Brettanomyces nanus strain CBS 1945 mitochondrion, complete genome.
type: Entry
definition: Brettanomyces nanus strain CBS 1945 mitochondrion, complete genome.
sequence version: NW_024066106.1
sequence date: 2021-02-12
sequence: sequence
division: CON
label: NW_024066106.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA691332
dblink: SAMN12257692
keyword: RefSeq
source: mitochondrion Brettanomyces nanus
organism: Brettanomyces nanus
taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Brettanomyces.
reference: 1
reference: 2
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP064816.\nAnnotated using 1.8.1.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: OCT-2018\nAssembly Method :: Celera Assembler v. Canu v1.7\nAssembly Name :: AWRI2847_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 69606
topology: circular
so has quality: SO_0000988
location: 1..69606
location: region:1-69606:1
RO_0002162: 13502

NW_024066106
type: RefSeq
SIO_000068: refseq

PRJNA691332
type: BioProject
SIO_000068: bioproject

SAMN12257692
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
journal: Submitted (12-FEB-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

2
title: Direct Submission
author: Roach, M.J.R.
journal: Submitted (28-OCT-2020) Research, Australian Wine Research Institute, Adelaide, SA 5064, AUS

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69606:1
position: 69606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-69606:1:source
so part of: sequence
organism: Brettanomyces nanus
organelle: mitochondrion
mol type: genomic DNA
strain: CBS 1945
isolation source: Bottled beer
culture collection: AWRI:2847
type material: type material of Eeniella nana
country: Sweden
collection date: 21-Jan-2014

13502
type: Taxonomy
SIO_000068: taxonomy

FOA43_003202
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003202
so part of: sequence
location: 2452..2523
location: region:2452-2523:1
so has part: feature:2452-2523:1:exon
subclass of: SO_0000663

62196603
type: Gene
SIO_000068: ncbigene

position:2452:1
position: 2452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523:1
position: 2523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452-2523:1:exon

FOA43_003202
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003202
product: tRNA-Val
SIO_010081: FOA43_003202
subclass of: SO_0000673
so part of: FOA43_003202
location: 2452..2523
location: region:2452-2523:1
so has part: feature:2452-2523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452-2523:1:exon

FOA43_003203
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003203
so part of: sequence
location: 22894..22966
location: region:22894-22966:1
so has part: feature:22894-22966:1:exon
subclass of: SO_0000663

62196604
type: Gene
SIO_000068: ncbigene

position:22894:1
position: 22894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22966:1
position: 22966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22894-22966:1:exon

FOA43_003203
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003203
product: tRNA-Thr
SIO_010081: FOA43_003203
subclass of: SO_0000673
so part of: FOA43_003203
location: 22894..22966
location: region:22894-22966:1
so has part: feature:22894-22966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22894-22966:1:exon

FOA43_003205
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003205
so part of: sequence
location: 29478..29551
location: region:29478-29551:1
so has part: feature:29478-29551:1:exon
subclass of: SO_0000663

62196605
type: Gene
SIO_000068: ncbigene

position:29478:1
position: 29478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29551:1
position: 29551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29478-29551:1:exon

FOA43_003205
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003205
product: tRNA-Phe
SIO_010081: FOA43_003205
subclass of: SO_0000673
so part of: FOA43_003205
location: 29478..29551
location: region:29478-29551:1
so has part: feature:29478-29551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29478-29551:1:exon

FOA43_003206
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003206
so part of: sequence
location: 29961..30033
location: region:29961-30033:1
so has part: feature:29961-30033:1:exon
subclass of: SO_0000663

62196606
type: Gene
SIO_000068: ncbigene

position:29961:1
position: 29961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30033:1
position: 30033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29961-30033:1:exon

FOA43_003206
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003206
product: tRNA-Asn
SIO_010081: FOA43_003206
subclass of: SO_0000673
so part of: FOA43_003206
location: 29961..30033
location: region:29961-30033:1
so has part: feature:29961-30033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29961-30033:1:exon

FOA43_003207
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003207
so part of: sequence
location: 30088..30173
location: region:30088-30173:1
so has part: feature:30088-30173:1:exon
subclass of: SO_0000663

62196607
type: Gene
SIO_000068: ncbigene

position:30088:1
position: 30088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30173:1
position: 30173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30088-30173:1:exon

FOA43_003207
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003207
product: tRNA-Ser
SIO_010081: FOA43_003207
subclass of: SO_0000673
so part of: FOA43_003207
location: 30088..30173
location: region:30088-30173:1
so has part: feature:30088-30173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30088-30173:1:exon

