Corvus hawaiiensis isolate bCorHaw1 chromosome W, bCorHaw1.pri.cur, whole genome shotgun sequence.
type: Entry
definition: Corvus hawaiiensis isolate bCorHaw1 chromosome W, bCorHaw1.pri.cur, whole genome shotgun sequence.
sequence version: NC_063254.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063254.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA838000
dblink: SAMN22550278
keyword: WGS
keyword: RefSeq
source: Corvus hawaiiensis (hawaiian crow)
organism: Corvus hawaiiensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036387.1.\nAssembly name: bCorHaw1.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2021\nAssembly Method :: HiFiasm v. 0.15.4+galaxy; purge_dups v.\n 1.2.5+galaxy3; Bionano Solve v.\n 3.6.1+galaxy2; Salsa v. 2.3+galaxy0;\n gEVAL manual curation v. 2021-09-20; VGP\n pipeline v. 2.0\nAssembly Name :: bCorHaw1.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 29.61x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina NovaSeq;\n Bionano Genomics Saphyr DLS; Arima\n Genomics Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus hawaiiensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6742290
topology: linear
so has quality: SO_0000987
location: 1..6742290
location: region:1-6742290:1
RO_0002162: 134902

NC_063254
type: RefSeq
SIO_000068: refseq

PRJNA838000
type: BioProject
SIO_000068: bioproject

SAMN22550278
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6742290:1
position: 6742290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6742290:1:source
so part of: sequence
organism: Corvus hawaiiensis
mol type: genomic DNA
isolate: bCorHaw1
chromosome: W
sex: female
tissue type: blood
dev stage: adult
country: USA: University of Hawaii at Manoa
lat lon: 21.297467 N 157.818261 W
collection date: 2020-08-08
collected by: Bryce Masuda

134902
type: Taxonomy
SIO_000068: taxonomy

LOC125319353
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24914..48565)
location: region:24914-48565:-1
so has part: feature:24914-48565:-1:exon
subclass of: SO_0000010

125319353
type: Gene
SIO_000068: ncbigene

position:24914:-1
position: 24914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48565:-1
position: 48565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24914-48565:-1:exon

LOC125319353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319353
product: Krueppel-like factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_048290457.1
SIO_010081: LOC125319353
subclass of: SO_0000673
so part of: LOC125319353
location: complement(join(24914..25137,48112..48565))
location: region:24914-48565:-1
so has part: feature:48112-48565:-1:exon
so has part: feature:24914-25137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48112-48565:-1:exon

position:48112:-1
position: 48112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24914-25137:-1:exon

position:25137:-1
position: 25137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 9
translation: MSVVAYMDFVAAQCLVSISNRSAMPEAAQLKGPGEEQVGKDLCDPRDAWKDYCTLVTIAKSLLELNKYRALPVPSVCSGNMESPDEDIGSDSDVTTEPGLSPARDSAPGQRNTVPLKEKLVSEKRHKCPYSGCNKVYGKSSHLKAHYRMHTGERPFPCTWPSCLKKFCRSDELTQHYRTHTGEKQFPCPLCKKRFMRSDHLTKHARRHTEFHPSMIKRSKKSSSL
SIO_010081: LOC125319353
subclass of: SO_0000673
so part of: LOC125319353
location: complement(join(24914..25137,48112..48565))
location: region:24914-48565:-1
so has part: feature:48112-48565:-1:exon
so has part: feature:24914-25137:-1:exon

XP_048146414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48112-48565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24914-25137:-1:exon

LOC125319315
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183251..424041)
location: region:183251-424041:-1
so has part: feature:183251-424041:-1:exon
subclass of: SO_0000010

125319315
type: Gene
SIO_000068: ncbigene

position:183251:-1
position: 183251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424041:-1
position: 424041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183251-424041:-1:exon

LOC125319315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319315
product: ceramide transfer protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048290427.1
SIO_010081: LOC125319315
subclass of: SO_0000673
so part of: LOC125319315
location: complement(join(183251..186003,189513..189649,190956..191085,196091..196219,197546..197616,197729..197861,200626..200721,206424..206516,207519..207605,209032..209124,225742..225899,233822..233905,235461..235599,236362..236469,282307..282423,420848..420982,423652..424041))
location: region:183251-424041:-1
so has part: feature:423652-424041:-1:exon
so has part: feature:420848-420982:-1:exon
so has part: feature:282307-282423:-1:exon
so has part: feature:236362-236469:-1:exon
so has part: feature:235461-235599:-1:exon
so has part: feature:233822-233905:-1:exon
so has part: feature:225742-225899:-1:exon
so has part: feature:209032-209124:-1:exon
so has part: feature:207519-207605:-1:exon
so has part: feature:206424-206516:-1:exon
so has part: feature:200626-200721:-1:exon
so has part: feature:197729-197861:-1:exon
so has part: feature:197546-197616:-1:exon
so has part: feature:196091-196219:-1:exon
so has part: feature:190956-191085:-1:exon
so has part: feature:189513-189649:-1:exon
so has part: feature:183251-186003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423652-424041:-1:exon

position:423652:-1
position: 423652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420848-420982:-1:exon

position:420848:-1
position: 420848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420982:-1
position: 420982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282307-282423:-1:exon

position:282307:-1
position: 282307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282423:-1
position: 282423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236362-236469:-1:exon

position:236362:-1
position: 236362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236469:-1
position: 236469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235461-235599:-1:exon

position:235461:-1
position: 235461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235599:-1
position: 235599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233822-233905:-1:exon

position:233822:-1
position: 233822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233905:-1
position: 233905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:225742-225899:-1:exon

position:225742:-1
position: 225742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225899:-1
position: 225899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209032-209124:-1:exon

position:209032:-1
position: 209032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209124:-1
position: 209124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207519-207605:-1:exon

position:207519:-1
position: 207519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207605:-1
position: 207605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:206424-206516:-1:exon

position:206424:-1
position: 206424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206516:-1
position: 206516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:200626-200721:-1:exon

position:200626:-1
position: 200626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200721:-1
position: 200721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:197729-197861:-1:exon

position:197729:-1
position: 197729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197861:-1
position: 197861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:197546-197616:-1:exon

position:197546:-1
position: 197546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197616:-1
position: 197616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:196091-196219:-1:exon

position:196091:-1
position: 196091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196219:-1
position: 196219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:190956-191085:-1:exon

position:190956:-1
position: 190956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191085:-1
position: 191085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:189513-189649:-1:exon

position:189513:-1
position: 189513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189649:-1
position: 189649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:183251-186003:-1:exon

position:186003:-1
position: 186003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319315
product: ceramide transfer protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048290426.1
SIO_010081: LOC125319315
subclass of: SO_0000673
so part of: LOC125319315
location: complement(join(183251..186003,189513..189649,190956..191085,196091..196219,197546..197616,197729..197861,200626..200721,205767..205841,206424..206516,207519..207605,209032..209124,225742..225899,233822..233905,235461..235599,236362..236469,282307..282423,420848..420982,423652..424041))
location: region:183251-424041:-1
so has part: feature:423652-424041:-1:exon
so has part: feature:420848-420982:-1:exon
so has part: feature:282307-282423:-1:exon
so has part: feature:236362-236469:-1:exon
so has part: feature:235461-235599:-1:exon
so has part: feature:233822-233905:-1:exon
so has part: feature:225742-225899:-1:exon
so has part: feature:209032-209124:-1:exon
so has part: feature:207519-207605:-1:exon
so has part: feature:206424-206516:-1:exon
so has part: feature:205767-205841:-1:exon
so has part: feature:200626-200721:-1:exon
so has part: feature:197729-197861:-1:exon
so has part: feature:197546-197616:-1:exon
so has part: feature:196091-196219:-1:exon
so has part: feature:190956-191085:-1:exon
so has part: feature:189513-189649:-1:exon
so has part: feature:183251-186003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423652-424041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420848-420982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282307-282423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236362-236469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235461-235599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233822-233905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225742-225899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209032-209124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207519-207605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206424-206516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205767-205841:-1:exon

position:205767:-1
position: 205767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205841:-1
position: 205841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:200626-200721:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:197729-197861:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:197546-197616:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:196091-196219:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:190956-191085:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:189513-189649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183251-186003:-1:exon

LOC125319315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide transfer protein-like isoform X2
translation: MSDNQSWNSSGSEDDPETELGLPVELCGVLSKWTNYIHGWQDRWVVLKRNTLSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWVDAIEQHKTESGYASESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLREKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPVMRSDGDFLHNSNSSKEKLFPYVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREESWQKRLDKEIEKRRRIEEAYKNAVTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKMEEQSQSEKVRLYWPISLPSGDAYSGVGTHRFVQKVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCHYFWNVDVRNDWETTIENFHVVENLSDNAIIIYQMHKRVWPASQRDVLYLSAIRKIPAFSENDPETWIVCNFSVEHDSAPMNNRCVRAKINIAMICQTLVSPPEGNKEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF
SIO_010081: LOC125319315
subclass of: SO_0000673
so part of: LOC125319315
location: complement(join(189522..189649,190956..191085,196091..196219,197546..197616,197729..197861,200626..200721,206424..206516,207519..207605,209032..209124,225742..225899,233822..233905,235461..235599,236362..236469,282307..282423,420848..420982,423652..423747))
location: region:189522-423747:-1
so has part: feature:423652-423747:-1:exon
so has part: feature:420848-420982:-1:exon
so has part: feature:282307-282423:-1:exon
so has part: feature:236362-236469:-1:exon
so has part: feature:235461-235599:-1:exon
so has part: feature:233822-233905:-1:exon
so has part: feature:225742-225899:-1:exon
so has part: feature:209032-209124:-1:exon
so has part: feature:207519-207605:-1:exon
so has part: feature:206424-206516:-1:exon
so has part: feature:200626-200721:-1:exon
so has part: feature:197729-197861:-1:exon
so has part: feature:197546-197616:-1:exon
so has part: feature:196091-196219:-1:exon
so has part: feature:190956-191085:-1:exon
so has part: feature:189522-189649:-1:exon

XP_048146384.1
type: Protein
SIO_000068: ncbiprotein

position:189522:-1
position: 189522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423747:-1
position: 423747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423652-423747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420848-420982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282307-282423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236362-236469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235461-235599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233822-233905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225742-225899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209032-209124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207519-207605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206424-206516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200626-200721:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:197729-197861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:197546-197616:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:196091-196219:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190956-191085:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189522-189649:-1:exon

