Streptomyces niveus NCIMB 11891 plasmid pSniv3 scaffold00004, whole genome shotgun sequence.
type: Entry
definition: Streptomyces niveus NCIMB 11891 plasmid pSniv3 scaffold00004, whole genome shotgun sequence.
sequence version: NZ_CM002283.1
sequence date: 2023-05-03
sequence: sequence
division: CON
label: NZ_CM002283.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02469390
keyword: WGS
keyword: RefSeq
source: Streptomyces niveus NCIMB 11891
organism: Streptomyces niveus NCIMB 11891
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
reference: 1
references: 24407644
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002283.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.5.3\nAssembly Name :: S.niveus_v1\nGenome Coverage :: 23.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 03:39:29\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,929\nCDSs (total) :: 7,855\nGenes (coding) :: 7,535\nCDSs (with protein) :: 7,535\nGenes (RNA) :: 74\nrRNAs :: 2 (5S)\ncomplete rRNAs :: 2 (5S)\ntRNAs :: 69\nncRNAs :: 3\nPseudo Genes (total) :: 320\nCDSs (without protein) :: 320\nPseudo Genes (ambiguous residues) :: 0 of 320\nPseudo Genes (frameshifted) :: 88 of 320\nPseudo Genes (incomplete) :: 272 of 320\nPseudo Genes (internal stop) :: 11 of 320\nPseudo Genes (multiple problems) :: 46 of 320\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 19358
topology: linear
so has quality: SO_0000987
location: 1..19358
location: region:1-19358:1
RO_0002162: 1352941

NZ_CM002283
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02469390
type: BioSample
SIO_000068: biosample

1
title: Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin
author: Flinspach, K.
author: Ruckert, C.
author: Kalinowski, J.
author: Heide, L.
author: Apel, A.K.
journal: Genome Announc 2 (1), e01146-13 (2014)
pubmed: 24407644
comments: Publication Status: Online-Only

24407644
type: PubMed
SIO_000068: pubmed

2
title: Draft genome sequence of Streptomyces niveus NCIMB 11891
author: Ruckert, C.
author: Flinspach, K.
author: Szczepanowski, R.
author: Heide, L.
author: Kalinowski, J.
author: Apel, A.K.
journal: Unpublished

3
title: Direct Submission
author: Ruckert, C.
author: Flinspach, K.
author: Szczepanowski, R.
author: Heide, L.
author: Kalinowski, J.
author: Apel, A.K.
journal: Submitted (05-SEP-2013) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld, NRW 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19358:1
position: 19358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19358:1:source
so part of: sequence
organism: Streptomyces niveus NCIMB 11891
mol type: genomic DNA
strain: NCIMB 11891
culture collection: NCIMB:11891
type material: type strain of Streptomyces spheroides
plasmid: pSniv3

1352941
type: Taxonomy
SIO_000068: taxonomy

M877_RS79900
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79900
old locus tag: M877_39965
so part of: sequence
location: <1659..2004
location: region:1659-2004:1
so has part: feature:1659-2004:1:exon
subclass of: SO_0000010

position:1659:1
position: 1659
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2004:1
position: 2004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659-2004:1:exon

M877_RS79900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79900
old locus tag: M877_39965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 2
transl table: 11
product: hypothetical protein
translation: THRHLAAWRSVHQLAGCRTAARLTGGEPMTKQSFYDFEQVVPELIVRYAIGGQEREAHVLANGHTLEAHTERLESLAEPSLAGPNYVQWTLVAGGQVSIRLDAIVAIEAPERTV
SIO_010081: M877_RS79900
subclass of: SO_0000673
so part of: M877_RS79900
location: <1659..2004
location: region:1659-2004:1
so has part: feature:1659-2004:1:exon

WP_211247015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1659-2004:1:exon

M877_RS79905
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79905
old locus tag: M877_39970
so part of: sequence
location: complement(2358..2825)
location: region:2358-2825:-1
so has part: feature:2358-2825:-1:exon
subclass of: SO_0000010

position:2358:-1
position: 2358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2825:-1
position: 2825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2358-2825:-1:exon

