Lactococcus raffinolactis strain WiKim0068 plasmid pWiKim0068-1, complete sequence.
type: Entry
definition: Lactococcus raffinolactis strain WiKim0068 plasmid pWiKim0068-1, complete sequence.
sequence version: NZ_CP023393.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP023393.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07627433
keyword: RefSeq
source: Lactococcus raffinolactis
organism: Lactococcus raffinolactis
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP023393.1.\nBacteria and source DNA available from World Institute of Kimchi.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nSequencing Technology :: PacBio\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 02:34:29\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,283\nCDSs (total) :: 2,212\nGenes (coding) :: 2,161\nCDSs (with protein) :: 2,161\nGenes (RNA) :: 71\nrRNAs :: 5, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 51\nCDSs (without protein) :: 51\nPseudo Genes (ambiguous residues) :: 0 of 51\nPseudo Genes (frameshifted) :: 15 of 51\nPseudo Genes (incomplete) :: 33 of 51\nPseudo Genes (internal stop) :: 13 of 51\nPseudo Genes (multiple problems) :: 10 of 51\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 47753
topology: circular
so has quality: SO_0000988
location: 1..47753
location: region:1-47753:1
RO_0002162: 1366

NZ_CP023393
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07627433
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Lactococcus raffinolactis WiKim0068
author: Jung, M.Y.
author: Lee, S.H.
journal: Unpublished

2
title: Direct Submission
author: Jung, M.Y.
author: Lee, S.H.
journal: Submitted (11-SEP-2017) Microbiology and Functionality Research Group, World Institute of Kimchi, 86 Kimchi-Ro, Nam-Gu, Gwangju 61755, Republic of Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47753:1
position: 47753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47753:1:source
so part of: sequence
organism: Lactococcus raffinolactis
mol type: genomic DNA
strain: WiKim0068
isolation source: kimchi
plasmid: pWiKim0068-1
country: South Korea:Gwangju
collection date: 2017-02-01

1366
type: Taxonomy
SIO_000068: taxonomy

CMV25_RS10905
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10905
old locus tag: CMV25_10905
pseudo: true
so part of: sequence
location: complement(93..764)
location: region:93-764:-1
so has part: feature:93-764:-1:exon
subclass of: SO_0000010

47269136
type: Gene
SIO_000068: ncbigene

position:93:-1
position: 93
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764:-1
position: 764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93-764:-1:exon

CMV25_RS10905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10905
old locus tag: CMV25_10905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010868911.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: CMV25_RS10905
subclass of: SO_0000673
so part of: CMV25_RS10905
location: complement(93..764)
location: region:93-764:-1
so has part: feature:93-764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93-764:-1:exon

CMV25_RS10910
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10910
old locus tag: CMV25_10910
so part of: sequence
location: 902..1951
location: region:902-1951:1
so has part: feature:902-1951:1:exon
subclass of: SO_0000010

47269137
type: Gene
SIO_000068: ncbigene

position:902:1
position: 902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951:1
position: 1951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902-1951:1:exon

CMV25_RS10910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10910
old locus tag: CMV25_10910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000126416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF389 domain-containing protein
translation: MTGNYSTREYREKLYDDLHVRLSDTVILMCAIFIASIGLNMNSTAVIVGAMLISPLMTPIVGLGFGLAIFDTRLIKQSLEVLFTEVLVSLLVSTLYFWISPLSYASSELIARTSPTIWDVVIAIAGGIAGVIGSRKKEANNIVPGVAIATALMPPICTAGYGLANGNVRYLFGALYLFLINCVFIMLTNIIGTRILMRKSPLSSFKELNIKMRIGLIFLIVLLVLPASYSAVTLTMDQARKEGIKQFVGKEFANHTVINQLYKSRNNELVLTVVGDPISKEELETIRQKQASYGIQSVQLKVNQVHNSTKLDSETTKEFYENIDKYIDQKLSEKNSQNDLVKEIEADKD
SIO_010081: CMV25_RS10910
subclass of: SO_0000673
so part of: CMV25_RS10910
location: 902..1951
location: region:902-1951:1
so has part: feature:902-1951:1:exon

WP_096040553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902-1951:1:exon

CMV25_RS10915
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10915
old locus tag: CMV25_10915
pseudo: true
so part of: sequence
location: complement(2083..2763)
location: region:2083-2763:-1
so has part: feature:2083-2763:-1:exon
subclass of: SO_0000010

47269138
type: Gene
SIO_000068: ncbigene

position:2083:-1
position: 2083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763:-1
position: 2763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2083-2763:-1:exon

CMV25_RS10915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10915
old locus tag: CMV25_10915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477736.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6-like element ISS1N family transposase
SIO_010081: CMV25_RS10915
subclass of: SO_0000673
so part of: CMV25_RS10915
location: complement(2083..2763)
location: region:2083-2763:-1
so has part: feature:2083-2763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2083-2763:-1:exon

CMV25_RS10920
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10920
old locus tag: CMV25_10920
so part of: sequence
location: complement(2949..3629)
location: region:2949-3629:-1
so has part: feature:2949-3629:-1:exon
subclass of: SO_0000010

47269139
type: Gene
SIO_000068: ncbigene

position:2949:-1
position: 2949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3629:-1
position: 3629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949-3629:-1:exon

CMV25_RS10920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10920
old locus tag: CMV25_10920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTKIYRWVQEYGKLLYQIWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
SIO_010081: CMV25_RS10920
subclass of: SO_0000673
so part of: CMV25_RS10920
location: complement(2949..3629)
location: region:2949-3629:-1
so has part: feature:2949-3629:-1:exon

WP_096040554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2949-3629:-1:exon

CMV25_RS10925
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10925
old locus tag: CMV25_10925
so part of: sequence
location: complement(3767..5242)
location: region:3767-5242:-1
so has part: feature:3767-5242:-1:exon
subclass of: SO_0000010

47269140
type: Gene
SIO_000068: ncbigene

position:3767:-1
position: 3767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5242:-1
position: 5242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3767-5242:-1:exon

CMV25_RS10925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10925
old locus tag: CMV25_10925
EC number: 3.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015426478.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-amylase
translation: MKTILQAFEWYLPSDSQHWNNIKENIPDLKKLGFSGLWLPPASKAASGVEDVGYGTYDLFDLGEFDQKGTIPTKYGTKDEYLDLINKLHHNNIEVYADIVFNHMMGADETETIEADIKAEDNHLHNIENNKTVEVWTKFTFPGRQGKYDNYIWTWHNFTGIDYDERKNQEEILEFEGHEWDENVDSENNNFDYLMGADLDFTVSETVEQLEKWGHWFSEMTKIDGFRLDAIKHIDFKYFDKWLEQRAKQLDKKLFIVGEYWSEDLGKLEYYLEQSGDKIQLFDVPLHFNLKEASSTNGEFDMRTLFDHTLTASQPELSVTFVDNHDTQEGQALQSWIPAWFKEHAYSLILLRKKGTPTVFWGDLYGIPSHNVNPVGDNLRTMIALRKGSEFLRENDYFDHPDIIGWTNILKIDNKEYGLSCILTNKNGGSKYMIIDKAYAGKVYIDLFGRHEIPITLDQNGGAEFYVNDGSVSVWVDKEIVSKIDQMNFQN
SIO_010081: CMV25_RS10925
subclass of: SO_0000673
so part of: CMV25_RS10925
location: complement(3767..5242)
location: region:3767-5242:-1
so has part: feature:3767-5242:-1:exon

WP_096040555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3767-5242:-1:exon

CMV25_RS10930
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10930
old locus tag: CMV25_10930
pseudo: true
so part of: sequence
location: 5510..>5734
location: region:5510-5734:1
so has part: feature:5510-5734:1:exon
subclass of: SO_0000010