LOC125319315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide transfer protein-like isoform X1
translation: MSDNQSWNSSGSEDDPETELGLPVELCGVLSKWTNYIHGWQDRWVVLKRNTLSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWVDAIEQHKTESGYASESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLREKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPVMRSDGDFLHNSNSSKEKLFPYVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREESWQKRLDKEIEKRRRIEEAYKNAVTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKMEEQSQSEKVRLYWPISLPSGDAYSGVGTHRFVQKPYSRSSSMSSIDLVSAFDVHRFSAQVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCHYFWNVDVRNDWETTIENFHVVENLSDNAIIIYQMHKRVWPASQRDVLYLSAIRKIPAFSENDPETWIVCNFSVEHDSAPMNNRCVRAKINIAMICQTLVSPPEGNKEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF
SIO_010081: LOC125319315
subclass of: SO_0000673
so part of: LOC125319315
location: complement(join(189522..189649,190956..191085,196091..196219,197546..197616,197729..197861,200626..200721,205767..205841,206424..206516,207519..207605,209032..209124,225742..225899,233822..233905,235461..235599,236362..236469,282307..282423,420848..420982,423652..423747))
location: region:189522-423747:-1
so has part: feature:423652-423747:-1:exon
so has part: feature:420848-420982:-1:exon
so has part: feature:282307-282423:-1:exon
so has part: feature:236362-236469:-1:exon
so has part: feature:235461-235599:-1:exon
so has part: feature:233822-233905:-1:exon
so has part: feature:225742-225899:-1:exon
so has part: feature:209032-209124:-1:exon
so has part: feature:207519-207605:-1:exon
so has part: feature:206424-206516:-1:exon
so has part: feature:205767-205841:-1:exon
so has part: feature:200626-200721:-1:exon
so has part: feature:197729-197861:-1:exon
so has part: feature:197546-197616:-1:exon
so has part: feature:196091-196219:-1:exon
so has part: feature:190956-191085:-1:exon
so has part: feature:189522-189649:-1:exon

XP_048146383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423652-423747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420848-420982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282307-282423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236362-236469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235461-235599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233822-233905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225742-225899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209032-209124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207519-207605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206424-206516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205767-205841:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200626-200721:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:197729-197861:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:197546-197616:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:196091-196219:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:190956-191085:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:189522-189649:-1:exon

LOC125319320
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193157..194806
location: region:193157-194806:1
so has part: feature:193157-194806:1:exon
subclass of: SO_0000011

125319320
type: Gene
SIO_000068: ncbigene

position:193157:1
position: 193157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194806:1
position: 194806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193157-194806:1:exon

LOC125319320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319320
product: uncharacterized LOC125319320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_007200662.1
SIO_010081: LOC125319320
subclass of: SO_0000673
so part of: LOC125319320
location: join(193157..193186,194383..194387,194576..194806)
location: region:193157-194806:1
so has part: feature:193157-193186:1:exon
so has part: feature:194383-194387:1:exon
so has part: feature:194576-194806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193157-193186:1:exon

position:193186:1
position: 193186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194383-194387:1:exon

position:194383:1
position: 194383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194387:1
position: 194387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194576-194806:1:exon

position:194576:1
position: 194576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319322
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209231..231245
location: region:209231-231245:1
so has part: feature:209231-231245:1:exon
subclass of: SO_0000011

125319322
type: Gene
SIO_000068: ncbigene

position:209231:1
position: 209231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231245:1
position: 231245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209231-231245:1:exon

LOC125319322
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319322
product: uncharacterized LOC125319322
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007200664.1
SIO_010081: LOC125319322
subclass of: SO_0000673
so part of: LOC125319322
location: join(209231..209346,222811..222816,231235..231245)
location: region:209231-231245:1
so has part: feature:209231-209346:1:exon
so has part: feature:222811-222816:1:exon
so has part: feature:231235-231245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209231-209346:1:exon

position:209346:1
position: 209346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222811-222816:1:exon

position:222811:1
position: 222811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222816:1
position: 222816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231235-231245:1:exon

position:231235:1
position: 231235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319321
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379257..391689)
location: region:379257-391689:-1
so has part: feature:379257-391689:-1:exon
subclass of: SO_0000011

125319321
type: Gene
SIO_000068: ncbigene

position:379257:-1
position: 379257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391689:-1
position: 391689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379257-391689:-1:exon

LOC125319321
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319321
product: uncharacterized LOC125319321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_007200663.1
SIO_010081: LOC125319321
subclass of: SO_0000673
so part of: LOC125319321
location: complement(join(379257..379270,385570..385571,391602..391689))
location: region:379257-391689:-1
so has part: feature:391602-391689:-1:exon
so has part: feature:385570-385571:-1:exon
so has part: feature:379257-379270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391602-391689:-1:exon

position:391602:-1
position: 391602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385570-385571:-1:exon

position:385570:-1
position: 385570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385571:-1
position: 385571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379257-379270:-1:exon

position:379270:-1
position: 379270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319313
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 769130..945957
location: region:769130-945957:1
so has part: feature:769130-945957:1:exon
subclass of: SO_0000010

125319313
type: Gene
SIO_000068: ncbigene

position:769130:1
position: 769130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945957:1
position: 945957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769130-945957:1:exon

LOC125319313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319313
product: nipped-B-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048290423.1
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(769130..769466,819727..819870,821543..821708,822819..822949,830356..830455,831388..831539,832615..832775,837953..838046,863625..864257,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945957)
location: region:769130-945957:1
so has part: feature:769130-769466:1:exon
so has part: feature:819727-819870:1:exon
so has part: feature:821543-821708:1:exon
so has part: feature:822819-822949:1:exon
so has part: feature:830356-830455:1:exon
so has part: feature:831388-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:863625-864257:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769130-769466:1:exon

position:769466:1
position: 769466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819727-819870:1:exon

position:819727:1
position: 819727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819870:1
position: 819870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:821543-821708:1:exon

position:821543:1
position: 821543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821708:1
position: 821708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822819-822949:1:exon

position:822819:1
position: 822819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822949:1
position: 822949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:830356-830455:1:exon

position:830356:1
position: 830356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830455:1
position: 830455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831388-831539:1:exon

position:831388:1
position: 831388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831539:1
position: 831539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:832615-832775:1:exon

position:832615:1
position: 832615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832775:1
position: 832775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:837953-838046:1:exon

position:837953:1
position: 837953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838046:1
position: 838046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:863625-864257:1:exon

position:863625:1
position: 863625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864257:1
position: 864257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878514-880016:1:exon

position:878514:1
position: 878514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880016:1
position: 880016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:895104-895286:1:exon

position:895104:1
position: 895104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895286:1
position: 895286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:897612-897809:1:exon

position:897612:1
position: 897612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897809:1
position: 897809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:897957-898028:1:exon

position:897957:1
position: 897957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898028:1
position: 898028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:898113-898202:1:exon

position:898113:1
position: 898113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898202:1
position: 898202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:900174-900277:1:exon

position:900174:1
position: 900174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900277:1
position: 900277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:902231-902317:1:exon

position:902231:1
position: 902231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902317:1
position: 902317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:904960-905191:1:exon

position:904960:1
position: 904960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905191:1
position: 905191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:905478-905629:1:exon

position:905478:1
position: 905478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905629:1
position: 905629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:905985-906065:1:exon

position:905985:1
position: 905985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906065:1
position: 906065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:907137-907237:1:exon

position:907137:1
position: 907137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907237:1
position: 907237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:910452-910590:1:exon

position:910452:1
position: 910452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910590:1
position: 910590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:910795-910877:1:exon

position:910795:1
position: 910795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910877:1
position: 910877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:911923-912055:1:exon

position:911923:1
position: 911923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912055:1
position: 912055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:913862-914005:1:exon

position:913862:1
position: 913862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914005:1
position: 914005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:919216-919305:1:exon

position:919216:1
position: 919216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919305:1
position: 919305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:919545-919759:1:exon

position:919545:1
position: 919545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919759:1
position: 919759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:919856-919958:1:exon

position:919856:1
position: 919856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919958:1
position: 919958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:920697-920795:1:exon

position:920697:1
position: 920697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920795:1
position: 920795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:920901-921047:1:exon

position:920901:1
position: 920901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921047:1
position: 921047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:922807-922941:1:exon

position:922807:1
position: 922807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922941:1
position: 922941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:924193-924291:1:exon

position:924193:1
position: 924193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924291:1
position: 924291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:925481-925534:1:exon

position:925481:1
position: 925481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925534:1
position: 925534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:926695-926803:1:exon

position:926695:1
position: 926695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926803:1
position: 926803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:927367-927503:1:exon

position:927367:1
position: 927367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927503:1
position: 927503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:928826-928966:1:exon

position:928826:1
position: 928826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928966:1
position: 928966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:929291-929384:1:exon

position:929291:1
position: 929291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929384:1
position: 929384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:929485-929639:1:exon

position:929485:1
position: 929485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929639:1
position: 929639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:929901-929991:1:exon

position:929901:1
position: 929901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929991:1
position: 929991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:933264-933437:1:exon

position:933264:1
position: 933264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933437:1
position: 933437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:933975-934165:1:exon

position:933975:1
position: 933975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934165:1
position: 934165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:935937-936044:1:exon

position:935937:1
position: 935937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936044:1
position: 936044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:940253-940453:1:exon

position:940253:1
position: 940253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940453:1
position: 940453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:940855-941001:1:exon

position:940855:1
position: 940855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941001:1
position: 941001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:942695-942990:1:exon

position:942695:1
position: 942695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942990:1
position: 942990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:943321-943495:1:exon

position:943321:1
position: 943321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943495:1
position: 943495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:944139-944324:1:exon

position:944139:1
position: 944139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944324:1
position: 944324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:944886-945957:1:exon

position:944886:1
position: 944886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319313
product: nipped-B-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048290425.1
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(769130..769466,819727..819870,821543..821708,822819..822949,830356..830455,831388..831539,832615..832775,837953..838046,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945957)
location: region:769130-945957:1
so has part: feature:769130-769466:1:exon
so has part: feature:819727-819870:1:exon
so has part: feature:821543-821708:1:exon
so has part: feature:822819-822949:1:exon
so has part: feature:830356-830455:1:exon
so has part: feature:831388-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769130-769466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819727-819870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:821543-821708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822819-822949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830356-830455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831388-831539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832615-832775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:837953-838046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878514-880016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:895104-895286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897612-897809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897957-898028:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898113-898202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:900174-900277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902231-902317:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:904960-905191:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:905478-905629:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:905985-906065:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:907137-907237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:910452-910590:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:910795-910877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911923-912055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:913862-914005:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:919216-919305:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:919545-919759:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919856-919958:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:920697-920795:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:920901-921047:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:922807-922941:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:924193-924291:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:925481-925534:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:926695-926803:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:927367-927503:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:928826-928966:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:929291-929384:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:929485-929639:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:929901-929991:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:933264-933437:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:933975-934165:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:935937-936044:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:940253-940453:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:940855-941001:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:942695-942990:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:943321-943495:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:944139-944324:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:944886-945957:1:exon

