLAFEAQLTIIPVINKIDLKNADPERVEKQIEKVFDIPCEECIRISAKLGTNVDQVLQEVIVRIPPPTARTEEPFRALVFDSNFDHYRGVVANIAVFGGQVSKGDRIVSAYLGKTYEVNELGILRPEESPTSTLFAGQVGYMVAGMKEVKEAQIGDTLYSLKQPVEALPGFKPAKPMVFAGMYPVDQSDYSALRSAVEKLTLNDSSVMVKRDSSLALGAGWRLGFLGLLHMEVFNQRLEQEYNASVIVTAPXVPYRAVLSSPRLIKEHGAQEITIVSPAQFPDRSVVSEYLEPMVLGTIIAPDDYISRIMSLCLNRRALQKNMVYIDEHRVMMXYLFPLNEVVVDFYDLLKSMSSGYASFDYEEAGYQAADLIKMDILLNGRPVEELTTIVHRDKAYSAGKAMCERLKDSIPRQMFEIAVQASIGSKVIARETIKAFRKNVLAKCYGGDXTRKMKLLKKQAEGKKKMRRIGNVDVPKDAFISVLKRKDK
SIO_010081: guf1
subclass of: SO_0000673
so part of: guf1
location: complement(join(228619..228752,228878..228914,229743..229862,230085..230186,230279..230411,230920..231063,231168..231299,231773..231896,232014..232154,232369..232574,232705..232769,232857..232940,233065..233142,233283..233363,233827..233975,234182..234293,234519..234740))
location: region:228619-234740:-1
so has part: feature:234519-234740:-1:exon
so has part: feature:234182-234293:-1:exon
so has part: feature:233827-233975:-1:exon
so has part: feature:233283-233363:-1:exon
so has part: feature:233065-233142:-1:exon
so has part: feature:232857-232940:-1:exon
so has part: feature:232705-232769:-1:exon
so has part: feature:232369-232574:-1:exon
so has part: feature:232014-232154:-1:exon
so has part: feature:231773-231896:-1:exon
so has part: feature:231168-231299:-1:exon
so has part: feature:230920-231063:-1:exon
so has part: feature:230279-230411:-1:exon
so has part: feature:230085-230186:-1:exon
so has part: feature:229743-229862:-1:exon
so has part: feature:228878-228914:-1:exon
so has part: feature:228619-228752:-1:exon

XP_046875174.1
type: Protein
SIO_000068: ncbiprotein

position:228619:-1
position: 228619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234740:-1
position: 234740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234519-234740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234182-234293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233827-233975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233283-233363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233065-233142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232857-232940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232705-232769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232369-232574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232014-232154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231773-231896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231168-231299:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230920-231063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230279-230411:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230085-230186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:229743-229862:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:228878-228914:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:228619-228752:-1:exon

LOC124467667
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124467667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246097..267402)
location: region:246097-267402:-1
so has part: feature:246097-267402:-1:exon
subclass of: SO_0000010

124467667
type: Gene
SIO_000068: ncbigene

position:246097:-1
position: 246097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267402:-1
position: 267402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246097-267402:-1:exon

LOC124467667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124467667
product: gamma-aminobutyric acid receptor subunit alpha-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047020005.1
SIO_010081: LOC124467667
subclass of: SO_0000673
so part of: LOC124467667
location: complement(join(246097..246666,247263..247465,250016..250168,253878..254021,254355..254437,255365..255585,257444..257511,265353..265468,266543..266627,267134..267402))
location: region:246097-267402:-1
so has part: feature:267134-267402:-1:exon
so has part: feature:266543-266627:-1:exon
so has part: feature:265353-265468:-1:exon
so has part: feature:257444-257511:-1:exon
so has part: feature:255365-255585:-1:exon
so has part: feature:254355-254437:-1:exon
so has part: feature:253878-254021:-1:exon
so has part: feature:250016-250168:-1:exon
so has part: feature:247263-247465:-1:exon
so has part: feature:246097-246666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267134-267402:-1:exon

position:267134:-1
position: 267134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266543-266627:-1:exon

position:266543:-1
position: 266543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266627:-1
position: 266627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265353-265468:-1:exon

position:265353:-1
position: 265353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265468:-1
position: 265468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257444-257511:-1:exon

position:257444:-1
position: 257444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257511:-1
position: 257511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255365-255585:-1:exon

position:255365:-1
position: 255365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255585:-1
position: 255585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254355-254437:-1:exon

position:254355:-1
position: 254355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254437:-1
position: 254437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253878-254021:-1:exon

position:253878:-1
position: 253878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254021:-1
position: 254021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250016-250168:-1:exon

position:250016:-1
position: 250016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250168:-1
position: 250168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:247263-247465:-1:exon

position:247263:-1
position: 247263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247465:-1
position: 247465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:246097-246666:-1:exon

position:246666:-1
position: 246666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124467667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124467667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit alpha-2
translation: MRNRESGFPYLIICFMLMILWKTRSVSADAATNAFKTNITLFTRILDRLLDGYDNRLRPGLGDRVTEVTTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFGSYAYTMSEVTYAWTYNASSSVVVEEESSRLNQYDLVGKTAGQETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKEKASVVKKNNAYAVAVANYAPNITKDSGLPTIAKGGVSDPGKTKVEGKAADSKKTFNSVSKIDRMSRIMFPVLFGSFNLVYWATYLNREPVIKDMVPSN
SIO_010081: LOC124467667
subclass of: SO_0000673
so part of: LOC124467667
location: complement(join(246361..246666,247263..247465,250016..250168,253878..254021,254355..254437,255365..255585,257444..257511,265353..265468,266543..266613))
location: region:246361-266613:-1
so has part: feature:266543-266613:-1:exon
so has part: feature:265353-265468:-1:exon
so has part: feature:257444-257511:-1:exon
so has part: feature:255365-255585:-1:exon
so has part: feature:254355-254437:-1:exon
so has part: feature:253878-254021:-1:exon
so has part: feature:250016-250168:-1:exon
so has part: feature:247263-247465:-1:exon
so has part: feature:246361-246666:-1:exon

XP_046875961.1
type: Protein
SIO_000068: ncbiprotein

position:246361:-1
position: 246361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266613:-1
position: 266613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266543-266613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265353-265468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257444-257511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255365-255585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254355-254437:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253878-254021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250016-250168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247263-247465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246361-246666:-1:exon

gabra4
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gabra4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279979..291626)
location: region:279979-291626:-1
so has part: feature:279979-291626:-1:exon
subclass of: SO_0000010

124470324
type: Gene
SIO_000068: ncbigene

position:279979:-1
position: 279979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291626:-1
position: 291626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279979-291626:-1:exon

gabra4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gabra4
product: gamma-aminobutyric acid type A receptor subunit alpha4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 117 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047024167.1
SIO_010081: gabra4
subclass of: SO_0000673
so part of: gabra4
location: complement(join(279979..280485,282151..282407,285602..285754,286142..286285,288809..288891,289075..289295,289417..289484,290891..291009,291215..291626))
location: region:279979-291626:-1
so has part: feature:291215-291626:-1:exon
so has part: feature:290891-291009:-1:exon
so has part: feature:289417-289484:-1:exon
so has part: feature:289075-289295:-1:exon
so has part: feature:288809-288891:-1:exon
so has part: feature:286142-286285:-1:exon
so has part: feature:285602-285754:-1:exon
so has part: feature:282151-282407:-1:exon
so has part: feature:279979-280485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291215-291626:-1:exon

position:291215:-1
position: 291215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290891-291009:-1:exon

position:290891:-1
position: 290891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291009:-1
position: 291009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289417-289484:-1:exon

position:289417:-1
position: 289417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289484:-1
position: 289484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289075-289295:-1:exon

position:289075:-1
position: 289075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289295:-1
position: 289295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288809-288891:-1:exon

position:288809:-1
position: 288809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288891:-1
position: 288891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286142-286285:-1:exon

position:286142:-1
position: 286142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286285:-1
position: 286285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285602-285754:-1:exon

position:285602:-1
position: 285602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285754:-1
position: 285754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:282151-282407:-1:exon

position:282151:-1
position: 282151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282407:-1
position: 282407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:279979-280485:-1:exon

position:280485:-1
position: 280485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gabra4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gabra4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit alpha-4
translation: MVSAKKEMWTAMHPSYIWTVFYLLCWSACIRRITGQVKKDERIYPENFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILRLNNLMVTKVWTPDTFFRNGKKSVAHNITAPNKLFRIMKNGTILYTMRLTIIAQCPMKLVDFPMDGHACPLKFGSYAYPKTEIIYTWTKGPEHSVEVPPESSSLVQYDLIGQTVSSETVKSITGEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQLERAKRRPGRCPPAPQTTPVKARDTEEVLQRNLDTNGHLRKRMTSTSQDPHAGVTKQPHASSQSCSTTVMTGSSSSLSCSSPKSTSQSNAASSTLTVKNLPPAPPSTPAVPGDTPSRESTGSSSLQNLLGPKLEHIHTMGNKMEPKQSPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMVYWVVYLSKETMETKVG
SIO_010081: gabra4
subclass of: SO_0000673
so part of: gabra4
location: complement(join(279979..280485,282151..282407,285602..285754,286142..286285,288809..288891,289075..289295,289417..289484,290891..291009,291215..291300))
location: region:279979-291300:-1
so has part: feature:291215-291300:-1:exon
so has part: feature:290891-291009:-1:exon
so has part: feature:289417-289484:-1:exon
so has part: feature:289075-289295:-1:exon
so has part: feature:288809-288891:-1:exon
so has part: feature:286142-286285:-1:exon
so has part: feature:285602-285754:-1:exon
so has part: feature:282151-282407:-1:exon
so has part: feature:279979-280485:-1:exon

XP_046880123.1
type: Protein
SIO_000068: ncbiprotein

position:291300:-1
position: 291300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291215-291300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290891-291009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289417-289484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289075-289295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288809-288891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286142-286285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285602-285754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282151-282407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279979-280485:-1:exon

ap1ar
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307934..314226
location: region:307934-314226:1
so has part: feature:307934-314226:1:exon
subclass of: SO_0000010

124468851
type: Gene
SIO_000068: ncbigene

position:307934:1
position: 307934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314226:1
position: 314226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307934-314226:1:exon

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021881.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307934..308362,309126..309174,309269..309295,309383..309408,309662..309758,310503..310567,310666..310742,311022..311144,311421..314226)
location: region:307934-314226:1
so has part: feature:307934-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307934-308362:1:exon

position:308362:1
position: 308362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

position:309126:1
position: 309126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309174:1
position: 309174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

position:309269:1
position: 309269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309295:1
position: 309295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

position:309383:1
position: 309383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309408:1
position: 309408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

position:309662:1
position: 309662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309758:1
position: 309758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310567:1:exon

position:310503:1
position: 310503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310567:1
position: 310567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310666-310742:1:exon

position:310666:1
position: 310666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310742:1
position: 310742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311022-311144:1:exon

position:311022:1
position: 311022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311144:1
position: 311144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:311421-314226:1:exon

position:311421:1
position: 311421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021890.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307934..308362,309126..309174,309269..309295,309383..309408,309662..309758,310503..310567,310669..310742,311022..311144,311421..314226)
location: region:307934-314226:1
so has part: feature:307934-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310669-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307934-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310669-310742:1:exon

position:310669:1
position: 310669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311421-314226:1:exon

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021870.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307935..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310669..310742,311022..311144,311421..314226)
location: region:307935-314226:1
so has part: feature:307935-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310669-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

position:307935:1
position: 307935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307935-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310047-310145:1:exon

position:310047:1
position: 310047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310145:1
position: 310145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310669-310742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311421-314226:1:exon

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021853.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307935..308114,308253..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..314226)
location: region:307935-314226:1
so has part: feature:307935-308114:1:exon
so has part: feature:308253-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307935-308114:1:exon

position:308114:1
position: 308114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308253-308362:1:exon

position:308253:1
position: 308253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311421-314226:1:exon

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021844.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307955..307998,308190..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..314226)
location: region:307955-314226:1
so has part: feature:307955-307998:1:exon
so has part: feature:308190-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

position:307955:1
position: 307955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307955-307998:1:exon

position:307998:1
position: 307998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308190-308362:1:exon

position:308190:1
position: 308190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311421-314226:1:exon

ap1ar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ap1ar
product: adaptor related protein complex 1 associated regulatory protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021862.1
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(307982..307998,308253..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..314226)
location: region:307982-314226:1
so has part: feature:307982-307998:1:exon
so has part: feature:308253-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-314226:1:exon

position:307982:1
position: 307982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307982-307998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308253-308362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311421-314226:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X1
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAELEAEEERLRLDEEARNAAQRQAARVARERRLLEEQHVLRTKGRPDGESRAGLHKNRHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877800.1
type: Protein
SIO_000068: ncbiprotein

position:308292:1
position: 308292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311755:1
position: 311755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311421-311755:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X1
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAELEAEEERLRLDEEARNAAQRQAARVARERRLLEEQHVLRTKGRPDGESRAGLHKNRHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311421-311755:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X1
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAELEAEEERLRLDEEARNAAQRQAARVARERRLLEEQHVLRTKGRPDGESRAGLHKNRHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310666..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311421-311755:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X2
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAELEAEEERLRLDEEARNAAQRQAARVARERRLLEEQHVLRTKGRPDGESRAGLHKKHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310047..310145,310503..310567,310669..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310047-310145:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310669-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310047-310145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310669-310742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311421-311755:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X3
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAEEQHVLRTKGRPDGESRAGLHKNRHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310503..310567,310666..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310666-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310666-310742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311421-311755:1:exon

ap1ar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ap1ar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex-associated regulatory protein isoform X4
translation: MGNCWGYCTGIFRREANRIQRGGGSKYFRSSTTGEHYTIEFENLVESDEVESPQSCPRPINEEEINHLKEHRYTAISDQQTLIDLKLQAEEQHVLRTKGRPDGESRAGLHKKHTPGEDFGVYLQNVKAQSEAFRGSRLPSETTVVTPNTESSWDFTTKTRSTNDDGTSLDLEWEDEEGMTRVGPAWERSRTEEDILRAALRPGPAPLASGPASASEDSNALEWENDFVSALTDEVDESEYEGFVNPVLETPSDTPGDTPGDTPGDTLSSDTPPGDIPEDATLSDTQDR
SIO_010081: ap1ar
subclass of: SO_0000673
so part of: ap1ar
location: join(308292..308362,309126..309174,309269..309295,309383..309408,309662..309758,310503..310567,310669..310742,311022..311144,311421..311755)
location: region:308292-311755:1
so has part: feature:308292-308362:1:exon
so has part: feature:309126-309174:1:exon
so has part: feature:309269-309295:1:exon
so has part: feature:309383-309408:1:exon
so has part: feature:309662-309758:1:exon
so has part: feature:310503-310567:1:exon
so has part: feature:310669-310742:1:exon
so has part: feature:311022-311144:1:exon
so has part: feature:311421-311755:1:exon

XP_046877846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308292-308362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309126-309174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309269-309295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309383-309408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309662-309758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310669-310742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311022-311144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311421-311755:1:exon

LOC124470344
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124470344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576053..638981)
location: region:576053-638981:-1
so has part: feature:576053-638981:-1:exon
subclass of: SO_0000010

124470344
type: Gene
SIO_000068: ncbigene

position:576053:-1
position: 576053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638981:-1
position: 638981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576053-638981:-1:exon

LOC124470344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124470344
product: uncharacterized LOC124470344
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047024189.1
SIO_010081: LOC124470344
subclass of: SO_0000673
so part of: LOC124470344
location: complement(join(576053..577808,585308..585424,638699..638981))
location: region:576053-638981:-1
so has part: feature:638699-638981:-1:exon
so has part: feature:585308-585424:-1:exon
so has part: feature:576053-577808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638699-638981:-1:exon

position:638699:-1
position: 638699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585308-585424:-1:exon

position:585308:-1
position: 585308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585424:-1
position: 585424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576053-577808:-1:exon

position:577808:-1
position: 577808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124470344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124470344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC124470344
translation: MSRTIALIFTPPLSLSLHQSQLPHRRVTFSTANQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENGLLSYHHITMAHPGLLSSHHITMAHPGLLSSHHITMAHPDLRPLPDVAMTGNCTHECTEYGHSDACWMPGQPSPNRKASKPPGTLSTFVPYQEREAPEQLANGSPKPGPVEERGGGGSGGGGSKGSGLRFLPPYNSAYSGASDSGRDCTLEEIPMSQASEYHPATTPPNQGSKREIYL
SIO_010081: LOC124470344
subclass of: SO_0000673
so part of: LOC124470344
location: complement(join(577390..577808,585308..585424,638699..638981))
location: region:577390-638981:-1
so has part: feature:638699-638981:-1:exon
so has part: feature:585308-585424:-1:exon
so has part: feature:577390-577808:-1:exon

XP_046880145.1
type: Protein
SIO_000068: ncbiprotein

position:577390:-1
position: 577390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638699-638981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585308-585424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577390-577808:-1:exon

tmem33
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: tmem33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683074..687093
location: region:683074-687093:1
so has part: feature:683074-687093:1:exon
subclass of: SO_0000010

124466907
type: Gene
SIO_000068: ncbigene

position:683074:1
position: 683074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687093:1
position: 687093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683074-687093:1:exon

tmem33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: tmem33
product: transmembrane protein 33
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047018870.1
SIO_010081: tmem33
subclass of: SO_0000673
so part of: tmem33
location: join(683074..683208,684033..684103,684201..684295,684709..684896,685245..685312,685419..685552,685706..685789,686006..686129,686216..687093)
location: region:683074-687093:1
so has part: feature:683074-683208:1:exon
so has part: feature:684033-684103:1:exon
so has part: feature:684201-684295:1:exon
so has part: feature:684709-684896:1:exon
so has part: feature:685245-685312:1:exon
so has part: feature:685419-685552:1:exon
so has part: feature:685706-685789:1:exon
so has part: feature:686006-686129:1:exon
so has part: feature:686216-687093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683074-683208:1:exon

position:683208:1
position: 683208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684033-684103:1:exon

position:684033:1
position: 684033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684103:1
position: 684103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684201-684295:1:exon

position:684201:1
position: 684201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684295:1
position: 684295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:684709-684896:1:exon

position:684709:1
position: 684709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684896:1
position: 684896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685245-685312:1:exon

position:685245:1
position: 685245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685312:1
position: 685312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685419-685552:1:exon

position:685419:1
position: 685419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685552:1
position: 685552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685706-685789:1:exon

position:685706:1
position: 685706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685789:1
position: 685789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:686006-686129:1:exon

position:686006:1
position: 686006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686129:1
position: 686129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:686216-687093:1:exon

position:686216:1
position: 686216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: tmem33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 33
translation: MADTEQTTPPPQLGPVQYMLANKLETAMWLSRVFTVYCSIMFILPLLGPQAAANFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALQEDSCHYLLYSLILVNSYPITMSIFPVFLFSLLHATTYTKKVLDAMGPNSLAFVRNFLDKLTANQQNILKFTACNEIFLMPATVFMLLSGQGSLLQPFIYYRFLTLRYTSRRNPYCRTLFTELRILIEHLIMKPVCPAFFRRMCLNSIAFISRLAPTEVRFVPAALYIQ
SIO_010081: tmem33
subclass of: SO_0000673
so part of: tmem33
location: join(684056..684103,684201..684295,684709..684896,685245..685312,685419..685552,685706..685789,686006..686129,686216..686251)
location: region:684056-686251:1
so has part: feature:684056-684103:1:exon
so has part: feature:684201-684295:1:exon
so has part: feature:684709-684896:1:exon
so has part: feature:685245-685312:1:exon
so has part: feature:685419-685552:1:exon
so has part: feature:685706-685789:1:exon
so has part: feature:686006-686129:1:exon
so has part: feature:686216-686251:1:exon

XP_046874826.1
type: Protein
SIO_000068: ncbiprotein

position:684056:1
position: 684056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686251:1
position: 686251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684056-684103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684201-684295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684709-684896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685245-685312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685419-685552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685706-685789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686006-686129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:686216-686251:1:exon

LOC124469637
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124469637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704275..715273)
location: region:704275-715273:-1
so has part: feature:704275-715273:-1:exon
subclass of: SO_0000010

124469637
type: Gene
SIO_000068: ncbigene

position:704275:-1
position: 704275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715273:-1
position: 715273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704275-715273:-1:exon