47269141
type: Gene
SIO_000068: ncbigene

position:5510:1
position: 5510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5734:1
position: 5734
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510-5734:1:exon

CMV25_RS10930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10930
old locus tag: CMV25_10930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017370594.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: CMV25_RS10930
subclass of: SO_0000673
so part of: CMV25_RS10930
location: 5510..>5734
location: region:5510-5734:1
so has part: feature:5510-5734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510-5734:1:exon

CMV25_RS10935
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10935
old locus tag: CMV25_10935
pseudo: true
so part of: sequence
location: <5734..6183
location: region:5734-6183:1
so has part: feature:5734-6183:1:exon
subclass of: SO_0000010

47269142
type: Gene
SIO_000068: ncbigene

position:6183:1
position: 6183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5734-6183:1:exon

CMV25_RS10935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10935
old locus tag: CMV25_10935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014011543.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: CMV25_RS10935
subclass of: SO_0000673
so part of: CMV25_RS10935
location: <5734..6183
location: region:5734-6183:1
so has part: feature:5734-6183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5734-6183:1:exon

CMV25_RS10940
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10940
old locus tag: CMV25_10940
so part of: sequence
location: 6431..6670
location: region:6431-6670:1
so has part: feature:6431-6670:1:exon
subclass of: SO_0000010

47269143
type: Gene
SIO_000068: ncbigene

position:6431:1
position: 6431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6670:1
position: 6670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6431-6670:1:exon

CMV25_RS10940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10940
old locus tag: CMV25_10940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011835140.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPSIVGAVIVVAVVSFVLSKMN
SIO_010081: CMV25_RS10940
subclass of: SO_0000673
so part of: CMV25_RS10940
location: 6431..6670
location: region:6431-6670:1
so has part: feature:6431-6670:1:exon

WP_015426469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6431-6670:1:exon

CMV25_RS10945
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10945
old locus tag: CMV25_10945
so part of: sequence
location: 6743..6982
location: region:6743-6982:1
so has part: feature:6743-6982:1:exon
subclass of: SO_0000010

47269144
type: Gene
SIO_000068: ncbigene

position:6743:1
position: 6743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982:1
position: 6982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6743-6982:1:exon

CMV25_RS10945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10945
old locus tag: CMV25_10945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011835140.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MIWSLIVGALIGLIAGAITNKGSSMGWIANISAGLVGSFVGQALLGTWGPSLAGMALIPSIVGAVIVVAVVSFVLSKMN
SIO_010081: CMV25_RS10945
subclass of: SO_0000673
so part of: CMV25_RS10945
location: 6743..6982
location: region:6743-6982:1
so has part: feature:6743-6982:1:exon

WP_047916768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6743-6982:1:exon

CMV25_RS10950
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: amaP
locus tag: CMV25_RS10950
old locus tag: CMV25_10950
so part of: sequence
location: 7012..7572
location: region:7012-7572:1
so has part: feature:7012-7572:1:exon
subclass of: SO_0000010

47269145
type: Gene
SIO_000068: ncbigene

position:7012:1
position: 7012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7572:1
position: 7572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7012-7572:1:exon

CMV25_RS10950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: amaP
locus tag: CMV25_RS10950
old locus tag: CMV25_10950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003131013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkaline shock response membrane anchor protein AmaP
translation: MATGKKIILIILDLLLLTLVLPMTWDYYNFMEYDWITTTSSNIPFIGKYMIDYLFWGNIVLTVILIIALIVVLFYPRTYMDVQLTSNNGVLTLKKSAIEGFVGEKVKENDYLKNSKIAVSLFKNKIKIDIKGEIVPRVEVAQKAQVLEQEIIEGLKSFFGLEHTVKLKVKVNTLSKDDNPKRQRVM
SIO_010081: CMV25_RS10950
subclass of: SO_0000673
so part of: CMV25_RS10950
location: 7012..7572
location: region:7012-7572:1
so has part: feature:7012-7572:1:exon

WP_047916767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7012-7572:1:exon

CMV25_RS10955
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10955
old locus tag: CMV25_10955
so part of: sequence
location: 7582..7770
location: region:7582-7770:1
so has part: feature:7582-7770:1:exon
subclass of: SO_0000010

47269146
type: Gene
SIO_000068: ncbigene

position:7582:1
position: 7582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7770:1
position: 7770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7582-7770:1:exon

CMV25_RS10955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10955
old locus tag: CMV25_10955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011835142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2273 domain-containing protein
translation: MDYFEKNRYPIIGAIVGALIAVCIFTIGFWKMILVLFLIGLGIYIGLFLKKSGIIDQFIDRK
SIO_010081: CMV25_RS10955
subclass of: SO_0000673
so part of: CMV25_RS10955
location: 7582..7770
location: region:7582-7770:1
so has part: feature:7582-7770:1:exon

WP_047916766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7582-7770:1:exon

CMV25_RS10960
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10960
old locus tag: CMV25_10960
so part of: sequence
location: 7791..8342
location: region:7791-8342:1
so has part: feature:7791-8342:1:exon
subclass of: SO_0000010

47269147
type: Gene
SIO_000068: ncbigene

position:7791:1
position: 7791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8342:1
position: 8342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7791-8342:1:exon

CMV25_RS10960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10960
old locus tag: CMV25_10960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004256348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp23/Gls24 family envelope stress response protein
translation: MVQENMKAFGTMAEKETPKTKETQPEIKGALTYEDKVVQKIVGLALESVDGLLSVEGGFFSNLTGKLVNTDNVTTGVDVEVGKTQVAVDLKVVTEYRKSVPDIYEKIKEVIRKEVAAMTELEVVEVNVTVTDIKTKEQQKEDDVSIQDRVTSAAQTTGKFTSEQVDKVKDKVEDNTNKEARVK
SIO_010081: CMV25_RS10960
subclass of: SO_0000673
so part of: CMV25_RS10960
location: 7791..8342
location: region:7791-8342:1
so has part: feature:7791-8342:1:exon

WP_096040556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7791-8342:1:exon

CMV25_RS10965
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10965
old locus tag: CMV25_10965
so part of: sequence
location: 8827..9102
location: region:8827-9102:1
so has part: feature:8827-9102:1:exon
subclass of: SO_0000010

47269148
type: Gene
SIO_000068: ncbigene

position:8827:1
position: 8827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9102:1
position: 9102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8827-9102:1:exon

CMV25_RS10965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10965
old locus tag: CMV25_10965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKEVKDIRYNVRMTRQTFDIVDSFEGNSFTSKFETLVEHSYIEKIRIDTEIHESQMKLDQLKKEISEMRDIKNKLNQIERYIDSAIYSSQ
SIO_010081: CMV25_RS10965
subclass of: SO_0000673
so part of: CMV25_RS10965
location: 8827..9102
location: region:8827-9102:1
so has part: feature:8827-9102:1:exon

WP_096040557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8827-9102:1:exon

CMV25_RS10970
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10970
old locus tag: CMV25_10970
so part of: sequence
location: 9237..9824
location: region:9237-9824:1
so has part: feature:9237-9824:1:exon
subclass of: SO_0000010

47269149
type: Gene
SIO_000068: ncbigene

position:9237:1
position: 9237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9824:1
position: 9824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9237-9824:1:exon

CMV25_RS10970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10970
old locus tag: CMV25_10970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017865271.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQNLDRQLQALESVSKVFSDKVSGATTERPQLQAMLDYIREGDIVVVAELDRLGRNNKDLTDIMNIIQQKGATLEVLNLPSMSGIEDDNLRRLINNLVIELYKYQAESDRKRIKERQAQGIALAKEKGKFKGRKLKFTENDPRLQLAFKLYIQGTTEKDVERQTGINRRTFQRYRQKYDIHRK
SIO_010081: CMV25_RS10970
subclass of: SO_0000673
so part of: CMV25_RS10970
location: 9237..9824
location: region:9237-9824:1
so has part: feature:9237-9824:1:exon