LOC125319313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nipped-B-like protein isoform X1
translation: MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDENLVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQSGMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYAPQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNSRHSSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKGSRQPLIQQSQPPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLRLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNTAQCLLQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIERIERESAIERERFSKEVQDKDKPLKKRKQENKPQEVGGATGGNITASQETGSAGNGARPALMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQYNDGFVCVPQEDTVGVLKFKPENHPEIFRKMSDFGGQKTDIQQNENRQMEFQQNVSRRLESKQNEKKQVEAKRESKHESRQMEVKQNENRQTDSKQNQSRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPEMPKHRHDNKRDSSKPLSDKKIEISRHKLDVKSDPSRIKSESRPDPTKQKPDGRSVSDTPRRDHDSLKQRSEDREESEKYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFARKHRHESGESRERFSSGDQKSRPDSPRIKQEGRGDSSKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAHADSKAEFPSYLLGARSGALKHFVIPKIKRDKDVNVTQESRKTEFKGEQDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDQSVLKELPPDLLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEEHDRRSSGDHRRSGYCHEGRRTSASGRYRNRSPNDSEMDDYSSPPSLSEVARRMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDIIERVIQYTKFHSQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGGDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHRAENRKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQN…
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(819807..819870,821543..821708,822819..822949,830356..830455,831388..831539,832615..832775,837953..838046,863625..864257,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945251)
location: region:819807-945251:1
so has part: feature:819807-819870:1:exon
so has part: feature:821543-821708:1:exon
so has part: feature:822819-822949:1:exon
so has part: feature:830356-830455:1:exon
so has part: feature:831388-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:863625-864257:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945251:1:exon

XP_048146380.1
type: Protein
SIO_000068: ncbiprotein

position:819807:1
position: 819807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945251:1
position: 945251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819807-819870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821543-821708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822819-822949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830356-830455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831388-831539:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832615-832775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837953-838046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:863625-864257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878514-880016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:895104-895286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897612-897809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897957-898028:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898113-898202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:900174-900277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902231-902317:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:904960-905191:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:905478-905629:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:905985-906065:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:907137-907237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:910452-910590:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:910795-910877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911923-912055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:913862-914005:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:919216-919305:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:919545-919759:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919856-919958:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:920697-920795:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:920901-921047:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:922807-922941:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:924193-924291:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:925481-925534:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:926695-926803:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:927367-927503:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:928826-928966:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:929291-929384:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:929485-929639:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:929901-929991:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:933264-933437:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:933975-934165:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:935937-936044:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:940253-940453:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:940855-941001:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:942695-942990:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:943321-943495:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:944139-944324:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:944886-945251:1:exon

LOC125319313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nipped-B-like protein isoform X3
translation: MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDENLVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQSGMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYAPQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNSRHSSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKDKPLKKRKQENKPQEVGGATGGNITASQETGSAGNGARPALMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQYNDGFVCVPQEDTVGVLKFKPENHPEIFRKMSDFGGQKTDIQQNENRQMEFQQNVSRRLESKQNEKKQVEAKRESKHESRQMEVKQNENRQTDSKQNQSRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPEMPKHRHDNKRDSSKPLSDKKIEISRHKLDVKSDPSRIKSESRPDPTKQKPDGRSVSDTPRRDHDSLKQRSEDREESEKYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFARKHRHESGESRERFSSGDQKSRPDSPRIKQEGRGDSSKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAHADSKAEFPSYLLGARSGALKHFVIPKIKRDKDVNVTQESRKTEFKGEQDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDQSVLKELPPDLLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEEHDRRSSGDHRRSGYCHEGRRTSASGRYRNRSPNDSEMDDYSSPPSLSEVARRMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDIIERVIQYTKFHSQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGGDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHRAENRKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQ…
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(819807..819870,821543..821708,822819..822949,830356..830455,831388..831539,832615..832775,837953..838046,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945251)
location: region:819807-945251:1
so has part: feature:819807-819870:1:exon
so has part: feature:821543-821708:1:exon
so has part: feature:822819-822949:1:exon
so has part: feature:830356-830455:1:exon
so has part: feature:831388-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945251:1:exon

XP_048146382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:819807-819870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821543-821708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822819-822949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830356-830455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831388-831539:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832615-832775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837953-838046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878514-880016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895104-895286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:897612-897809:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897957-898028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898113-898202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:900174-900277:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:902231-902317:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:904960-905191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:905478-905629:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:905985-906065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907137-907237:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:910452-910590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:910795-910877:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:911923-912055:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:913862-914005:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:919216-919305:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:919545-919759:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:919856-919958:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:920697-920795:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:920901-921047:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:922807-922941:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:924193-924291:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:925481-925534:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:926695-926803:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:927367-927503:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:928826-928966:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:929291-929384:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:929485-929639:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:929901-929991:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:933264-933437:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:933975-934165:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:935937-936044:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:940253-940453:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:940855-941001:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:942695-942990:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:943321-943495:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:944139-944324:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:944886-945251:1:exon

LOC125319313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319313
product: nipped-B-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048290424.1
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(822867..822949,831388..831539,832615..832775,837953..838046,863625..864257,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945957)
location: region:822867-945957:1
so has part: feature:822867-822949:1:exon
so has part: feature:831388-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:863625-864257:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945957:1:exon

position:822867:1
position: 822867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822867-822949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831388-831539:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832615-832775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837953-838046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863625-864257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:878514-880016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895104-895286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:897612-897809:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:897957-898028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:898113-898202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900174-900277:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:902231-902317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:904960-905191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905478-905629:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:905985-906065:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907137-907237:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:910452-910590:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:910795-910877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911923-912055:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913862-914005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:919216-919305:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:919545-919759:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:919856-919958:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:920697-920795:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:920901-921047:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:922807-922941:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:924193-924291:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:925481-925534:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:926695-926803:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:927367-927503:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:928826-928966:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:929291-929384:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:929485-929639:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:929901-929991:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:933264-933437:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:933975-934165:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:935937-936044:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:940253-940453:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:940855-941001:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:942695-942990:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:943321-943495:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:944139-944324:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:944886-945957:1:exon

LOC125319313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nipped-B-like protein isoform X2
translation: MPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNSRHSSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKGSRQPLIQQSQPPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLRLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNTAQCLLQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIERIERESAIERERFSKEVQDKDKPLKKRKQENKPQEVGGATGGNITASQETGSAGNGARPALMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQYNDGFVCVPQEDTVGVLKFKPENHPEIFRKMSDFGGQKTDIQQNENRQMEFQQNVSRRLESKQNEKKQVEAKRESKHESRQMEVKQNENRQTDSKQNQSRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPEMPKHRHDNKRDSSKPLSDKKIEISRHKLDVKSDPSRIKSESRPDPTKQKPDGRSVSDTPRRDHDSLKQRSEDREESEKYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFARKHRHESGESRERFSSGDQKSRPDSPRIKQEGRGDSSKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAHADSKAEFPSYLLGARSGALKHFVIPKIKRDKDVNVTQESRKTEFKGEQDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDQSVLKELPPDLLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEEHDRRSSGDHRRSGYCHEGRRTSASGRYRNRSPNDSEMDDYSSPPSLSEVARRMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDIIERVIQYTKFHSQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGGDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHRAENRKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCS…
SIO_010081: LOC125319313
subclass of: SO_0000673
so part of: LOC125319313
location: join(831488..831539,832615..832775,837953..838046,863625..864257,878514..880016,895104..895286,897612..897809,897957..898028,898113..898202,900174..900277,902231..902317,904960..905191,905478..905629,905985..906065,907137..907237,910452..910590,910795..910877,911923..912055,913862..914005,919216..919305,919545..919759,919856..919958,920697..920795,920901..921047,922807..922941,924193..924291,925481..925534,926695..926803,927367..927503,928826..928966,929291..929384,929485..929639,929901..929991,933264..933437,933975..934165,935937..936044,940253..940453,940855..941001,942695..942990,943321..943495,944139..944324,944886..945251)
location: region:831488-945251:1
so has part: feature:831488-831539:1:exon
so has part: feature:832615-832775:1:exon
so has part: feature:837953-838046:1:exon
so has part: feature:863625-864257:1:exon
so has part: feature:878514-880016:1:exon
so has part: feature:895104-895286:1:exon
so has part: feature:897612-897809:1:exon
so has part: feature:897957-898028:1:exon
so has part: feature:898113-898202:1:exon
so has part: feature:900174-900277:1:exon
so has part: feature:902231-902317:1:exon
so has part: feature:904960-905191:1:exon
so has part: feature:905478-905629:1:exon
so has part: feature:905985-906065:1:exon
so has part: feature:907137-907237:1:exon
so has part: feature:910452-910590:1:exon
so has part: feature:910795-910877:1:exon
so has part: feature:911923-912055:1:exon
so has part: feature:913862-914005:1:exon
so has part: feature:919216-919305:1:exon
so has part: feature:919545-919759:1:exon
so has part: feature:919856-919958:1:exon
so has part: feature:920697-920795:1:exon
so has part: feature:920901-921047:1:exon
so has part: feature:922807-922941:1:exon
so has part: feature:924193-924291:1:exon
so has part: feature:925481-925534:1:exon
so has part: feature:926695-926803:1:exon
so has part: feature:927367-927503:1:exon
so has part: feature:928826-928966:1:exon
so has part: feature:929291-929384:1:exon
so has part: feature:929485-929639:1:exon
so has part: feature:929901-929991:1:exon
so has part: feature:933264-933437:1:exon
so has part: feature:933975-934165:1:exon
so has part: feature:935937-936044:1:exon
so has part: feature:940253-940453:1:exon
so has part: feature:940855-941001:1:exon
so has part: feature:942695-942990:1:exon
so has part: feature:943321-943495:1:exon
so has part: feature:944139-944324:1:exon
so has part: feature:944886-945251:1:exon