M877_RS79905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79905
old locus tag: M877_39970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018104743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTALVAVLGTLLGSFVTGALQVRQTRVAQDGTRAEQVRRDRLQAVTDLAAVVSDHRRAMWTRESARLGAAPAERVQQLRDASHDTRAAITRPYVTLQVLIPHPDVVAAAHEAVSRAYALREAADPATLDAAREAAKEAHDAFVTASADFLAVAA
SIO_010081: M877_RS79905
subclass of: SO_0000673
so part of: M877_RS79905
location: complement(2358..2825)
location: region:2358-2825:-1
so has part: feature:2358-2825:-1:exon

WP_023544007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2358-2825:-1:exon

M877_RS79910
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79910
old locus tag: M877_39975
so part of: sequence
location: complement(2890..3201)
location: region:2890-3201:-1
so has part: feature:2890-3201:-1:exon
subclass of: SO_0000010

position:2890:-1
position: 2890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3201:-1
position: 3201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890-3201:-1:exon

M877_RS79910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79910
old locus tag: M877_39975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRPVMTCDRSGCMALYKPDTDAGADVLERAARVVGWRRLTAASHECPACIRGAGPVLELGECPACTGRTGFKADGEVCLYCGQLTPDPDTGDEWDDIPGVTD
SIO_010081: M877_RS79910
subclass of: SO_0000673
so part of: M877_RS79910
location: complement(2890..3201)
location: region:2890-3201:-1
so has part: feature:2890-3201:-1:exon

WP_023544008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2890-3201:-1:exon

M877_RS80680
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS80680
old locus tag: M877_39980
so part of: sequence
location: complement(3198..4049)
location: region:3198-4049:-1
so has part: feature:3198-4049:-1:exon
subclass of: SO_0000010

position:3198:-1
position: 3198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049:-1
position: 4049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198-4049:-1:exon

M877_RS80680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS80680
old locus tag: M877_39980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTDTGDLPQYAHHTGRITLTHADTEPEIRLGGRNAATTFWQDGTTSYLLHFRSGHVHGWTMADETDTAIQAVDSLRAGEEMSGQRLWSALRDVRRLRGRLEALEAELVLYAREKTVSGRSRMSLREIGEVTETHHTTVAERVDRMQAGAHAPFRGWLVQHTDREHLYGGTPAETPKVPSLREQIAEAPGGAFLAEAVPTDPGGYVLTVTRYTPEPEELLRLELPDWDHFRSASAGHRLIEQGFQVLPAAHYEPDRAAGWKPGADGLTYTAPVFGIRPTKAGR
SIO_010081: M877_RS80680
subclass of: SO_0000673
so part of: M877_RS80680
location: complement(3198..4049)
location: region:3198-4049:-1
so has part: feature:3198-4049:-1:exon

WP_023544009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3198-4049:-1:exon

M877_RS79920
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79920
old locus tag: M877_39990
so part of: sequence
location: 4929..5483
location: region:4929-5483:1
so has part: feature:4929-5483:1:exon
subclass of: SO_0000010

position:4929:1
position: 4929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5483:1
position: 5483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4929-5483:1:exon

M877_RS79920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79920
old locus tag: M877_39990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSSRPMLNQREAAAACGVSRTTIRRRREAGDLPNAVQDDVRGWLIPVDDLLAAGLRLHAPTAPDKTAPAGPDADVDQEHDAAELRAELERVRHEHALAVAEAEHGRQLAEAEAKHLRAELAARADHIADLQRTLKALMPSPERPILQPSVPGQAQSNDPPPVPTSPDAGAGPAAGERRRWWRRT
SIO_010081: M877_RS79920
subclass of: SO_0000673
so part of: M877_RS79920
location: 4929..5483
location: region:4929-5483:1
so has part: feature:4929-5483:1:exon

WP_158689623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4929-5483:1:exon