FOA43_003208
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003208
so part of: sequence
location: 32466..32536
location: region:32466-32536:1
so has part: feature:32466-32536:1:exon
subclass of: SO_0000663

62196608
type: Gene
SIO_000068: ncbigene

position:32466:1
position: 32466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32536:1
position: 32536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32466-32536:1:exon

FOA43_003208
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003208
product: tRNA-Ala
SIO_010081: FOA43_003208
subclass of: SO_0000673
so part of: FOA43_003208
location: 32466..32536
location: region:32466-32536:1
so has part: feature:32466-32536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32466-32536:1:exon

FOA43_003209
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003209
so part of: sequence
location: 32546..32619
location: region:32546-32619:1
so has part: feature:32546-32619:1:exon
subclass of: SO_0000663

62196609
type: Gene
SIO_000068: ncbigene

position:32546:1
position: 32546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32619:1
position: 32619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32546-32619:1:exon

FOA43_003209
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003209
product: tRNA-Asp
SIO_010081: FOA43_003209
subclass of: SO_0000673
so part of: FOA43_003209
location: 32546..32619
location: region:32546-32619:1
so has part: feature:32546-32619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32546-32619:1:exon

FOA43_003210
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003210
so part of: sequence
location: 34750..34833
location: region:34750-34833:1
so has part: feature:34750-34833:1:exon
subclass of: SO_0000663

62196610
type: Gene
SIO_000068: ncbigene

position:34750:1
position: 34750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34833:1
position: 34833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34750-34833:1:exon

FOA43_003210
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003210
product: tRNA-Leu
SIO_010081: FOA43_003210
subclass of: SO_0000673
so part of: FOA43_003210
location: 34750..34833
location: region:34750-34833:1
so has part: feature:34750-34833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34750-34833:1:exon

FOA43_003211
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003211
so part of: sequence
location: 35358..35430
location: region:35358-35430:1
so has part: feature:35358-35430:1:exon
subclass of: SO_0000663

62196611
type: Gene
SIO_000068: ncbigene

position:35358:1
position: 35358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35430:1
position: 35430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35358-35430:1:exon

FOA43_003211
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003211
product: tRNA-Lys
SIO_010081: FOA43_003211
subclass of: SO_0000673
so part of: FOA43_003211
location: 35358..35430
location: region:35358-35430:1
so has part: feature:35358-35430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35358-35430:1:exon

FOA43_003212
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003212
so part of: sequence
location: 35609..35682
location: region:35609-35682:1
so has part: feature:35609-35682:1:exon
subclass of: SO_0000663

62196612
type: Gene
SIO_000068: ncbigene

position:35609:1
position: 35609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35682:1
position: 35682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35609-35682:1:exon

FOA43_003212
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003212
product: tRNA-Met
SIO_010081: FOA43_003212
subclass of: SO_0000673
so part of: FOA43_003212
location: 35609..35682
location: region:35609-35682:1
so has part: feature:35609-35682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35609-35682:1:exon

FOA43_003213
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003213
so part of: sequence
location: 38623..38693
location: region:38623-38693:1
so has part: feature:38623-38693:1:exon
subclass of: SO_0000663

62196613
type: Gene
SIO_000068: ncbigene

position:38623:1
position: 38623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38693:1
position: 38693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38623-38693:1:exon

FOA43_003213
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003213
product: tRNA-Val
SIO_010081: FOA43_003213
subclass of: SO_0000673
so part of: FOA43_003213
location: 38623..38693
location: region:38623-38693:1
so has part: feature:38623-38693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38623-38693:1:exon

FOA43_003214
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003214
so part of: sequence
location: 59105..59177
location: region:59105-59177:1
so has part: feature:59105-59177:1:exon
subclass of: SO_0000663

62196614
type: Gene
SIO_000068: ncbigene

position:59105:1
position: 59105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59177:1
position: 59177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59105-59177:1:exon

FOA43_003214
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003214
product: tRNA-Thr
SIO_010081: FOA43_003214
subclass of: SO_0000673
so part of: FOA43_003214
location: 59105..59177
location: region:59105-59177:1
so has part: feature:59105-59177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59105-59177:1:exon

FOA43_003215
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003215
so part of: sequence
location: 60503..60575
location: region:60503-60575:1
so has part: feature:60503-60575:1:exon
subclass of: SO_0000663

62196615
type: Gene
SIO_000068: ncbigene

position:60503:1
position: 60503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60575:1
position: 60575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60503-60575:1:exon