XP_048146381.1
type: Protein
SIO_000068: ncbiprotein

position:831488:1
position: 831488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831488-831539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832615-832775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837953-838046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863625-864257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878514-880016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895104-895286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897612-897809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:897957-898028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:898113-898202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900174-900277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:902231-902317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904960-905191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905478-905629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905985-906065:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:907137-907237:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:910452-910590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:910795-910877:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:911923-912055:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:913862-914005:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:919216-919305:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:919545-919759:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:919856-919958:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:920697-920795:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:920901-921047:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:922807-922941:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:924193-924291:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:925481-925534:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:926695-926803:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:927367-927503:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:928826-928966:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:929291-929384:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:929485-929639:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:929901-929991:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:933264-933437:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:933975-934165:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:935937-936044:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:940253-940453:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:940855-941001:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:942695-942990:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:943321-943495:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:944139-944324:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:944886-945251:1:exon

LOC125319318
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1022338..1023305)
location: region:1022338-1023305:-1
so has part: feature:1022338-1023305:-1:exon
subclass of: SO_0000010

125319318
type: Gene
SIO_000068: ncbigene

position:1022338:-1
position: 1022338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023305:-1
position: 1023305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022338-1023305:-1:exon

LOC125319318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319318
product: olfactory receptor 14J1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290431.1
SIO_010081: LOC125319318
subclass of: SO_0000673
so part of: LOC125319318
location: complement(1022338..1023305)
location: region:1022338-1023305:-1
so has part: feature:1022338-1023305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022338-1023305:-1:exon

LOC125319318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSSISHFLLLALADTWQLQLLHFCLFLSISLAALLGNGLIISAGACSQHLHSPMFFFLLSLALTDLGSICTTLPKAMHNSLWGIRHISYSACAAQVFLFVFFMGVEVSLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLYALMHTANTFSLPLCQGNALGQLFCEIPHILKLSCSKSHLRELGLIAVSVCLLFGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHLAVLSLFVSTAMFAHLKPPSISSPSLDVALSVLYSVVPPALNPLIYSLRNQELRDALRKMMTGFFQQQ
SIO_010081: LOC125319318
subclass of: SO_0000673
so part of: LOC125319318
location: complement(1022358..1023290)
location: region:1022358-1023290:-1
so has part: feature:1022358-1023290:-1:exon

XP_048146388.1
type: Protein
SIO_000068: ncbiprotein

position:1022358:-1
position: 1022358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023290:-1
position: 1023290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022358-1023290:-1:exon

LOC125319325
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1067250..1070347
location: region:1067250-1070347:1
so has part: feature:1067250-1070347:1:exon

125319325
type: Gene
SIO_000068: ncbigene

position:1067250:1
position: 1067250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070347:1
position: 1070347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067250-1070347:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1067250..1067493
location: region:1067250-1067493:1
so has part: feature:1067250-1067493:1:exon

position:1067493:1
position: 1067493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067250-1067493:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1067760..1067943
location: region:1067760-1067943:1
so has part: feature:1067760-1067943:1:exon

position:1067760:1
position: 1067760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067943:1
position: 1067943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067760-1067943:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1068251..1068521
location: region:1068251-1068521:1
so has part: feature:1068251-1068521:1:exon

position:1068251:1
position: 1068251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068521:1
position: 1068521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068251-1068521:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1068613..1068663
location: region:1068613-1068663:1
so has part: feature:1068613-1068663:1:exon

position:1068613:1
position: 1068613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068663:1
position: 1068663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068613-1068663:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1068974..1069340
location: region:1068974-1069340:1
so has part: feature:1068974-1069340:1:exon

position:1068974:1
position: 1068974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069340:1
position: 1069340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068974-1069340:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1069743..1069919
location: region:1069743-1069919:1
so has part: feature:1069743-1069919:1:exon

position:1069743:1
position: 1069743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069919:1
position: 1069919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069743-1069919:1:exon

LOC125319325
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319325
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125319325
subclass of: SO_0000673
so part of: LOC125319325
location: 1070244..1070347
location: region:1070244-1070347:1
so has part: feature:1070244-1070347:1:exon

position:1070244:1
position: 1070244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070244-1070347:1:exon

LOC125319319
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1074842..1077704)
location: region:1074842-1077704:-1
so has part: feature:1074842-1077704:-1:exon
subclass of: SO_0000011

125319319
type: Gene
SIO_000068: ncbigene

position:1074842:-1
position: 1074842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077704:-1
position: 1077704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074842-1077704:-1:exon

LOC125319319
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319319
product: uncharacterized LOC125319319
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_007200661.1
SIO_010081: LOC125319319
subclass of: SO_0000673
so part of: LOC125319319
location: complement(join(1074842..1074976,1075634..1075636,1077267..1077704))
location: region:1074842-1077704:-1
so has part: feature:1077267-1077704:-1:exon
so has part: feature:1075634-1075636:-1:exon
so has part: feature:1074842-1074976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077267-1077704:-1:exon

position:1077267:-1
position: 1077267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075634-1075636:-1:exon

position:1075634:-1
position: 1075634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075636:-1
position: 1075636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074842-1074976:-1:exon

position:1074976:-1
position: 1074976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319316
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1274368..1276182
location: region:1274368-1276182:1
so has part: feature:1274368-1276182:1:exon
subclass of: SO_0000010

125319316
type: Gene
SIO_000068: ncbigene

position:1274368:1
position: 1274368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276182:1
position: 1276182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274368-1276182:1:exon

LOC125319316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319316
product: endogenous retrovirus group 3 member 1 Env polyprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048290429.1
SIO_010081: LOC125319316
subclass of: SO_0000673
so part of: LOC125319316
location: join(1274368..1275803,1276132..1276182)
location: region:1274368-1276182:1
so has part: feature:1274368-1275803:1:exon
so has part: feature:1276132-1276182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1274368-1275803:1:exon

position:1275803:1
position: 1275803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1276132-1276182:1:exon

position:1276132:1
position: 1276132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endogenous retrovirus group 3 member 1 Env polyprotein-like
translation: MSFQKPEITEEEPAEGEKPKERTKEAKMTSPTSRGNPNANNCSRVCLKGKVSNILLLNVICLWVLWPPFTQAADSRCNKCYKTVYQAEGSSFQIRHFFRAHTYVNPSCYNITELGICSEKGHKYWIGKNIGTQTHKQKGECPSQDNWLCFNFRYITRTEDLLKRKTYDTDLIQEVVIEEKEKQKENNPLMSRKNLFIDLAERIGKQLNLTNCWVCGGTLESESWPWRGVSLGPPDLLRLSNLSPTTRHDNETWLLSNSVIGEECIWRKGRKFLEEVGETICKRYLVTDGQKHWWIPQEPDIFWSAEKIKNKNCIFNPVKKLWQCWDQGNPYSVLPQISKYWITAASVQPHFWEAPQDLYWICGNRAYSSLPPRWKGSCTLGAIQPNFFLLAENAGAHLGISLYDELSRTKRHVIGGTQRWGEEEWPAERILETYEPATWAQDGS
SIO_010081: LOC125319316
subclass of: SO_0000673
so part of: LOC125319316
location: 1274409..1275743
location: region:1274409-1275743:1
so has part: feature:1274409-1275743:1:exon

XP_048146386.1
type: Protein
SIO_000068: ncbiprotein

position:1274409:1
position: 1274409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275743:1
position: 1275743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274409-1275743:1:exon

LOC125319326
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319326
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1304560..1308990)
location: region:1304560-1308990:-1
so has part: feature:1304560-1308990:-1:exon
subclass of: SO_0000010

125319326
type: Gene
SIO_000068: ncbigene

position:1304560:-1
position: 1304560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308990:-1
position: 1308990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304560-1308990:-1:exon

LOC125319326
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319326
product: uncharacterized LOC125319326
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290434.1
SIO_010081: LOC125319326
subclass of: SO_0000673
so part of: LOC125319326
location: complement(join(1304560..1306712,1308456..1308990))
location: region:1304560-1308990:-1
so has part: feature:1308456-1308990:-1:exon
so has part: feature:1304560-1306712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1308456-1308990:-1:exon

position:1308456:-1
position: 1308456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1304560-1306712:-1:exon

position:1306712:-1
position: 1306712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319326
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319326
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1306210..1306212),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC125319326
translation: MGGGSPHPVQPPGQPARGGGGVVAPLPPPPPPPPPAGQPAQVGVGDGGAVAPPPPPPPPTPPPGQPAQGGDGGVVAPPPPPPPPPGQPAQGGDGGAVAPPPPPPPPTSLPRRPTQVGAGDGGAVAPPLLPPPLPSPPPLSPPLSGWGQGRGQAAGSKPEERHRAPPRPASSGAEGGRGGRVLLEKLETEIKFSKEGGVKVIIPESKIIEAAAILVQECHGKIPKEVEEAVIQIVWANDSPGRYKKAEAVSITLKAGATPVRQRQYPLKLEARKGLVPVIEKFLKFELLVESESRYNTPILPVKKADGKSYRLVQDLREINKITEDIHPVVANPYTLLTTLTNELGXFTVLDLKDAFFCIPVHKNSQELFAFEWENPETGRKTQLTWTVLPQGFKNSPTIFGNQLAKELEDWRKQEPGGAVLQYVDDILIAAKTRDDCIELTVSLLNFLGQSGYWGSKEKAQVARETVVYLGLEIFRGHRQLSRERKEAICRLPEPHTVREMQAFLGMVGWCRLWISNYGLLVRPLYEVLKAAEKGKIMWTENARAAFKQLKHSLMSAPALGLPDLTKPFELFTHERLNVALGVLAQHLGDQRRAGAYFSKQLDNVAQGWPGCLKAVAATVLLIQEAHKFTLGQHIVVYVPHAVINVLEQKGGHCLSPSRMLKYQSVLLEQDDVTLKTTSVVNPAMFLSSTLLDSVPEHDCLQTIEETYSSRPDLKDVPLKDPDWELYTDGSSFMRNGRRMTGYAVTTSDKIIEVKALPPDVSSQKAKLIALTRALELSEGRKVNIWTDSKYAFSVVHAHGAIWKERGLLTAQGNEVKHAKQILALLQSIWKPTEVAIMHCKGHQKGKTAPELGNRFADKTARGIAEKGIFAVVPQKEINLSSFTPKYNQRDHKLI
SIO_010081: LOC125319326
subclass of: SO_0000673
so part of: LOC125319326
location: complement(join(1304560..1306712,1308456..1308990))
location: region:1304560-1308990:-1
so has part: feature:1308456-1308990:-1:exon
so has part: feature:1304560-1306712:-1:exon

XP_048146391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1308456-1308990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304560-1306712:-1:exon

LOC125319317
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1378291..1395974
location: region:1378291-1395974:1
so has part: feature:1378291-1395974:1:exon
subclass of: SO_0000010

125319317
type: Gene
SIO_000068: ncbigene

position:1378291:1
position: 1378291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395974:1
position: 1395974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378291-1395974:1:exon

