Monodelphis domestica isolate mMonDom1 chromosome Y, mMonDom1.pri, whole genome shotgun sequence.
Monodelphis domestica (gray short-tailed opossum)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis.
REFSEQ INFORMATION: The reference sequence is identical to\nCM051232.1.\nAssembly name: mMonDom1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/01/18. The original whole-genome shotgun project has the\naccession JAQIHD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 05-MAY-2022\nAssembly Method :: HiFiasm v. 0.15.4 + galaxy; purge_dups v.\n 1.2.5 + galaxy3; Bionano Solve v. 3.6.1.\n + galaxy2; salsa v. 2.3 + galaxy0\nAssembly Name :: mMonDom1.pri\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 32.9x\nSequencing Technology :: PacBio Sequel II HiFi; Bionano Genomics\n DLS; Arima Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_027887165.1-RS_2023_05\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 05/17/2023\n##Genome-Annotation-Data-END##
cAMP-regulated phosphoprotein 19-like; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
cAMP-regulated phosphoprotein 19-like, transcript variant X1
cAMP-regulated phosphoprotein 19-like, transcript variant X3
cAMP-regulated phosphoprotein 19-like, transcript variant X4
cAMP-regulated phosphoprotein 19-like, transcript variant X2
transmembrane protein 50B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
endogenous retrovirus group K member 6 Env polyprotein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
endogenous retrovirus group K member 6 Env polyprotein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
uncharacterized LOC130456225; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456225, transcript variant X1
uncharacterized LOC130456225, transcript variant X2
uncharacterized protein LOC130456225 isoform X2
uncharacterized protein LOC130456225 isoform X1
uncharacterized LOC130456230; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456230, transcript variant X1
uncharacterized LOC130456230, transcript variant X2
uncharacterized LOC130456230, transcript variant X3
uncharacterized LOC130456230, transcript variant X4
uncharacterized LOC130456227; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456227, transcript variant X2
uncharacterized LOC130456227, transcript variant X1
RNA-binding protein FUS-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456231; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456224; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456224, transcript variant X2
uncharacterized LOC130456224, transcript variant X1
uncharacterized LOC130456228; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456228, transcript variant X3
uncharacterized LOC130456228, transcript variant X2
uncharacterized LOC130456228, transcript variant X1
uncharacterized LOC130456222; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130456222, transcript variant X2
uncharacterized LOC130456222, transcript variant X1