LOC124469637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124469637
product: diacylglycerol kinase theta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_047023055.1
SIO_010081: LOC124469637
subclass of: SO_0000673
so part of: LOC124469637
location: complement(join(704275..704445,704572..704724,705247..705358,705472..705618,705732..705832,705992..706170,706320..706468,706674..706825,707050..707165,707564..707602,707830..707980,708226..708287,708410..708464,708597..708687,708813..709027,709272..709372,709511..709585,709903..710056,710398..710523,711387..711472,712379..712478,712716..712795,714484..715273))
location: region:704275-715273:-1
so has part: feature:714484-715273:-1:exon
so has part: feature:712716-712795:-1:exon
so has part: feature:712379-712478:-1:exon
so has part: feature:711387-711472:-1:exon
so has part: feature:710398-710523:-1:exon
so has part: feature:709903-710056:-1:exon
so has part: feature:709511-709585:-1:exon
so has part: feature:709272-709372:-1:exon
so has part: feature:708813-709027:-1:exon
so has part: feature:708597-708687:-1:exon
so has part: feature:708410-708464:-1:exon
so has part: feature:708226-708287:-1:exon
so has part: feature:707830-707980:-1:exon
so has part: feature:707564-707602:-1:exon
so has part: feature:707050-707165:-1:exon
so has part: feature:706674-706825:-1:exon
so has part: feature:706320-706468:-1:exon
so has part: feature:705992-706170:-1:exon
so has part: feature:705732-705832:-1:exon
so has part: feature:705472-705618:-1:exon
so has part: feature:705247-705358:-1:exon
so has part: feature:704572-704724:-1:exon
so has part: feature:704275-704445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714484-715273:-1:exon

position:714484:-1
position: 714484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712716-712795:-1:exon

position:712716:-1
position: 712716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712795:-1
position: 712795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712379-712478:-1:exon

position:712379:-1
position: 712379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712478:-1
position: 712478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711387-711472:-1:exon

position:711387:-1
position: 711387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711472:-1
position: 711472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710398-710523:-1:exon

position:710398:-1
position: 710398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710523:-1
position: 710523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:709903-710056:-1:exon

position:709903:-1
position: 709903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710056:-1
position: 710056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:709511-709585:-1:exon

position:709511:-1
position: 709511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709585:-1
position: 709585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:709272-709372:-1:exon

position:709272:-1
position: 709272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709372:-1
position: 709372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:708813-709027:-1:exon

position:708813:-1
position: 708813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709027:-1
position: 709027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:708597-708687:-1:exon

position:708597:-1
position: 708597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708687:-1
position: 708687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:708410-708464:-1:exon

position:708410:-1
position: 708410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708464:-1
position: 708464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:708226-708287:-1:exon

position:708226:-1
position: 708226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708287:-1
position: 708287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:707830-707980:-1:exon

position:707830:-1
position: 707830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707980:-1
position: 707980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:707564-707602:-1:exon

position:707564:-1
position: 707564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707602:-1
position: 707602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:707050-707165:-1:exon

position:707050:-1
position: 707050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707165:-1
position: 707165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:706674-706825:-1:exon

position:706674:-1
position: 706674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706825:-1
position: 706825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:706320-706468:-1:exon

position:706320:-1
position: 706320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706468:-1
position: 706468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:705992-706170:-1:exon

position:705992:-1
position: 705992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706170:-1
position: 706170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:705732-705832:-1:exon

position:705732:-1
position: 705732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705832:-1
position: 705832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:705472-705618:-1:exon

position:705472:-1
position: 705472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705618:-1
position: 705618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:705247-705358:-1:exon

position:705247:-1
position: 705247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705358:-1
position: 705358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:704572-704724:-1:exon

position:704572:-1
position: 704572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704724:-1
position: 704724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:704275-704445:-1:exon

position:704445:-1
position: 704445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124469637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124469637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diacylglycerol kinase theta
translation: MAESARVKNVSTDSPCASPRSGGKKAQQSPGSRSKYQVSAPGHCFKRVTLTKPTFCHNCSDFIWGIVGFLCEVCNFMCHEKCLKTLRTVCSCLAPTLVQLPVAHCFGPAGQKKRFCCVCRKHLEGNTALRCEVCELHVHTDCAMFSCGDCRVCHQDGTQDRDVFHHHWREGNIPSGARCEVCRRTCGSSDVLAGMKCEWCGMTAHAACYVIVPPVCDLGRLAGVLLRPACVQLSSRNFSKMHCYRISESCQNELDHFDEVDSIMSAPAKESQPASTPDSGKQVLKVSDGDDAIKRGFFRLVSIPRITKNEEVLESALRAFYLPDEPKDYDLHEYGQAPLQSDDILNRNGNPDNKSIFKDCVPEAWVLRARPQDTEGLNIYAGWQKVGAPYVSISISKNSTVDSVIQEVLIRLEKQAEDPSNFNLIEVYMGSRQVQRQVLTGQEMLLDKLQEIRKVSLRQMNQTRFYVAESRTRSVQVQLLIGGLPPLLNKDQYSHLLQEHLAVKRHLIATTHVYGSQGALVLQISCFSEAERVYMLAKDTSVCNKQLTSLVIPQILHNKLERGCCPLLVFVNPRSGGLRGRELLYSFRKLLNPHQVFDLTNGGPLAGLHTFREVPHFRVLVCGGDGTVGWVLGVLEAVRHKLVCPEPPIAIIPLGTGNDLARVLRWGAGYSGEDPQNVLQAVDEAEEVQMDRWTILLDAQEMSGGGEENGYLEPPKIVQMNNYFGLGIDAELTLDFHHAREEEPEKFNSRFHNKGVYVKAGLQKLSHTRNLHQDIRLQVDKHEVELPSIEGLIFLNIPSWGSGADLWGSEGDGRFGRPRIDDGMLEVVGVTGVVHMGQVQSGLRSGIRIAQGNYVRVTVTKPLPVQVDGEPWIQAPGHIIISAAGPKVRMLRKSKHKQKRSAGLREARSESPSSSDGGQ
SIO_010081: LOC124469637
subclass of: SO_0000673
so part of: LOC124469637
location: complement(join(704347..704445,704572..704724,705247..705358,705472..705618,705732..705832,705992..706170,706320..706468,706674..706825,707050..707165,707564..707602,707830..707980,708226..708287,708410..708464,708597..708687,708813..709027,709272..709372,709511..709585,709903..710056,710398..710523,711387..711472,712379..712478,712716..712795,714484..714700))
location: region:704347-714700:-1
so has part: feature:714484-714700:-1:exon
so has part: feature:712716-712795:-1:exon
so has part: feature:712379-712478:-1:exon
so has part: feature:711387-711472:-1:exon
so has part: feature:710398-710523:-1:exon
so has part: feature:709903-710056:-1:exon
so has part: feature:709511-709585:-1:exon
so has part: feature:709272-709372:-1:exon
so has part: feature:708813-709027:-1:exon
so has part: feature:708597-708687:-1:exon
so has part: feature:708410-708464:-1:exon
so has part: feature:708226-708287:-1:exon
so has part: feature:707830-707980:-1:exon
so has part: feature:707564-707602:-1:exon
so has part: feature:707050-707165:-1:exon
so has part: feature:706674-706825:-1:exon
so has part: feature:706320-706468:-1:exon
so has part: feature:705992-706170:-1:exon
so has part: feature:705732-705832:-1:exon
so has part: feature:705472-705618:-1:exon
so has part: feature:705247-705358:-1:exon
so has part: feature:704572-704724:-1:exon
so has part: feature:704347-704445:-1:exon

XP_046879011.1
type: Protein
SIO_000068: ncbiprotein

position:704347:-1
position: 704347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714700:-1
position: 714700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714484-714700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712716-712795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712379-712478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711387-711472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710398-710523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:709903-710056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:709511-709585:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:709272-709372:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708813-709027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708597-708687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708410-708464:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:708226-708287:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:707830-707980:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:707564-707602:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707050-707165:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:706674-706825:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:706320-706468:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:705992-706170:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:705732-705832:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:705472-705618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:705247-705358:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:704572-704724:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:704347-704445:-1:exon

LOC124467594
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124467594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 718647..721534
location: region:718647-721534:1
so has part: feature:718647-721534:1:exon
subclass of: SO_0000010

124467594
type: Gene
SIO_000068: ncbigene

position:718647:1
position: 718647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721534:1
position: 721534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718647-721534:1:exon

LOC124467594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124467594
product: eukaryotic translation initiation factor 4E-1A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047019924.1
SIO_010081: LOC124467594
subclass of: SO_0000673
so part of: LOC124467594
location: join(718647..718717,719270..719376,719572..719667,719904..719967,720393..720506,720646..720785,721074..721534)
location: region:718647-721534:1
so has part: feature:718647-718717:1:exon
so has part: feature:719270-719376:1:exon
so has part: feature:719572-719667:1:exon
so has part: feature:719904-719967:1:exon
so has part: feature:720393-720506:1:exon
so has part: feature:720646-720785:1:exon
so has part: feature:721074-721534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718647-718717:1:exon

position:718717:1
position: 718717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719270-719376:1:exon

position:719270:1
position: 719270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719376:1
position: 719376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719572-719667:1:exon

position:719572:1
position: 719572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719667:1
position: 719667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719904-719967:1:exon

position:719904:1
position: 719904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719967:1
position: 719967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:720393-720506:1:exon

position:720393:1
position: 720393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720506:1
position: 720506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:720646-720785:1:exon

position:720646:1
position: 720646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720785:1
position: 720785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:721074-721534:1:exon

position:721074:1
position: 721074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124467594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124467594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E-1A
translation: MATAEPESTPKQSNSDEEEKCETTGKEIASPEDYIKHPLQNKWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLISGCDYSLFKDGIEPMWEDERNKRGGRWLITLSKQQRRADLDRFWLETLLCLVGEAFDDHSDDVCGAVVNIRTKGDKIAIWTTDYDNKDGITHIGRVYKERLGVPSKVVIGYQSHADTATKSGSSTKNKFVV
SIO_010081: LOC124467594
subclass of: SO_0000673
so part of: LOC124467594
location: join(718700..718717,719270..719376,719572..719667,719904..719967,720393..720506,720646..720785,721074..721188)
location: region:718700-721188:1
so has part: feature:718700-718717:1:exon
so has part: feature:719270-719376:1:exon
so has part: feature:719572-719667:1:exon
so has part: feature:719904-719967:1:exon
so has part: feature:720393-720506:1:exon
so has part: feature:720646-720785:1:exon
so has part: feature:721074-721188:1:exon

XP_046875880.1
type: Protein
SIO_000068: ncbiprotein

position:718700:1
position: 718700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721188:1
position: 721188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718700-718717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719270-719376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719572-719667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719904-719967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720393-720506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720646-720785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721074-721188:1:exon

lingo2
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: lingo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 812876..972325
location: region:812876-972325:1
so has part: feature:812876-972325:1:exon
subclass of: SO_0000010

124471078
type: Gene
SIO_000068: ncbigene

position:812876:1
position: 812876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972325:1
position: 972325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812876-972325:1:exon

lingo2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: lingo2
product: leucine rich repeat and Ig domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_047025409.1
SIO_010081: lingo2
subclass of: SO_0000673
so part of: lingo2
location: join(812876..813366,847344..847416,869742..869841,903701..903782,969346..972325)
location: region:812876-972325:1
so has part: feature:812876-813366:1:exon
so has part: feature:847344-847416:1:exon
so has part: feature:869742-869841:1:exon
so has part: feature:903701-903782:1:exon
so has part: feature:969346-972325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812876-813366:1:exon

position:813366:1
position: 813366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:847344-847416:1:exon

position:847344:1
position: 847344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847416:1
position: 847416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869742-869841:1:exon

position:869742:1
position: 869742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869841:1
position: 869841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:903701-903782:1:exon

position:903701:1
position: 903701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903782:1
position: 903782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969346-972325:1:exon

position:969346:1
position: 969346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lingo2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: lingo2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
translation: MVDCMSKVMLHTALSCWQPFLGLALLAVFVSSALGCPARCDCSAQSKAVLCHRKRLPGIPDGIPIETRILDLSKNKLQAINPDDFAAFPGLEDLDLSGNIISYVEPGAFNALFSMHSLSLKSNRIKLIPLGVFTGLSNLTRLDISDNKIVILLDYMFQDLHNLKYLEVGDNDLVYISHRAFSGLFGLERLTLERCNLTVVPTEALSHLHNLVSLHLRHLSISTLHPFSFKKLFRLQHLEIDHWLSLDLVPANTLHGLNLTTLYITNTNLSSFPYQALRHLPYLTHLNLSYNRIRHIEGGLLNDLVRLQELHLVGAQLSTVEPYAFQGLRWLRVLNVSHNHLDTLERGVFQAPEALQALLIDDNPLVCDCRLMWILQKRHSIAFGEAQPECSNPEGIRGRPFKEFKETLLSYYMTCTKPKIRENKTQAVTVDEGQPAKLYCSAEGTPRPAVSWLSPRRRHLTNKSHGRVTVHNNGTLEIKAAEVHDGGVYLCMASNSAGNDSLMVSLAVKSLGSLYANRTQYYTDPSNTTANGTANVTFGLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTNVDSAEVQAGPRHFNMKMI
SIO_010081: lingo2
subclass of: SO_0000673
so part of: lingo2
location: 969358..971199
location: region:969358-971199:1
so has part: feature:969358-971199:1:exon

XP_046881365.1
type: Protein
SIO_000068: ncbiprotein

position:969358:1
position: 969358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971199:1
position: 971199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969358-971199:1:exon

adh5
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: adh5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1020923..1025186)
location: region:1020923-1025186:-1
so has part: feature:1020923-1025186:-1:exon
subclass of: SO_0000010

124468026
type: Gene
SIO_000068: ncbigene

position:1020923:-1
position: 1020923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025186:-1
position: 1025186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020923-1025186:-1:exon

adh5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: adh5
product: alcohol dehydrogenase 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047020586.1
SIO_010081: adh5
subclass of: SO_0000673
so part of: adh5
location: complement(join(1020923..1021115,1021209..1021347,1021634..1021769,1021985..1022245,1023110..1023329,1023476..1023563,1023673..1023814,1024510..1024611,1025113..1025186))
location: region:1020923-1025186:-1
so has part: feature:1025113-1025186:-1:exon
so has part: feature:1024510-1024611:-1:exon
so has part: feature:1023673-1023814:-1:exon
so has part: feature:1023476-1023563:-1:exon
so has part: feature:1023110-1023329:-1:exon
so has part: feature:1021985-1022245:-1:exon
so has part: feature:1021634-1021769:-1:exon
so has part: feature:1021209-1021347:-1:exon
so has part: feature:1020923-1021115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025113-1025186:-1:exon

position:1025113:-1
position: 1025113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024510-1024611:-1:exon

position:1024510:-1
position: 1024510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024611:-1
position: 1024611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023673-1023814:-1:exon

position:1023673:-1
position: 1023673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023814:-1
position: 1023814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1023476-1023563:-1:exon

position:1023476:-1
position: 1023476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023563:-1
position: 1023563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023110-1023329:-1:exon

position:1023110:-1
position: 1023110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023329:-1
position: 1023329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1021985-1022245:-1:exon

position:1021985:-1
position: 1021985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022245:-1
position: 1022245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1021634-1021769:-1:exon

position:1021634:-1
position: 1021634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021769:-1
position: 1021769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1021209-1021347:-1:exon

position:1021209:-1
position: 1021209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021347:-1
position: 1021347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1020923-1021115:-1:exon

position:1021115:-1
position: 1021115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adh5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: adh5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alcohol dehydrogenase class-3
translation: METAGKVIKCKAAVAWEVGKPLSIEEVEVAPPKSHEIRIKIFATGVCHTDSYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDAVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLMPDGTSRFSCKGKQLFHFMGCSSFSEYTVVADISVAKVDQKAPLDKVCLLGCGISTGYGAALNTAKVEPGSICAVFGLGAVGMAVIMGCQVAGATRIIGVDIDPNKFEKAKEFGATEFVNPKDHSRPIQEVLVEMTDGGVDYSFECIGNVGLMRAALEACHKGWGESVIIGVAAAGQEISTRPFQLVTGRVWRGTAFGGWKSVESVPKLVEDYMKKKLKVDEFVSHNLPFEQINEAFDLMHSGTSIRTVLKF
SIO_010081: adh5
subclass of: SO_0000673
so part of: adh5
location: complement(join(1021091..1021115,1021209..1021347,1021634..1021769,1021985..1022245,1023110..1023329,1023476..1023563,1023673..1023814,1024510..1024611,1025113..1025130))
location: region:1021091-1025130:-1
so has part: feature:1025113-1025130:-1:exon
so has part: feature:1024510-1024611:-1:exon
so has part: feature:1023673-1023814:-1:exon
so has part: feature:1023476-1023563:-1:exon
so has part: feature:1023110-1023329:-1:exon
so has part: feature:1021985-1022245:-1:exon
so has part: feature:1021634-1021769:-1:exon
so has part: feature:1021209-1021347:-1:exon
so has part: feature:1021091-1021115:-1:exon

XP_046876542.1
type: Protein
SIO_000068: ncbiprotein

position:1021091:-1
position: 1021091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025130:-1
position: 1025130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025113-1025130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1024510-1024611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023673-1023814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023476-1023563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023110-1023329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021985-1022245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021634-1021769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021209-1021347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021091-1021115:-1:exon

gar1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1025805..1028258)
location: region:1025805-1028258:-1
so has part: feature:1025805-1028258:-1:exon
subclass of: SO_0000010

124468036
type: Gene
SIO_000068: ncbigene

position:1025805:-1
position: 1025805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028258:-1
position: 1028258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025805-1028258:-1:exon

gar1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gar1
product: GAR1 homolog, ribonucleoprotein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047020598.1
SIO_010081: gar1
subclass of: SO_0000673
so part of: gar1
location: complement(join(1025805..1026344,1026481..1026606,1026734..1026857,1026965..1027024,1027139..1027293,1027404..1027607,1028181..1028258))
location: region:1025805-1028258:-1
so has part: feature:1028181-1028258:-1:exon
so has part: feature:1027404-1027607:-1:exon
so has part: feature:1027139-1027293:-1:exon
so has part: feature:1026965-1027024:-1:exon
so has part: feature:1026734-1026857:-1:exon
so has part: feature:1026481-1026606:-1:exon
so has part: feature:1025805-1026344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028181-1028258:-1:exon

position:1028181:-1
position: 1028181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027404-1027607:-1:exon

position:1027404:-1
position: 1027404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027607:-1
position: 1027607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027139-1027293:-1:exon

position:1027139:-1
position: 1027139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027293:-1
position: 1027293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1026965-1027024:-1:exon

position:1026965:-1
position: 1026965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027024:-1
position: 1027024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026734-1026857:-1:exon

position:1026734:-1
position: 1026734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026857:-1
position: 1026857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1026481-1026606:-1:exon

position:1026481:-1
position: 1026481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026606:-1
position: 1026606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1025805-1026344:-1:exon

position:1026344:-1
position: 1026344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gar1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gar1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit 1
translation: MSFRGGGGRGGRGGGGGFNRGGGGRGGGGYGGGFGGRGGGGGFRGGGRGGFRQQDYGPPEYVVALGEFVHPCEDDIVCKCVTEENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFYFSVKLSDNMKASSFKKLQKFYIDPMKLLPLQRFLPRPPGEKGPPRGGRGGRGGGRGGGRGGGFRGGRGGGGFGGGGFGGRGGGGRGGGFRGGSRGGGGRGFRGGR
SIO_010081: gar1
subclass of: SO_0000673
so part of: gar1
location: complement(join(1026334..1026344,1026481..1026606,1026734..1026857,1026965..1027024,1027139..1027293,1027404..1027593))
location: region:1026334-1027593:-1
so has part: feature:1027404-1027593:-1:exon
so has part: feature:1027139-1027293:-1:exon
so has part: feature:1026965-1027024:-1:exon
so has part: feature:1026734-1026857:-1:exon
so has part: feature:1026481-1026606:-1:exon
so has part: feature:1026334-1026344:-1:exon

XP_046876554.1
type: Protein
SIO_000068: ncbiprotein

position:1026334:-1
position: 1026334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027593:-1
position: 1027593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027404-1027593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027139-1027293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026965-1027024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026734-1026857:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026481-1026606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026334-1026344:-1:exon

LOC124468016
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124468016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1028313..1033002
location: region:1028313-1033002:1
so has part: feature:1028313-1033002:1:exon
subclass of: SO_0000010

124468016
type: Gene
SIO_000068: ncbigene

position:1028313:1
position: 1028313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033002:1
position: 1033002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028313-1033002:1:exon