LOC125319317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319317
product: arrestin domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048290430.1
SIO_010081: LOC125319317
subclass of: SO_0000673
so part of: LOC125319317
location: join(1378291..1378674,1382347..1382428,1386495..1386642,1387875..1387977,1388437..1388693,1389110..1389272,1390091..1390245,1395815..1395974)
location: region:1378291-1395974:1
so has part: feature:1378291-1378674:1:exon
so has part: feature:1382347-1382428:1:exon
so has part: feature:1386495-1386642:1:exon
so has part: feature:1387875-1387977:1:exon
so has part: feature:1388437-1388693:1:exon
so has part: feature:1389110-1389272:1:exon
so has part: feature:1390091-1390245:1:exon
so has part: feature:1395815-1395974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378291-1378674:1:exon

position:1378674:1
position: 1378674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382347-1382428:1:exon

position:1382347:1
position: 1382347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382428:1
position: 1382428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1386495-1386642:1:exon

position:1386495:1
position: 1386495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386642:1
position: 1386642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1387875-1387977:1:exon

position:1387875:1
position: 1387875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387977:1
position: 1387977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1388437-1388693:1:exon

position:1388437:1
position: 1388437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388693:1
position: 1388693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1389110-1389272:1:exon

position:1389110:1
position: 1389110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389272:1
position: 1389272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1390091-1390245:1:exon

position:1390091:1
position: 1390091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390245:1
position: 1390245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1395815-1395974:1:exon

position:1395815:1
position: 1395815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arrestin domain-containing protein 3-like
translation: MVLGKVKSLTISFDYLSNSNIPVYSSGDTVSGRISLEVTGEIRVKALKIHARGHAKVRWSESRNAGSNTAYTQNYTEEVEYFNHKDVLVGHARDDDNSEEGLHTIHSGRHEYAFSFELPQIPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKTLCCWLCTSGPISLSAKIERKGYTPGESIQIFAEIENCSSRMVVPKATIYQTQAFYAKGKMKEVRQLVANLRGESLSSGKTETWNGKQLKIPPVSPSILDCSIIRVEYSLMVYVDIPGAVDLFLNLPLVIGTIPLHPFGSRTSSVSSQGSMNMNWLGLTLPERLEAPPSYAEVVTEENRQSGLAPVAAFDDFQRALQGPLFAYIQEFRFLPPPLYSEGQFSSTSS
SIO_010081: LOC125319317
subclass of: SO_0000673
so part of: LOC125319317
location: join(1378395..1378674,1382347..1382428,1386495..1386642,1387875..1387977,1388437..1388693,1389110..1389272,1390091..1390245,1395815..1395841)
location: region:1378395-1395841:1
so has part: feature:1378395-1378674:1:exon
so has part: feature:1382347-1382428:1:exon
so has part: feature:1386495-1386642:1:exon
so has part: feature:1387875-1387977:1:exon
so has part: feature:1388437-1388693:1:exon
so has part: feature:1389110-1389272:1:exon
so has part: feature:1390091-1390245:1:exon
so has part: feature:1395815-1395841:1:exon

XP_048146387.1
type: Protein
SIO_000068: ncbiprotein

position:1378395:1
position: 1378395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395841:1
position: 1395841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378395-1378674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382347-1382428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1386495-1386642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1387875-1387977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1388437-1388693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1389110-1389272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1390091-1390245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1395815-1395841:1:exon

LOC125319327
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1433321..1446374)
location: region:1433321-1446374:-1
so has part: feature:1433321-1446374:-1:exon

125319327
type: Gene
SIO_000068: ncbigene

position:1433321:-1
position: 1433321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446374:-1
position: 1446374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433321-1446374:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1433321..1433963)
location: region:1433321-1433963:-1
so has part: feature:1433321-1433963:-1:exon

position:1433963:-1
position: 1433963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433321-1433963:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1434999..1435881)
location: region:1434999-1435881:-1
so has part: feature:1434999-1435881:-1:exon

position:1434999:-1
position: 1434999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435881:-1
position: 1435881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434999-1435881:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1436390..1436676)
location: region:1436390-1436676:-1
so has part: feature:1436390-1436676:-1:exon

position:1436390:-1
position: 1436390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436676:-1
position: 1436676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436390-1436676:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1437024..1437189)
location: region:1437024-1437189:-1
so has part: feature:1437024-1437189:-1:exon

position:1437024:-1
position: 1437024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437189:-1
position: 1437189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437024-1437189:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1437477..1437563)
location: region:1437477-1437563:-1
so has part: feature:1437477-1437563:-1:exon

position:1437477:-1
position: 1437477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437563:-1
position: 1437563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437477-1437563:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1437756..1437860)
location: region:1437756-1437860:-1
so has part: feature:1437756-1437860:-1:exon

position:1437756:-1
position: 1437756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437860:-1
position: 1437860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437756-1437860:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1439232..1439455)
location: region:1439232-1439455:-1
so has part: feature:1439232-1439455:-1:exon

position:1439232:-1
position: 1439232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439455:-1
position: 1439455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439232-1439455:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1439964..1440236)
location: region:1439964-1440236:-1
so has part: feature:1439964-1440236:-1:exon

position:1439964:-1
position: 1439964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440236:-1
position: 1440236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439964-1440236:-1:exon

LOC125319327
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC125319327
subclass of: SO_0000673
so part of: LOC125319327
location: complement(1446124..1446374)
location: region:1446124-1446374:-1
so has part: feature:1446124-1446374:-1:exon

position:1446124:-1
position: 1446124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446124-1446374:-1:exon

LOC125319354
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1649475..1787420
location: region:1649475-1787420:1
so has part: feature:1649475-1787420:1:exon
subclass of: SO_0000010

125319354
type: Gene
SIO_000068: ncbigene

position:1649475:1
position: 1649475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787420:1
position: 1787420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649475-1787420:1:exon

LOC125319354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319354
product: guanine nucleotide-binding protein G(q) subunit alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290458.1
SIO_010081: LOC125319354
subclass of: SO_0000673
so part of: LOC125319354
location: join(1649475..1649654,1705867..1706021,1742718..1742846,1743822..1743951,1781842..1781995,1787059..1787420)
location: region:1649475-1787420:1
so has part: feature:1649475-1649654:1:exon
so has part: feature:1705867-1706021:1:exon
so has part: feature:1742718-1742846:1:exon
so has part: feature:1743822-1743951:1:exon
so has part: feature:1781842-1781995:1:exon
so has part: feature:1787059-1787420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649475-1649654:1:exon

position:1649654:1
position: 1649654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1705867-1706021:1:exon

position:1705867:1
position: 1705867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706021:1
position: 1706021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1742718-1742846:1:exon

position:1742718:1
position: 1742718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742846:1
position: 1742846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1743822-1743951:1:exon

position:1743822:1
position: 1743822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743951:1
position: 1743951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1781842-1781995:1:exon

position:1781842:1
position: 1781842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781995:1
position: 1781995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1787059-1787420:1:exon

position:1787059:1
position: 1787059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(q) subunit alpha
translation: MRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYDHNKAHAQLVREVDVEKVSTFENPYVNALRSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRIADSAYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: LOC125319354
subclass of: SO_0000673
so part of: LOC125319354
location: join(1649508..1649654,1705867..1706021,1742718..1742846,1743822..1743951,1781842..1781995,1787059..1787249)
location: region:1649508-1787249:1
so has part: feature:1649508-1649654:1:exon
so has part: feature:1705867-1706021:1:exon
so has part: feature:1742718-1742846:1:exon
so has part: feature:1743822-1743951:1:exon
so has part: feature:1781842-1781995:1:exon
so has part: feature:1787059-1787249:1:exon

XP_048146415.1
type: Protein
SIO_000068: ncbiprotein

position:1649508:1
position: 1649508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787249:1
position: 1787249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649508-1649654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1705867-1706021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1742718-1742846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1743822-1743951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781842-1781995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1787059-1787249:1:exon

LOC125319355
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1968159..2093216)
location: region:1968159-2093216:-1
so has part: feature:1968159-2093216:-1:exon
subclass of: SO_0000010

125319355
type: Gene
SIO_000068: ncbigene

position:1968159:-1
position: 1968159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093216:-1
position: 2093216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1968159-2093216:-1:exon

LOC125319355
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319355
product: ras GTPase-activating protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290460.1
SIO_010081: LOC125319355
subclass of: SO_0000673
so part of: LOC125319355
location: complement(join(1968159..1969025,1971839..1971973,1973301..1973378,1976606..1976694,1987457..1987524,1991561..1991647,2000279..2000394,2001132..2001274,2001450..2001609,2001758..2001930,2007473..2007549,2007834..2007991,2010468..2010545,2012690..2012777,2015063..2015219,2016167..2016287,2018658..2018736,2057606..2057756,2058610..2058662,2063027..2063058,2064093..2064210,2071433..2071503,2072340..2072475,2075974..2076123,2092580..2093216))
location: region:1968159-2093216:-1
so has part: feature:2092580-2093216:-1:exon
so has part: feature:2075974-2076123:-1:exon
so has part: feature:2072340-2072475:-1:exon
so has part: feature:2071433-2071503:-1:exon
so has part: feature:2064093-2064210:-1:exon
so has part: feature:2063027-2063058:-1:exon
so has part: feature:2058610-2058662:-1:exon
so has part: feature:2057606-2057756:-1:exon
so has part: feature:2018658-2018736:-1:exon
so has part: feature:2016167-2016287:-1:exon
so has part: feature:2015063-2015219:-1:exon
so has part: feature:2012690-2012777:-1:exon
so has part: feature:2010468-2010545:-1:exon
so has part: feature:2007834-2007991:-1:exon
so has part: feature:2007473-2007549:-1:exon
so has part: feature:2001758-2001930:-1:exon
so has part: feature:2001450-2001609:-1:exon
so has part: feature:2001132-2001274:-1:exon
so has part: feature:2000279-2000394:-1:exon
so has part: feature:1991561-1991647:-1:exon
so has part: feature:1987457-1987524:-1:exon
so has part: feature:1976606-1976694:-1:exon
so has part: feature:1973301-1973378:-1:exon
so has part: feature:1971839-1971973:-1:exon
so has part: feature:1968159-1969025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2092580-2093216:-1:exon

position:2092580:-1
position: 2092580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2075974-2076123:-1:exon

position:2075974:-1
position: 2075974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076123:-1
position: 2076123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2072340-2072475:-1:exon

position:2072340:-1
position: 2072340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2072475:-1
position: 2072475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2071433-2071503:-1:exon

position:2071433:-1
position: 2071433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2071503:-1
position: 2071503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2064093-2064210:-1:exon