M877_RS85530
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS85530
old locus tag: M877_39995
so part of: sequence
location: complement(5558..7267)
location: region:5558-7267:-1
so has part: feature:5558-7267:-1:exon
subclass of: SO_0000010

position:5558:-1
position: 5558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7267:-1
position: 7267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558-7267:-1:exon

M877_RS85530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS85530
old locus tag: M877_39995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010988920.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2637 domain-containing protein
translation: MTETQMAARPEATAGAAPGTTPAAPVTRSAAPVTTDTTPPPPRKGGRPRPGSADSPVSTAPAGDGAAPADSVATPAAGSRAIGWLLIGLAGLGMPLVGVIGFAASYSTLERFAAGHGFSDVLAPWFPVGIDASIIALLAVDLVMVRKGAPWPLLRFAAHAMTLLTVLLNASDGLTKAPGESLWAGLLADPLWALSHGVMPVLFVLGVEAARRLLMHAAAIEEGTETDRIPLHRWALAPVRTGRLYRRMRLAAVRSYPAMVERERALEGYRVWLTQELKGDLSEATEIQMLPMTMAPHGYTVEEALALPAKWKAEAAERDRLKAEEARLEAERDREQKKADRIAEITDEADVQEAVFLTEARTGTAQAKAEEAKARAEHQRTAAERLSLREAEALESEEAAAARRRAAEETAEAERLELEAAEMRKEAARIAADAARDEEEAERRERDRIAARRRTAADDAEAERLELAAAATRAERLRIEAAAEAAEDYLRLSPRERNARRVARMLLVEHPHGIPADQIDPERVPLAAIQERLSVGRTVAGEIRQESMLLLHQGYAVQAAQEAAYEPRS
SIO_010081: M877_RS85530
subclass of: SO_0000673
so part of: M877_RS85530
location: complement(5558..7267)
location: region:5558-7267:-1
so has part: feature:5558-7267:-1:exon

WP_281178805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5558-7267:-1:exon

M877_RS79930
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79930
old locus tag: M877_40000
so part of: sequence
location: complement(7473..7955)
location: region:7473-7955:-1
so has part: feature:7473-7955:-1:exon
subclass of: SO_0000010

position:7473:-1
position: 7473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7955:-1
position: 7955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7473-7955:-1:exon

M877_RS79930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79930
old locus tag: M877_40000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHHLEPRPYTSADYLAGAPLTGAVQLHGERQEHDEAVVWVPDAYGRMMPVRRSQADALLAAVPVTAPRDLSPQPLVDSRAQVVLAAGVGTGAAAAGVGYGLGQVLAPLAAIGSSGVLWALALLAVLGTAGRRSSQTTNTYVTNHVQARWWGKSSASTRN
SIO_010081: M877_RS79930
subclass of: SO_0000673
so part of: M877_RS79930
location: complement(7473..7955)
location: region:7473-7955:-1
so has part: feature:7473-7955:-1:exon

WP_023544013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7473-7955:-1:exon

M877_RS79935
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79935
old locus tag: M877_40005
so part of: sequence
location: complement(8140..10260)
location: region:8140-10260:-1
so has part: feature:8140-10260:-1:exon
subclass of: SO_0000010

position:8140:-1
position: 8140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10260:-1
position: 10260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140-10260:-1:exon