LOC124468016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124468016
product: alcohol dehydrogenase class-3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047020574.1
SIO_010081: LOC124468016
subclass of: SO_0000673
so part of: LOC124468016
location: join(1028313..1028461,1028582..1028683,1029342..1029492,1029600..1029687,1029846..1030065,1030359..1030619,1031833..1031965,1032235..1032373,1032522..1033002)
location: region:1028313-1033002:1
so has part: feature:1028313-1028461:1:exon
so has part: feature:1028582-1028683:1:exon
so has part: feature:1029342-1029492:1:exon
so has part: feature:1029600-1029687:1:exon
so has part: feature:1029846-1030065:1:exon
so has part: feature:1030359-1030619:1:exon
so has part: feature:1031833-1031965:1:exon
so has part: feature:1032235-1032373:1:exon
so has part: feature:1032522-1033002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028313-1028461:1:exon

position:1028461:1
position: 1028461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028582-1028683:1:exon

position:1028582:1
position: 1028582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028683:1
position: 1028683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029342-1029492:1:exon

position:1029342:1
position: 1029342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029492:1
position: 1029492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029600-1029687:1:exon

position:1029600:1
position: 1029600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029687:1
position: 1029687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1029846-1030065:1:exon

position:1029846:1
position: 1029846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030065:1
position: 1030065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030359-1030619:1:exon

position:1030359:1
position: 1030359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030619:1
position: 1030619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1031833-1031965:1:exon

position:1031833:1
position: 1031833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031965:1
position: 1031965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1032235-1032373:1:exon

position:1032235:1
position: 1032235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032373:1
position: 1032373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1032522-1033002:1:exon

position:1032522:1
position: 1032522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124468016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124468016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alcohol dehydrogenase class-3-like
translation: MTKGQVIKCKAAVAWEPGKPLCIEDVEVAPPKDHEVRIKISASGVCHTDWAYLYEAGKGMHPRPFPLVLGHEGAGVVESIGEGVTKFSPGDKVIPLFLPQCGVCERCLSPKTNLCKKNWQNTQMGVLADGTSRISCKGQQVYQFIGVSSFCQYTVVADTSVTKIREDAPLDTVCLLGCGVSTGYGAALNTAKVEPGSTCAVIGLGAVGLATVMGCKVAGATRIIGVDINPDKFEKAKEFGATEFVNPKDHSRPIQEVLVEMTDGGVDYALECVGNVTVMRAALEATKDALGVCVIVGWTETEEMSLVVEDLLLGRTLKGTYFGGWKSVESVPKLVDDYMNKKLKLDEFVTHTVNLDQINEAFDLLTSGKSIRTVVKL
SIO_010081: LOC124468016
subclass of: SO_0000673
so part of: LOC124468016
location: join(1028447..1028461,1028582..1028683,1029342..1029492,1029600..1029687,1029846..1030065,1030359..1030619,1031833..1031965,1032235..1032373,1032522..1032546)
location: region:1028447-1032546:1
so has part: feature:1028447-1028461:1:exon
so has part: feature:1028582-1028683:1:exon
so has part: feature:1029342-1029492:1:exon
so has part: feature:1029600-1029687:1:exon
so has part: feature:1029846-1030065:1:exon
so has part: feature:1030359-1030619:1:exon
so has part: feature:1031833-1031965:1:exon
so has part: feature:1032235-1032373:1:exon
so has part: feature:1032522-1032546:1:exon

XP_046876530.1
type: Protein
SIO_000068: ncbiprotein

position:1028447:1
position: 1028447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032546:1
position: 1032546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028447-1028461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028582-1028683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029342-1029492:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029600-1029687:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1029846-1030065:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030359-1030619:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031833-1031965:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032235-1032373:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1032522-1032546:1:exon

pitx2
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: pitx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1140677..1182596
location: region:1140677-1182596:1
so has part: feature:1140677-1182596:1:exon
subclass of: SO_0000010

124469723
type: Gene
SIO_000068: ncbigene

position:1140677:1
position: 1140677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182596:1
position: 1182596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140677-1182596:1:exon

pitx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pitx2
product: paired-like homeodomain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_047023202.1
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1140677..1140692,1169945..1170013,1174735..1174931,1175996..1178135,1178330..1178378,1178496..1178649,1182268..1182596)
location: region:1140677-1182596:1
so has part: feature:1140677-1140692:1:exon
so has part: feature:1169945-1170013:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1178135:1:exon
so has part: feature:1178330-1178378:1:exon
so has part: feature:1178496-1178649:1:exon
so has part: feature:1182268-1182596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140677-1140692:1:exon

position:1140692:1
position: 1140692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169945-1170013:1:exon

position:1169945:1
position: 1169945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170013:1
position: 1170013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1174735-1174931:1:exon

position:1174735:1
position: 1174735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174931:1
position: 1174931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175996-1178135:1:exon

position:1175996:1
position: 1175996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178135:1
position: 1178135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1178330-1178378:1:exon

position:1178330:1
position: 1178330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178378:1
position: 1178378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1178496-1178649:1:exon

position:1178496:1
position: 1178496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178649:1
position: 1178649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1182268-1182596:1:exon

position:1182268:1
position: 1182268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pitx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pitx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary homeobox 2 isoform X2
translation: MQEAVFKNLIMESHCRKLASTCAQLEKEKGQSKNDDSSDDPKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSGVPTSACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1140686..1140692,1169945..1170013,1174735..1174931,1175996..1176559)
location: region:1140686-1176559:1
so has part: feature:1140686-1140692:1:exon
so has part: feature:1169945-1170013:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1176559:1:exon

XP_046879158.1
type: Protein
SIO_000068: ncbiprotein

position:1140686:1
position: 1140686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176559:1
position: 1176559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140686-1140692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1169945-1170013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174735-1174931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175996-1176559:1:exon

LOC124469740
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124469740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1158596..1181738)
location: region:1158596-1181738:-1
so has part: feature:1158596-1181738:-1:exon
subclass of: SO_0000011

124469740
type: Gene
SIO_000068: ncbigene

position:1158596:-1
position: 1158596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181738:-1
position: 1181738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158596-1181738:-1:exon

LOC124469740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 137520
nc RNA class: lncRNA
gene: LOC124469740
product: uncharacterized LOC124469740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_006956330.1
SIO_010081: LOC124469740
subclass of: SO_0000673
so part of: LOC124469740
location: complement(join(1158596..1158956,1180650..1180739,1181246..1181738))
location: region:1158596-1181738:-1
so has part: feature:1181246-1181738:-1:exon
so has part: feature:1180650-1180739:-1:exon
so has part: feature:1158596-1158956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181246-1181738:-1:exon

position:1181246:-1
position: 1181246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180650-1180739:-1:exon

position:1180650:-1
position: 1180650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180739:-1
position: 1180739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1158596-1158956:-1:exon

position:1158956:-1
position: 1158956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pitx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pitx2
product: paired-like homeodomain 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_047023210.1
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1167368..1167776,1169945..1170013,1174735..1174931,1175996..1177418)
location: region:1167368-1177418:1
so has part: feature:1167368-1167776:1:exon
so has part: feature:1169945-1170013:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1177418:1:exon

position:1167368:1
position: 1167368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177418:1
position: 1177418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167368-1167776:1:exon

position:1167776:1
position: 1167776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169945-1170013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174735-1174931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175996-1177418:1:exon

pitx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pitx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary homeobox 2 isoform X3
translation: MESHCRKLASTCAQLEKEKGQSKNDDSSDDPKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSGVPTSACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1169968..1170013,1174735..1174931,1175996..1176559)
location: region:1169968-1176559:1
so has part: feature:1169968-1170013:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1176559:1:exon

XP_046879166.1
type: Protein
SIO_000068: ncbiprotein

position:1169968:1
position: 1169968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1169968-1170013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174735-1174931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175996-1176559:1:exon

pitx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pitx2
product: paired-like homeodomain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_047023193.1
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1173207..1174079,1174735..1174931,1175996..1177412)
location: region:1173207-1177412:1
so has part: feature:1173207-1174079:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1177412:1:exon

position:1173207:1
position: 1173207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177412:1
position: 1177412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173207-1174079:1:exon

position:1174079:1
position: 1174079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174735-1174931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175996-1177412:1:exon

pitx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pitx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary homeobox 2 isoform X1
translation: MNSMRDPLNLDHHHHHLSGNKLASTHHTALAMASSLQPLQRSVDSKHRSEVHTVSDTSSPESVEKEKGQSKNDDSSDDPKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSGVPTSACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
SIO_010081: pitx2
subclass of: SO_0000673
so part of: pitx2
location: join(1173890..1174079,1174735..1174931,1175996..1176559)
location: region:1173890-1176559:1
so has part: feature:1173890-1174079:1:exon
so has part: feature:1174735-1174931:1:exon
so has part: feature:1175996-1176559:1:exon

XP_046879149.1
type: Protein
SIO_000068: ncbiprotein

position:1173890:1
position: 1173890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173890-1174079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174735-1174931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175996-1176559:1:exon

elovl6
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: elovl6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1187766..1200342
location: region:1187766-1200342:1
so has part: feature:1187766-1200342:1:exon
subclass of: SO_0000010

124469471
type: Gene
SIO_000068: ncbigene

position:1187766:1
position: 1187766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200342:1
position: 1200342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187766-1200342:1:exon

elovl6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: elovl6
product: ELOVL fatty acid elongase 6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022796.1
SIO_010081: elovl6
subclass of: SO_0000673
so part of: elovl6
location: join(1187766..1188006,1196784..1196915,1197256..1197407,1198387..1200342)
location: region:1187766-1200342:1
so has part: feature:1187766-1188006:1:exon
so has part: feature:1196784-1196915:1:exon
so has part: feature:1197256-1197407:1:exon
so has part: feature:1198387-1200342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187766-1188006:1:exon

position:1188006:1
position: 1188006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1196784-1196915:1:exon

position:1196784:1
position: 1196784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196915:1
position: 1196915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1197256-1197407:1:exon

position:1197256:1
position: 1197256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197407:1
position: 1197407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1198387-1200342:1:exon

position:1198387:1
position: 1198387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

elovl6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: elovl6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation of very long chain fatty acids protein 6
translation: MSVLALQEYEFERQFNEDEAIRWMQENWKKSFLFSALYAACILGGRHVMKQREKFELRKPLVLWSLTLAVFSIFGAVRTGSYMTYILMTKGLKQSVCDQSFYNGPVSKFWAYAFVLSKAPELGDTMFIVLRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYLVHAVMYSYYALRAAGFKVSRKFAMFITITQITQMLVGCVVNYLVYAWMQQGQECPSHVQNIVWSSLMYLSYFILFVQFFIEAYFSKTKATAAARKTQ
SIO_010081: elovl6
subclass of: SO_0000673
so part of: elovl6
location: join(1187924..1188006,1196784..1196915,1197256..1197407,1198387..1198823)
location: region:1187924-1198823:1
so has part: feature:1187924-1188006:1:exon
so has part: feature:1196784-1196915:1:exon
so has part: feature:1197256-1197407:1:exon
so has part: feature:1198387-1198823:1:exon

XP_046878752.1
type: Protein
SIO_000068: ncbiprotein

position:1187924:1
position: 1187924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198823:1
position: 1198823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187924-1188006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196784-1196915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1197256-1197407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198387-1198823:1:exon

egf
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: egf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1205249..1224765)
location: region:1205249-1224765:-1
so has part: feature:1205249-1224765:-1:exon
subclass of: SO_0000010

124470940
type: Gene
SIO_000068: ncbigene

position:1205249:-1
position: 1205249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224765:-1
position: 1224765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205249-1224765:-1:exon

egf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: egf
product: epidermal growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047025179.1
SIO_010081: egf
subclass of: SO_0000673
so part of: egf
location: complement(join(1205249..1206596,1206996..1207092,1208197..1208361,1208837..1208996,1209365..1209487,1209717..1209842,1210229..1210345,1210474..1210644,1210802..1210948,1211553..1211720,1211873..1212096,1212299..1212403,1212541..1212689,1212886..1213022,1213118..1213243,1213923..1214045,1217370..1217492,1217671..1217784,1217874..1218076,1218258..1218485,1219233..1219414,1219650..1219843,1221993..1224765))
location: region:1205249-1224765:-1
so has part: feature:1221993-1224765:-1:exon
so has part: feature:1219650-1219843:-1:exon
so has part: feature:1219233-1219414:-1:exon
so has part: feature:1218258-1218485:-1:exon
so has part: feature:1217874-1218076:-1:exon
so has part: feature:1217671-1217784:-1:exon
so has part: feature:1217370-1217492:-1:exon
so has part: feature:1213923-1214045:-1:exon
so has part: feature:1213118-1213243:-1:exon
so has part: feature:1212886-1213022:-1:exon
so has part: feature:1212541-1212689:-1:exon
so has part: feature:1212299-1212403:-1:exon
so has part: feature:1211873-1212096:-1:exon
so has part: feature:1211553-1211720:-1:exon
so has part: feature:1210802-1210948:-1:exon
so has part: feature:1210474-1210644:-1:exon
so has part: feature:1210229-1210345:-1:exon
so has part: feature:1209717-1209842:-1:exon
so has part: feature:1209365-1209487:-1:exon
so has part: feature:1208837-1208996:-1:exon
so has part: feature:1208197-1208361:-1:exon
so has part: feature:1206996-1207092:-1:exon
so has part: feature:1205249-1206596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221993-1224765:-1:exon

position:1221993:-1
position: 1221993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1219650-1219843:-1:exon

position:1219650:-1
position: 1219650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219843:-1
position: 1219843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1219233-1219414:-1:exon

position:1219233:-1
position: 1219233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219414:-1
position: 1219414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1218258-1218485:-1:exon

position:1218258:-1
position: 1218258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218485:-1
position: 1218485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1217874-1218076:-1:exon

position:1217874:-1
position: 1217874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218076:-1
position: 1218076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1217671-1217784:-1:exon

position:1217671:-1
position: 1217671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217784:-1
position: 1217784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1217370-1217492:-1:exon

position:1217370:-1
position: 1217370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217492:-1
position: 1217492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1213923-1214045:-1:exon

position:1213923:-1
position: 1213923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214045:-1
position: 1214045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1213118-1213243:-1:exon

position:1213118:-1
position: 1213118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213243:-1
position: 1213243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1212886-1213022:-1:exon

position:1212886:-1
position: 1212886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213022:-1
position: 1213022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1212541-1212689:-1:exon

position:1212541:-1
position: 1212541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212689:-1
position: 1212689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1212299-1212403:-1:exon

position:1212299:-1
position: 1212299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212403:-1
position: 1212403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1211873-1212096:-1:exon

position:1211873:-1
position: 1211873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212096:-1
position: 1212096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1211553-1211720:-1:exon

position:1211553:-1
position: 1211553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211720:-1
position: 1211720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1210802-1210948:-1:exon

position:1210802:-1
position: 1210802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210948:-1
position: 1210948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1210474-1210644:-1:exon

position:1210474:-1
position: 1210474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210644:-1
position: 1210644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1210229-1210345:-1:exon

position:1210229:-1
position: 1210229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210345:-1
position: 1210345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1209717-1209842:-1:exon

position:1209717:-1
position: 1209717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209842:-1
position: 1209842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1209365-1209487:-1:exon

position:1209365:-1
position: 1209365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209487:-1
position: 1209487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1208837-1208996:-1:exon

position:1208837:-1
position: 1208837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208996:-1
position: 1208996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1208197-1208361:-1:exon

position:1208197:-1
position: 1208197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208361:-1
position: 1208361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1206996-1207092:-1:exon

position:1206996:-1
position: 1206996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207092:-1
position: 1207092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1205249-1206596:-1:exon

position:1206596:-1
position: 1206596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

egf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: egf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-epidermal growth factor
translation: MFLATVVALLVCFFVRKAEVTEPGRECWRGSLSGVGSNWSCVEPYLIFGHGKGIYRMDLDGGNRKRLVAGVGNSILLDFNYQEGRVYWADRTTGVVYKAAMDGAQRQKLYSSEKGLSGLAVDWIQNVVFWSSEEKGTIKRMEANDKNERTVLRYLSQPCCIAIDPSDRFLFWLSDGITPSIQRSNVAGEMTTTVLKMAEKLRALSIDRTDKRLFWVQFGSEGESAIGSCDYNGNVINTISQPLRSQSLGIFVFMEQVYYTDAASRAIRQVNKYTGGAAKKINLKRMAHPPIDVKVVHPLNQPIEDPVAVSPGCDGRAGPCVNVCSNPTEQGLCQCSEGFTLSKHGNHCEDINECALWSHGCSLGCENVPGSYFCSCPQGYALLPDRRTCQETFPCEGNMTQCDGGCVRSESGPVCVCSEGSTLLPGGLSCSGCSSADRGGCSQLCSPTTLGHWECECVPGYRLHQDGRRCSATGPAPYLVFANMVDVRRVNLDGSGDHRLLEEPQGNVIALDYDPVQNKVYFASTTLRQIERVDLSGGSREVVVSGGLDSPEGLAVDWIHRRLYWTDRGLSTIECSTLNGLDRETVIRKGIQAPRGIAVHPLAKKLFWTDMGRRPAVLGAALDGRERWVVADSGLEMPCGLALDFPQERVFWSDSRTRALESANLDGSERRLLTENEVGRPFDLAVFEDRVWVSDRERRSLGSFDKRSGEKLERIHVNVVQPASIVVVHPMAKSEADMCLHQNGGCSQVCESRLGHPLCSCFPHYQPSEGDSCVPITTSSKPAESGDWGESVDPFSLKNKTLNDESMPLPLPGLSSDGEEADAHLEHSSEPALFTEKMVSDQDDCSSLRCDVNARCLVQTGSASCVCRDGFTGDGDLCVDVDECEAGVSQCSVQSSECVNTAGGYDCQCRPGFTGDGHHCTDVDECSLGSHRCDERAECVNSLGKYLCRCQAGYSGHGHSCHETQTKSALVTTRSPVDPTTRGQQSVESCPSSHDSYCLYEGTCFYFPEMESYACNCVLGYMGERCQFSDLQWWDLQQAEQEKRRNVAIAACMAGLITLLSIAACITYCYGSRSLFREHPSVDDMSVSTSTEETTPNNTSPPRFYVVLDAAEGQLLHARGCSVRAMCPSCTPENAAPPPPPAVSTQHSDQRRNSAATALKGQLTY
SIO_010081: egf
subclass of: SO_0000673
so part of: egf
location: complement(join(1206408..1206596,1206996..1207092,1208197..1208361,1208837..1208996,1209365..1209487,1209717..1209842,1210229..1210345,1210474..1210644,1210802..1210948,1211553..1211720,1211873..1212096,1212299..1212403,1212541..1212689,1212886..1213022,1213118..1213243,1213923..1214045,1217370..1217492,1217671..1217784,1217874..1218076,1218258..1218485,1219233..1219414,1219650..1219843,1221993..1222119))
location: region:1206408-1222119:-1
so has part: feature:1221993-1222119:-1:exon
so has part: feature:1219650-1219843:-1:exon
so has part: feature:1219233-1219414:-1:exon
so has part: feature:1218258-1218485:-1:exon
so has part: feature:1217874-1218076:-1:exon
so has part: feature:1217671-1217784:-1:exon
so has part: feature:1217370-1217492:-1:exon
so has part: feature:1213923-1214045:-1:exon
so has part: feature:1213118-1213243:-1:exon
so has part: feature:1212886-1213022:-1:exon
so has part: feature:1212541-1212689:-1:exon
so has part: feature:1212299-1212403:-1:exon
so has part: feature:1211873-1212096:-1:exon
so has part: feature:1211553-1211720:-1:exon
so has part: feature:1210802-1210948:-1:exon
so has part: feature:1210474-1210644:-1:exon
so has part: feature:1210229-1210345:-1:exon
so has part: feature:1209717-1209842:-1:exon
so has part: feature:1209365-1209487:-1:exon
so has part: feature:1208837-1208996:-1:exon
so has part: feature:1208197-1208361:-1:exon
so has part: feature:1206996-1207092:-1:exon
so has part: feature:1206408-1206596:-1:exon

XP_046881135.1
type: Protein
SIO_000068: ncbiprotein

position:1206408:-1
position: 1206408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222119:-1
position: 1222119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221993-1222119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1219650-1219843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1219233-1219414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218258-1218485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217874-1218076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217671-1217784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1217370-1217492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1213923-1214045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1213118-1213243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1212886-1213022:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1212541-1212689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1212299-1212403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1211873-1212096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1211553-1211720:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1210802-1210948:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1210474-1210644:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1210229-1210345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1209717-1209842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1209365-1209487:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1208837-1208996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1208197-1208361:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1206996-1207092:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1206408-1206596:-1:exon

lrit3a
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: lrit3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1224801..1229266)
location: region:1224801-1229266:-1
so has part: feature:1224801-1229266:-1:exon
subclass of: SO_0000010

124470931
type: Gene
SIO_000068: ncbigene

position:1224801:-1
position: 1224801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229266:-1
position: 1229266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224801-1229266:-1:exon

lrit3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: lrit3a
product: info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047025167.1
SIO_010081: lrit3a
subclass of: SO_0000673
so part of: lrit3a
location: complement(join(1224801..1225879,1226109..1226414,1228048..1228514,1228964..1229266))
location: region:1224801-1229266:-1
so has part: feature:1228964-1229266:-1:exon
so has part: feature:1228048-1228514:-1:exon
so has part: feature:1226109-1226414:-1:exon
so has part: feature:1224801-1225879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1228964-1229266:-1:exon

position:1228964:-1
position: 1228964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228048-1228514:-1:exon

position:1228048:-1
position: 1228048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228514:-1
position: 1228514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1226109-1226414:-1:exon

position:1226109:-1
position: 1226109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226414:-1
position: 1226414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1224801-1225879:-1:exon

position:1225879:-1
position: 1225879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrit3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: lrit3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
translation: MRRLLCAHVLLCCVSVAHSFCPSQCTCVYHGRSDGTGTRSVLCNDPDMSDIPVNVPVDTVKLRVEKTGIRRIPREAFYYLTDLRYLWITYNSVSAVDSGSFYNLKFLHELRLDGNVISTFPWESLKEMPILRTLDLHNNRLTNVPVEAAHYLVNITYLDLSSNKLTTLPSDLMDIWPPFNGATVTSAVSQKVVLGLQDNPWFCDCRISKLIELSKMSNTPVVLMDLFLSCSGPEGLAGVLFQRAELDQCLKPSVMISANKITSSLGSNVLLRCDATGYPTPNLFWTKSDGSFVANSVVQESPGEGVRWSIISLHGISYKDAGDYICKAKNVAGNADATITVSVVGLVSTTSTPLKTVPVDNTSPPIALTSLPSSTTTPSTTMRALTTPPPILLKKTANQQVGSAKPARILQGGGGKKLAADEKSTKKEPWKSVKDLKVVEETTDSAVLLWVADGLPSDTPLTVVYSADEQEDTKRTMDTVASSGKVLLEGLTPGLRYSVCLVAKGSSAGKDPCTEFYTLEVLDDEGQNKLLMIVSGMACAVALPVIILLVYKILALYCNRNNTTLEDDELEKESYVKFETLTLKQRTTLPNEHWTRRETHDSERMLLCSRSSIDSQMTYKSDSSRSEFLC
SIO_010081: lrit3a
subclass of: SO_0000673
so part of: lrit3a
location: complement(join(1224876..1225879,1226109..1226414,1228048..1228514,1228964..1229079))
location: region:1224876-1229079:-1
so has part: feature:1228964-1229079:-1:exon
so has part: feature:1228048-1228514:-1:exon
so has part: feature:1226109-1226414:-1:exon
so has part: feature:1224876-1225879:-1:exon