WP_096040558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9237-9824:1:exon

CMV25_RS10975
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10975
old locus tag: CMV25_10975
so part of: sequence
location: 9933..10601
location: region:9933-10601:1
so has part: feature:9933-10601:1:exon
subclass of: SO_0000010

47269150
type: Gene
SIO_000068: ncbigene

position:9933:1
position: 9933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10601:1
position: 10601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9933-10601:1:exon

CMV25_RS10975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10975
old locus tag: CMV25_10975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017865329.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKNILLVDDEQRMLDLLGLYLEGDIYHCEKEISGVQAIKRVAKGNFDLILLDVMMPDLDGWTVCKNIREFSEIPIIMLTARGQNTDVSFGLKNGADDYITKPFDETILLARIEAILRRTSLSDKIDFKNLSLDKEKFQIWINQKLLEVTPIEFNLLDMFLTHQNHVFSREQIIEHIWGLTADVDNRTVDSHIRNLREKMRKESFDVDSFLLTVYGVGYKWQK
SIO_010081: CMV25_RS10975
subclass of: SO_0000673
so part of: CMV25_RS10975
location: 9933..10601
location: region:9933-10601:1
so has part: feature:9933-10601:1:exon

WP_011669094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9933-10601:1:exon

CMV25_RS10980
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10980
old locus tag: CMV25_10980
so part of: sequence
location: 10589..11983
location: region:10589-11983:1
so has part: feature:10589-11983:1:exon
subclass of: SO_0000010

47269151
type: Gene
SIO_000068: ncbigene

position:10589:1
position: 10589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11983:1
position: 11983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10589-11983:1:exon

CMV25_RS10980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10980
old locus tag: CMV25_10980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011669095.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MAKIKKLKKKISMKIGGSFFTVVVAIELALFISLYLLIVNTWVREEVDSVVAQGDNHALVLSGDFSTETIEHVVLMEEGSSQTAIVVQDSYGKTIKSSQTINSEMKKHISALKNEEKNKKESLHYHWLGDKYIVSKASIQSNGNIVGSVYMFLSTKQIQNMVFNFTGIFAVLAVITLVVTAFAIFYITRTVTRPLIEIKLGTDKIAQGDLSIRLDVNAEDELGELAKSIEELAEKLDFMKRERNEFLSSVAHELRTPLTFIKGYADIANRSTTSLEDKTQYLRIIREESRHLTQLMEDLMNLAQLEENGFKVEKHQVLIQELINEVVSKVSGVFSEKRINFLISGEGNFYANIDFMRIEQVLVNLLMNAYKYSADESDIKLAFIPEKENFKIVISDKGEGIPEQDLPYIFERFYRVDKSRTRTTGGVGLGLAIVQDIVKKHNGKIIVESIQNQGTTFIIELPYS
SIO_010081: CMV25_RS10980
subclass of: SO_0000673
so part of: CMV25_RS10980
location: 10589..11983
location: region:10589-11983:1
so has part: feature:10589-11983:1:exon

WP_096040559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10589-11983:1:exon

CMV25_RS10985
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: lgt
locus tag: CMV25_RS10985
old locus tag: CMV25_10985
so part of: sequence
location: 12165..12977
location: region:12165-12977:1
so has part: feature:12165-12977:1:exon
subclass of: SO_0000010

47269152
type: Gene
SIO_000068: ncbigene

position:12165:1
position: 12165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12977:1
position: 12977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12165-12977:1:exon

CMV25_RS10985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: lgt
locus tag: CMV25_RS10985
old locus tag: CMV25_10985
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017865327.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MISLTINKIAFEIGPLMIRWYAVLIVGGAAIGTWLAYKEAPYRHLTGDDLIDFVIWAVPSGLVGARFYYVIFNWSYYSKYPNEIIALWNGGGAIYGSLIAGTIVLFIFSYYRMVNPMDILDVAVPAVFLGQSIGRWGNFVNKEAYGKKVENLDWLPSFIQNQMYIDGSYRNPTFLFESFGTLIGFILVIIFRHRLKSILRGEIFGFYLIWYGSIRLIVEGMRTDSLMLGMLRVSQILSLILVLIGFCFIIYRRFKIKNIEFYNLSQGEQK
SIO_010081: CMV25_RS10985
subclass of: SO_0000673
so part of: CMV25_RS10985
location: 12165..12977
location: region:12165-12977:1
so has part: feature:12165-12977:1:exon

WP_082785439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12165-12977:1:exon

CMV25_RS10990
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS10990
old locus tag: CMV25_10990
so part of: sequence
location: 12977..13192
location: region:12977-13192:1
so has part: feature:12977-13192:1:exon
subclass of: SO_0000010

47269153
type: Gene
SIO_000068: ncbigene

position:13192:1
position: 13192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12977-13192:1:exon

CMV25_RS10990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS10990
old locus tag: CMV25_10990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011669097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2933 domain-containing protein
translation: MIQFITSIAPYAFILVCPLMMLFMMKGMHGKHSEHSYNHEANELPQSEIEQLKSQNEKMSRELEDLKKHIK
SIO_010081: CMV25_RS10990
subclass of: SO_0000673
so part of: CMV25_RS10990
location: 12977..13192
location: region:12977-13192:1
so has part: feature:12977-13192:1:exon

WP_061775281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12977-13192:1:exon

CMV25_RS11000
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11000
old locus tag: CMV25_11000
so part of: sequence
location: 13502..14902
location: region:13502-14902:1
so has part: feature:13502-14902:1:exon
subclass of: SO_0000010

47269155
type: Gene
SIO_000068: ncbigene

position:13502:1
position: 13502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14902:1
position: 14902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13502-14902:1:exon

CMV25_RS11000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11000
old locus tag: CMV25_11000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011669041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MEIKKKVYLGTFVLATTILLSSCSSTNNFKDKQQVKEDPYNITLKESRTNVKINIISTTSKIADKKERHYQYTDESENNYLAGMPIILDKGKEATIKVSNKSSTTTNVHWHGLSIPNNQDGPDITLNNKGEKTFKITPKESGTFWVHSHYRPVETQVTKGMYAPIIIRTETDKKYDLDEVMMLGDIQESNEQNSMMAGMAGMNMDDMDMSGSASITDTINGKKIASNLKIEGGQIGKLRFINASANNFKTIKFPFKVRVIAKDGYNLEQAYETQNFNIAPGQRLDVEVVLMGKESKTYTIKDGNAKVKLIYKGNDKSKAISPFIPLKADNLEKYVSDKAPDISMKLTEEMEMNGSEMKMREMINGEVFPNTETFNVKVGQVYKVQFENADKMAGMSHPMHIHGAHFQIISKNGHPTNDTTWYDTYPMDQGIKTDIAIKFDEPGVWMVHCHILNHEDNGMMTSFTAK
SIO_010081: CMV25_RS11000
subclass of: SO_0000673
so part of: CMV25_RS11000
location: 13502..14902
location: region:13502-14902:1
so has part: feature:13502-14902:1:exon

WP_096040561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13502-14902:1:exon

CMV25_RS11435
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11435
so part of: sequence
location: 15030..15167
location: region:15030-15167:1
so has part: feature:15030-15167:1:exon
subclass of: SO_0000010

47269239
type: Gene
SIO_000068: ncbigene

position:15030:1
position: 15030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15167:1
position: 15167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15030-15167:1:exon