M877_RS79935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79935
old locus tag: M877_40005
inference: COORDINATES: protein motif:HMM:NF013727.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MGRRKSAVAAPATSTGTDLMTIGKGFAGYVAAKALPYSAPWIAAGTLPPLAGFVTNAMWGGAPLSAGLASAALAVGGAGLTAVTWKTTPAASKFGAFRRAQATASVAAGMGWLTCAVAAGPFGSPMLDAWLIGGGLFAASWNVRQIVRNGASGDVAEETNGGGLAALASAIGWEKAKIKDAKGSGKGTVKAGVEVTGGGTIPEVQGTAAKVAAVLQVPPSGVIVTPDPENAARGTISLRVADLLKDGVDFAMPSALGLLPTDDIPLGLYADGEVWVLNPFAADILQHVLVMGMTGAGKSEFLRSLVAHLATRRKMSIFVVDVAKGRQSVGHLADGIDWFVQDKKEAKRLLRALPAAIKARADVLADERLDQWTPASSLNAVMVWLEEAADLADFSELDEIARKARSVGIWLGISLQRATWTNMSTDVRANLGGSVCFGVDQPSDAGFCLPDSVTDAGAIPGWGAERPGYAFATGMGIPQDRWTTEVRSGLTEHEVLAALVAAGASVRDPLDEVTATALGQAYAQRTHRGTNRTSPGVPAAPVAPLPAPPAHTAGSAPGPDLSVYDQEADDMLSSEEETAQMEIEEAYDEIMGAIPADPEPDAAYASLRLEDDVPDTDADGEMEFGTDDGDSVSTEQARHMLYLELDGWVRTGRLEFEPADLIPATVAAQRKRPWMQGELKRLTEAGLIQRDSHGSYSILHSPLQPA
SIO_010081: M877_RS79935
subclass of: SO_0000673
so part of: M877_RS79935
location: complement(8140..10260)
location: region:8140-10260:-1
so has part: feature:8140-10260:-1:exon

WP_023544014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8140-10260:-1:exon

M877_RS79940
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79940
old locus tag: M877_40010
so part of: sequence
location: complement(10260..10970)
location: region:10260-10970:-1
so has part: feature:10260-10970:-1:exon
subclass of: SO_0000010

position:10970:-1
position: 10970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10260-10970:-1:exon

M877_RS79940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79940
old locus tag: M877_40010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSSSSGQGGAFHRSERDEERDNLRDHLDARRAQQRADNERDDWRNDEPRVPRASRTSRAATNAGAAAGAAVGAAAGAFVPPITVNLNGNGNRGNGGGNGGAAADGDRHQGDRLIYAIERIELRSDRDILALARAINHLGRELHLILGMRAEEVNGVLSTYKGKWYTFGASSRIKARLVSAHLKVSGEAAKALGVGALKMAHAFNRHFVVPEREAKQRRTGVKTAPKKREFTIGDQ
SIO_010081: M877_RS79940
subclass of: SO_0000673
so part of: M877_RS79940
location: complement(10260..10970)
location: region:10260-10970:-1
so has part: feature:10260-10970:-1:exon

WP_023544015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10260-10970:-1:exon

M877_RS79945
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79945
old locus tag: M877_40015
so part of: sequence
location: complement(10970..11248)
location: region:10970-11248:-1
so has part: feature:10970-11248:-1:exon
subclass of: SO_0000010

position:11248:-1
position: 11248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10970-11248:-1:exon

M877_RS79945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79945
old locus tag: M877_40015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYGSARIELVDRAVYAAGRLARVARLALRLATRTRLTPTDLYAAVATAKFMAAHELVDQAADEIEASADPDVDLTQIRQPSWFGSTTIFEEK
SIO_010081: M877_RS79945
subclass of: SO_0000673
so part of: M877_RS79945
location: complement(10970..11248)
location: region:10970-11248:-1
so has part: feature:10970-11248:-1:exon

WP_023544016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10970-11248:-1:exon

M877_RS79950
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79950
old locus tag: M877_40020
so part of: sequence
location: complement(11272..11457)
location: region:11272-11457:-1
so has part: feature:11272-11457:-1:exon
subclass of: SO_0000010

position:11272:-1
position: 11272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11457:-1
position: 11457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11272-11457:-1:exon

M877_RS79950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79950
old locus tag: M877_40020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGRKNNGASTAETVTRSVVAAGRIVAGERGARVANAITGPVTGRIEICDDPTCKDCAPVR
SIO_010081: M877_RS79950
subclass of: SO_0000673
so part of: M877_RS79950
location: complement(11272..11457)
location: region:11272-11457:-1
so has part: feature:11272-11457:-1:exon