XP_046881123.1
type: Protein
SIO_000068: ncbiprotein

position:1224876:-1
position: 1224876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229079:-1
position: 1229079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228964-1229079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228048-1228514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1226109-1226414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1224876-1225879:-1:exon

gpm6aa
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gpm6aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1230974..1245546)
location: region:1230974-1245546:-1
so has part: feature:1230974-1245546:-1:exon
subclass of: SO_0000010

124470229
type: Gene
SIO_000068: ncbigene

position:1230974:-1
position: 1230974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245546:-1
position: 1245546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230974-1245546:-1:exon

gpm6aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gpm6aa
product: glycoprotein M6Aa
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047024013.1
SIO_010081: gpm6aa
subclass of: SO_0000673
so part of: gpm6aa
location: complement(join(1230974..1232644,1233990..1234055,1234321..1234397,1234707..1234860,1235089..1235245,1235809..1236001,1245112..1245546))
location: region:1230974-1245546:-1
so has part: feature:1245112-1245546:-1:exon
so has part: feature:1235809-1236001:-1:exon
so has part: feature:1235089-1235245:-1:exon
so has part: feature:1234707-1234860:-1:exon
so has part: feature:1234321-1234397:-1:exon
so has part: feature:1233990-1234055:-1:exon
so has part: feature:1230974-1232644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245112-1245546:-1:exon

position:1245112:-1
position: 1245112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235809-1236001:-1:exon

position:1235809:-1
position: 1235809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236001:-1
position: 1236001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235089-1235245:-1:exon

position:1235089:-1
position: 1235089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235245:-1
position: 1235245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1234707-1234860:-1:exon

position:1234707:-1
position: 1234707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234860:-1
position: 1234860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1234321-1234397:-1:exon

position:1234321:-1
position: 1234321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234397:-1
position: 1234397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1233990-1234055:-1:exon

position:1233990:-1
position: 1233990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234055:-1
position: 1234055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1230974-1232644:-1:exon

position:1232644:-1
position: 1232644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gpm6aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gpm6aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein M6Aa
translation: MEEDMEEGQNQKGCLECCIKCLGGIPYPSLIATILLYAGVALFCGCGHEALSGTVTILQNYFEVVRSPMDSLDVFTMIDIIKYVIYGIASAFFVYGILLMVEGFFTSGAIKDLYGDFKITTCGRCVSAWFIMLTYIFMLAWLGVTAFTSLPVFMYFNIWTICQNTTMLEGVTLCLDPRQYGIVPIAEAKTVCTKSEKFYKMCESNELDMTFHLFICALAGAGAAVIAMIHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: gpm6aa
subclass of: SO_0000673
so part of: gpm6aa
location: complement(join(1232492..1232644,1233990..1234055,1234321..1234397,1234707..1234860,1235089..1235245,1235809..1236001,1245112..1245148))
location: region:1232492-1245148:-1
so has part: feature:1245112-1245148:-1:exon
so has part: feature:1235809-1236001:-1:exon
so has part: feature:1235089-1235245:-1:exon
so has part: feature:1234707-1234860:-1:exon
so has part: feature:1234321-1234397:-1:exon
so has part: feature:1233990-1234055:-1:exon
so has part: feature:1232492-1232644:-1:exon

XP_046879969.1
type: Protein
SIO_000068: ncbiprotein

position:1232492:-1
position: 1232492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245148:-1
position: 1245148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245112-1245148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235809-1236001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235089-1235245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1234707-1234860:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1234321-1234397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233990-1234055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232492-1232644:-1:exon

spata4
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: spata4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1248802..1253017)
location: region:1248802-1253017:-1
so has part: feature:1248802-1253017:-1:exon
subclass of: SO_0000010

124470816
type: Gene
SIO_000068: ncbigene

position:1248802:-1
position: 1248802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253017:-1
position: 1253017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248802-1253017:-1:exon

spata4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: spata4
product: spermatogenesis associated 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_047024950.1
SIO_010081: spata4
subclass of: SO_0000673
so part of: spata4
location: complement(join(1248802..1251516,1251664..1251774,1252075..1252295,1252455..1252573,1252699..1252828,1252917..1253017))
location: region:1248802-1253017:-1
so has part: feature:1252917-1253017:-1:exon
so has part: feature:1252699-1252828:-1:exon
so has part: feature:1252455-1252573:-1:exon
so has part: feature:1252075-1252295:-1:exon
so has part: feature:1251664-1251774:-1:exon
so has part: feature:1248802-1251516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1252917-1253017:-1:exon

position:1252917:-1
position: 1252917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1252699-1252828:-1:exon

position:1252699:-1
position: 1252699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252828:-1
position: 1252828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1252455-1252573:-1:exon

position:1252455:-1
position: 1252455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252573:-1
position: 1252573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1252075-1252295:-1:exon

position:1252075:-1
position: 1252075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252295:-1
position: 1252295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1251664-1251774:-1:exon

position:1251664:-1
position: 1251664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251774:-1
position: 1251774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1248802-1251516:-1:exon

position:1251516:-1
position: 1251516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spata4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: spata4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 4
translation: MAYPQTPKRTGIPREVLKWIQSLDLSFSPKNMRRDFSNGYLVAEIFSWYYPENLTMHSYDNGTSIATKLGNWAQIERFLQKENIQLLKEAIDGSIHCKPGAAELLVQEMFTALTNRRIRSFQKDELDFSDRGYQEQLPMVARSTASKAIKSNLRLSELIAEPSITTNQRKVQAIIHMHLEQRAAEREQNPKRFNRKPTVGTLVARLPPSRRHGNTDLDTSGSFSSGTKSCPSSVRSKPHVYFKEIEVHQPNRRSLSN
SIO_010081: spata4
subclass of: SO_0000673
so part of: spata4
location: complement(join(1251425..1251516,1251664..1251774,1252075..1252295,1252455..1252573,1252699..1252828,1252917..1253017))
location: region:1251425-1253017:-1
so has part: feature:1252917-1253017:-1:exon
so has part: feature:1252699-1252828:-1:exon
so has part: feature:1252455-1252573:-1:exon
so has part: feature:1252075-1252295:-1:exon
so has part: feature:1251664-1251774:-1:exon
so has part: feature:1251425-1251516:-1:exon

XP_046880906.1
type: Protein
SIO_000068: ncbiprotein

position:1251425:-1
position: 1251425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252917-1253017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1252699-1252828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252455-1252573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252075-1252295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251664-1251774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1251425-1251516:-1:exon

asb5a
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: asb5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1254107..1257953)
location: region:1254107-1257953:-1
so has part: feature:1254107-1257953:-1:exon
subclass of: SO_0000010

124470811
type: Gene
SIO_000068: ncbigene

position:1254107:-1
position: 1254107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257953:-1
position: 1257953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254107-1257953:-1:exon

asb5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: asb5a
product: ankyrin repeat and SOCS box containing 5a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_047024936.1
SIO_010081: asb5a
subclass of: SO_0000673
so part of: asb5a
location: complement(join(1254107..1254249,1254618..1254809,1255047..1255181,1255806..1255956,1256155..1256262,1256560..1256639,1257688..1257953))
location: region:1254107-1257953:-1
so has part: feature:1257688-1257953:-1:exon
so has part: feature:1256560-1256639:-1:exon
so has part: feature:1256155-1256262:-1:exon
so has part: feature:1255806-1255956:-1:exon
so has part: feature:1255047-1255181:-1:exon
so has part: feature:1254618-1254809:-1:exon
so has part: feature:1254107-1254249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257688-1257953:-1:exon

position:1257688:-1
position: 1257688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256560-1256639:-1:exon

position:1256560:-1
position: 1256560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256639:-1
position: 1256639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256155-1256262:-1:exon

position:1256155:-1
position: 1256155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256262:-1
position: 1256262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255806-1255956:-1:exon

position:1255806:-1
position: 1255806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255956:-1
position: 1255956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1255047-1255181:-1:exon

position:1255047:-1
position: 1255047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255181:-1
position: 1255181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1254618-1254809:-1:exon

position:1254618:-1
position: 1254618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254809:-1
position: 1254809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254107-1254249:-1:exon

position:1254249:-1
position: 1254249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

asb5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: asb5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 5
translation: MPESAESTDKPFTAHLSNVYLSILALFCFKLFVKISLNLLTYFYVIRGNRKEAARISAEFYDYGKRQGSWADRSPLHDAASQGRLLVLRNLILQGHNVNVLTIDHVSPLHDACLGNHVACARLLIESGANVNVTTIDGRTPLFNACLVGSVSCTDLLLERGAKPQAPVFQPSPIHEATSRGHSKCVEALVAWGADVDMDIPHLGTPLYTACVFQELECTRMLLREGAHVQRGKYLDTPLHAAAQKDCTAMVKMLLDFGADINARNLEFQKPVEVSPPGSSTESFLMLYEVTPRLLSQLCRQCIRESVGRDRFHLISRLPLPSPVKNYLQYR
SIO_010081: asb5a
subclass of: SO_0000673
so part of: asb5a
location: complement(join(1254122..1254249,1254618..1254809,1255047..1255181,1255806..1255956,1256155..1256262,1256560..1256639,1257688..1257889))
location: region:1254122-1257889:-1
so has part: feature:1257688-1257889:-1:exon
so has part: feature:1256560-1256639:-1:exon
so has part: feature:1256155-1256262:-1:exon
so has part: feature:1255806-1255956:-1:exon
so has part: feature:1255047-1255181:-1:exon
so has part: feature:1254618-1254809:-1:exon
so has part: feature:1254122-1254249:-1:exon

XP_046880892.1
type: Protein
SIO_000068: ncbiprotein

position:1254122:-1
position: 1254122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257889:-1
position: 1257889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257688-1257889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256560-1256639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256155-1256262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1255806-1255956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1255047-1255181:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254618-1254809:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254122-1254249:-1:exon

neil3
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: neil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1258546..1263441
location: region:1258546-1263441:1
so has part: feature:1258546-1263441:1:exon
subclass of: SO_0000010

124469008
type: Gene
SIO_000068: ncbigene

position:1258546:1
position: 1258546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263441:1
position: 1263441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258546-1263441:1:exon

neil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: neil3
product: nei-like DNA glycosylase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022091.1
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258546..1258759,1258856..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1263441)
location: region:1258546-1263441:1
so has part: feature:1258546-1258759:1:exon
so has part: feature:1258856-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1263441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258546-1258759:1:exon

position:1258759:1
position: 1258759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258856-1258983:1:exon

position:1258856:1
position: 1258856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258983:1
position: 1258983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

position:1259153:1
position: 1259153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259287:1
position: 1259287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

position:1259577:1
position: 1259577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259790:1
position: 1259790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

position:1260281:1
position: 1260281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260355:1
position: 1260355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

position:1260677:1
position: 1260677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260843:1
position: 1260843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

position:1261371:1
position: 1261371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261540:1
position: 1261540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

position:1261699:1
position: 1261699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262113:1
position: 1262113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

position:1262458:1
position: 1262458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262632:1
position: 1262632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1263441:1:exon

position:1262728:1
position: 1262728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

neil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: neil3
product: nei-like DNA glycosylase 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022099.1
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258546..1258759,1258874..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1263441)
location: region:1258546-1263441:1
so has part: feature:1258546-1258759:1:exon
so has part: feature:1258874-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1263441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258546-1258759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258874-1258983:1:exon

position:1258874:1
position: 1258874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1263441:1:exon

neil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: neil3
product: nei-like DNA glycosylase 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022107.1
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258546..1258759,1258904..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1263441)
location: region:1258546-1263441:1
so has part: feature:1258546-1258759:1:exon
so has part: feature:1258904-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1263441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258546-1258759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258904-1258983:1:exon

position:1258904:1
position: 1258904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1263441:1:exon

neil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: neil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X1
translation: MVEGPGCTLNGEKIRSRVQQGQKVKEFRSPTTTQSTTYLQRNDPNKGSFQIFTGCQYTGAATLGKELFLYFGQRALRVHFGMNGSMRINPAKTPGRKSPSPILEIHLTRDVICFFDSTVEIRLAEDCEHRIRAMHSLDVCSPQFSSSRAEEVVRGQRDRMLCDVLLDQTILPGVGNIIKNEALFDSGLHPAVKINQLTDEQVHHIVKMTRDFTLLFYKCRKSGSPLHKHYKVYKRPHCGQCRNAITVCRLGDNGRMTYFCSRCQSADPGEVDLSKLPARNSLLDWAYRASVEPSDDVARREEEEWACELCTLVNQPAVRTCEACLTPRTQVPTDEPSVEKALFTRDLIKYPCNAFSKPREELKVNRKAAFGSTTLVFTDLSKKPNQANSPFSLASSHLNSLAGERGLNKQNVCQGTTSPNYASGGWQNKSTELSKRESLASSSQPSKKMRIDHSPFPGSKAHNGALLVSSSQTKAPNEETQGVPTIPCCTSHRCPSVLRVVNKEGENKGRQFYNCSFPRDKRCNFFEWADLHFPLCNHGKRCLRRTVLKLGPNNGRNFYVCSFLMGKQCDYFQWA
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258658..1258759,1258856..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1262874)
location: region:1258658-1262874:1
so has part: feature:1258658-1258759:1:exon
so has part: feature:1258856-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1262874:1:exon

XP_046878047.1
type: Protein
SIO_000068: ncbiprotein

position:1258658:1
position: 1258658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262874:1
position: 1262874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258658-1258759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258856-1258983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1262874:1:exon

neil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: neil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X2
translation: MVEGPGCTLNGEKIRSRVQQGQKVKEFRSPTTTQRNDPNKGSFQIFTGCQYTGAATLGKELFLYFGQRALRVHFGMNGSMRINPAKTPGRKSPSPILEIHLTRDVICFFDSTVEIRLAEDCEHRIRAMHSLDVCSPQFSSSRAEEVVRGQRDRMLCDVLLDQTILPGVGNIIKNEALFDSGLHPAVKINQLTDEQVHHIVKMTRDFTLLFYKCRKSGSPLHKHYKVYKRPHCGQCRNAITVCRLGDNGRMTYFCSRCQSADPGEVDLSKLPARNSLLDWAYRASVEPSDDVARREEEEWACELCTLVNQPAVRTCEACLTPRTQVPTDEPSVEKALFTRDLIKYPCNAFSKPREELKVNRKAAFGSTTLVFTDLSKKPNQANSPFSLASSHLNSLAGERGLNKQNVCQGTTSPNYASGGWQNKSTELSKRESLASSSQPSKKMRIDHSPFPGSKAHNGALLVSSSQTKAPNEETQGVPTIPCCTSHRCPSVLRVVNKEGENKGRQFYNCSFPRDKRCNFFEWADLHFPLCNHGKRCLRRTVLKLGPNNGRNFYVCSFLMGKQCDYFQWA
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258658..1258759,1258874..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1262874)
location: region:1258658-1262874:1
so has part: feature:1258658-1258759:1:exon
so has part: feature:1258874-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1262874:1:exon

XP_046878055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1258658-1258759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258874-1258983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1262874:1:exon

neil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: neil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X3
translation: MVEGPGCTLNGEKIRSRVQQGQKVKEFRSPTTTQIFTGCQYTGAATLGKELFLYFGQRALRVHFGMNGSMRINPAKTPGRKSPSPILEIHLTRDVICFFDSTVEIRLAEDCEHRIRAMHSLDVCSPQFSSSRAEEVVRGQRDRMLCDVLLDQTILPGVGNIIKNEALFDSGLHPAVKINQLTDEQVHHIVKMTRDFTLLFYKCRKSGSPLHKHYKVYKRPHCGQCRNAITVCRLGDNGRMTYFCSRCQSADPGEVDLSKLPARNSLLDWAYRASVEPSDDVARREEEEWACELCTLVNQPAVRTCEACLTPRTQVPTDEPSVEKALFTRDLIKYPCNAFSKPREELKVNRKAAFGSTTLVFTDLSKKPNQANSPFSLASSHLNSLAGERGLNKQNVCQGTTSPNYASGGWQNKSTELSKRESLASSSQPSKKMRIDHSPFPGSKAHNGALLVSSSQTKAPNEETQGVPTIPCCTSHRCPSVLRVVNKEGENKGRQFYNCSFPRDKRCNFFEWADLHFPLCNHGKRCLRRTVLKLGPNNGRNFYVCSFLMGKQCDYFQWA
SIO_010081: neil3
subclass of: SO_0000673
so part of: neil3
location: join(1258658..1258759,1258904..1258983,1259153..1259287,1259577..1259790,1260281..1260355,1260677..1260843,1261371..1261540,1261699..1262113,1262458..1262632,1262728..1262874)
location: region:1258658-1262874:1
so has part: feature:1258658-1258759:1:exon
so has part: feature:1258904-1258983:1:exon
so has part: feature:1259153-1259287:1:exon
so has part: feature:1259577-1259790:1:exon
so has part: feature:1260281-1260355:1:exon
so has part: feature:1260677-1260843:1:exon
so has part: feature:1261371-1261540:1:exon
so has part: feature:1261699-1262113:1:exon
so has part: feature:1262458-1262632:1:exon
so has part: feature:1262728-1262874:1:exon

XP_046878063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1258658-1258759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258904-1258983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259153-1259287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259577-1259790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260281-1260355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260677-1260843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261371-1261540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261699-1262113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262458-1262632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262728-1262874:1:exon

aga
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1263271..1267488)
location: region:1263271-1267488:-1
so has part: feature:1263271-1267488:-1:exon
subclass of: SO_0000010

124469031
type: Gene
SIO_000068: ncbigene

position:1263271:-1
position: 1263271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267488:-1
position: 1267488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263271-1267488:-1:exon

aga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aga
product: aspartylglucosaminidase, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022148.1
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263271..1263546,1263630..1263763,1264139..1264246,1264816..1264891,1265093..1265201,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267488))
location: region:1263271-1267488:-1
so has part: feature:1267139-1267488:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265201:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264139-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263271-1263546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267488:-1:exon

position:1267139:-1
position: 1267139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

position:1266565:-1
position: 1266565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266718:-1
position: 1266718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

position:1266062:-1
position: 1266062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266174:-1
position: 1266174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

position:1265756:-1
position: 1265756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265868:-1
position: 1265868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265201:-1:exon

position:1265093:-1
position: 1265093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265201:-1
position: 1265201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

position:1264816:-1
position: 1264816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264891:-1
position: 1264891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1264139-1264246:-1:exon

position:1264139:-1
position: 1264139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264246:-1
position: 1264246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

position:1263630:-1
position: 1263630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263763:-1
position: 1263763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1263271-1263546:-1:exon

position:1263546:-1
position: 1263546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aga
product: aspartylglucosaminidase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022125.1
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263271..1263546,1263630..1263763,1264046..1264246,1264816..1264891,1265093..1265201,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267488))
location: region:1263271-1267488:-1
so has part: feature:1267139-1267488:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265201:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264046-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263271-1263546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264046-1264246:-1:exon

position:1264046:-1
position: 1264046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263271-1263546:-1:exon

aga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aga
product: aspartylglucosaminidase, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022141.1
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263271..1263546,1263630..1263763,1264139..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267488))
location: region:1263271-1267488:-1
so has part: feature:1267139-1267488:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264139-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263271-1263546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

position:1265204:-1
position: 1265204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264139-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263271-1263546:-1:exon

aga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aga
product: aspartylglucosaminidase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022134.1
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263271..1263546,1263630..1263763,1264075..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267488))
location: region:1263271-1267488:-1
so has part: feature:1267139-1267488:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264075-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263271-1263546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264075-1264246:-1:exon

position:1264075:-1
position: 1264075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263271-1263546:-1:exon

aga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: aga
product: aspartylglucosaminidase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047022117.1
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263271..1263546,1263630..1263763,1264046..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267488))
location: region:1263271-1267488:-1
so has part: feature:1267139-1267488:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264046-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263271-1263546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264046-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263271-1263546:-1:exon

aga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X5
translation: MTTFLVYILMLPFGHATLPFVINTWPFKDATSAAWSVLQAGGSILDAVEQGCSRCEVDQCDGSVGFGGSPDENGETTLDAMIMNGDTMEVGAVADLRRIKNAIGVARAVMQHTEHTFLVGESASVFAENMGFTAEDLTTNKSLSIFTQWLKDNCQPNYRKNVLPDPSKNCGPYKPRAMLKQRKSERQIDIHAHDTIGMIAIGQDGHVAAGTSTNGANHKIPGRVGDSSVAGAGAYADSTAGGAAATGDGDVMMRFLPSFLAVELMRTGADPSSACKTAISRIKRYYPEFFGAVICANTTGHYGAACNKLPGFSKFSFMVSDSPSNVPLLKSVDCF
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263446..1263546,1263630..1263763,1264139..1264246,1264816..1264891,1265093..1265201,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267238))
location: region:1263446-1267238:-1
so has part: feature:1267139-1267238:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265201:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264139-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263446-1263546:-1:exon