FOA43_003215
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003215
product: tRNA-Gly
SIO_010081: FOA43_003215
subclass of: SO_0000673
so part of: FOA43_003215
location: 60503..60575
location: region:60503-60575:1
so has part: feature:60503-60575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60503-60575:1:exon

FOA43_003216
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003216
so part of: sequence
location: 60580..60653
location: region:60580-60653:1
so has part: feature:60580-60653:1:exon
subclass of: SO_0000663

62196616
type: Gene
SIO_000068: ncbigene

position:60580:1
position: 60580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60653:1
position: 60653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60580-60653:1:exon

FOA43_003216
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003216
product: tRNA-Met
SIO_010081: FOA43_003216
subclass of: SO_0000673
so part of: FOA43_003216
location: 60580..60653
location: region:60580-60653:1
so has part: feature:60580-60653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60580-60653:1:exon

FOA43_003217
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003217
so part of: sequence
location: 60666..60737
location: region:60666-60737:1
so has part: feature:60666-60737:1:exon
subclass of: SO_0000663

62196617
type: Gene
SIO_000068: ncbigene

position:60666:1
position: 60666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60737:1
position: 60737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60666-60737:1:exon

FOA43_003217
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003217
product: tRNA-Met
SIO_010081: FOA43_003217
subclass of: SO_0000673
so part of: FOA43_003217
location: 60666..60737
location: region:60666-60737:1
so has part: feature:60666-60737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60666-60737:1:exon

FOA43_003218
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003218
so part of: sequence
location: 65657..65730
location: region:65657-65730:1
so has part: feature:65657-65730:1:exon
subclass of: SO_0000663

62196618
type: Gene
SIO_000068: ncbigene

position:65657:1
position: 65657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65730:1
position: 65730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65657-65730:1:exon

FOA43_003218
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003218
product: tRNA-Phe
SIO_010081: FOA43_003218
subclass of: SO_0000673
so part of: FOA43_003218
location: 65657..65730
location: region:65657-65730:1
so has part: feature:65657-65730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65657-65730:1:exon

FOA43_003219
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003219
so part of: sequence
location: 66132..66204
location: region:66132-66204:1
so has part: feature:66132-66204:1:exon
subclass of: SO_0000663

62196619
type: Gene
SIO_000068: ncbigene

position:66132:1
position: 66132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66204:1
position: 66204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66132-66204:1:exon

FOA43_003219
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003219
product: tRNA-Asn
SIO_010081: FOA43_003219
subclass of: SO_0000673
so part of: FOA43_003219
location: 66132..66204
location: region:66132-66204:1
so has part: feature:66132-66204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66132-66204:1:exon

FOA43_003220
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003220
so part of: sequence
location: 66259..66343
location: region:66259-66343:1
so has part: feature:66259-66343:1:exon
subclass of: SO_0000663

62196620
type: Gene
SIO_000068: ncbigene

position:66259:1
position: 66259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66343:1
position: 66343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66259-66343:1:exon

FOA43_003220
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003220
product: tRNA-Ser
SIO_010081: FOA43_003220
subclass of: SO_0000673
so part of: FOA43_003220
location: 66259..66343
location: region:66259-66343:1
so has part: feature:66259-66343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66259-66343:1:exon

FOA43_003221
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003221
so part of: sequence
location: 68603..68671
location: region:68603-68671:1
so has part: feature:68603-68671:1:exon
subclass of: SO_0000663

62196621
type: Gene
SIO_000068: ncbigene

position:68603:1
position: 68603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68671:1
position: 68671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68603-68671:1:exon

FOA43_003221
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003221
product: tRNA-Ala
SIO_010081: FOA43_003221
subclass of: SO_0000673
so part of: FOA43_003221
location: 68603..68671
location: region:68603-68671:1
so has part: feature:68603-68671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68603-68671:1:exon

FOA43_003222
type: Gene
subclass of: SO_0000704
RO_0002162: 13502
locus tag: FOA43_003222
so part of: sequence
location: 68682..68755
location: region:68682-68755:1
so has part: feature:68682-68755:1:exon
subclass of: SO_0000663

62196622
type: Gene
SIO_000068: ncbigene

position:68682:1
position: 68682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68755:1
position: 68755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68682-68755:1:exon

FOA43_003222
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13502
locus tag: FOA43_003222
product: tRNA-Asp
SIO_010081: FOA43_003222
subclass of: SO_0000673
so part of: FOA43_003222
location: 68682..68755
location: region:68682-68755:1
so has part: feature:68682-68755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68682-68755:1:exon