WP_023544017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11272-11457:-1:exon

M877_RS85535
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS85535
old locus tag: M877_40030
so part of: sequence
location: complement(11852..11980)
location: region:11852-11980:-1
so has part: feature:11852-11980:-1:exon
subclass of: SO_0000010

position:11852:-1
position: 11852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11980:-1
position: 11980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11852-11980:-1:exon

M877_RS85535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS85535
old locus tag: M877_40030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTTTTKPPLPVRPEPHERDGRQEPTPAPARPHACFALGVAA
SIO_010081: M877_RS85535
subclass of: SO_0000673
so part of: M877_RS85535
location: complement(11852..11980)
location: region:11852-11980:-1
so has part: feature:11852-11980:-1:exon

WP_023544019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11852-11980:-1:exon

M877_RS79955
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79955
old locus tag: M877_40035
so part of: sequence
location: complement(11977..12453)
location: region:11977-12453:-1
so has part: feature:11977-12453:-1:exon
subclass of: SO_0000010

position:11977:-1
position: 11977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12453:-1
position: 12453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11977-12453:-1:exon

M877_RS79955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79955
old locus tag: M877_40035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSATKPPLAVSIPARISLPSSAWPTVWLATADGLVLIDTIAVERAMNGDRQGWSLSEDEARYAAQIMFEHGVPYSVVASRTGKSVAVIRRWFPGQAVPSVSTARPRNCKPIKCGTTRGYYAHHRRKETPCTECKAANASADRRYRLTGSSKAVTGVAA
SIO_010081: M877_RS79955
subclass of: SO_0000673
so part of: M877_RS79955
location: complement(11977..12453)
location: region:11977-12453:-1
so has part: feature:11977-12453:-1:exon

WP_031232924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11977-12453:-1:exon

M877_RS79960
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79960
old locus tag: M877_40040
so part of: sequence
location: complement(12450..12782)
location: region:12450-12782:-1
so has part: feature:12450-12782:-1:exon
subclass of: SO_0000010

position:12450:-1
position: 12450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12782:-1
position: 12782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12450-12782:-1:exon

M877_RS79960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79960
old locus tag: M877_40040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIMADWPVNAQVVDLVRAGLAEEIERQEREDNDAGPEAEPENTVRSWGRSAARPEDDAARVLLDGWVREYGPMVRRVVARHVRAGDVDLVNDDYERAVDRLASWIGAAA
SIO_010081: M877_RS79960
subclass of: SO_0000673
so part of: M877_RS79960
location: complement(12450..12782)
location: region:12450-12782:-1
so has part: feature:12450-12782:-1:exon

WP_023544021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12450-12782:-1:exon

M877_RS80685
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS80685
old locus tag: M877_40045
so part of: sequence
location: 13008..13760
location: region:13008-13760:1
so has part: feature:13008-13760:1:exon
subclass of: SO_0000010

position:13008:1
position: 13008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13760:1
position: 13760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13008-13760:1:exon

M877_RS80685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS80685
old locus tag: M877_40045
inference: COORDINATES: protein motif:HMM:NF012610.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MNANAIVAEIRNGIAAGQYRYGSRLPSVRDLADQYGVSQQTAAAAYAVLSALGLTRTERGSGTTVAAGPAASAHLGTFTPPDLAAALPWRPAAEGEASEETTLVQQIPAPAELAEWGIEEGADVVERTRIRSVDGTPVQHKITVLPYSVAAQKPDDYEGVPPMLAPVGAPPIKPPHGTRVSDWLGWDVAATECAITAEPMSSAACAALGMPDGSPGFRIVNVTRNSEKKTVYVTITTTPLHHRVTLDIIG
SIO_010081: M877_RS80685
subclass of: SO_0000673
so part of: M877_RS80685
location: 13008..13760
location: region:13008-13760:1
so has part: feature:13008-13760:1:exon

WP_023544022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13008-13760:1:exon