XP_046878104.1
type: Protein
SIO_000068: ncbiprotein

position:1263446:-1
position: 1263446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267238:-1
position: 1267238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264139-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263446-1263546:-1:exon

aga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2
translation: MTTFLVYILMLPFGHATLPFVINTWPFKDATSAAWSVLQAGGSILDAVEQGCSRCEVDQCDGSVGFGGSPDENGETTLDAMIMNGDTMEVGAVADLRRIKNAIGVARAVMQHTEHTFLVGESASVFAENMGFTAEDLTTNKSLSIFTQWLKDNCQPNYRKNVLPDPSKNCGPYKPRAMLKQRKSERQIDIHAHDTIGMIAIGQDGHVAAGTSTNGANHKIPGRVGDSSVAGAGAYADSTAGGAAATGDGDVMMRFLPRLDPICSNTLLIQHTHSMETTNVTKVELDGLHFLAVELMRTGADPSSACKTAISRIKRYYPEFFGAVICANTTGHYGAACNKLPGFSKFSFMVSDSPSNVPLLKSVDCF
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263446..1263546,1263630..1263763,1264046..1264246,1264816..1264891,1265093..1265201,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267238))
location: region:1263446-1267238:-1
so has part: feature:1267139-1267238:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265201:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264046-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263446-1263546:-1:exon

XP_046878081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264046-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263446-1263546:-1:exon

aga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X4
translation: MTTFLVYILMLPFGHATLPFVINTWPFKDATSAAWSVLQAGGSILDAVEQGCSRCEVDQCDGSVGFGGSPDENGETTLDAMIMNGDTMEVGAVADLRRIKNAIGVARAVMQHTEHTFLVGESASVFAENMGFTAEDLTTNKSLSIFTQWLKDNCQPNYRKQNVLPDPSKNCGPYKPRAMLKQRKSERQIDIHAHDTIGMIAIGQDGHVAAGTSTNGANHKIPGRVGDSSVAGAGAYADSTAGGAAATGDGDVMMRFLPSFLAVELMRTGADPSSACKTAISRIKRYYPEFFGAVICANTTGHYGAACNKLPGFSKFSFMVSDSPSNVPLLKSVDCF
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263446..1263546,1263630..1263763,1264139..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267238))
location: region:1263446-1267238:-1
so has part: feature:1267139-1267238:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264139-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263446-1263546:-1:exon

XP_046878097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264139-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263446-1263546:-1:exon

aga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X1
translation: MTTFLVYILMLPFGHATLPFVINTWPFKDATSAAWSVLQAGGSILDAVEQGCSRCEVDQCDGSVGFGGSPDENGETTLDAMIMNGDTMEVGAVADLRRIKNAIGVARAVMQHTEHTFLVGESASVFAENMGFTAEDLTTNKSLSIFTQWLKDNCQPNYRKQNVLPDPSKNCGPYKPRAMLKQRKSERQIDIHAHDTIGMIAIGQDGHVAAGTSTNGANHKIPGRVGDSSVAGAGAYADSTAGGAAATGDGDVMMRFLPRLDPICSNTLLIQHTHSMETTNVTKVELDGLHFLAVELMRTGADPSSACKTAISRIKRYYPEFFGAVICANTTGHYGAACNKLPGFSKFSFMVSDSPSNVPLLKSVDCF
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263446..1263546,1263630..1263763,1264046..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267238))
location: region:1263446-1267238:-1
so has part: feature:1267139-1267238:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264046-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263446-1263546:-1:exon

XP_046878073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264046-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263446-1263546:-1:exon

aga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: aga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X3
translation: MTTFLVYILMLPFGHATLPFVINTWPFKDATSAAWSVLQAGGSILDAVEQGCSRCEVDQCDGSVGFGGSPDENGETTLDAMIMNGDTMEVGAVADLRRIKNAIGVARAVMQHTEHTFLVGESASVFAENMGFTAEDLTTNKSLSIFTQWLKDNCQPNYRKQNVLPDPSKNCGPYKPRAMLKQRKSERQIDIHAHDTIGMIAIGQDGHVAAGTSTNGANHKIPGRVGDSSVAGAGAYADSTAGGAAATGDGDVMMRFLPRLDPICSNTLLIQHTHSMETTNFPGCGADEDWSRPILSLQDSHLQDQAVLPRILWGRHLCQHNWSLWCCLQQASWILQILLHGVRLSI
SIO_010081: aga
subclass of: SO_0000673
so part of: aga
location: complement(join(1263480..1263546,1263630..1263763,1264075..1264246,1264816..1264891,1265093..1265204,1265756..1265868,1266062..1266174,1266565..1266718,1267139..1267238))
location: region:1263480-1267238:-1
so has part: feature:1267139-1267238:-1:exon
so has part: feature:1266565-1266718:-1:exon
so has part: feature:1266062-1266174:-1:exon
so has part: feature:1265756-1265868:-1:exon
so has part: feature:1265093-1265204:-1:exon
so has part: feature:1264816-1264891:-1:exon
so has part: feature:1264075-1264246:-1:exon
so has part: feature:1263630-1263763:-1:exon
so has part: feature:1263480-1263546:-1:exon

XP_046878090.1
type: Protein
SIO_000068: ncbiprotein

position:1263480:-1
position: 1263480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267139-1267238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266565-1266718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266062-1266174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265756-1265868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265093-1265204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264816-1264891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264075-1264246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1263630-1263763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1263480-1263546:-1:exon

si:dkey-237h12.3
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: si:dkey-237h12.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1286464..1386421
location: region:1286464-1386421:1
so has part: feature:1286464-1386421:1:exon
subclass of: SO_0000010

124468822
type: Gene
SIO_000068: ncbigene

position:1286464:1
position: 1286464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386421:1
position: 1386421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286464-1386421:1:exon

si:dkey-237h12.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: si:dkey-237h12.3
product: teneurin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047021795.1
SIO_010081: si:dkey-237h12.3
subclass of: SO_0000673
so part of: si:dkey-237h12.3
location: join(1286464..1286934,1296124..1296616,1300061..1300336,1333408..1333633,1340912..1341150,1344185..1344310,1346398..1346612,1348108..1348315,1349220..1349321,1350125..1350319,1352405..1352605,1355160..1355345,1357140..1357160,1358435..1358581,1358814..1359036,1361484..1361603,1364615..1364876,1365143..1365410,1366013..1366156,1370792..1371041,1372445..1372465,1373574..1373806,1376011..1376165,1377609..1378492,1378826..1379001,1379573..1379808,1380355..1380651,1381900..1383511,1383641..1383771,1384368..1386421)
location: region:1286464-1386421:1
so has part: feature:1286464-1286934:1:exon
so has part: feature:1296124-1296616:1:exon
so has part: feature:1300061-1300336:1:exon
so has part: feature:1333408-1333633:1:exon
so has part: feature:1340912-1341150:1:exon
so has part: feature:1344185-1344310:1:exon
so has part: feature:1346398-1346612:1:exon
so has part: feature:1348108-1348315:1:exon
so has part: feature:1349220-1349321:1:exon
so has part: feature:1350125-1350319:1:exon
so has part: feature:1352405-1352605:1:exon
so has part: feature:1355160-1355345:1:exon
so has part: feature:1357140-1357160:1:exon
so has part: feature:1358435-1358581:1:exon
so has part: feature:1358814-1359036:1:exon
so has part: feature:1361484-1361603:1:exon
so has part: feature:1364615-1364876:1:exon
so has part: feature:1365143-1365410:1:exon
so has part: feature:1366013-1366156:1:exon
so has part: feature:1370792-1371041:1:exon
so has part: feature:1372445-1372465:1:exon
so has part: feature:1373574-1373806:1:exon
so has part: feature:1376011-1376165:1:exon
so has part: feature:1377609-1378492:1:exon
so has part: feature:1378826-1379001:1:exon
so has part: feature:1379573-1379808:1:exon
so has part: feature:1380355-1380651:1:exon
so has part: feature:1381900-1383511:1:exon
so has part: feature:1383641-1383771:1:exon
so has part: feature:1384368-1386421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1286464-1286934:1:exon

position:1286934:1
position: 1286934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296124-1296616:1:exon

position:1296124:1
position: 1296124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296616:1
position: 1296616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1300061-1300336:1:exon

position:1300061:1
position: 1300061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300336:1
position: 1300336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1333408-1333633:1:exon

position:1333408:1
position: 1333408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333633:1
position: 1333633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1340912-1341150:1:exon

position:1340912:1
position: 1340912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341150:1
position: 1341150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1344185-1344310:1:exon

position:1344185:1
position: 1344185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344310:1
position: 1344310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1346398-1346612:1:exon

position:1346398:1
position: 1346398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1346612:1
position: 1346612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1348108-1348315:1:exon

position:1348108:1
position: 1348108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348315:1
position: 1348315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1349220-1349321:1:exon

position:1349220:1
position: 1349220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349321:1
position: 1349321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1350125-1350319:1:exon

position:1350125:1
position: 1350125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350319:1
position: 1350319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1352405-1352605:1:exon

position:1352405:1
position: 1352405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352605:1
position: 1352605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1355160-1355345:1:exon

position:1355160:1
position: 1355160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355345:1
position: 1355345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1357140-1357160:1:exon

position:1357140:1
position: 1357140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357160:1
position: 1357160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1358435-1358581:1:exon

position:1358435:1
position: 1358435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358581:1
position: 1358581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1358814-1359036:1:exon

position:1358814:1
position: 1358814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359036:1
position: 1359036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1361484-1361603:1:exon

position:1361484:1
position: 1361484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361603:1
position: 1361603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1364615-1364876:1:exon

position:1364615:1
position: 1364615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364876:1
position: 1364876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1365143-1365410:1:exon

position:1365143:1
position: 1365143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365410:1
position: 1365410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1366013-1366156:1:exon

position:1366013:1
position: 1366013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366156:1
position: 1366156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1370792-1371041:1:exon

position:1370792:1
position: 1370792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371041:1
position: 1371041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1372445-1372465:1:exon

position:1372445:1
position: 1372445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372465:1
position: 1372465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1373574-1373806:1:exon

position:1373574:1
position: 1373574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373806:1
position: 1373806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1376011-1376165:1:exon

position:1376011:1
position: 1376011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376165:1
position: 1376165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1377609-1378492:1:exon

position:1377609:1
position: 1377609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378492:1
position: 1378492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1378826-1379001:1:exon

position:1378826:1
position: 1378826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379001:1
position: 1379001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1379573-1379808:1:exon

position:1379573:1
position: 1379573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379808:1
position: 1379808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1380355-1380651:1:exon

position:1380355:1
position: 1380355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380651:1
position: 1380651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1381900-1383511:1:exon

position:1381900:1
position: 1381900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383511:1
position: 1383511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1383641-1383771:1:exon

position:1383641:1
position: 1383641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383771:1
position: 1383771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1384368-1386421:1:exon

position:1384368:1
position: 1384368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-237h12.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: si:dkey-237h12.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-3
translation: MEQLKEHRPFCSLSKRERERERERERERDRERDRERDRERERHYTALLADRDKEACRVPTQKSYSSSETIQAYDHDPSQMLFGGRIQEMAIKEAIDYTRPGQAFSLRQLGICEPSSRRGLALCPETGLSHPLGSYTRGTVPTENHEPTALERTMDLWGRGAKSGQSSCMSSRSNSVLTLTDTEMDNKSDTEIGDQLSSQQGPPPQPPAPPPHKQQPSITSLSSGSLANQRSPSPPPTAGLAAELQGTAECAQLQDSWVLGSNVALESRHFLFKTGPGTTPFFGTATPGYTMATGAVYSTPARPLPRNTLSRGAFKFKKSPKHCSWRCTALSAVAVAVLLSLLLCYCIAMHLLGLNWQLQEMENPPAFGNGAGQPRPTMQSVVTALSADSGRNGLVHQENNSIDSGQVEVGRRVTQGIPPGVFWRSRLAMEKPYFLKFNISVQKNALIGVYGRKGLPPTHTQYDFVELLDGSRLIAKDRQMGSEPLKARAEWQVSLHQAGFIQYLDAGVWHLAFYNDGRGLEAVSYNTIVQESVMKCSYNCYGNGECVSGSCDCFPGFIGPYCSRAACPVLCSDNGQYSRGRCQCYSGWKGTECDVPSSQCIDPQCGGHGVCVAGSCMCSAGRRGVVCEQVDCVDPECSAHGSCHHGECHCNPGWAGSSCETLRSTCPEQCSNHGTFHTESGTCVCEADWTGVDCSVEVCVVECGPHGACVGGACQCEEGWVGSECDQRDCHPRCSDHGVCREGQCDCHQGWTGEHCSIALDSRVSDGCPGLCNSNGRCVLDQNGWRCICQSGWRGLGCDVATETACSDGKDNEGDGLVDCMDPDCCAQSACHTQSYCQGSPDPDTLAARDPAAPSSPHTASRSFYDHVSFLVGPGGTHVLPGDNPFNSSLASIIRGQVVTGDGTPLIGVNVSFPHYPEYGYTVTRQDGMFDLLANGGASLTVSYERAPFPTMHRTVWIAWNVLYVLDTVVMKRDKNDIPSCYLTGLARPRPLLLATPLSTFYRSSLEESPIIPETQVLHEQVTIPGSDLDLVYLSSRAPGYKPIVKILLTQERLPFGLMKVHLMVAVMGRQFQKSFPAFPDLSYTFIWDKTDAYNQKVYGLSVAVVSVGYEYESCLDAVLWEKRTAVLQGYELDASNMGGWMLDKHHILDVQNGILYKGSGENQFISLQPPVISTIMGNGRRRSISCPSCNGQALGNKLLAPVALAWGVDGSLYVGDFNYIRRIYPSGNVTSVMELRNKDFRHSNNPAHRYYLATNPVTGQLYISDTNSRHIYRPKALGRGRDLQLNGEVVAGTGEHCLPFDESHCGDGGKAVEALLTGPKGIAVDKNGLIYFVDGTTIRKVDQNGIISTILGSNDLTSARPLTCDISMDINQVILEWPTDLAVSPMDNSVFVLDNNIVLRITESGQVSIAAGRPVHCPLAAMDRGLAGGQRAALTPLESAVAIAVSYHGALFIAETDERKFSRIRKVSDDGEITHLAGAPTDCDCKNDNNCDCYQTGDGYAKDARLNGPSSMVVAPDDTLYVADLGNIRIRAISGRGPTLVPSGGVYEVASPDAQELYVFDVNGTHQHTASLLTGDLTYTFGYSTEGDVTAVTDSNGNTLRVRRDPNRMPVRIVAPDNQVIWITMGTNGGLKTLTTQGQELVLLTYHGNNGLLATKTSEIGWTTFYDYDSEGRLMNVTFPSGVVSNLYTDIFSALTVDIESSLTDEELSITTNASSIRAFYTLAQDQCRSSYQVGYDNSLRVTYANGMDTHYQTEPHILSGAANPTVARRNMSLPGDSGQNLVEWRFRKEQARGKVIVFGRKLRVNGRNILSVDYDRTLRTEKIYDDHRKFLLKIMYDGAGHPVLWQPSSKLLPVNVSRSSSGQISALQRGPTTERVEYDAQGRLVSRVFADGKTWSYTYLEKSMVLLLHSQRQYIFDFDSLDRLSAVTMPSVARYTMQTIRSVGYYRNVYHPPESNASVAVDYSEDGLLLRVAHLGTGRRVLYKYRRQNKLWEVLYDS…
SIO_010081: si:dkey-237h12.3
subclass of: SO_0000673
so part of: si:dkey-237h12.3
location: join(1296316..1296616,1300061..1300336,1333408..1333633,1340912..1341150,1344185..1344310,1346398..1346612,1348108..1348315,1349220..1349321,1350125..1350319,1352405..1352605,1355160..1355345,1357140..1357160,1358435..1358581,1358814..1359036,1361484..1361603,1364615..1364876,1365143..1365410,1366013..1366156,1370792..1371041,1372445..1372465,1373574..1373806,1376011..1376165,1377609..1378492,1378826..1379001,1379573..1379808,1380355..1380651,1381900..1383511,1383641..1383771,1384368..1385120)
location: region:1296316-1385120:1
so has part: feature:1296316-1296616:1:exon
so has part: feature:1300061-1300336:1:exon
so has part: feature:1333408-1333633:1:exon
so has part: feature:1340912-1341150:1:exon
so has part: feature:1344185-1344310:1:exon
so has part: feature:1346398-1346612:1:exon
so has part: feature:1348108-1348315:1:exon
so has part: feature:1349220-1349321:1:exon
so has part: feature:1350125-1350319:1:exon
so has part: feature:1352405-1352605:1:exon
so has part: feature:1355160-1355345:1:exon
so has part: feature:1357140-1357160:1:exon
so has part: feature:1358435-1358581:1:exon
so has part: feature:1358814-1359036:1:exon
so has part: feature:1361484-1361603:1:exon
so has part: feature:1364615-1364876:1:exon
so has part: feature:1365143-1365410:1:exon
so has part: feature:1366013-1366156:1:exon
so has part: feature:1370792-1371041:1:exon
so has part: feature:1372445-1372465:1:exon
so has part: feature:1373574-1373806:1:exon
so has part: feature:1376011-1376165:1:exon
so has part: feature:1377609-1378492:1:exon
so has part: feature:1378826-1379001:1:exon
so has part: feature:1379573-1379808:1:exon
so has part: feature:1380355-1380651:1:exon
so has part: feature:1381900-1383511:1:exon
so has part: feature:1383641-1383771:1:exon
so has part: feature:1384368-1385120:1:exon

XP_046877751.1
type: Protein
SIO_000068: ncbiprotein

position:1296316:1
position: 1296316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385120:1
position: 1385120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296316-1296616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300061-1300336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333408-1333633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1340912-1341150:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344185-1344310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1346398-1346612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348108-1348315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349220-1349321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1350125-1350319:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1352405-1352605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1355160-1355345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1357140-1357160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1358435-1358581:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1358814-1359036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1361484-1361603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1364615-1364876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1365143-1365410:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1366013-1366156:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1370792-1371041:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1372445-1372465:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1373574-1373806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1376011-1376165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1377609-1378492:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1378826-1379001:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1379573-1379808:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1380355-1380651:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1381900-1383511:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1383641-1383771:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1384368-1385120:1:exon

tdo2a
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: tdo2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1390435..1394217
location: region:1390435-1394217:1
so has part: feature:1390435-1394217:1:exon
subclass of: SO_0000010