CMV25_RS11435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKHQNYSLEVKIEVARLKNEGLPTKEIIQKLIIKNTSQIRIWTL
SIO_010081: CMV25_RS11435
subclass of: SO_0000673
so part of: CMV25_RS11435
location: 15030..15167
location: region:15030-15167:1
so has part: feature:15030-15167:1:exon

WP_156470234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15030-15167:1:exon

CMV25_RS11005
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11005
old locus tag: CMV25_11005
pseudo: true
so part of: sequence
location: 15364..>16223
location: region:15364-16223:1
so has part: feature:15364-16223:1:exon
subclass of: SO_0000010

47269156
type: Gene
SIO_000068: ncbigene

position:15364:1
position: 15364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16223:1
position: 16223
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15364-16223:1:exon

CMV25_RS11005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11005
old locus tag: CMV25_11005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558257.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: CMV25_RS11005
subclass of: SO_0000673
so part of: CMV25_RS11005
location: 15364..>16223
location: region:15364-16223:1
so has part: feature:15364-16223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15364-16223:1:exon

CMV25_RS11010
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11010
old locus tag: CMV25_11010
so part of: sequence
location: complement(16292..18397)
location: region:16292-18397:-1
so has part: feature:16292-18397:-1:exon
subclass of: SO_0000010

47269157
type: Gene
SIO_000068: ncbigene

position:16292:-1
position: 16292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18397:-1
position: 18397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16292-18397:-1:exon

CMV25_RS11010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11010
old locus tag: CMV25_11010
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010905590.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MSNKTHSSNHDEMMSEHHHNHEIMDMEHENHEVHNMHNMDNMHNMDNMHDMDNMDMMNHGGHMMHMGDMSKKLKVAIILMIPLLLISPIAGFTILKFSGSEILQLILGTIIFFYSGTPFFSGAKGELKSRKPAMMMLITMGITVAYAYSVYATIMSLNGHMGMNFWFELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKSGKDVELSELKVGDLLLVKENEKIPADGLILSEALVDESMITGESRAVNKKTNDLVYGGSLNQNQPFEMKVTTLGKDSFLNQVAELVKKAQAQKSNLENMADRVAGYLFYAALIVGIFSLVFWTISSNFSFALLLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEKINTIKYALMDKTGTLTDGKFIVRNVIDFTDETDILQIMAALEGSSTHPIAQSIVSAAKPLENLKVEAVENIPGVGIKGQVNQNFYQIVNYKYLRENQLSYDEQKIAQYLDLGLTISFLINEQQDVLGFIALGDSPKSDAKAFINGLLAQGITPVMLTGDNKETAQKIASALNIPEFRAELKPEDKAEIVKEYQKKAGVLFIGDGVNDSPALATATIGFAIGAGTSVAISTADVVLVNSNPSDVLDMINISKRMLRKMKQNLWFGAGYNIIAIPVAAGILYPFTGIYIDPLIAAVLMSISTVIVSINAMGLRYDKK
SIO_010081: CMV25_RS11010
subclass of: SO_0000673
so part of: CMV25_RS11010
location: complement(16292..18397)
location: region:16292-18397:-1
so has part: feature:16292-18397:-1:exon

WP_096040562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16292-18397:-1:exon

CMV25_RS11015
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11015
old locus tag: CMV25_11015
pseudo: true
so part of: sequence
location: 18579..>18782
location: region:18579-18782:1
so has part: feature:18579-18782:1:exon
subclass of: SO_0000010

47269158
type: Gene
SIO_000068: ncbigene

position:18579:1
position: 18579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18782:1
position: 18782
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18579-18782:1:exon

CMV25_RS11015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11015
old locus tag: CMV25_11015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477736.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: CMV25_RS11015
subclass of: SO_0000673
so part of: CMV25_RS11015
location: 18579..>18782
location: region:18579-18782:1
so has part: feature:18579-18782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18579-18782:1:exon

CMV25_RS11020
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11020
old locus tag: CMV25_11020
so part of: sequence
location: complement(18798..19058)
location: region:18798-19058:-1
so has part: feature:18798-19058:-1:exon
subclass of: SO_0000010

47269159
type: Gene
SIO_000068: ncbigene

position:18798:-1
position: 18798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19058:-1
position: 19058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18798-19058:-1:exon

CMV25_RS11020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11020
old locus tag: CMV25_11020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003590746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANKFEQFSSTNNEYEQENTFPNTVKENVKEETNIDMNWEKKIKTSFSIKKSNLEKLDSLVKQTNARSRSSILDKIIEDTYELFDK
SIO_010081: CMV25_RS11020
subclass of: SO_0000673
so part of: CMV25_RS11020
location: complement(18798..19058)
location: region:18798-19058:-1
so has part: feature:18798-19058:-1:exon

WP_096040563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18798-19058:-1:exon

CMV25_RS11025
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11025
old locus tag: CMV25_11025
so part of: sequence
location: complement(19072..19872)
location: region:19072-19872:-1
so has part: feature:19072-19872:-1:exon
subclass of: SO_0000010

47269160
type: Gene
SIO_000068: ncbigene

position:19072:-1
position: 19072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19872:-1
position: 19872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19072-19872:-1:exon

CMV25_RS11025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11025
old locus tag: CMV25_11025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009490494.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MEVISFMAIKGGVGKTTMAFQLAKFLQDRKKKVLLIDMDGQKSLTGTFESENVSFKNSLSISDILSNPSITEEETAINDFISFIPSVSNLDNLTDLLSIKPNKELLLFMWFSRNIDRLEKSYEYVIIDLPPAWNLLTKNGVAVSDKIISPLDPSRFGYESHIKVLQSIGTLKKEVVDPVSGKSYITATVNFLGNRVKHNTKTSKEFLSALKGINNVIGIIPEKELINASMLEKLGIEEYLRKEEKLKEQEKFLILINDIFSNILEA
SIO_010081: CMV25_RS11025
subclass of: SO_0000673
so part of: CMV25_RS11025
location: complement(19072..19872)
location: region:19072-19872:-1
so has part: feature:19072-19872:-1:exon

WP_096040564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19072-19872:-1:exon

CMV25_RS11030
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11030
old locus tag: CMV25_11030
so part of: sequence
location: complement(20243..21574)
location: region:20243-21574:-1
so has part: feature:20243-21574:-1:exon
subclass of: SO_0000010

47269161
type: Gene
SIO_000068: ncbigene

position:20243:-1
position: 20243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21574:-1
position: 21574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20243-21574:-1:exon

CMV25_RS11030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11030
old locus tag: CMV25_11030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003139719.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MSIITKGNENKKVVDPLNEIKRRKIVEHNDLITSIAKMDKVPLKIFELAVSYINTDNPPKDHIIYLSKKELFKFFDVSDNDKHSRFKKAVDKMQEQSFFRIREKQERGFEYENIVPIPYVKWADYHDEVIIEFNKRIMPYLINLKQNFTQYALSDIMNLNSKYSIILYKWLSMQYNQYEHYSNKGGRRTEQLEGYCNPEIKVSELRTMTDTINDYKRFQSLEQRILKEPLNEINHHTHFDVTYDKIKKGRSIDSILFHISKKAQPQELNGEYKEREQDPAYLQGKKNREEQTALLSAKAMQNPYTMELLEFEILEMRNLADISLMARLQEVVYPIYSEIEGQAGINRVREHFETIKNHRQDYSKPNIAQYLLVSARNFLASGDVIKKEKGKTKYLRTEGKVEVVNGNKIPDHRYKSAYVNETTPEEQRELEIIKKELSDSMKK
SIO_010081: CMV25_RS11030
subclass of: SO_0000673
so part of: CMV25_RS11030
location: complement(20243..21574)
location: region:20243-21574:-1
so has part: feature:20243-21574:-1:exon

WP_096040565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20243-21574:-1:exon

CMV25_RS11035
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11035
old locus tag: CMV25_11035
pseudo: true
so part of: sequence
location: 21965..23416
location: region:21965-23416:1
so has part: feature:21965-23416:1:exon
subclass of: SO_0000010

47269162
type: Gene
SIO_000068: ncbigene

position:21965:1
position: 21965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23416:1
position: 23416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21965-23416:1:exon

CMV25_RS11035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11035
old locus tag: CMV25_11035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003139721.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Y-family DNA polymerase
SIO_010081: CMV25_RS11035
subclass of: SO_0000673
so part of: CMV25_RS11035
location: 21965..23416
location: region:21965-23416:1
so has part: feature:21965-23416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21965-23416:1:exon

CMV25_RS11530
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11530
so part of: sequence
location: 23413..23583
location: region:23413-23583:1
so has part: feature:23413-23583:1:exon
subclass of: SO_0000010

47269258
type: Gene
SIO_000068: ncbigene

position:23413:1
position: 23413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23583:1
position: 23583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23413-23583:1:exon

CMV25_RS11530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRVDRSYSPYKEIREYQDRAMMKWQGFYLSEHTTAMKDDKAPKKYFAIKVIGYLI
SIO_010081: CMV25_RS11530
subclass of: SO_0000673
so part of: CMV25_RS11530
location: 23413..23583
location: region:23413-23583:1
so has part: feature:23413-23583:1:exon

WP_167372355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23413-23583:1:exon

CMV25_RS11040
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: mobC
locus tag: CMV25_RS11040
old locus tag: CMV25_11040
so part of: sequence
location: 24609..24956
location: region:24609-24956:1
so has part: feature:24609-24956:1:exon
subclass of: SO_0000010

47269163
type: Gene
SIO_000068: ncbigene

position:24609:1
position: 24609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24956:1
position: 24956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24609-24956:1:exon

CMV25_RS11040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: mobC
locus tag: CMV25_RS11040
old locus tag: CMV25_11040
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MTEVKRNRYIEKKIRLRPDENNYIKNKMDNAGRKNFNAFALEMLIQGQVNIVDFKSLSDLKIAIDRVGKNINQIAKKVNETGDVSKSDIDETKKLLKEIETVVYQSIQSEYKKYK
SIO_010081: CMV25_RS11040
subclass of: SO_0000673
so part of: CMV25_RS11040
location: 24609..24956
location: region:24609-24956:1
so has part: feature:24609-24956:1:exon

WP_096040566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24609-24956:1:exon

CMV25_RS11045
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11045
old locus tag: CMV25_11045
so part of: sequence
location: 24972..26600
location: region:24972-26600:1
so has part: feature:24972-26600:1:exon
subclass of: SO_0000010

47269164
type: Gene
SIO_000068: ncbigene

position:24972:1
position: 24972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26600:1
position: 26600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24972-26600:1:exon

CMV25_RS11045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11045
old locus tag: CMV25_11045
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MVVVVKTMQIKTPERLTRSVKYILNPKKTNVPYVETEKDFPVTFTEDKKLMQLVSGHQISNVNYADQEFFLTKIMANASNGNPDNSDMNNPNRVMAHHIVQSFAPDENLTPEEIHELGRKTVLELTGGDHEFIVATHVDQDHIHNHIIFNTTNSTTLKKFRWQKGTAKSLKYISDKHADIAGANILSNTMKNSHKKYSAYQRKNNFKIEIKERLNFLLKHSTSISDFKEKAKALNVIINDTGKNVKYRLADMEQKRNTRDDTLSKRGKYSISNIEKIVSKNISVFSQPEIKNEYEKFKVEKSDDFEMKILVEDWQVKEETKNGIYIDIDYGLLNSGAILVPSHQVNKLDDGNYNIFIKKKDFFYFTNSDDATQNKFMTGNIVAKQLSHDNQHLVLHKNQYISKLDQIIKDFEYLSLKGVSTGQQFSDLKKQFENQVHETEKELSTLDEKISRLNKIISAIDGLNSDDFEKIETSEAILSDLKIDKSTKRGDLNKTIEEVKFERQVLNERFHDIVEKYKTYQGVKENVRDRENDTIKNKEVKR
SIO_010081: CMV25_RS11045
subclass of: SO_0000673
so part of: CMV25_RS11045
location: 24972..26600
location: region:24972-26600:1
so has part: feature:24972-26600:1:exon

WP_096040567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24972-26600:1:exon

CMV25_RS11050
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11050
old locus tag: CMV25_11050
so part of: sequence
location: complement(26881..26985)
location: region:26881-26985:-1
so has part: feature:26881-26985:-1:exon
subclass of: SO_0000010

47269165
type: Gene
SIO_000068: ncbigene

position:26881:-1
position: 26881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26985:-1
position: 26985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26881-26985:-1:exon

CMV25_RS11050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11050
old locus tag: CMV25_11050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002389461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MSAYETIQVILGFGMFTIALISLVVKLLKNDKKK
SIO_010081: CMV25_RS11050
subclass of: SO_0000673
so part of: CMV25_RS11050
location: complement(26881..26985)
location: region:26881-26985:-1
so has part: feature:26881-26985:-1:exon

WP_068876876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26881-26985:-1:exon

CMV25_RS11055
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11055
old locus tag: CMV25_11055
so part of: sequence
location: complement(27256..28260)
location: region:27256-28260:-1
so has part: feature:27256-28260:-1:exon
subclass of: SO_0000010

47269166
type: Gene
SIO_000068: ncbigene

position:27256:-1
position: 27256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28260:-1
position: 28260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27256-28260:-1:exon

CMV25_RS11055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11055
old locus tag: CMV25_11055
EC number: 5.1.3.-
inference: COORDINATES: protein motif:HMM:NF013431.2
GO function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldose epimerase family protein
translation: MSVRVEKVSMGEGKTTQLVRLENASLTVELVAYGAHLYRVLAKDRQGIAENVVLNVTPISALATDLQYFGATVGPVAGRIKQAQIGDLSLEVNDNTNSLHSGSQGWSFQEWDLDWQESDDEITVTFSYIDHKSGFPGPIAAQVIYHLIDNQLSITFTGESPVATFFNPTNHGYFNLSGELKTDIRQQILEISADHILDTDAELIPTGLFLPVAETPYDFTTAKPVENALNALPSGLDTAFVFDDHAGDHHVTLYDKASGRRLDVTSEARSVIIYSVSAWDRDTQVNDHPMAKELGLAIEFQELPDLPHHPEWGSIALLPDEKVSKTIHYRFGVS
SIO_010081: CMV25_RS11055
subclass of: SO_0000673
so part of: CMV25_RS11055
location: complement(27256..28260)
location: region:27256-28260:-1
so has part: feature:27256-28260:-1:exon

WP_081144397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27256-28260:-1:exon

CMV25_RS11060
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11060
old locus tag: CMV25_11060
so part of: sequence
location: 28323..28790
location: region:28323-28790:1
so has part: feature:28323-28790:1:exon
subclass of: SO_0000010

47269167
type: Gene
SIO_000068: ncbigene

position:28323:1
position: 28323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28790:1
position: 28790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28323-28790:1:exon

CMV25_RS11060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11060
old locus tag: CMV25_11060
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTDVSYVYHKQGRLYLIIIKDLYDNSILAYNLSKFNDNQLVFENLDLVFRKDWDKSKSFLLHSDQGFQYTNKQYHKKLETFNVTVSHSCKGNCYDNACCENFFSHLKSESLELFVPENETELMQQIDDFITWYNFDRPQLKLKGMTPIEYRQTYL
SIO_010081: CMV25_RS11060
subclass of: SO_0000673
so part of: CMV25_RS11060
location: 28323..28790
location: region:28323-28790:1
so has part: feature:28323-28790:1:exon