M877_RS79965
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79965
old locus tag: M877_40050
so part of: sequence
location: 14061..15005
location: region:14061-15005:1
so has part: feature:14061-15005:1:exon
subclass of: SO_0000010

position:14061:1
position: 14061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15005:1
position: 15005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14061-15005:1:exon

M877_RS79965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79965
old locus tag: M877_40050
inference: COORDINATES: protein motif:HMM:NF025107.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSYQAQTWVDEVGIKQCLNGGELLVLIRVANHTNGEMRGCYASAETLARECLMGESTVLKHLRRLKAGGALVPGDKELVSHLRADRRPPVYDLAGGHETGCPGGHSVGDVCRVTVTGARSEHPPKKTRATGARSEHPPKKPRSAGARSERPSKETPATGVQIDLSRVFKSSTNSSKDLNSLFSVPAGAFPAQPSQATQDREREAAAPVKPSPADAVVDAYVAALGRPLVNGSKVRLRAQAVELLAAGHSVDWVAARAAEMPAKGWMDLIKHCAAQKPIPGQSQAGSAGGRRERCPEHPARYRKGCVECALAVPV
SIO_010081: M877_RS79965
subclass of: SO_0000673
so part of: M877_RS79965
location: 14061..15005
location: region:14061-15005:1
so has part: feature:14061-15005:1:exon

WP_023544023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14061-15005:1:exon

M877_RS79970
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79970
old locus tag: M877_40055
so part of: sequence
location: 15086..16462
location: region:15086-16462:1
so has part: feature:15086-16462:1:exon
subclass of: SO_0000010

position:15086:1
position: 15086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16462:1
position: 16462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15086-16462:1:exon

M877_RS79970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79970
old locus tag: M877_40055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014158424.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaB-like helicase C-terminal domain-containing protein
translation: MSTSIPAQHDDDVVSGGQPAGFSRVPPQDLDAEQSVIGSLLLSGSPAAPSHRFFAETLETGITAGDYYRPAHATIHRAVCDLRAANEPVDVITAAAELTKRGELARVGGASYLHTCVQAVPTAANGPHYAEIVRAKAYRRGVIESATRIVEYAYSEAGDEAEVRDLVERQLTEIIAGTPGLHEAPPTVGDLYLDFVADLEDVQTGRQLGLPYGFADLDQATSGMQPGNVTVVGAASGVGKSTFALNAAVAAAKTGAPVMFSSLEMSSTELMQKIAAAEGGIALHHMTHEGLLSPEGWEKVRLLGPELFRTLPLRVYRPDGAALGDIASAARACARDGGLALLVVDYLQLVEVEQSRNGTREQAVAAVSRGLKNLSVELNCHVIALSQLNDTGLMRESRAIKNDASVVLKIERPDTDDPFSPRAGEVDLVIEKNRFGPPATITIAAQLHYSRFLDMGLT
SIO_010081: M877_RS79970
subclass of: SO_0000673
so part of: M877_RS79970
location: 15086..16462
location: region:15086-16462:1
so has part: feature:15086-16462:1:exon

WP_023544024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15086-16462:1:exon

M877_RS79975
type: Gene
subclass of: SO_0000704
RO_0002162: 1352941
locus tag: M877_RS79975
old locus tag: M877_40060
so part of: sequence
location: 17419..17649
location: region:17419-17649:1
so has part: feature:17419-17649:1:exon
subclass of: SO_0000010

position:17419:1
position: 17419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17649:1
position: 17649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17419-17649:1:exon

M877_RS79975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1352941
locus tag: M877_RS79975
old locus tag: M877_40060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTGPQTPPPTPPEPQPPAPAPLKDVVVLLAVLVVLLVAGAVAYVMYAHPGAREPLGAALVVVGIFAPLMYSMLRR
SIO_010081: M877_RS79975
subclass of: SO_0000673
so part of: M877_RS79975
location: 17419..17649
location: region:17419-17649:1
so has part: feature:17419-17649:1:exon

WP_023544025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17419-17649:1:exon