124468386
type: Gene
SIO_000068: ncbigene

position:1390435:1
position: 1390435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394217:1
position: 1394217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390435-1394217:1:exon

tdo2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: tdo2a
product: tryptophan 2,3-dioxygenase a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047021061.1
SIO_010081: tdo2a
subclass of: SO_0000673
so part of: tdo2a
location: join(1390435..1390510,1390744..1390849,1390973..1391063,1391180..1391250,1391562..1391689,1392054..1392240,1392448..1392555,1392656..1392767,1392982..1393039,1393270..1393349,1393671..1393761,1393966..1394217)
location: region:1390435-1394217:1
so has part: feature:1390435-1390510:1:exon
so has part: feature:1390744-1390849:1:exon
so has part: feature:1390973-1391063:1:exon
so has part: feature:1391180-1391250:1:exon
so has part: feature:1391562-1391689:1:exon
so has part: feature:1392054-1392240:1:exon
so has part: feature:1392448-1392555:1:exon
so has part: feature:1392656-1392767:1:exon
so has part: feature:1392982-1393039:1:exon
so has part: feature:1393270-1393349:1:exon
so has part: feature:1393671-1393761:1:exon
so has part: feature:1393966-1394217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1390435-1390510:1:exon

position:1390510:1
position: 1390510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390744-1390849:1:exon

position:1390744:1
position: 1390744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390849:1
position: 1390849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1390973-1391063:1:exon

position:1390973:1
position: 1390973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391063:1
position: 1391063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1391180-1391250:1:exon

position:1391180:1
position: 1391180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391250:1
position: 1391250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1391562-1391689:1:exon

position:1391562:1
position: 1391562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391689:1
position: 1391689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1392054-1392240:1:exon

position:1392054:1
position: 1392054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392240:1
position: 1392240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1392448-1392555:1:exon

position:1392448:1
position: 1392448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392555:1
position: 1392555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1392656-1392767:1:exon

position:1392656:1
position: 1392656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392767:1
position: 1392767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1392982-1393039:1:exon

position:1392982:1
position: 1392982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393039:1
position: 1393039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1393270-1393349:1:exon

position:1393270:1
position: 1393270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393349:1
position: 1393349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1393671-1393761:1:exon

position:1393671:1
position: 1393671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393761:1
position: 1393761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1393966-1394217:1:exon

position:1393966:1
position: 1393966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tdo2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: tdo2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tryptophan 2,3-dioxygenase A
translation: MSGCPYLEKRHLLFKSKPPNKDEEDDSSQAGINNASKGGIIYGDYLQLDKVVTAQVLQSELKGNKIHDEHLFIVTHQAYELWFKQILWELDSVREIFISGHVRDERNMLKVNTRIHRIVMIFRLLVDQFSVLETMTALDFFDFREYLTPASGFQSLQFRLLENKIGVPDNLRVPYNRRHYRDIFKGRESEMLLCSEKEPTLLKLVEQWLERTPGLEEDGFNFWGKLEINIFDGLRLEKEKIEKVQDLEDKEEMMEELTKKKELFTSLFDEKIHEHLMSKGDRRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDMLMTKWRYNHVCMVHRMIGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLATFLVPRHWVPRLNPNVHTFLYTAEYCDSSYCSSEDSD
SIO_010081: tdo2a
subclass of: SO_0000673
so part of: tdo2a
location: join(1390476..1390510,1390744..1390849,1390973..1391063,1391180..1391250,1391562..1391689,1392054..1392240,1392448..1392555,1392656..1392767,1392982..1393039,1393270..1393349,1393671..1393761,1393966..1394119)
location: region:1390476-1394119:1
so has part: feature:1390476-1390510:1:exon
so has part: feature:1390744-1390849:1:exon
so has part: feature:1390973-1391063:1:exon
so has part: feature:1391180-1391250:1:exon
so has part: feature:1391562-1391689:1:exon
so has part: feature:1392054-1392240:1:exon
so has part: feature:1392448-1392555:1:exon
so has part: feature:1392656-1392767:1:exon
so has part: feature:1392982-1393039:1:exon
so has part: feature:1393270-1393349:1:exon
so has part: feature:1393671-1393761:1:exon
so has part: feature:1393966-1394119:1:exon

XP_046877017.1
type: Protein
SIO_000068: ncbiprotein

position:1390476:1
position: 1390476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394119:1
position: 1394119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390476-1390510:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390744-1390849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390973-1391063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391180-1391250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1391562-1391689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1392054-1392240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392448-1392555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1392656-1392767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1392982-1393039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393270-1393349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1393671-1393761:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1393966-1394119:1:exon

pdgfc
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: pdgfc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1419893..1450063)
location: region:1419893-1450063:-1
so has part: feature:1419893-1450063:-1:exon
subclass of: SO_0000010

124468791
type: Gene
SIO_000068: ncbigene

position:1419893:-1
position: 1419893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450063:-1
position: 1450063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419893-1450063:-1:exon

pdgfc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: pdgfc
product: platelet derived growth factor c
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047021756.1
SIO_010081: pdgfc
subclass of: SO_0000673
so part of: pdgfc
location: complement(join(1419893..1421104,1421283..1421500,1421729..1421936,1426592..1426772,1430484..1430676,1449215..1450063))
location: region:1419893-1450063:-1
so has part: feature:1449215-1450063:-1:exon
so has part: feature:1430484-1430676:-1:exon
so has part: feature:1426592-1426772:-1:exon
so has part: feature:1421729-1421936:-1:exon
so has part: feature:1421283-1421500:-1:exon
so has part: feature:1419893-1421104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1449215-1450063:-1:exon

position:1449215:-1
position: 1449215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1430484-1430676:-1:exon

position:1430484:-1
position: 1430484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430676:-1
position: 1430676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1426592-1426772:-1:exon

position:1426592:-1
position: 1426592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426772:-1
position: 1426772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1421729-1421936:-1:exon

position:1421729:-1
position: 1421729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421936:-1
position: 1421936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1421283-1421500:-1:exon

position:1421283:-1
position: 1421283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421500:-1
position: 1421500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1419893-1421104:-1:exon

position:1421104:-1
position: 1421104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pdgfc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: pdgfc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-derived growth factor C
translation: MVIQNVPSTVLCNRRSTLIQMILSLLLLLASLLQQHGSEAESSHISKFQHPSLKEQNGVQESQHEKLVSVAGEGMIQSPDFPHTYPRNTLLEWRLVAASNMRIQLTFDPRFGLEDPEDGICKYDFVEIEEPAESRIVGRWCGSQTVPASHTSKGSQIRVRFASDEYFPSSPGFCLRYSLLPVSISEPEVLVALAPPLQSVDALSEAVAGLGTVEEVMKYLEPERWQLDMDELYKPTWQILGKSFIHNKKSRGVDLNLLREEVKLYSCTPRNFSVSLREELKRTDAIFWPSCLLVRRCGGNCACCSHRCYDCQCVPAKVTKKYHEVLLLKHRSGGRGLQKSMTDVPLEHHEECACVCRDDRD
SIO_010081: pdgfc
subclass of: SO_0000673
so part of: pdgfc
location: complement(join(1420991..1421104,1421283..1421500,1421729..1421936,1426592..1426772,1430484..1430676,1449215..1449386))
location: region:1420991-1449386:-1
so has part: feature:1449215-1449386:-1:exon
so has part: feature:1430484-1430676:-1:exon
so has part: feature:1426592-1426772:-1:exon
so has part: feature:1421729-1421936:-1:exon
so has part: feature:1421283-1421500:-1:exon
so has part: feature:1420991-1421104:-1:exon

XP_046877712.1
type: Protein
SIO_000068: ncbiprotein

position:1420991:-1
position: 1420991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449386:-1
position: 1449386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449215-1449386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430484-1430676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1426592-1426772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421729-1421936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421283-1421500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1420991-1421104:-1:exon

glrbb
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: glrbb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1448650..1472749
location: region:1448650-1472749:1
so has part: feature:1448650-1472749:1:exon
subclass of: SO_0000010

124468783
type: Gene
SIO_000068: ncbigene

position:1448650:1
position: 1448650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472749:1
position: 1472749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448650-1472749:1:exon

glrbb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: glrbb
product: glycine receptor, beta b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047021743.1
SIO_010081: glrbb
subclass of: SO_0000673
so part of: glrbb
location: join(1448650..1448973,1454476..1454567,1457028..1457169,1458872..1458978,1460072..1460139,1462940..1463166,1464930..1465012,1465527..1465667,1467402..1467554,1469194..1469483,1471945..1472749)
location: region:1448650-1472749:1
so has part: feature:1448650-1448973:1:exon
so has part: feature:1454476-1454567:1:exon
so has part: feature:1457028-1457169:1:exon
so has part: feature:1458872-1458978:1:exon
so has part: feature:1460072-1460139:1:exon
so has part: feature:1462940-1463166:1:exon
so has part: feature:1464930-1465012:1:exon
so has part: feature:1465527-1465667:1:exon
so has part: feature:1467402-1467554:1:exon
so has part: feature:1469194-1469483:1:exon
so has part: feature:1471945-1472749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1448650-1448973:1:exon

position:1448973:1
position: 1448973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1454476-1454567:1:exon

position:1454476:1
position: 1454476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454567:1
position: 1454567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457028-1457169:1:exon

position:1457028:1
position: 1457028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457169:1
position: 1457169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1458872-1458978:1:exon

position:1458872:1
position: 1458872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458978:1
position: 1458978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1460072-1460139:1:exon

position:1460072:1
position: 1460072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460139:1
position: 1460139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1462940-1463166:1:exon

position:1462940:1
position: 1462940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463166:1
position: 1463166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1464930-1465012:1:exon

position:1464930:1
position: 1464930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465012:1
position: 1465012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1465527-1465667:1:exon

position:1465527:1
position: 1465527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465667:1
position: 1465667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1467402-1467554:1:exon

position:1467402:1
position: 1467402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467554:1
position: 1467554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1469194-1469483:1:exon

position:1469194:1
position: 1469194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469483:1
position: 1469483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1471945-1472749:1:exon

position:1471945:1
position: 1471945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

glrbb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: glrbb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine receptor, beta b
translation: MKEMKLTAFLLLLLVWMEGGSTKEKGTKKGKKKGRQVDCPSQLSAEDLARVPENSTSNILNRLLITYDPRIRPNFKGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLRLPQDFKSESLTVDPKMFKCLWKPDLFFANEKSANFHEVTQENILLFIFRNGDVLISMRLSVTLSCPLDLALFPMDTQRCKMQLESFGYTTDDLRFMWETGDPVQMDEIALPQFDIKQEDIEYGNCTKFYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVMLNSPKRIAAEKAKMASKEKAEGKTPGKNNTVNGTRGTPMHVSTLQVVETRCKKVCTSKSDLRTNDFSIVGSLPRDFELSNFDCYGKPIDLSGALGRSQGKHNKKLPAPKPVIPSAAKRVDLYARALFPFTFLFFNVVYWSVYL
SIO_010081: glrbb
subclass of: SO_0000673
so part of: glrbb
location: join(1457048..1457169,1458872..1458978,1460072..1460139,1462940..1463166,1464930..1465012,1465527..1465667,1467402..1467554,1469194..1469483,1471945..1472241)
location: region:1457048-1472241:1
so has part: feature:1457048-1457169:1:exon
so has part: feature:1458872-1458978:1:exon
so has part: feature:1460072-1460139:1:exon
so has part: feature:1462940-1463166:1:exon
so has part: feature:1464930-1465012:1:exon
so has part: feature:1465527-1465667:1:exon
so has part: feature:1467402-1467554:1:exon
so has part: feature:1469194-1469483:1:exon
so has part: feature:1471945-1472241:1:exon

XP_046877699.1
type: Protein
SIO_000068: ncbiprotein

position:1457048:1
position: 1457048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472241:1
position: 1472241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457048-1457169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1458872-1458978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1460072-1460139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462940-1463166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464930-1465012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465527-1465667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1467402-1467554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1469194-1469483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1471945-1472241:1:exon

gria2b
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gria2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1478358..1506719
location: region:1478358-1506719:1
so has part: feature:1478358-1506719:1:exon
subclass of: SO_0000010

124470007
type: Gene
SIO_000068: ncbigene

position:1478358:1
position: 1478358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506719:1
position: 1506719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478358-1506719:1:exon

gria2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gria2b
product: glutamate receptor, ionotropic, AMPA 2b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047023636.1
SIO_010081: gria2b
subclass of: SO_0000673
so part of: gria2b
location: join(1478358..1478696,1478828..1478968,1490714..1490953,1494943..1495139,1496414..1496467,1496584..1496742,1496925..1497092,1497386..1497490,1497748..1497855,1498009..1498215,1498628..1498995,1499722..1499920,1500091..1500338,1502213..1502327,1503934..1504068,1504651..1506719)
location: region:1478358-1506719:1
so has part: feature:1478358-1478696:1:exon
so has part: feature:1478828-1478968:1:exon
so has part: feature:1490714-1490953:1:exon
so has part: feature:1494943-1495139:1:exon
so has part: feature:1496414-1496467:1:exon
so has part: feature:1496584-1496742:1:exon
so has part: feature:1496925-1497092:1:exon
so has part: feature:1497386-1497490:1:exon
so has part: feature:1497748-1497855:1:exon
so has part: feature:1498009-1498215:1:exon
so has part: feature:1498628-1498995:1:exon
so has part: feature:1499722-1499920:1:exon
so has part: feature:1500091-1500338:1:exon
so has part: feature:1502213-1502327:1:exon
so has part: feature:1503934-1504068:1:exon
so has part: feature:1504651-1506719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478358-1478696:1:exon

position:1478696:1
position: 1478696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1478828-1478968:1:exon

position:1478828:1
position: 1478828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478968:1
position: 1478968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1490714-1490953:1:exon

position:1490714:1
position: 1490714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490953:1
position: 1490953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1494943-1495139:1:exon

position:1494943:1
position: 1494943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495139:1
position: 1495139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496414-1496467:1:exon

position:1496414:1
position: 1496414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496467:1
position: 1496467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1496584-1496742:1:exon

position:1496584:1
position: 1496584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496742:1
position: 1496742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1496925-1497092:1:exon

position:1496925:1
position: 1496925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497092:1
position: 1497092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1497386-1497490:1:exon

position:1497386:1
position: 1497386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497490:1
position: 1497490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1497748-1497855:1:exon

position:1497748:1
position: 1497748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497855:1
position: 1497855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1498009-1498215:1:exon

position:1498009:1
position: 1498009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498215:1
position: 1498215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1498628-1498995:1:exon

position:1498628:1
position: 1498628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498995:1
position: 1498995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1499722-1499920:1:exon

position:1499722:1
position: 1499722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499920:1
position: 1499920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1500091-1500338:1:exon

position:1500091:1
position: 1500091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500338:1
position: 1500338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1502213-1502327:1:exon

position:1502213:1
position: 1502213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502327:1
position: 1502327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1503934-1504068:1:exon

position:1503934:1
position: 1503934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504068:1
position: 1504068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1504651-1506719:1:exon

position:1504651:1
position: 1504651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gria2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gria2b
product: glutamate receptor, ionotropic, AMPA 2b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047023645.1
SIO_010081: gria2b
subclass of: SO_0000673
so part of: gria2b
location: join(1478371..1478696,1478828..1478968,1490714..1490953,1494943..1495139,1496414..1496467,1496584..1496742,1496925..1497092,1497386..1497490,1497748..1497855,1498009..1498215,1498628..1498995,1499722..1499920,1500091..1500338,1501589..1501703,1503934..1504068,1504651..1506719)
location: region:1478371-1506719:1
so has part: feature:1478371-1478696:1:exon
so has part: feature:1478828-1478968:1:exon
so has part: feature:1490714-1490953:1:exon
so has part: feature:1494943-1495139:1:exon
so has part: feature:1496414-1496467:1:exon
so has part: feature:1496584-1496742:1:exon
so has part: feature:1496925-1497092:1:exon
so has part: feature:1497386-1497490:1:exon
so has part: feature:1497748-1497855:1:exon
so has part: feature:1498009-1498215:1:exon
so has part: feature:1498628-1498995:1:exon
so has part: feature:1499722-1499920:1:exon
so has part: feature:1500091-1500338:1:exon
so has part: feature:1501589-1501703:1:exon
so has part: feature:1503934-1504068:1:exon
so has part: feature:1504651-1506719:1:exon

position:1478371:1
position: 1478371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478371-1478696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478828-1478968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1490714-1490953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494943-1495139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496414-1496467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496584-1496742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496925-1497092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497386-1497490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497748-1497855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1498009-1498215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1498628-1498995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1499722-1499920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500091-1500338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1501589-1501703:1:exon

position:1501589:1
position: 1501589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501703:1
position: 1501703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1503934-1504068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1504651-1506719:1:exon

gria2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gria2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 2b isoform X2
translation: MTKIMNLSVLVLLILRGMPLGGSPSVQIGGLFPRGADQEYSAFRIGMVQFGTAEFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDLNQQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQVTAINVGNLKDEKKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANLGFIDGDLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSKIRYTSALTYDAVQVMTEAFRYLQKQRIDISRRANTGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFDQHGRRVNYSVNIMELKNNGPVKIGYWNEVDKMAVTKSDIFPNETTGMENKTVIVTTILEAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQSEIAYGTLDSGSTKEFFRRSKIALFDKMWTYMRSAEPSVFVKTTAEGVLRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVTFTDAMRSKARLSITGSTGENGRVMSPEFPKAVHAVPYVRPGMGMNVSLTDLS
SIO_010081: gria2b
subclass of: SO_0000673
so part of: gria2b
location: join(1478612..1478696,1478828..1478968,1490714..1490953,1494943..1495139,1496414..1496467,1496584..1496742,1496925..1497092,1497386..1497490,1497748..1497855,1498009..1498215,1498628..1498995,1499722..1499920,1500091..1500338,1501589..1501703,1503934..1504068,1504651..1504815)
location: region:1478612-1504815:1
so has part: feature:1478612-1478696:1:exon
so has part: feature:1478828-1478968:1:exon
so has part: feature:1490714-1490953:1:exon
so has part: feature:1494943-1495139:1:exon
so has part: feature:1496414-1496467:1:exon
so has part: feature:1496584-1496742:1:exon
so has part: feature:1496925-1497092:1:exon
so has part: feature:1497386-1497490:1:exon
so has part: feature:1497748-1497855:1:exon
so has part: feature:1498009-1498215:1:exon
so has part: feature:1498628-1498995:1:exon
so has part: feature:1499722-1499920:1:exon
so has part: feature:1500091-1500338:1:exon
so has part: feature:1501589-1501703:1:exon
so has part: feature:1503934-1504068:1:exon
so has part: feature:1504651-1504815:1:exon

XP_046879601.1
type: Protein
SIO_000068: ncbiprotein

position:1478612:1
position: 1478612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504815:1
position: 1504815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478612-1478696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478828-1478968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1490714-1490953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494943-1495139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496414-1496467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496584-1496742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496925-1497092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497386-1497490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497748-1497855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1498009-1498215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1498628-1498995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1499722-1499920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500091-1500338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1501589-1501703:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1503934-1504068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1504651-1504815:1:exon

gria2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gria2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 2b isoform X1
translation: MTKIMNLSVLVLLILRGMPLGGSPSVQIGGLFPRGADQEYSAFRIGMVQFGTAEFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDLNQQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQVTAINVGNLKDEKKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANLGFIDGDLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSKIRYTSALTYDAVQVMTEAFRYLQKQRIDISRRANTGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFDQHGRRVNYSVNIMELKNNGPVKIGYWNEVDKMAVTKSDIFPNETTGMENKTVIVTTILEAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQSEIAYGTLDSGSTKEFFRRSKIALFDKMWTYMRSAEPSVFVKTTAEGVLRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVTFTDAMRSKARLSITGSTGENGRVMSPEFPKAVHAVPYVRPGMGMNVSLTDLS
SIO_010081: gria2b
subclass of: SO_0000673
so part of: gria2b
location: join(1478612..1478696,1478828..1478968,1490714..1490953,1494943..1495139,1496414..1496467,1496584..1496742,1496925..1497092,1497386..1497490,1497748..1497855,1498009..1498215,1498628..1498995,1499722..1499920,1500091..1500338,1502213..1502327,1503934..1504068,1504651..1504815)
location: region:1478612-1504815:1
so has part: feature:1478612-1478696:1:exon
so has part: feature:1478828-1478968:1:exon
so has part: feature:1490714-1490953:1:exon
so has part: feature:1494943-1495139:1:exon
so has part: feature:1496414-1496467:1:exon
so has part: feature:1496584-1496742:1:exon
so has part: feature:1496925-1497092:1:exon
so has part: feature:1497386-1497490:1:exon
so has part: feature:1497748-1497855:1:exon
so has part: feature:1498009-1498215:1:exon
so has part: feature:1498628-1498995:1:exon
so has part: feature:1499722-1499920:1:exon
so has part: feature:1500091-1500338:1:exon
so has part: feature:1502213-1502327:1:exon
so has part: feature:1503934-1504068:1:exon
so has part: feature:1504651-1504815:1:exon

XP_046879592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1478612-1478696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478828-1478968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1490714-1490953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494943-1495139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496414-1496467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496584-1496742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496925-1497092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497386-1497490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497748-1497855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1498009-1498215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1498628-1498995:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1499722-1499920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500091-1500338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1502213-1502327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1503934-1504068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1504651-1504815:1:exon

gask1b
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: gask1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1540005..1546810)
location: region:1540005-1546810:-1
so has part: feature:1540005-1546810:-1:exon
subclass of: SO_0000010

124473970
type: Gene
SIO_000068: ncbigene

position:1540005:-1
position: 1540005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546810:-1
position: 1546810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540005-1546810:-1:exon

gask1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: gask1b
product: golgi associated kinase 1B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047029812.1
SIO_010081: gask1b
subclass of: SO_0000673
so part of: gask1b
location: complement(join(1540005..1541033,1542323..1542549,1542838..1543055,1543737..1546810))
location: region:1540005-1546810:-1
so has part: feature:1543737-1546810:-1:exon
so has part: feature:1542838-1543055:-1:exon
so has part: feature:1542323-1542549:-1:exon
so has part: feature:1540005-1541033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1543737-1546810:-1:exon

position:1543737:-1
position: 1543737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1542838-1543055:-1:exon

position:1542838:-1
position: 1542838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543055:-1
position: 1543055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1542323-1542549:-1:exon

position:1542323:-1
position: 1542323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542549:-1
position: 1542549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540005-1541033:-1:exon

position:1541033:-1
position: 1541033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gask1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: gask1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi-associated kinase 1B
translation: MEICIRGDIIKYLFIWSYTSLLRIYGCIQRRPPSKRNIVIASACFVYLFFVVSQVGHFLPHQDRWTYDHKYKSIRGSSLKTDDDPFKTVYSPAGENTDIALSVVPTRSNVVYITLKSKRLKPAIIRGTVKPKLRSKTRRTKSNNYAFITQNNVANLEREVERKRTYGKDISWKAVRQIGQTSPETGNGARTIVETEPHVSSIRIYSERSPPWYSKKDIDAMRFLADGKVLHINEVSYKSFPPFLMFETTTKDSSNPSPTENDFKICRGLCGIIKRPIDTSEVFAFHLDRVLGLNKSLPAVSRRFSHFQDEQPCPVVLWDASLYPGGSEVNQSAVRLTWGQYQSTLKQRCWHRNISPKPGSSCSSIHHYEWSKLALFDFLLQIYKRLDQSCCGFRPRPQDECVELDQHAECVDEDSIALANIIYRGHDPRHLVFSDNKGFFDRDEDNLDFKLLEGIKELPEHAVGVLRSQRLRERLLQALFLDRIYWESQGGRQGIERLIDVIERRAKVLLTYINAHGVRVVPMNV
SIO_010081: gask1b
subclass of: SO_0000673
so part of: gask1b
location: complement(join(1540826..1541033,1542323..1542549,1542838..1543055,1543737..1544661))
location: region:1540826-1544661:-1
so has part: feature:1543737-1544661:-1:exon
so has part: feature:1542838-1543055:-1:exon
so has part: feature:1542323-1542549:-1:exon
so has part: feature:1540826-1541033:-1:exon