position:2064093:-1
position: 2064093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064210:-1
position: 2064210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2063027-2063058:-1:exon

position:2063027:-1
position: 2063027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063058:-1
position: 2063058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2058610-2058662:-1:exon

position:2058610:-1
position: 2058610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058662:-1
position: 2058662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2057606-2057756:-1:exon

position:2057606:-1
position: 2057606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2057756:-1
position: 2057756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2018658-2018736:-1:exon

position:2018658:-1
position: 2018658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018736:-1
position: 2018736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2016167-2016287:-1:exon

position:2016167:-1
position: 2016167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2016287:-1
position: 2016287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2015063-2015219:-1:exon

position:2015063:-1
position: 2015063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2015219:-1
position: 2015219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2012690-2012777:-1:exon

position:2012690:-1
position: 2012690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012777:-1
position: 2012777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2010468-2010545:-1:exon

position:2010468:-1
position: 2010468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010545:-1
position: 2010545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2007834-2007991:-1:exon

position:2007834:-1
position: 2007834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007991:-1
position: 2007991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2007473-2007549:-1:exon

position:2007473:-1
position: 2007473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007549:-1
position: 2007549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2001758-2001930:-1:exon

position:2001758:-1
position: 2001758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001930:-1
position: 2001930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2001450-2001609:-1:exon

position:2001450:-1
position: 2001450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001609:-1
position: 2001609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2001132-2001274:-1:exon

position:2001132:-1
position: 2001132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001274:-1
position: 2001274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2000279-2000394:-1:exon

position:2000279:-1
position: 2000279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000394:-1
position: 2000394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1991561-1991647:-1:exon

position:1991561:-1
position: 1991561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991647:-1
position: 1991647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1987457-1987524:-1:exon

position:1987457:-1
position: 1987457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987524:-1
position: 1987524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1976606-1976694:-1:exon

position:1976606:-1
position: 1976606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976694:-1
position: 1976694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1973301-1973378:-1:exon

position:1973301:-1
position: 1973301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973378:-1
position: 1973378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1971839-1971973:-1:exon

position:1971839:-1
position: 1971839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971973:-1
position: 1971973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1968159-1969025:-1:exon

position:1969025:-1
position: 1969025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MMAAEAGAEDGGLVTSAGMVGAVGGAESEHYPTLCRGKELGSQGPFPVGSGGDSLGAGGPALCSALLALSSGPASLASRDALSATGQRPEVSGGVLLPPKPSTVAFPPLPPPPQPPSLAGGLGIVDEGDSLDGPEYEEEEVAIPLNAPPTNQWYHGKLDRAIAEERLWQAGKPGSYLIRESDRRPGSFVLSFLSKTSVNHFRIIAMCGDYYIGGRRFASLSDLIGYYSHVSCLLKGEKLFFPVAPPEPVEDRRRVRAILPYTKVPETDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTSENIQRFKICPTSSNQFMMGGRYYNSIAEIIEHYRKEQIVEGYYLKDPVPMQHQEQVLNDTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKSKGKRWKNLYFILEGNDAHLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRSNCFQIVVQHFSEEHYIFYFAGETQEQVQDWMKALQMFCSLRKNSPGTSNKRLRQVSSLILHVEEAHTLPVKHFTNPYCNIYLNSVQVAKTHIREGQNPVWSEEFVFDDLSSDINRFEISLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFQLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKEMHVVYALSHVCGQDRTLLAGILLKIFLHEKLESLLLRTLNDREISMEDEATTLFRATTLASTLMEQYMKATATRFVHHALKDSILKIMESKQSCELNPSKLEKNEDVNTNLAHLLSILSELVEKIFMAAEILPPTLRYIYGCLQKSVQNKWPANTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPTAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTDYSRTDLSRYLAALHEMCVAHSDELRTLSNERGVMQHVLKKLLAITELLQQKQHQYSLSNNIR
SIO_010081: LOC125319355
subclass of: SO_0000673
so part of: LOC125319355
location: complement(join(1968942..1969025,1971839..1971973,1973301..1973378,1976606..1976694,1987457..1987524,1991561..1991647,2000279..2000394,2001132..2001274,2001450..2001609,2001758..2001930,2007473..2007549,2007834..2007991,2010468..2010545,2012690..2012777,2015063..2015219,2016167..2016287,2018658..2018736,2057606..2057756,2058610..2058662,2063027..2063058,2064093..2064210,2071433..2071503,2072340..2072475,2075974..2076123,2092580..2093034))
location: region:1968942-2093034:-1
so has part: feature:2092580-2093034:-1:exon
so has part: feature:2075974-2076123:-1:exon
so has part: feature:2072340-2072475:-1:exon
so has part: feature:2071433-2071503:-1:exon
so has part: feature:2064093-2064210:-1:exon
so has part: feature:2063027-2063058:-1:exon
so has part: feature:2058610-2058662:-1:exon
so has part: feature:2057606-2057756:-1:exon
so has part: feature:2018658-2018736:-1:exon
so has part: feature:2016167-2016287:-1:exon
so has part: feature:2015063-2015219:-1:exon
so has part: feature:2012690-2012777:-1:exon
so has part: feature:2010468-2010545:-1:exon
so has part: feature:2007834-2007991:-1:exon
so has part: feature:2007473-2007549:-1:exon
so has part: feature:2001758-2001930:-1:exon
so has part: feature:2001450-2001609:-1:exon
so has part: feature:2001132-2001274:-1:exon
so has part: feature:2000279-2000394:-1:exon
so has part: feature:1991561-1991647:-1:exon
so has part: feature:1987457-1987524:-1:exon
so has part: feature:1976606-1976694:-1:exon
so has part: feature:1973301-1973378:-1:exon
so has part: feature:1971839-1971973:-1:exon
so has part: feature:1968942-1969025:-1:exon

XP_048146417.1
type: Protein
SIO_000068: ncbiprotein

position:1968942:-1
position: 1968942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093034:-1
position: 2093034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2092580-2093034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2075974-2076123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2072340-2072475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2071433-2071503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2064093-2064210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2063027-2063058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2058610-2058662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2057606-2057756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2018658-2018736:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2016167-2016287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2015063-2015219:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2012690-2012777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2010468-2010545:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2007834-2007991:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2007473-2007549:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2001758-2001930:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2001450-2001609:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001132-2001274:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2000279-2000394:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1991561-1991647:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1987457-1987524:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1976606-1976694:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1973301-1973378:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1971839-1971973:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1968942-1969025:-1:exon

LOC125319359
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2621102..2636734
location: region:2621102-2636734:1
so has part: feature:2621102-2636734:1:exon
subclass of: SO_0000011

125319359
type: Gene
SIO_000068: ncbigene

position:2621102:1
position: 2621102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2636734:1
position: 2636734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621102-2636734:1:exon

LOC125319359
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319359
product: uncharacterized LOC125319359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_007200680.1
SIO_010081: LOC125319359
subclass of: SO_0000673
so part of: LOC125319359
location: join(2621102..2621444,2621868..2621878,2636725..2636734)
location: region:2621102-2636734:1
so has part: feature:2621102-2621444:1:exon
so has part: feature:2621868-2621878:1:exon
so has part: feature:2636725-2636734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2621102-2621444:1:exon

position:2621444:1
position: 2621444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2621868-2621878:1:exon

position:2621868:1
position: 2621868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621878:1
position: 2621878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2636725-2636734:1:exon

position:2636725:1
position: 2636725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319356
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2665130..2694973
location: region:2665130-2694973:1
so has part: feature:2665130-2694973:1:exon
subclass of: SO_0000010

125319356
type: Gene
SIO_000068: ncbigene

position:2665130:1
position: 2665130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694973:1
position: 2694973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665130-2694973:1:exon

LOC125319356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319356
product: adenosine 5'-monophosphoramidase HINT1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290461.1
SIO_010081: LOC125319356
subclass of: SO_0000673
so part of: LOC125319356
location: join(2665130..2665321,2666794..2666898,2693708..2693812,2694637..2694973)
location: region:2665130-2694973:1
so has part: feature:2665130-2665321:1:exon
so has part: feature:2666794-2666898:1:exon
so has part: feature:2693708-2693812:1:exon
so has part: feature:2694637-2694973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665130-2665321:1:exon

position:2665321:1
position: 2665321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2666794-2666898:1:exon

position:2666794:1
position: 2666794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666898:1
position: 2666898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2693708-2693812:1:exon

position:2693708:1
position: 2693708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693812:1
position: 2693812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2694637-2694973:1:exon

position:2694637:1
position: 2694637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319356
product: adenosine 5'-monophosphoramidase HINT1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290462.1
SIO_010081: LOC125319356
subclass of: SO_0000673
so part of: LOC125319356
location: join(2665130..2665321,2666794..2666898,2667723..2668059)
location: region:2665130-2668059:1
so has part: feature:2665130-2665321:1:exon
so has part: feature:2666794-2666898:1:exon
so has part: feature:2667723-2668059:1:exon

position:2668059:1
position: 2668059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665130-2665321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666794-2666898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2667723-2668059:1:exon

position:2667723:1
position: 2667723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 isoform X1
translation: MGVAEGLAEWRKRGGDNGRCPWLTRVSGCGSSGLLAPLLSLERSSARRFSGTVSDESEECRAFHDLSPQAGMLFLVVPKEPIIGLSEAGNSGESCRAFHDLSPQAGMLFLVVPKEPIIGLSEAGNSGESLLGHVMIVGEKCVAHLGLTNGFRMVVDEGPEGGQSVYRIHLPILGGHQLGWPPG
SIO_010081: LOC125319356
subclass of: SO_0000673
so part of: LOC125319356
location: join(2665145..2665321,2666794..2666898,2693708..2693812,2694637..2694801)
location: region:2665145-2694801:1
so has part: feature:2665145-2665321:1:exon
so has part: feature:2666794-2666898:1:exon
so has part: feature:2693708-2693812:1:exon
so has part: feature:2694637-2694801:1:exon

XP_048146418.1
type: Protein
SIO_000068: ncbiprotein

position:2665145:1
position: 2665145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694801:1
position: 2694801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665145-2665321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666794-2666898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2693708-2693812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2694637-2694801:1:exon

LOC125319356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine 5'-monophosphoramidase HINT1-like isoform X2
translation: MGVAEGLAEWRKRGGDNGRCPWLTRVSGCGSSGLLAPLLSLERSSARRFSGTVSDESEECRAFHDLSPQAGMLFLVVPKEPIIGLSEAGNSGESLLGHVMIVGEKCVAHLGLTNGFRMVVDEGPEGGQSVYRIHLPILGGHQLGWPPG
SIO_010081: LOC125319356
subclass of: SO_0000673
so part of: LOC125319356
location: join(2665145..2665321,2666794..2666898,2667723..2667887)
location: region:2665145-2667887:1
so has part: feature:2665145-2665321:1:exon
so has part: feature:2666794-2666898:1:exon
so has part: feature:2667723-2667887:1:exon