WP_096040568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28323-28790:1:exon

CMV25_RS11065
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11065
old locus tag: CMV25_11065
pseudo: true
so part of: sequence
location: complement(<28913..29508)
location: region:28913-29508:-1
so has part: feature:28913-29508:-1:exon
subclass of: SO_0000010

47269168
type: Gene
SIO_000068: ncbigene

position:28913:-1
position: 28913
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29508:-1
position: 29508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28913-29508:-1:exon

CMV25_RS11065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11065
old locus tag: CMV25_11065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558257.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: CMV25_RS11065
subclass of: SO_0000673
so part of: CMV25_RS11065
location: complement(<28913..29508)
location: region:28913-29508:-1
so has part: feature:28913-29508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28913-29508:-1:exon

CMV25_RS11070
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11070
old locus tag: CMV25_11070
pseudo: true
so part of: sequence
location: 29769..>29948
location: region:29769-29948:1
so has part: feature:29769-29948:1:exon
subclass of: SO_0000010

47269169
type: Gene
SIO_000068: ncbigene

position:29769:1
position: 29769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29948:1
position: 29948
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29769-29948:1:exon

CMV25_RS11070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11070
old locus tag: CMV25_11070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004903833.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: CMV25_RS11070
subclass of: SO_0000673
so part of: CMV25_RS11070
location: 29769..>29948
location: region:29769-29948:1
so has part: feature:29769-29948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29769-29948:1:exon

CMV25_RS11075
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11075
old locus tag: CMV25_11075
so part of: sequence
location: 30127..32385
location: region:30127-32385:1
so has part: feature:30127-32385:1:exon
subclass of: SO_0000010

47269170
type: Gene
SIO_000068: ncbigene

position:30127:1
position: 30127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32385:1
position: 32385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30127-32385:1:exon

CMV25_RS11075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11075
old locus tag: CMV25_11075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003137758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 65 protein
translation: MKQIKRIMGIDPWKITSNQIEKEDRRLQESLTSIGNGYMGMRGNFSETYSGDSHQGTYIAGVWFPDKTRVGWWKNGYPEYFGKAINALNFASVRVFIDNKEVDLAASHVTDFNLSLDMEKGILTYTYVAYGVRVTAERFFSIAQQELAVFAFMFESLDGEIHQIRTASIIDANVRNEDSNYDEKFWTVKNLDNTATGSFIVTETIPNPFGVEQFTVAAKQSFAGDFTRVKQETRESSVLDVYEAKLVENAPLTFIKNVLVVTSRDIEPSNLTKVLSNLTLEISKKTYHEFYKEQEIAWKKRWEIADVQIDGSAEAQQGIRFNLFQLFSTYYGEDERLNIGPKGFTGEKYGGATYWDTEAYAVPLYLALSDEKVAKNLLKYRHNQLPQAQHNARQQGLKGALYPMVTFTGVECHNEWEITFEEIHRNGAMAYAIYNYSNYTGDETYLAHEGLEILIEIARFWADRVHYSKRNDKYMIHGVTGPNEYENNINNNWYTNKLAAWVLTYTAESLAKYPRPDLIEGAETAHWSEIVDKMYYPEDEELGIFVQHDGYLDKDLTPVAQLDPKNLPLNQNWSWDRVLRSPYIKQADVLQGIYFFGNQFSLAEKQRNFDFYEPLTVHESSLSPSIHAILAAELGMEDKAVEMYERTARLDLDNYNNDTEDGLHITSMTGSWLAIVHGFAQMKTWDGKLSFAPFLPSDWTGYTFHINYRGRLLKIEVTENVTVSLLSGEALNLEVYGQSVELTSSYTVKVGG
SIO_010081: CMV25_RS11075
subclass of: SO_0000673
so part of: CMV25_RS11075
location: 30127..32385
location: region:30127-32385:1
so has part: feature:30127-32385:1:exon

WP_096040569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30127-32385:1:exon

CMV25_RS11080
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: pgmB
locus tag: CMV25_RS11080
old locus tag: CMV25_11080
so part of: sequence
location: 32387..33052
location: region:32387-33052:1
so has part: feature:32387-33052:1:exon
subclass of: SO_0000010

47269171
type: Gene
SIO_000068: ncbigene

position:32387:1
position: 32387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33052:1
position: 33052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32387-33052:1:exon

CMV25_RS11080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: pgmB
locus tag: CMV25_RS11080
old locus tag: CMV25_11080
EC number: 5.4.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019292892.1
GO function: GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO process: GO:0046352 - disaccharide catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-phosphoglucomutase
translation: MFQAVLFDLDGVITDTAEYHFLAWEKLAQEIGIKIDREFNENLKGVSREESLRRILEHGGKENDYTAEEFAAMAKLKNDNYVEMIQAVSPKDIYPGILQLLQDLRGQGIKIALASASKNGPFLLDQMQLTDYFDAIADPAKVAASKPAPDIFIAAAEGVGVDVSQAIGIEDAYSGIAAIKAAKVLPIGVGKAEVLGTDIALVESTEMLTFEYLKKIWEINH
SIO_010081: CMV25_RS11080
subclass of: SO_0000673
so part of: CMV25_RS11080
location: 32387..33052
location: region:32387-33052:1
so has part: feature:32387-33052:1:exon

WP_031367146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32387-33052:1:exon

CMV25_RS11085
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11085
old locus tag: CMV25_11085
so part of: sequence
location: 33124..35286
location: region:33124-35286:1
so has part: feature:33124-35286:1:exon
subclass of: SO_0000010

47269172
type: Gene
SIO_000068: ncbigene

position:33124:1
position: 33124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35286:1
position: 35286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33124-35286:1:exon

CMV25_RS11085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11085
old locus tag: CMV25_11085
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002363316.1
GO function: GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS transporter subunit IIBC
translation: MKKIFSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLINPDLAPLVTTGGVIENIGWAIIGNLHLLFALAIGGSWAKERAGGAFAAGISFILINRITGAIFGVTNEMLANEDAFTHTLFGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGAMAYNKYYNYRKLPDALSFFNGKRFVPFVVILWSTIVALILAIVWPNVQAGINNFGLWIAESKESAPVLAPFLYGTLERLLLPFGLHHMLTIPINYTQLGGTYEILSGAQAGTKVFGQDPLWLAWATDLVNLKGAGDMSQYEFVLKNWTPARFKVGQMIGSSGILMGLALAMYRNVDPDKKSKYISMYFSAALAVFLTGVTEPLEFMFMFAAVPLYIVYSVIQGAAFAMADIIHLRVHSFGNIELLTRTPLAIKAGLGIDLLNFVICVILFGVLTYFVANFLIKKFNYATPGRNGNYNNDSEETPSGSATNADQQIIKIIHLLGGKENIKDVDACMTRLRVSVEDPGKVGSEEEWKRAGAMGLIVKDKGVQAVYGPKADVLKSDIEDLLQSGADIPEPTVEATNKNEKNEEKHVLGIEKELFTVATGEVIALTDVNDPVFSQKMMGDGFAVIPATGEVTAPLSGKIVSVFPTKHAIGMQTAEGAEVLIHMGLDTVQMSQPAFEILVSEGQEVVAGTTIAQMNLDAIKNEGKETTIIVVFTDDKVNGLTINKLGDTERGTVIGKINL
SIO_010081: CMV25_RS11085
subclass of: SO_0000673
so part of: CMV25_RS11085
location: 33124..35286
location: region:33124-35286:1
so has part: feature:33124-35286:1:exon

WP_096040570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33124-35286:1:exon

CMV25_RS11090
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11090
old locus tag: CMV25_11090
so part of: sequence
location: 35499..36323
location: region:35499-36323:1
so has part: feature:35499-36323:1:exon
subclass of: SO_0000010