XP_046885768.1
type: Protein
SIO_000068: ncbiprotein

position:1540826:-1
position: 1540826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544661:-1
position: 1544661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543737-1544661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1542838-1543055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1542323-1542549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540826-1541033:-1:exon

tmem144b
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: tmem144b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1546288..1550062
location: region:1546288-1550062:1
so has part: feature:1546288-1550062:1:exon
subclass of: SO_0000010

124470373
type: Gene
SIO_000068: ncbigene

position:1546288:1
position: 1546288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550062:1
position: 1550062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546288-1550062:1:exon

tmem144b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: tmem144b
product: transmembrane protein 144b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047024216.1
SIO_010081: tmem144b
subclass of: SO_0000673
so part of: tmem144b
location: join(1546288..1546315,1546595..1546655,1546768..1546846,1547176..1547246,1547539..1547657,1547908..1548027,1548627..1548724,1548866..1548935,1549749..1550062)
location: region:1546288-1550062:1
so has part: feature:1546288-1546315:1:exon
so has part: feature:1546595-1546655:1:exon
so has part: feature:1546768-1546846:1:exon
so has part: feature:1547176-1547246:1:exon
so has part: feature:1547539-1547657:1:exon
so has part: feature:1547908-1548027:1:exon
so has part: feature:1548627-1548724:1:exon
so has part: feature:1548866-1548935:1:exon
so has part: feature:1549749-1550062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1546288-1546315:1:exon

position:1546315:1
position: 1546315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1546595-1546655:1:exon

position:1546595:1
position: 1546595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546655:1
position: 1546655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546768-1546846:1:exon

position:1546768:1
position: 1546768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546846:1
position: 1546846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1547176-1547246:1:exon

position:1547176:1
position: 1547176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547246:1
position: 1547246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1547539-1547657:1:exon

position:1547539:1
position: 1547539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547657:1
position: 1547657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1547908-1548027:1:exon

position:1547908:1
position: 1547908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548027:1
position: 1548027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548627-1548724:1:exon

position:1548627:1
position: 1548627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548724:1
position: 1548724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1548866-1548935:1:exon

position:1548866:1
position: 1548866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548935:1
position: 1548935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1549749-1550062:1:exon

position:1549749:1
position: 1549749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem144b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: tmem144b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 144b
translation: MLGGVMWATDPQHVSSPLLNYCGAGLCFLSGLTFFFVRTDVEAHPHAGSPLLHPDRRVRSGCEPSESWIEVIGPETKRLIGCSLATAYGLLDGLSFVPILYIKSRASCQDSIFYGASLYDPDYVYAQCCGIFLTSTVYFLIYCALMTNRPQVPSRAVLPGFASGLMWTLANYCWFLANIYLSSMVTFPIVTALFPMLGLRSGGSTLGMFGVQGDQGLGELLHPCPGLLYLPDWLHPDCFVNDAMKWRMTSH
SIO_010081: tmem144b
subclass of: SO_0000673
so part of: tmem144b
location: join(1546288..1546315,1546595..1546655,1546768..1546846,1547176..1547246,1547539..1547657,1547908..1548027,1548627..1548724,1548866..1548935,1549749..1549858)
location: region:1546288-1549858:1
so has part: feature:1546288-1546315:1:exon
so has part: feature:1546595-1546655:1:exon
so has part: feature:1546768-1546846:1:exon
so has part: feature:1547176-1547246:1:exon
so has part: feature:1547539-1547657:1:exon
so has part: feature:1547908-1548027:1:exon
so has part: feature:1548627-1548724:1:exon
so has part: feature:1548866-1548935:1:exon
so has part: feature:1549749-1549858:1:exon

XP_046880172.1
type: Protein
SIO_000068: ncbiprotein

position:1549858:1
position: 1549858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546288-1546315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1546595-1546655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546768-1546846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1547176-1547246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547539-1547657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547908-1548027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548627-1548724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1548866-1548935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1549749-1549858:1:exon

rxfp1
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: rxfp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1568888..1597310
location: region:1568888-1597310:1
so has part: feature:1568888-1597310:1:exon
subclass of: SO_0000010

124473827
type: Gene
SIO_000068: ncbigene

position:1568888:1
position: 1568888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597310:1
position: 1597310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568888-1597310:1:exon

rxfp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rxfp1
product: relaxin family peptide receptor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047029558.1
SIO_010081: rxfp1
subclass of: SO_0000673
so part of: rxfp1
location: join(1568888..1569170,1571610..1571759,1579970..1580053,1584067..1584172,1585682..1585753,1586626..1586697,1587123..1587194,1587397..1587468,1587652..1587720,1587818..1587889,1588675..1588746,1589571..1589642,1589929..1590000,1591237..1591308,1592415..1592644,1594126..1594536,1594900..1595118,1596107..1597310)
location: region:1568888-1597310:1
so has part: feature:1568888-1569170:1:exon
so has part: feature:1571610-1571759:1:exon
so has part: feature:1579970-1580053:1:exon
so has part: feature:1584067-1584172:1:exon
so has part: feature:1585682-1585753:1:exon
so has part: feature:1586626-1586697:1:exon
so has part: feature:1587123-1587194:1:exon
so has part: feature:1587397-1587468:1:exon
so has part: feature:1587652-1587720:1:exon
so has part: feature:1587818-1587889:1:exon
so has part: feature:1588675-1588746:1:exon
so has part: feature:1589571-1589642:1:exon
so has part: feature:1589929-1590000:1:exon
so has part: feature:1591237-1591308:1:exon
so has part: feature:1592415-1592644:1:exon
so has part: feature:1594126-1594536:1:exon
so has part: feature:1594900-1595118:1:exon
so has part: feature:1596107-1597310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568888-1569170:1:exon

position:1569170:1
position: 1569170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1571610-1571759:1:exon

position:1571610:1
position: 1571610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571759:1
position: 1571759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1579970-1580053:1:exon

position:1579970:1
position: 1579970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580053:1
position: 1580053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1584067-1584172:1:exon

position:1584067:1
position: 1584067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584172:1
position: 1584172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1585682-1585753:1:exon

position:1585682:1
position: 1585682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585753:1
position: 1585753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1586626-1586697:1:exon

position:1586626:1
position: 1586626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586697:1
position: 1586697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1587123-1587194:1:exon

position:1587123:1
position: 1587123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587194:1
position: 1587194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587397-1587468:1:exon

position:1587397:1
position: 1587397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587468:1
position: 1587468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1587652-1587720:1:exon

position:1587652:1
position: 1587652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587720:1
position: 1587720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1587818-1587889:1:exon

position:1587818:1
position: 1587818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587889:1
position: 1587889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1588675-1588746:1:exon

position:1588675:1
position: 1588675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588746:1
position: 1588746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1589571-1589642:1:exon

position:1589571:1
position: 1589571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589642:1
position: 1589642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1589929-1590000:1:exon

position:1589929:1
position: 1589929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590000:1
position: 1590000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1591237-1591308:1:exon

position:1591237:1
position: 1591237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591308:1
position: 1591308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1592415-1592644:1:exon

position:1592415:1
position: 1592415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592644:1
position: 1592644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1594126-1594536:1:exon

position:1594126:1
position: 1594126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594536:1
position: 1594536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1594900-1595118:1:exon

position:1594900:1
position: 1594900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595118:1
position: 1595118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1596107-1597310:1:exon

position:1596107:1
position: 1596107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rxfp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rxfp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: relaxin receptor 1
translation: MMKAMVAVFLCYGVSPMLTSFNISEEKASCPLGYFPCGNLSACLPQLLHCNGVDDCGNQADEENCGDNNGWPHLFDKYFGIPNYDLGTKSNTCLLGLVPDRCQCRDLELDCDGAQLQDVPTVAVNVTMMSLQRNRLRKLNADIFYKYQSLQKLYLQHNRIRAVSPSAFRGLYNLTRLYLSYNKISILMPGVFQDLHKLEWLILENNNIHQISSLTFSGLRSLVLLVLLNNSLTKLDDICMEMPRLNWLDMEGNLIENVENVTFCSCNMLTVLVLQRNRIRHIHEQAFSLLQKLGELDLSTNRLGAIPPNLFVYLEDLLQLNISYNPIVNLQVDHFDDLHKLKSLSIEGIEIGNIQRRMFEPLKHLTHIYFKKFQYCGYAPHVRSCKPNTDGISSFEDLLANIVLRVFVWVVSATTCFGNIFVICMRSYIRSENKLHAMCIISLCCADGLMGVYLFMIGAYDLKFRGEYNRHAQAWMDSVQCQVIGSLAMLSTEVSVLLLTYLTLEKYICIVYPFHYLTPGRRRTVSILFSIWVFGFIIAFLPLVCKGLFRNFYGTNGVCFPLHSEQPETTSAQVYSIVIFLGLNLVAFLIIVLSYGSMFYNIQRTGTQTTKYSNHIKKEVTIAKRFFSIVITDSLCWIPIFILKILSLLQVEIPGTISSWVVIFILPINSALNPILYTLTTRPFKETILQVWDNYRQRRPLLSSHAIHHPSLTWQEMWPLPENSQTLTSPEYLPNPSEVSCTTGKSQLITVESTNGV
SIO_010081: rxfp1
subclass of: SO_0000673
so part of: rxfp1
location: join(1569125..1569170,1571610..1571759,1579970..1580053,1584067..1584172,1585682..1585753,1586626..1586697,1587123..1587194,1587397..1587468,1587652..1587720,1587818..1587889,1588675..1588746,1589571..1589642,1589929..1590000,1591237..1591308,1592415..1592644,1594126..1594536,1594900..1595118,1596107..1596417)
location: region:1569125-1596417:1
so has part: feature:1569125-1569170:1:exon
so has part: feature:1571610-1571759:1:exon
so has part: feature:1579970-1580053:1:exon
so has part: feature:1584067-1584172:1:exon
so has part: feature:1585682-1585753:1:exon
so has part: feature:1586626-1586697:1:exon
so has part: feature:1587123-1587194:1:exon
so has part: feature:1587397-1587468:1:exon
so has part: feature:1587652-1587720:1:exon
so has part: feature:1587818-1587889:1:exon
so has part: feature:1588675-1588746:1:exon
so has part: feature:1589571-1589642:1:exon
so has part: feature:1589929-1590000:1:exon
so has part: feature:1591237-1591308:1:exon
so has part: feature:1592415-1592644:1:exon
so has part: feature:1594126-1594536:1:exon
so has part: feature:1594900-1595118:1:exon
so has part: feature:1596107-1596417:1:exon

XP_046885514.1
type: Protein
SIO_000068: ncbiprotein

position:1569125:1
position: 1569125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596417:1
position: 1596417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569125-1569170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571610-1571759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1579970-1580053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1584067-1584172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585682-1585753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586626-1586697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587123-1587194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587397-1587468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587652-1587720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587818-1587889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1588675-1588746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589571-1589642:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1589929-1590000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1591237-1591308:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1592415-1592644:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1594126-1594536:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1594900-1595118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1596107-1596417:1:exon

etfdh
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: etfdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598115..1605388
location: region:1598115-1605388:1
so has part: feature:1598115-1605388:1:exon
subclass of: SO_0000010

124473907
type: Gene
SIO_000068: ncbigene

position:1598115:1
position: 1598115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605388:1
position: 1605388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598115-1605388:1:exon

etfdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: etfdh
product: electron transfer flavoprotein dehydrogenase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047029680.1
SIO_010081: etfdh
subclass of: SO_0000673
so part of: etfdh
location: join(1598115..1598332,1599554..1599706,1600004..1600233,1600384..1600465,1600607..1600725,1601103..1601180,1601455..1601601,1601859..1601999,1602496..1602639,1602888..1603056,1603417..1603599,1604156..1604377,1604839..1605388)
location: region:1598115-1605388:1
so has part: feature:1598115-1598332:1:exon
so has part: feature:1599554-1599706:1:exon
so has part: feature:1600004-1600233:1:exon
so has part: feature:1600384-1600465:1:exon
so has part: feature:1600607-1600725:1:exon
so has part: feature:1601103-1601180:1:exon
so has part: feature:1601455-1601601:1:exon
so has part: feature:1601859-1601999:1:exon
so has part: feature:1602496-1602639:1:exon
so has part: feature:1602888-1603056:1:exon
so has part: feature:1603417-1603599:1:exon
so has part: feature:1604156-1604377:1:exon
so has part: feature:1604839-1605388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598115-1598332:1:exon

position:1598332:1
position: 1598332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1599554-1599706:1:exon

position:1599554:1
position: 1599554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599706:1
position: 1599706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1600004-1600233:1:exon

position:1600004:1
position: 1600004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600233:1
position: 1600233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1600384-1600465:1:exon

position:1600384:1
position: 1600384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600465:1
position: 1600465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1600607-1600725:1:exon

position:1600607:1
position: 1600607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600725:1
position: 1600725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1601103-1601180:1:exon

position:1601103:1
position: 1601103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601180:1
position: 1601180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1601455-1601601:1:exon

position:1601455:1
position: 1601455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601601:1
position: 1601601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1601859-1601999:1:exon

position:1601859:1
position: 1601859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601999:1
position: 1601999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1602496-1602639:1:exon

position:1602496:1
position: 1602496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602639:1
position: 1602639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1602888-1603056:1:exon

position:1602888:1
position: 1602888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603056:1
position: 1603056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1603417-1603599:1:exon

position:1603417:1
position: 1603417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603599:1
position: 1603599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1604156-1604377:1:exon

position:1604156:1
position: 1604156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604377:1
position: 1604377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1604839-1605388:1:exon

position:1604839:1
position: 1604839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

etfdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: etfdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial
translation: MNTMFPASRYSIQARRCIRALKYVQGEQGQHQLYVSRLRCSSSSTPRITTHYTIHPREKDLRWEGVEMERFADEADVVIVGGGPAGLSAAIRLKQLANEQEKELRVCLVEKASQIGAHTLSGACLEPSALDELFPDWKDRGAPLNTPVTEDVFGIFTEKHRIPVPMLPGLPMNNHGNYIVRLGNFVRWLGEQAEELGVEIYPGYAAAEVLFHEDGSVKGIATNDVGIAKDGSPKDVFERGMELHAKVTLFGEGCHGHLAKQLYRQFNLRENCEPQTYAIGLKEVWTVDEKKWRPGRVEHSVGWPLNRSTYGGSFLYHLNEGEPLVALGFVVGLDYSNPYLSPFREFQRWKHHPYVAATLEGGTRIAYGARALNEGGFQCLPKVTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGMLAAEAIFPKVIEERLESETAGLHVSEYEENLKKSWIWKELYAVRNIRPSFHNYFGLYGGMVYTGIFYWILRGKEPWTLKHAGLDSAQLKPAKDCQPIEYPKPDGKLSFDLLSSVALSGTNHEGDQPAHLTLKDDSIPVDRNLAIYDGPEQRFCPAGVYEYVPLESGEGMRLQINAQNCVHCKTCDIKDPSQNINWVVPEGSGGPAYNGM
SIO_010081: etfdh
subclass of: SO_0000673
so part of: etfdh
location: join(1598293..1598332,1599554..1599706,1600004..1600233,1600384..1600465,1600607..1600725,1601103..1601180,1601455..1601601,1601859..1601999,1602496..1602639,1602888..1603056,1603417..1603599,1604156..1604377,1604839..1605002)
location: region:1598293-1605002:1
so has part: feature:1598293-1598332:1:exon
so has part: feature:1599554-1599706:1:exon
so has part: feature:1600004-1600233:1:exon
so has part: feature:1600384-1600465:1:exon
so has part: feature:1600607-1600725:1:exon
so has part: feature:1601103-1601180:1:exon
so has part: feature:1601455-1601601:1:exon
so has part: feature:1601859-1601999:1:exon
so has part: feature:1602496-1602639:1:exon
so has part: feature:1602888-1603056:1:exon
so has part: feature:1603417-1603599:1:exon
so has part: feature:1604156-1604377:1:exon
so has part: feature:1604839-1605002:1:exon

XP_046885636.1
type: Protein
SIO_000068: ncbiprotein

position:1598293:1
position: 1598293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605002:1
position: 1605002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598293-1598332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1599554-1599706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600004-1600233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600384-1600465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1600607-1600725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1601103-1601180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1601455-1601601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1601859-1601999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1602496-1602639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1602888-1603056:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1603417-1603599:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1604156-1604377:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1604839-1605002:1:exon

ppid
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: ppid
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1605257..1610001)
location: region:1605257-1610001:-1
so has part: feature:1605257-1610001:-1:exon
subclass of: SO_0000010

124474042
type: Gene
SIO_000068: ncbigene

position:1605257:-1
position: 1605257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610001:-1
position: 1610001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605257-1610001:-1:exon

ppid
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: ppid
product: peptidylprolyl isomerase D
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047029932.1
SIO_010081: ppid
subclass of: SO_0000673
so part of: ppid
location: complement(join(1605257..1605996,1606264..1606306,1606830..1606916,1607222..1607363,1607684..1607790,1607989..1608111,1608445..1608633,1608874..1608980,1609155..1609295,1609818..1610001))
location: region:1605257-1610001:-1
so has part: feature:1609818-1610001:-1:exon
so has part: feature:1609155-1609295:-1:exon
so has part: feature:1608874-1608980:-1:exon
so has part: feature:1608445-1608633:-1:exon
so has part: feature:1607989-1608111:-1:exon
so has part: feature:1607684-1607790:-1:exon
so has part: feature:1607222-1607363:-1:exon
so has part: feature:1606830-1606916:-1:exon
so has part: feature:1606264-1606306:-1:exon
so has part: feature:1605257-1605996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609818-1610001:-1:exon

position:1609818:-1
position: 1609818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1609155-1609295:-1:exon

position:1609155:-1
position: 1609155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609295:-1
position: 1609295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608874-1608980:-1:exon

position:1608874:-1
position: 1608874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608980:-1
position: 1608980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1608445-1608633:-1:exon

position:1608445:-1
position: 1608445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608633:-1
position: 1608633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1607989-1608111:-1:exon

position:1607989:-1
position: 1607989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608111:-1
position: 1608111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1607684-1607790:-1:exon

position:1607684:-1
position: 1607684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607790:-1
position: 1607790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1607222-1607363:-1:exon

position:1607222:-1
position: 1607222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607363:-1
position: 1607363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1606830-1606916:-1:exon

position:1606830:-1
position: 1606830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606916:-1
position: 1606916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1606264-1606306:-1:exon

position:1606264:-1
position: 1606264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606306:-1
position: 1606306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1605257-1605996:-1:exon

position:1605996:-1
position: 1605996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppid
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: ppid
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase D
translation: MSNAVPLNKPANPTNPRVFFDVDIGGERAGRIVFELFNDIVPKTAENFRALCTGEKGIGQTTGKPLHFKGCPFHRIIKQFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKVGLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGQVLKGMGLVKLLEAVETVEDGPLKPCVIAECGEHKDGDSWGVAPSDGSGDAHPEFPDDSDIDFKDVEKVLSVAEDIKNIGNNFFKNQDWQSAIKKYSKALRYLEVCEQLDDEQTQQKLEPTAVSCILNTAACKLKLQLWQAAVDSCDEVLELNQSNTKALFRRAQGLQGLKEYSRAMIDLKKAQEIAPEDKAIGNEMKRVLLKVKEEKEKEKKIYAKMFA
SIO_010081: ppid
subclass of: SO_0000673
so part of: ppid
location: complement(join(1605908..1605996,1606264..1606306,1606830..1606916,1607222..1607363,1607684..1607790,1607989..1608111,1608445..1608633,1608874..1608980,1609155..1609295,1609818..1609902))
location: region:1605908-1609902:-1
so has part: feature:1609818-1609902:-1:exon
so has part: feature:1609155-1609295:-1:exon
so has part: feature:1608874-1608980:-1:exon
so has part: feature:1608445-1608633:-1:exon
so has part: feature:1607989-1608111:-1:exon
so has part: feature:1607684-1607790:-1:exon
so has part: feature:1607222-1607363:-1:exon
so has part: feature:1606830-1606916:-1:exon
so has part: feature:1606264-1606306:-1:exon
so has part: feature:1605908-1605996:-1:exon