XP_048146419.1
type: Protein
SIO_000068: ncbiprotein

position:2667887:1
position: 2667887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665145-2665321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666794-2666898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2667723-2667887:1:exon

LOC125319357
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2723443..2732154
location: region:2723443-2732154:1
so has part: feature:2723443-2732154:1:exon
subclass of: SO_0000011

125319357
type: Gene
SIO_000068: ncbigene

position:2723443:1
position: 2723443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732154:1
position: 2732154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2723443-2732154:1:exon

LOC125319357
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319357
product: uncharacterized LOC125319357, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200675.1
SIO_010081: LOC125319357
subclass of: SO_0000673
so part of: LOC125319357
location: join(2723443..2723498,2723623..2726843,2728758..2732154)
location: region:2723443-2732154:1
so has part: feature:2723443-2723498:1:exon
so has part: feature:2723623-2726843:1:exon
so has part: feature:2728758-2732154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2723443-2723498:1:exon

position:2723498:1
position: 2723498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2723623-2726843:1:exon

position:2723623:1
position: 2723623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726843:1
position: 2726843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2728758-2732154:1:exon

position:2728758:1
position: 2728758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319357
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319357
product: uncharacterized LOC125319357, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200677.1
SIO_010081: LOC125319357
subclass of: SO_0000673
so part of: LOC125319357
location: join(2723443..2723498,2723623..2726085,2726669..2726843,2728758..2732154)
location: region:2723443-2732154:1
so has part: feature:2723443-2723498:1:exon
so has part: feature:2723623-2726085:1:exon
so has part: feature:2726669-2726843:1:exon
so has part: feature:2728758-2732154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2723443-2723498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2723623-2726085:1:exon

position:2726085:1
position: 2726085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2726669-2726843:1:exon

position:2726669:1
position: 2726669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2728758-2732154:1:exon

LOC125319357
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319357
product: uncharacterized LOC125319357, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200676.1
SIO_010081: LOC125319357
subclass of: SO_0000673
so part of: LOC125319357
location: join(2723443..2723498,2723623..2723734,2725234..2726843,2728758..2732154)
location: region:2723443-2732154:1
so has part: feature:2723443-2723498:1:exon
so has part: feature:2723623-2723734:1:exon
so has part: feature:2725234-2726843:1:exon
so has part: feature:2728758-2732154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2723443-2723498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2723623-2723734:1:exon

position:2723734:1
position: 2723734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2725234-2726843:1:exon

position:2725234:1
position: 2725234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2728758-2732154:1:exon

LOC125319357
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319357
product: uncharacterized LOC125319357, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200678.1
SIO_010081: LOC125319357
subclass of: SO_0000673
so part of: LOC125319357
location: join(2723443..2723498,2723623..2723734,2725730..2726843,2728758..2732154)
location: region:2723443-2732154:1
so has part: feature:2723443-2723498:1:exon
so has part: feature:2723623-2723734:1:exon
so has part: feature:2725730-2726843:1:exon
so has part: feature:2728758-2732154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2723443-2723498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2723623-2723734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2725730-2726843:1:exon

position:2725730:1
position: 2725730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2728758-2732154:1:exon

LOC125319341
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2789883..2790820)
location: region:2789883-2790820:-1
so has part: feature:2789883-2790820:-1:exon
subclass of: SO_0000010

125319341
type: Gene
SIO_000068: ncbigene

position:2789883:-1
position: 2789883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2790820:-1
position: 2790820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789883-2790820:-1:exon

LOC125319341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319341
product: protein NYNRIN-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290446.1
SIO_010081: LOC125319341
subclass of: SO_0000673
so part of: LOC125319341
location: complement(2789883..2790820)
location: region:2789883-2790820:-1
so has part: feature:2789883-2790820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2789883-2790820:-1:exon

LOC125319341
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NYNRIN-like
translation: MTDIVQSVTSKCETCCKNNPDTSKRVVLGVTKTGDLPGDYWQIDFAEMPRKEGCRYILVLVDTFSGWPEAFPCRTNTAKEVVKALLNHIIPRFGVPLGMSTDKGPHFVATVVGEVSRILGLTWDLHTPYRLQASGKVERMNGTLKTQICKICQETSMTWVQALPIALLRVRIQPRRRDNISPYEILYGRPYQVPHIPGEIHMRGKNDLQKYLMALSSTWQKFQRFVVLSKPIGLDTPAHPFQPGDWVCIKRWASDPLQAKWKGPFQVLLTTFTAVKVAGKGPWIHYSRVKKASAPEITKKTETDTNQKDAV
SIO_010081: LOC125319341
subclass of: SO_0000673
so part of: LOC125319341
location: complement(2789885..2790820)
location: region:2789885-2790820:-1
so has part: feature:2789885-2790820:-1:exon

XP_048146403.1
type: Protein
SIO_000068: ncbiprotein

position:2789885:-1
position: 2789885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789885-2790820:-1:exon

LOC125319329
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2803095..2826113
location: region:2803095-2826113:1
so has part: feature:2803095-2826113:1:exon
subclass of: SO_0000010

125319329
type: Gene
SIO_000068: ncbigene

position:2803095:1
position: 2803095
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2826113:1
position: 2826113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803095-2826113:1:exon

LOC125319329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319329
product: uncharacterized LOC125319329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290435.1
SIO_010081: LOC125319329
subclass of: SO_0000673
so part of: LOC125319329
location: join(<2803095..2804394,2817328..2817397,2821141..2821173,2823270..2823449,2825873..2826113)
location: region:2803095-2826113:1
so has part: feature:2803095-2804394:1:exon
so has part: feature:2817328-2817397:1:exon
so has part: feature:2821141-2821173:1:exon
so has part: feature:2823270-2823449:1:exon
so has part: feature:2825873-2826113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2803095-2804394:1:exon

position:2804394:1
position: 2804394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2817328-2817397:1:exon

position:2817328:1
position: 2817328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817397:1
position: 2817397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2821141-2821173:1:exon

position:2821141:1
position: 2821141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2821173:1
position: 2821173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2823270-2823449:1:exon

position:2823270:1
position: 2823270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823449:1
position: 2823449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2825873-2826113:1:exon

position:2825873:1
position: 2825873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125319329
translation: TKESRDLQWTKEATQAFSQLKNALMSPPALGLPDMSKPFFLLSHEKQGIALGILAQDLGPYRWAVAYFSKQLDAAAKGWPGCLRAVAAVVLNIQEARKFTLGQRMTVLVSHTVSAVLEVKGGQWLSPQRFLKYQAIMVEQDDVEIVVTNIVNPASFLSGNQGEPVRHDCLETIEATYSSRPDLKDTPLDNTETWFTDGSRYIISGKRHAGYAVTTCREVIESGALPTNTSAQKAEIIALTRALEMAKGKKINIYTDSRYAFGVVHAHGAIWKERGLLNSHGKNIKHAQEIMQLLEAVQLPEKVAIMHIRAHQKVSSELEEGNELSDREAKEAAKGEVTITGALIPDGQLSLEGKPTYNKKDRKLIKDERGAFNQEGWAITAEGKLVIPSHLLWAVVKEEYQKTHWGTNALYNYLIGKIIARNFYETVVQVTQQWSKEDYPNCPGTPPSANSPFLDVRHDIFGFLPHDRQWKVAVIDIKDCFFQIPLHPDDVPRFAFSVPSINRKAPMQRYHWRVLPQGMKNSPTICQWAGSPISVMSDGEISEGDPADRASGACGAGSGKTPPAPQAEPVPPHPAHSQDSVAPRDPVPAEAGVSGEQEGAQSALPLG
SIO_010081: LOC125319329
subclass of: SO_0000673
so part of: LOC125319329
location: join(<2803095..2804394,2817328..2817397,2821141..2821173,2823270..2823449,2825873..2826113)
location: region:2803095-2826113:1
so has part: feature:2803095-2804394:1:exon
so has part: feature:2817328-2817397:1:exon
so has part: feature:2821141-2821173:1:exon
so has part: feature:2823270-2823449:1:exon
so has part: feature:2825873-2826113:1:exon

XP_048146392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2803095-2804394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2817328-2817397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2821141-2821173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2823270-2823449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2825873-2826113:1:exon

LOC125319338
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2839377..2847998
location: region:2839377-2847998:1
so has part: feature:2839377-2847998:1:exon
subclass of: SO_0000011

125319338
type: Gene
SIO_000068: ncbigene

position:2839377:1
position: 2839377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847998:1
position: 2847998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839377-2847998:1:exon

LOC125319338
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319338
product: uncharacterized LOC125319338
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007200667.1
SIO_010081: LOC125319338
subclass of: SO_0000673
so part of: LOC125319338
location: join(2839377..2839459,2845642..2846056,2847087..2847998)
location: region:2839377-2847998:1
so has part: feature:2839377-2839459:1:exon
so has part: feature:2845642-2846056:1:exon
so has part: feature:2847087-2847998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2839377-2839459:1:exon

position:2839459:1
position: 2839459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2845642-2846056:1:exon

position:2845642:1
position: 2845642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846056:1
position: 2846056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2847087-2847998:1:exon

position:2847087:1
position: 2847087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319335
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2962506..2969202
location: region:2962506-2969202:1
so has part: feature:2962506-2969202:1:exon
subclass of: SO_0000010

125319335
type: Gene
SIO_000068: ncbigene

position:2962506:1
position: 2962506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969202:1
position: 2969202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962506-2969202:1:exon