47269173
type: Gene
SIO_000068: ncbigene

position:35499:1
position: 35499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36323:1
position: 36323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35499-36323:1:exon

CMV25_RS11090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11090
old locus tag: CMV25_11090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002342391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease/exonuclease/phosphatase family protein
translation: MKIMTLNTHSWLEEEPQEKLKQIAQKICHEQYDVIALQEVNQTMDAKRLTSGQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLTSQTHLVSETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWADEKSGFAFEWKELEASLAPLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPTAQKKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCFVTSYQRIFDGENGPIVSDHYGVAVTLE
SIO_010081: CMV25_RS11090
subclass of: SO_0000673
so part of: CMV25_RS11090
location: 35499..36323
location: region:35499-36323:1
so has part: feature:35499-36323:1:exon

WP_096040571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35499-36323:1:exon

CMV25_RS11095
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: pepG1
locus tag: CMV25_RS11095
old locus tag: CMV25_11095
pseudo: true
so part of: sequence
location: complement(36720..36864)
location: region:36720-36864:-1
so has part: feature:36720-36864:-1:exon
subclass of: SO_0000010

47269174
type: Gene
SIO_000068: ncbigene

position:36720:-1
position: 36720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36864:-1
position: 36864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36720-36864:-1:exon

CMV25_RS11095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: pepG1
locus tag: CMV25_RS11095
old locus tag: CMV25_11095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002389461.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type I toxin-antitoxin system toxin PepG1
SIO_010081: CMV25_RS11095
subclass of: SO_0000673
so part of: CMV25_RS11095
location: complement(36720..36864)
location: region:36720-36864:-1
so has part: feature:36720-36864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36720-36864:-1:exon

CMV25_RS11100
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11100
old locus tag: CMV25_11100
so part of: sequence
location: complement(37155..37835)
location: region:37155-37835:-1
so has part: feature:37155-37835:-1:exon
subclass of: SO_0000010

47269175
type: Gene
SIO_000068: ncbigene

position:37155:-1
position: 37155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37835:-1
position: 37835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37155-37835:-1:exon

CMV25_RS11100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11100
old locus tag: CMV25_11100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS1216 family transposase
translation: MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADSLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHHPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFWFSVCTEIKVLLGIPA
SIO_010081: CMV25_RS11100
subclass of: SO_0000673
so part of: CMV25_RS11100
location: complement(37155..37835)
location: region:37155-37835:-1
so has part: feature:37155-37835:-1:exon

WP_167372356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37155-37835:-1:exon

CMV25_RS11105
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11105
old locus tag: CMV25_11105
so part of: sequence
location: complement(37919..38296)
location: region:37919-38296:-1
so has part: feature:37919-38296:-1:exon
subclass of: SO_0000010

47269176
type: Gene
SIO_000068: ncbigene

position:37919:-1
position: 37919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38296:-1
position: 38296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37919-38296:-1:exon

CMV25_RS11105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11105
old locus tag: CMV25_11105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000931877.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase family protein
translation: MLTKKFKETLKYEGSVSLTSWGAEKSPHVTGTWISYLQLTSDERILAPAAGMHYLEEDIKVNDTIYLMLGVREVDGKNGYQGIGFRVSAKAKLISNGPEFEMMKEKYPFLRAVLELTPVEVEQLL
SIO_010081: CMV25_RS11105
subclass of: SO_0000673
so part of: CMV25_RS11105
location: complement(37919..38296)
location: region:37919-38296:-1
so has part: feature:37919-38296:-1:exon

WP_096040573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37919-38296:-1:exon

CMV25_RS11110
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: nrdF
locus tag: CMV25_RS11110
old locus tag: CMV25_11110
so part of: sequence
location: complement(38569..39519)
location: region:38569-39519:-1
so has part: feature:38569-39519:-1:exon
subclass of: SO_0000010

47269177
type: Gene
SIO_000068: ncbigene

position:38569:-1
position: 38569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39519:-1
position: 39519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38569-39519:-1:exon

CMV25_RS11110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: nrdF
locus tag: CMV25_RS11110
old locus tag: CMV25_11110
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014294099.1
GO component: GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1b ribonucleoside-diphosphate reductase subunit beta
translation: MLNKTMNWQLIEDELDEYVWDKATAQFWLDTRVPVSNDLLDWRKLSDMEKEVVKKAVGGLALLDTLQSEEGLYALKKNARTLKERAVLSNFTFMESIHAKTYGTILISLNTFKDIEEIYTWMNNDRRMQFKAKKINEFYQNGTPMQVKVASVFLEGILYYSNFFIPLWYRGQNKLANLAELIKLVIRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEEVYSEIGLVEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPIVMNGISIETANHDFFSQVGAGYLMGEAEEMLNDDYIF
SIO_010081: CMV25_RS11110
subclass of: SO_0000673
so part of: CMV25_RS11110
location: complement(38569..39519)
location: region:38569-39519:-1
so has part: feature:38569-39519:-1:exon

WP_096040574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38569-39519:-1:exon

CMV25_RS11115
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: tpx
locus tag: CMV25_RS11115
old locus tag: CMV25_11115
pseudo: true
so part of: sequence
location: complement(39603..40094)
location: region:39603-40094:-1
so has part: feature:39603-40094:-1:exon
subclass of: SO_0000010

47269178
type: Gene
SIO_000068: ncbigene

position:39603:-1
position: 39603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40094:-1
position: 40094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39603-40094:-1:exon

CMV25_RS11115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: tpx
locus tag: CMV25_RS11115
old locus tag: CMV25_11115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004182514.1
GO function: GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thiol peroxidase
SIO_010081: CMV25_RS11115
subclass of: SO_0000673
so part of: CMV25_RS11115
location: complement(39603..40094)
location: region:39603-40094:-1
so has part: feature:39603-40094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39603-40094:-1:exon

CMV25_RS11120
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11120
old locus tag: CMV25_11120
so part of: sequence
location: complement(40455..41408)
location: region:40455-41408:-1
so has part: feature:40455-41408:-1:exon
subclass of: SO_0000010

47269179
type: Gene
SIO_000068: ncbigene

position:40455:-1
position: 40455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41408:-1
position: 41408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40455-41408:-1:exon

CMV25_RS11120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11120
old locus tag: CMV25_11120
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011915235.1
GO component: GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MSKNYLYYRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQRQLKCLLILLTNLSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVDNDSRVLEYLNDINTVYRESSLIKKRFIALCVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKIKLLLKESDPKEVERFKAWSYETVNHFVKLGLNIIGDFYYLKESKKIAKNLILQEANNILMGIGLKEQFSFNDEVLKGINYRLNNLRRHYLSISSNKSTSTNEEIMEESDYEF
SIO_010081: CMV25_RS11120
subclass of: SO_0000673
so part of: CMV25_RS11120
location: complement(40455..41408)
location: region:40455-41408:-1
so has part: feature:40455-41408:-1:exon

WP_096040575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40455-41408:-1:exon

CMV25_RS11125
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: nrdE
locus tag: CMV25_RS11125
old locus tag: CMV25_11125
so part of: sequence
location: complement(41418..43574)
location: region:41418-43574:-1
so has part: feature:41418-43574:-1:exon
subclass of: SO_0000010

47269180
type: Gene
SIO_000068: ncbigene

position:41418:-1
position: 41418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43574:-1
position: 43574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41418-43574:-1:exon