XP_046885888.1
type: Protein
SIO_000068: ncbiprotein

position:1605908:-1
position: 1605908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609902:-1
position: 1609902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609818-1609902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1609155-1609295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608874-1608980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1608445-1608633:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607989-1608111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607684-1607790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1607222-1607363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1606830-1606916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1606264-1606306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1605908-1605996:-1:exon

LOC124470924
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: LOC124470924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1611173..1613175)
location: region:1611173-1613175:-1
so has part: feature:1611173-1613175:-1:exon
subclass of: SO_0000010

124470924
type: Gene
SIO_000068: ncbigene

position:1611173:-1
position: 1611173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613175:-1
position: 1613175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611173-1613175:-1:exon

LOC124470924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: LOC124470924
product: uncharacterized protein C4orf45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047025154.1
SIO_010081: LOC124470924
subclass of: SO_0000673
so part of: LOC124470924
location: complement(join(1611173..1611583,1611762..1611820,1612209..1612435,1613074..1613175))
location: region:1611173-1613175:-1
so has part: feature:1613074-1613175:-1:exon
so has part: feature:1612209-1612435:-1:exon
so has part: feature:1611762-1611820:-1:exon
so has part: feature:1611173-1611583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613074-1613175:-1:exon

position:1613074:-1
position: 1613074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1612209-1612435:-1:exon

position:1612209:-1
position: 1612209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612435:-1
position: 1612435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1611762-1611820:-1:exon

position:1611762:-1
position: 1611762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611820:-1
position: 1611820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1611173-1611583:-1:exon

position:1611583:-1
position: 1611583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124470924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: LOC124470924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf45
translation: MTNEEVREKVPQTYGQRMLFTGPDGIADYRTRFIDFPQHGIGIMSSEATSDVSYLFRASLNPIPPPLGQRCVGGVGWGLQYHQLLNSETLVSNMQIKRSEIRSALEDRVTHRYQNPWTAPPHFLDKQSAGARGRLAWTPNIYDSYSKDVNKQFLLNKVSR
SIO_010081: LOC124470924
subclass of: SO_0000673
so part of: LOC124470924
location: complement(join(1611451..1611583,1611762..1611820,1612209..1612435,1613074..1613137))
location: region:1611451-1613137:-1
so has part: feature:1613074-1613137:-1:exon
so has part: feature:1612209-1612435:-1:exon
so has part: feature:1611762-1611820:-1:exon
so has part: feature:1611451-1611583:-1:exon

XP_046881110.1
type: Protein
SIO_000068: ncbiprotein

position:1611451:-1
position: 1611451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613137:-1
position: 1613137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1613074-1613137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612209-1612435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1611762-1611820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1611451-1611583:-1:exon

rapgef2b
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1613641..1685238
location: region:1613641-1685238:1
so has part: feature:1613641-1685238:1:exon
subclass of: SO_0000010

124470879
type: Gene
SIO_000068: ncbigene

position:1613641:1
position: 1613641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685238:1
position: 1685238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1613641-1685238:1:exon

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025082.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1613641..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1613641-1685238:1
so has part: feature:1613641-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613641-1614296:1:exon

position:1614296:1
position: 1614296
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

position:1637300:1
position: 1637300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637370:1
position: 1637370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

position:1638470:1
position: 1638470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638526:1
position: 1638526
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

position:1641833:1
position: 1641833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641916:1
position: 1641916
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

position:1647961:1
position: 1647961
reference: sequence
type: ForwardStrandPosition
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position:1648036:1
position: 1648036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

position:1649839:1
position: 1649839
reference: sequence
type: ForwardStrandPosition
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position:1650006:1
position: 1650006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

position:1660234:1
position: 1660234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660365:1
position: 1660365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

position:1663576:1
position: 1663576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663753:1
position: 1663753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

position:1665394:1
position: 1665394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665530:1
position: 1665530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

position:1666517:1
position: 1666517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666675:1
position: 1666675
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

position:1666979:1
position: 1666979
reference: sequence
type: ForwardStrandPosition
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position:1667131:1
position: 1667131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

position:1667314:1
position: 1667314
reference: sequence
type: ForwardStrandPosition
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position:1667478:1
position: 1667478
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

position:1667688:1
position: 1667688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667795:1
position: 1667795
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

position:1668031:1
position: 1668031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668234:1
position: 1668234
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

position:1669336:1
position: 1669336
reference: sequence
type: ForwardStrandPosition
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position:1669444:1
position: 1669444
reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

position:1670184:1
position: 1670184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670457:1
position: 1670457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

position:1670687:1
position: 1670687
reference: sequence
type: ForwardStrandPosition
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position:1670844:1
position: 1670844
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:1671674-1671688:1:exon

position:1671674:1
position: 1671674
reference: sequence
type: ForwardStrandPosition
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position:1671688:1
position: 1671688
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:1672297-1672537:1:exon

position:1672297:1
position: 1672297
reference: sequence
type: ForwardStrandPosition
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position:1672537:1
position: 1672537
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:1673221-1673604:1:exon

position:1673221:1
position: 1673221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673604:1
position: 1673604
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:1673961-1674172:1:exon

position:1673961:1
position: 1673961
reference: sequence
type: ForwardStrandPosition
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position:1674172:1
position: 1674172
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:1674331-1674454:1:exon

position:1674331:1
position: 1674331
reference: sequence
type: ForwardStrandPosition
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position:1674454:1
position: 1674454
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

position:1676008:1
position: 1676008
reference: sequence
type: ForwardStrandPosition
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position:1676231:1
position: 1676231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

position:1676600:1
position: 1676600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676770:1
position: 1676770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

position:1677107:1
position: 1677107
reference: sequence
type: ForwardStrandPosition
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position:1677256:1
position: 1677256
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

position:1678748:1
position: 1678748
reference: sequence
type: ForwardStrandPosition
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position:1678940:1
position: 1678940
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

position:1680468:1
position: 1680468
reference: sequence
type: ForwardStrandPosition
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position:1680988:1
position: 1680988
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

position:1681235:1
position: 1681235
reference: sequence
type: ForwardStrandPosition
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position:1681522:1
position: 1681522
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1685238:1:exon

position:1682736:1
position: 1682736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025075.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1613641..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1613641-1685238:1
so has part: feature:1613641-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
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so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
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so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613641-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674916-1674939:1:exon

position:1674916:1
position: 1674916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674939:1
position: 1674939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1685238:1:exon

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025091.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1613641..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1613641-1685238:1
so has part: feature:1613641-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613641-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1682736-1685238:1:exon

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025099.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1613641..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1613641-1685238:1
so has part: feature:1613641-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
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so has part: feature:1649839-1650006:1:exon
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so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613641-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1685238:1:exon

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025066.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1613660..1613734,1613856..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1613660-1685238:1
so has part: feature:1613660-1613734:1:exon
so has part: feature:1613856-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

position:1613660:1
position: 1613660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1613660-1613734:1:exon

position:1613734:1
position: 1613734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613856-1614296:1:exon

position:1613856:1
position: 1613856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1682736-1685238:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X1
translation: MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAASLRRGCECIVLEPSEMIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1614228..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1614228-1682761:1
so has part: feature:1614228-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881022.1
type: Protein
SIO_000068: ncbiprotein

position:1614228:1
position: 1614228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682761:1
position: 1682761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614228-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1682736-1682761:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X3
translation: MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAASLRRGCECIVLEPSEMIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1614228..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1614228-1682761:1
so has part: feature:1614228-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1614228-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1682761:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X2
translation: MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAASLRRGCECIVLEPSEMIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPDMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1614228..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1614228-1682761:1
so has part: feature:1614228-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1614228-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1682761:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X4
translation: MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAASLRRGCECIVLEPSEMIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPDMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1614228..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1614228-1682761:1
so has part: feature:1614228-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1614228-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1682736-1682761:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X5
translation: MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEANEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAASLRRGCECIVLEPSEMIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1614228..1614296,1637300..1637370,1638470..1638526,1641833..1641916,1647961..1648036,1649839..1650006,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1614228-1682761:1
so has part: feature:1614228-1614296:1:exon
so has part: feature:1637300-1637370:1:exon
so has part: feature:1638470-1638526:1:exon
so has part: feature:1641833-1641916:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1614228-1614296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637300-1637370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1638470-1638526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1641833-1641916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1682736-1682761:1:exon

rapgef2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: rapgef2b
product: Rap guanine nucleotide exchange factor 2b, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047025108.1
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1643962..1644188,1647961..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1685238)
location: region:1643962-1685238:1
so has part: feature:1643962-1644188:1:exon
so has part: feature:1647961-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1685238:1:exon

position:1643962:1
position: 1643962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1643962-1644188:1:exon

position:1644188:1
position: 1644188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647961-1648036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1682736-1685238:1:exon

rapgef2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: rapgef2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 2 isoform X6
translation: MIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPLARGYHTLPADFSRLHLADGLHPQVTHVSSSQSGCSITSDSGSSSLSDIYQATENDQGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGAVEVTCPEGRAEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQEYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGHKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDHAMTRFLEEFENNLEREKMCGHLRLLNIACAAKAKARLVTLTKPSREAPLAFSLLGGSEKGFRVFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQLTKANEILRNNTHLSITVKTNLLVFKELLSRPEHDQEAEGEEEDRKNGAPHLPKIGDIKKASRFSIPDLAVDVEQVMGLEKVSKKAKANTVGGRNKLKKIFDKTLTSILPPKPYNDVGVGQSQDDSIVGLKQSKQVPPALPVSGNLSSSNPDLLQSHHRILDFTNQPAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVVQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCAIEPTEYMDDLFKLRSKTGSASLKRFEEAINLETFWVASEVTREPNQLKRMKTIKHFVKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMGSVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLNLETNEDSLHTLSMLCEPSINTLPKSSGDRKRPDTSPVVSRAASQQRGQLTKSGQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASERQKRQPDDAASNSSPQLSSPLTSPHSSPKKGYPRMADSYSDSGHSEISSRSSLVSNSSLDMAQEERRLRGLGEAHAGGPRLERRATTDPDQYSLGSYSSVHECRGLYAGCPTVMSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGCLGGLPHGGPEALLGGPAGLWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADGETSSITSTGSEDAKQGRPSPSPITTGGKGLLSRKESRYRDPPPTPPGYTALTVSDFPETQQPSPSAPPSQPARRPPDYTTALQRSRMVTQSPDSHLHAQQGGSRQRATGVPRARSAGEDHEPEEEEEEDEQVSAV
SIO_010081: rapgef2b
subclass of: SO_0000673
so part of: rapgef2b
location: join(1648028..1648036,1649839..1650006,1660234..1660365,1663576..1663753,1665394..1665530,1666517..1666675,1666979..1667131,1667314..1667478,1667688..1667795,1668031..1668234,1669336..1669444,1670184..1670457,1670687..1670844,1671674..1671688,1672297..1672537,1673221..1673604,1673961..1674172,1674331..1674454,1674916..1674939,1676008..1676231,1676600..1676770,1677107..1677256,1678748..1678940,1680468..1680988,1681235..1681522,1682736..1682761)
location: region:1648028-1682761:1
so has part: feature:1648028-1648036:1:exon
so has part: feature:1649839-1650006:1:exon
so has part: feature:1660234-1660365:1:exon
so has part: feature:1663576-1663753:1:exon
so has part: feature:1665394-1665530:1:exon
so has part: feature:1666517-1666675:1:exon
so has part: feature:1666979-1667131:1:exon
so has part: feature:1667314-1667478:1:exon
so has part: feature:1667688-1667795:1:exon
so has part: feature:1668031-1668234:1:exon
so has part: feature:1669336-1669444:1:exon
so has part: feature:1670184-1670457:1:exon
so has part: feature:1670687-1670844:1:exon
so has part: feature:1671674-1671688:1:exon
so has part: feature:1672297-1672537:1:exon
so has part: feature:1673221-1673604:1:exon
so has part: feature:1673961-1674172:1:exon
so has part: feature:1674331-1674454:1:exon
so has part: feature:1674916-1674939:1:exon
so has part: feature:1676008-1676231:1:exon
so has part: feature:1676600-1676770:1:exon
so has part: feature:1677107-1677256:1:exon
so has part: feature:1678748-1678940:1:exon
so has part: feature:1680468-1680988:1:exon
so has part: feature:1681235-1681522:1:exon
so has part: feature:1682736-1682761:1:exon

XP_046881064.1
type: Protein
SIO_000068: ncbiprotein

position:1648028:1
position: 1648028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1648028-1648036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1649839-1650006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660234-1660365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1663576-1663753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1665394-1665530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1666517-1666675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666979-1667131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1667314-1667478:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667688-1667795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1668031-1668234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669336-1669444:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1670184-1670457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1670687-1670844:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1671674-1671688:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1672297-1672537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1673221-1673604:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1673961-1674172:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1674331-1674454:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1674916-1674939:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1676008-1676231:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1676600-1676770:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1677107-1677256:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1678748-1678940:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1680468-1680988:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1681235-1681522:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1682736-1682761:1:exon

fstl5
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: fstl5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1746352..1827560)
location: region:1746352-1827560:-1
so has part: feature:1746352-1827560:-1:exon
subclass of: SO_0000010

124462144
type: Gene
SIO_000068: ncbigene

position:1746352:-1
position: 1746352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827560:-1
position: 1827560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746352-1827560:-1:exon

fstl5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: fstl5
product: follistatin-like 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047021551.1
SIO_010081: fstl5
subclass of: SO_0000673
so part of: fstl5
location: complement(join(1746352..1748645,1752761..1752885,1753935..1754042,1755939..1756112,1759576..1759666,1760264..1760607,1765657..1765777,1771352..1771518,1780131..1780251,1783348..1783544,1799360..1799608,1809254..1809284,1816338..1816479,1827319..1827560))
location: region:1746352-1827560:-1
so has part: feature:1827319-1827560:-1:exon
so has part: feature:1816338-1816479:-1:exon
so has part: feature:1809254-1809284:-1:exon
so has part: feature:1799360-1799608:-1:exon
so has part: feature:1783348-1783544:-1:exon
so has part: feature:1780131-1780251:-1:exon
so has part: feature:1771352-1771518:-1:exon
so has part: feature:1765657-1765777:-1:exon
so has part: feature:1760264-1760607:-1:exon
so has part: feature:1759576-1759666:-1:exon
so has part: feature:1755939-1756112:-1:exon
so has part: feature:1753935-1754042:-1:exon
so has part: feature:1752761-1752885:-1:exon
so has part: feature:1746352-1748645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1827319-1827560:-1:exon

position:1827319:-1
position: 1827319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1816338-1816479:-1:exon

position:1816338:-1
position: 1816338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816479:-1
position: 1816479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1809254-1809284:-1:exon

position:1809254:-1
position: 1809254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809284:-1
position: 1809284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1799360-1799608:-1:exon

position:1799360:-1
position: 1799360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799608:-1
position: 1799608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1783348-1783544:-1:exon

position:1783348:-1
position: 1783348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783544:-1
position: 1783544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1780131-1780251:-1:exon

position:1780131:-1
position: 1780131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780251:-1
position: 1780251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1771352-1771518:-1:exon

position:1771352:-1
position: 1771352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771518:-1
position: 1771518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1765657-1765777:-1:exon

position:1765657:-1
position: 1765657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765777:-1
position: 1765777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1760264-1760607:-1:exon

position:1760264:-1
position: 1760264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760607:-1
position: 1760607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1759576-1759666:-1:exon

position:1759576:-1
position: 1759576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759666:-1
position: 1759666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1755939-1756112:-1:exon

position:1755939:-1
position: 1755939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756112:-1
position: 1756112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1753935-1754042:-1:exon

position:1753935:-1
position: 1753935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754042:-1
position: 1754042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1752761-1752885:-1:exon

position:1752761:-1
position: 1752761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752885:-1
position: 1752885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1746352-1748645:-1:exon

position:1748645:-1
position: 1748645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fstl5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 137520
gene: fstl5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1760392..1760394),aa:OTHER)
transl except: (pos:complement(1760305..1760307),aa:OTHER)
product: LOW QUALITY PROTEIN: follistatin-related protein 5
translation: MLCVWTYRNIPMRTPRCWSLAVFLLGIVLPSAEARPNQEGLGQLPYRPVVRFRHKDGNQGTLHIKGFMGHGGVAGPCEHKYCGLGRHCEVSRETGLGECRCLDSCKPHYKPVCGSDGKLYQNHCELHRASCVGGQRITIMHSEECFYKDDNCRLSDYRGLKNKILDLYDQRYMGSGNNGGHKDNMAARKQLVDVIFKRFDADSSGRVDSSELSQVIKQEGLSKGVSECTLFDLLKYNDINGDESLAKDEFYKAFEVFQLRLPDDQRLSVTTVTVGQSAVLTCAITGEHRPPIMWKRNDQVLNTLDLEDINDFGDDGSLYITKVTTTHMGNYSCYGDGYEQLSQTHMLQVNVPPVIRVYPESQAREPGVTASLRCHADGVPEPQLSWLKNGMDITTKLSKQLTLQGETHPAPRCHYHTRKLSXETYLGDTLRRLVKETCLGDWFKRLNNLLXYLKNNLIFNTCVCVXYEDGIKVIQPVACEIQRHIKPSEKLLGLQEEVCPQSAGETEQNTQTTHRQSCVWSSAVNVKDKFIYVTQPTLGRVLIVDIQSQKAVQTVNTDPFPVKLHYDKSHDQVWVLSWGNADKNFPTLQVVNQASGSMPHHTIHTQPLGRRFDRVDDFFIPATSLIINHIRFGIILHRNEPALHKIDLETTSYVRNISLRQFNCVPHSLAYSPLGGYYFVNCRPDSTGATQPQLIVDGVTDAVIGQNRDVTGTPYVSPDGRHVVTVDDRDGLMRIQTITERGEIQDPFDIHTNLHLSHLAFQPSFTEAHQYNVFGSSGRQTDALFVELSSGKVKMIKSLKEAIKPSDWPWSSRNRVVEGSGLFGQYLMTPSRESLFILDGRLNKLNCEITDVVKGNVVAWVGES
SIO_010081: fstl5
subclass of: SO_0000673
so part of: fstl5
location: complement(join(1747943..1748645,1752761..1752885,1753935..1754042,1755939..1756112,1759576..1759666,1760264..1760607,1765657..1765777,1771352..1771518,1780131..1780251,1783348..1783544,1799360..1799608,1809254..1809284,1816338..1816479,1827319..1827341))
location: region:1747943-1827341:-1
so has part: feature:1827319-1827341:-1:exon
so has part: feature:1816338-1816479:-1:exon
so has part: feature:1809254-1809284:-1:exon
so has part: feature:1799360-1799608:-1:exon
so has part: feature:1783348-1783544:-1:exon
so has part: feature:1780131-1780251:-1:exon
so has part: feature:1771352-1771518:-1:exon
so has part: feature:1765657-1765777:-1:exon
so has part: feature:1760264-1760607:-1:exon
so has part: feature:1759576-1759666:-1:exon
so has part: feature:1755939-1756112:-1:exon
so has part: feature:1753935-1754042:-1:exon
so has part: feature:1752761-1752885:-1:exon
so has part: feature:1747943-1748645:-1:exon

XP_046877507.1
type: Protein
SIO_000068: ncbiprotein

position:1747943:-1
position: 1747943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827341:-1
position: 1827341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1827319-1827341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1816338-1816479:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1809254-1809284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799360-1799608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1783348-1783544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1780131-1780251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1771352-1771518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1765657-1765777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1760264-1760607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1759576-1759666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1755939-1756112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1753935-1754042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1752761-1752885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1747943-1748645:-1:exon

qdpra
type: Gene
subclass of: SO_0000704
RO_0002162: 137520
gene: qdpra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1832208..1839350
location: region:1832208-1839350:1
so has part: feature:1832208-1839350:1:exon
subclass of: SO_0000010

124468163
type: Gene
SIO_000068: ncbigene

position:1832208:1
position: 1832208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1839350:1
position: 1839350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832208-1839350:1:exon

qdpra
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 137520
gene: qdpra
product: quinoid dihydropteridine reductase a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_047020779.1
SIO_010081: qdpra
subclass of: SO_0000673
so part of: qdpra
location: join(1832208..1832286,1832745..1832906,1833207..1833299,1833613..1833709,1833924..1834064,1836078..1836186,1838176..1838259,1839173..1839350)
location: region:1832208-1839350:1
so has part: feature:1832208-1832286:1:exon
so has part: feature:1832745-1832906:1:exon
so has part: feature:1833207-1833299:1:exon
so has part: feature:1833613-1833709:1:exon
so has part: feature:1833924-1834064:1:exon
so has part: feature:1836078-1836186:1:exon
so has part: feature:1838176-1838259:1:exon
so has part: feature:1839173-1839350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1832208-1832286:1:exon

position:1832286:1
position: 1832286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1832745-1832906:1:exon

position:1832745:1
position: 1832745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832906:1
position: 1832906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1833207-1833299:1:exon

position:1833207:1
position: 1833207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833299:1
position: 1833299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1833613-1833709:1:exon

position:1833613:1
position: 1833613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833709:1
position: 1833709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1833924-1834064:1:exon

position:1833924:1
position: 1833924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834064:1
position: 1834064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition