Borrelia anserina Es isolate UTHSCSA plasmid cp5, complete sequence.
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
Genome of the avian spirochetosis agent Borrelia anserina Es
Submitted (22-FEB-2016) Microbiology and Molecular Genetics, University of California Irvine, 3012 Hewitt, Irvine, CA 92697-4028, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP014521.1.\nA small, probable circular plasmid that has sequence similarities\nto the lp17 group of linear plasmids of B. burgdorferi and other\nLyme disease group species.\nSequence similar to B. anserina BA2 plasmid Contig0012 (CP005840).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly\n Cell v. 8.5\nGenome Coverage :: 1000X\nSequencing Technology :: Illumina; IonTorrent; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 03:03:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 984\nCDSs (total) :: 946\nGenes (coding) :: 937\nCDSs (with protein) :: 937\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 9\nCDSs (without protein) :: 9\nPseudo Genes (ambiguous residues) :: 0 of 9\nPseudo Genes (frameshifted) :: 5 of 9\nPseudo Genes (incomplete) :: 3 of 9\nPseudo Genes (internal stop) :: 1 of 9\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014683069.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012539781.1
COORDINATES: similar to AA sequence:RefSeq:WP_014683070.1
COORDINATES: similar to AA sequence:RefSeq:WP_014683071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539780.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539779.1
chromosome replication/partitioning protein