CMV25_RS11125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: nrdE
locus tag: CMV25_RS11125
old locus tag: CMV25_11125
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017865351.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1b ribonucleoside-diphosphate reductase subunit alpha
translation: MTKDYFILNNMLNVLVEGQIPLHYDREALEEYLNTEIRDNLKTFDSIDEKLDYLISHDYIDESVLSIYGENNREFVKKLFIFAYNYGFKFKSFMAAYKFYNQYAMKTNDLNYYLENFEDRVVFNALYLANGDRNLAHKILEELISQRYQPATPTFLNAGKKRRGEMVSCFLIDINDSMLSIGRNINSALQLSRIGGGVGVNLSNLRATGSPIKEIENASSGVLPVMKLLEDSFSYSNQLGQRNGAGVVYLNVFHQDILEFLSTKKENADEKIRVKTLSLGLVVPDKYYELLKTNEPMCLFNPYHVERVYGIPFSYVDLTKEYDTMVANGEIEKTVINARELEQEISRLQQESGYPYILNIDTANRTNPVKGKIIMSNLCSEILQPQEPSILNPDLSYKKVGTDISCNLGSMNMVNLMEAKDFGKSIEYAIRALTTVTDQGAISEVPTVANGNSLYHTIGLGAMGLHTVLALNGIDYESDEALEFVDAFFLAMNYYSLKASHQIAIEKNETFHNFEYSRYADGSYFDYYLAKEFHFTSEKVAKISENILLPTIEDWQLLKENVMKDGLYHRNRLAIAPNGSISYINETSASLHPITQLIENRQEKKVGSIFYPAPYLSNKTLRYYKTAYNMDQRKIIDIYAKAQQHIDQGMSLTLFMRSVLPEGIYEWKKQGSLKLTTRDLNRLRNYAWTKGIKSLYYVRTYTEDDEFNSVNNCESCMI
SIO_010081: CMV25_RS11125
subclass of: SO_0000673
so part of: CMV25_RS11125
location: complement(41418..43574)
location: region:41418-43574:-1
so has part: feature:41418-43574:-1:exon

WP_096040576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41418-43574:-1:exon

CMV25_RS11130
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
gene: nrdI
locus tag: CMV25_RS11130
old locus tag: CMV25_11130
so part of: sequence
location: complement(43609..44376)
location: region:43609-44376:-1
so has part: feature:43609-44376:-1:exon
subclass of: SO_0000010

47269181
type: Gene
SIO_000068: ncbigene

position:43609:-1
position: 43609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44376:-1
position: 44376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43609-44376:-1:exon

CMV25_RS11130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
gene: nrdI
locus tag: CMV25_RS11130
old locus tag: CMV25_11130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014294095.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
translation: MQVIRIYYISLSGNTTNFLERLDHYLQKELQEKLDYVNVKNLEKNNESLGFEIKEPYFAFLPSYLEGGNGVTTGNTEILTTPLRRLIAYKKNSKYCMGIIGSGNRNFNKQFCLTAHQYSEEFGFPVLDEFELRGTEEDVIRISNRLNTRLIEWRYSSELVPYRHLPNMTPHHMPHTLRHSHHIKDGTWQKMTIWSGKIKIFELRENGDVLRECTYDTSNQPPFIEPQTWYKLSPLTEDLVFSIDLFCKKSDFLHQ
SIO_010081: CMV25_RS11130
subclass of: SO_0000673
so part of: CMV25_RS11130
location: complement(43609..44376)
location: region:43609-44376:-1
so has part: feature:43609-44376:-1:exon

WP_096040577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43609-44376:-1:exon

CMV25_RS11135
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11135
old locus tag: CMV25_11135
so part of: sequence
location: 44534..45205
location: region:44534-45205:1
so has part: feature:44534-45205:1:exon
subclass of: SO_0000010

47269182
type: Gene
SIO_000068: ncbigene

position:44534:1
position: 44534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45205:1
position: 45205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44534-45205:1:exon

CMV25_RS11135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11135
old locus tag: CMV25_11135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004234906.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MTKIGCVHRVPLFNNLACDERSEVQELLYHKTFQKGEIIFSPDDPKRLSIVSAGAMKIYKLSKTGKEQLIRIVNEGEYDGENYLFGLSNDSLYGEAIKETKVCILYKSDFNKLINLYPQLSCKLLQLNAYKSLEVEKQLQLLAIDSIEDRLATYFSQLSLLSEVMTEETITIPVSLKELASYLATSPETISRKLRAFQEGGLINRKGKKIILFRSFWNKFDFL
SIO_010081: CMV25_RS11135
subclass of: SO_0000673
so part of: CMV25_RS11135
location: 44534..45205
location: region:44534-45205:1
so has part: feature:44534-45205:1:exon

WP_096040578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44534-45205:1:exon

CMV25_RS11140
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11140
old locus tag: CMV25_11140
so part of: sequence
location: complement(45276..45954)
location: region:45276-45954:-1
so has part: feature:45276-45954:-1:exon
subclass of: SO_0000010

47269183
type: Gene
SIO_000068: ncbigene

position:45276:-1
position: 45276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45954:-1
position: 45954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45276-45954:-1:exon

CMV25_RS11140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11140
old locus tag: CMV25_11140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS1216 family transposase
translation: MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTTSTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
SIO_010081: CMV25_RS11140
subclass of: SO_0000673
so part of: CMV25_RS11140
location: complement(join(45276..45627,45626..45954))
location: region:45276-45954:-1
so has part: feature:45626-45954:-1:exon
so has part: feature:45276-45627:-1:exon

WP_167372357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45626-45954:-1:exon

position:45626:-1
position: 45626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45276-45627:-1:exon

position:45627:-1
position: 45627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMV25_RS11145
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11145
old locus tag: CMV25_11145
so part of: sequence
location: 46666..46998
location: region:46666-46998:1
so has part: feature:46666-46998:1:exon
subclass of: SO_0000010

47269184
type: Gene
SIO_000068: ncbigene

position:46666:1
position: 46666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46998:1
position: 46998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46666-46998:1:exon

CMV25_RS11145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11145
old locus tag: CMV25_11145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCKEAAFEILVHNHEQELRFHKLWDEDAQPYYFESQPQLTIPKSIKESSWMKHLLSCDLSQFEFERFDEFLNKDDEQFLKWVNTGKNENILYIYLAGKTIGVDLVKVVEG
SIO_010081: CMV25_RS11145
subclass of: SO_0000673
so part of: CMV25_RS11145
location: 46666..46998
location: region:46666-46998:1
so has part: feature:46666-46998:1:exon

WP_072353701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46666-46998:1:exon

CMV25_RS11150
type: Gene
subclass of: SO_0000704
RO_0002162: 1366
locus tag: CMV25_RS11150
old locus tag: CMV25_11150
so part of: sequence
location: complement(47038..47706)
location: region:47038-47706:-1
so has part: feature:47038-47706:-1:exon
subclass of: SO_0000010

47269185
type: Gene
SIO_000068: ncbigene

position:47038:-1
position: 47038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47706:-1
position: 47706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47038-47706:-1:exon

CMV25_RS11150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1366
locus tag: CMV25_RS11150
old locus tag: CMV25_11150
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007123752.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase
translation: MRINILQHSPNEGPGFIKDWALERGHDIYVYHPYYFDGILPNEKDTDMLIILGGPMSPNDDLPWIKDERKLIQELIDRSIPIFGACYGAQQISKTLGYDVSKAPYKEVGWAPVYLKSNSIQNIPPKLSALHWHEEMFEIPKEAELLFSSDLLENQGFLLKNIIGLQFHFEPTKTDIHEIVVNDASYALNNNALNQSPKDILTNDFPSENKETMFKLLDYISQ
SIO_010081: CMV25_RS11150
subclass of: SO_0000673
so part of: CMV25_RS11150
location: complement(47038..47706)
location: region:47038-47706:-1
so has part: feature:47038-47706:-1:exon

WP_021464853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47038-47706:-1:exon