LOC125319335
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319335
product: uncharacterized LOC125319335
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048290443.1
SIO_010081: LOC125319335
subclass of: SO_0000673
so part of: LOC125319335
location: join(2962506..2965311,2967259..2969202)
location: region:2962506-2969202:1
so has part: feature:2962506-2965311:1:exon
so has part: feature:2967259-2969202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2962506-2965311:1:exon

position:2965311:1
position: 2965311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2967259-2969202:1:exon

position:2967259:1
position: 2967259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125319335
translation: MADLLAEQLTVMREVSQQLAALLEMLLRVTVAGPVPAAAPAAAPARTVALLRVATSLPSTQPSTASAATPSAGPAPIPCQLSSSALEPSEILLPDEANSNTEETPAPQQETVVVARRRQSVSRLPQNCPWTLPECKVTVRPKNSRRFWEAVRLRALEAGDWDLIEKVGMPEDAEGPVQVATVPREGVMVDQDDSEPSQGVIQAFPVQKALPNMGQPYKREVIARRVIQYLQSKVAQYGLGSPEVMQVIRVLNTDLLSPFDIKHLGQVIFQPVQFTVFESNWRRMAEKAAAQNVQLPPTDPRHGVRVDALMGANFFSNPDLQATWHPQVLEQAQRIGMGALLKSIDMAAPKTRYVKISQGQKEQFLSFVEKIAAALEKQVEDETLRQMLCKQLARDNANNECRKIIDALPRDPTLTEMVEACSKVGSGDYKSALAAVLQPIQVNSDREQRKPKVESKQKQARQKQKENKGSSHCERCDRPGHYAKYCESMYHANSQLLTSLGNMNRSVRGNCAQTQILPQGMAQTQAYSASLEAAPKDQPGWMCTPQQQSS
SIO_010081: LOC125319335
subclass of: SO_0000673
so part of: LOC125319335
location: 2962520..2964172
location: region:2962520-2964172:1
so has part: feature:2962520-2964172:1:exon

XP_048146400.1
type: Protein
SIO_000068: ncbiprotein

position:2962520:1
position: 2962520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2964172:1
position: 2964172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962520-2964172:1:exon

LOC125319336
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2983841..3063592
location: region:2983841-3063592:1
so has part: feature:2983841-3063592:1:exon
subclass of: SO_0000010

125319336
type: Gene
SIO_000068: ncbigene

position:2983841:1
position: 2983841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3063592:1
position: 3063592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2983841-3063592:1:exon

LOC125319336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319336
product: adenosine 5'-monophosphoramidase HINT2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290444.1
SIO_010081: LOC125319336
subclass of: SO_0000673
so part of: LOC125319336
location: join(2983841..2984028,2985487..2985591,3012490..3012594,3062353..3062457,3063253..3063592)
location: region:2983841-3063592:1
so has part: feature:2983841-2984028:1:exon
so has part: feature:2985487-2985591:1:exon
so has part: feature:3012490-3012594:1:exon
so has part: feature:3062353-3062457:1:exon
so has part: feature:3063253-3063592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2983841-2984028:1:exon

position:2984028:1
position: 2984028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2985487-2985591:1:exon

position:2985487:1
position: 2985487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985591:1
position: 2985591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3012490-3012594:1:exon

position:3012490:1
position: 3012490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012594:1
position: 3012594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3062353-3062457:1:exon

position:3062353:1
position: 3062353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3062457:1
position: 3062457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3063253-3063592:1:exon

position:3063253:1
position: 3063253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319336
product: adenosine 5'-monophosphoramidase HINT2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290445.1
SIO_010081: LOC125319336
subclass of: SO_0000673
so part of: LOC125319336
location: join(2983842..2984028,2985487..2985591,3012490..3012594,3013397..3013736)
location: region:2983842-3013736:1
so has part: feature:2983842-2984028:1:exon
so has part: feature:2985487-2985591:1:exon
so has part: feature:3012490-3012594:1:exon
so has part: feature:3013397-3013736:1:exon

position:2983842:1
position: 2983842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3013736:1
position: 3013736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2983842-2984028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2985487-2985591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3012490-3012594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3013397-3013736:1:exon

position:3013397:1
position: 3013397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125319336 isoform X1
translation: MGAAEGLAQWRKCWGHGRLCSWLRRLAGCGPRGMVALLLSSERSSARRFSGTISDEDEECRAFRGLSLQSGTLFLVMPKEPIIGLSEAEGSGESCRAFRGLSLQSGTLFLVMPKEPIIGLSEAEGSGESCRAFRGLSLQSGTLFLVMPKEPIIGLSEAEGSGESLLGHVMIVGEMCVAHLGLTNGFRMVVDEGPEGGQSVYRIHLPILGGRQLDWPAG
SIO_010081: LOC125319336
subclass of: SO_0000673
so part of: LOC125319336
location: join(2983852..2984028,2985487..2985591,3012490..3012594,3062353..3062457,3063253..3063417)
location: region:2983852-3063417:1
so has part: feature:2983852-2984028:1:exon
so has part: feature:2985487-2985591:1:exon
so has part: feature:3012490-3012594:1:exon
so has part: feature:3062353-3062457:1:exon
so has part: feature:3063253-3063417:1:exon

XP_048146401.1
type: Protein
SIO_000068: ncbiprotein

position:2983852:1
position: 2983852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3063417:1
position: 3063417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2983852-2984028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2985487-2985591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3012490-3012594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3062353-3062457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3063253-3063417:1:exon

LOC125319336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine 5'-monophosphoramidase HINT2-like isoform X2
translation: MGAAEGLAQWRKCWGHGRLCSWLRRLAGCGPRGMVALLLSSERSSARRFSGTISDEDEECRAFRGLSLQSGTLFLVMPKEPIIGLSEAEGSGESCRAFRGLSLQSGTLFLVMPKEPIIGLSEAEGSGESLLGHVMIVGEMCVAHLGLTNGFRMVVDEGPEGGQSVYRIHLPVLGGRQLGWTPG
SIO_010081: LOC125319336
subclass of: SO_0000673
so part of: LOC125319336
location: join(2983852..2984028,2985487..2985591,3012490..3012594,3013397..3013561)
location: region:2983852-3013561:1
so has part: feature:2983852-2984028:1:exon
so has part: feature:2985487-2985591:1:exon
so has part: feature:3012490-3012594:1:exon
so has part: feature:3013397-3013561:1:exon

XP_048146402.1
type: Protein
SIO_000068: ncbiprotein

position:3013561:1
position: 3013561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2983852-2984028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2985487-2985591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3012490-3012594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3013397-3013561:1:exon

LOC125319339
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3024485..3025551
location: region:3024485-3025551:1
so has part: feature:3024485-3025551:1:exon
subclass of: SO_0000011

125319339
type: Gene
SIO_000068: ncbigene

position:3024485:1
position: 3024485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3025551:1
position: 3025551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024485-3025551:1:exon

LOC125319339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319339
product: uncharacterized LOC125319339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007200668.1
SIO_010081: LOC125319339
subclass of: SO_0000673
so part of: LOC125319339
location: join(3024485..3024697,3024808..3024909,3025330..3025551)
location: region:3024485-3025551:1
so has part: feature:3024485-3024697:1:exon
so has part: feature:3024808-3024909:1:exon
so has part: feature:3025330-3025551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3024485-3024697:1:exon

position:3024697:1
position: 3024697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3024808-3024909:1:exon

position:3024808:1
position: 3024808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024909:1
position: 3024909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3025330-3025551:1:exon

position:3025330:1
position: 3025330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319311
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3120434..3122664)
location: region:3120434-3122664:-1
so has part: feature:3120434-3122664:-1:exon
subclass of: SO_0000010

125319311
type: Gene
SIO_000068: ncbigene

position:3120434:-1
position: 3120434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122664:-1
position: 3122664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3120434-3122664:-1:exon

LOC125319311
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319311
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048290422.1
SIO_010081: LOC125319311
subclass of: SO_0000673
so part of: LOC125319311
location: complement(join(3120434..3121661,3121746..3122664))
location: region:3120434-3122664:-1
so has part: feature:3121746-3122664:-1:exon
so has part: feature:3120434-3121661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3121746-3122664:-1:exon

position:3121746:-1
position: 3121746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3120434-3121661:-1:exon

position:3121661:-1
position: 3121661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319311
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MKAALPSAQTRRSKDPLHSPPAQPYLQRERSGRSHSGAGWWRNHGGLPLKRSPKRRGRDPHPMPRRMAPTPEGMGGAHTRPAEAGEVRREIHTRPAGAGEVRRETHAASGSGGGAPGNADAAGGSGGGAPGNTDAAGGIKEGPPDTADARERKRGGNPGGGTRANQSARPETCPYIARASLSRRRGEPRGKERPNPKRRGRGRSPVKKLRSPEVSSQSTSGSESDYSWSEWPDEWSVTDSDQDYLRIDKCYNHRAPTWAKGKFEKERTPLTDWRKIKTACAEWAPSATLAFPVRVGGQGGNQRALHLMFLLATQQHKIHTSAGGTPPAEESL
SIO_010081: LOC125319311
subclass of: SO_0000673
so part of: LOC125319311
location: complement(join(3121045..3121661,3121746..3122127))
location: region:3121045-3122127:-1
so has part: feature:3121746-3122127:-1:exon
so has part: feature:3121045-3121661:-1:exon

XP_048146379.1
type: Protein
SIO_000068: ncbiprotein

position:3121045:-1
position: 3121045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122127:-1
position: 3122127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3121746-3122127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3121045-3121661:-1:exon

LOC125319358
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3177344..3233540
location: region:3177344-3233540:1
so has part: feature:3177344-3233540:1:exon
subclass of: SO_0000011

125319358
type: Gene
SIO_000068: ncbigene

position:3177344:1
position: 3177344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233540:1
position: 3233540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3177344-3233540:1:exon

LOC125319358
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319358
product: uncharacterized LOC125319358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007200679.1
SIO_010081: LOC125319358
subclass of: SO_0000673
so part of: LOC125319358
location: join(3177344..3177513,3178749..3178853,3232378..3233540)
location: region:3177344-3233540:1
so has part: feature:3177344-3177513:1:exon
so has part: feature:3178749-3178853:1:exon
so has part: feature:3232378-3233540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3177344-3177513:1:exon

position:3177513:1
position: 3177513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3178749-3178853:1:exon

position:3178749:1
position: 3178749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178853:1
position: 3178853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3232378-3233540:1:exon

position:3232378:1
position: 3232378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319312
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319312
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3265095..3267632
location: region:3265095-3267632:1
so has part: feature:3265095-3267632:1:exon
subclass of: SO_0000011

125319312
type: Gene
SIO_000068: ncbigene

position:3265095:1
position: 3265095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3267632:1
position: 3267632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3265095-3267632:1:exon

LOC125319312
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319312
product: uncharacterized LOC125319312
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007200660.1
SIO_010081: LOC125319312
subclass of: SO_0000673
so part of: LOC125319312
location: join(3265095..3265393,3266500..3266567,3267300..3267632)
location: region:3265095-3267632:1
so has part: feature:3265095-3265393:1:exon
so has part: feature:3266500-3266567:1:exon
so has part: feature:3267300-3267632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3265095-3265393:1:exon

position:3265393:1
position: 3265393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3266500-3266567:1:exon

position:3266500:1
position: 3266500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3266567:1
position: 3266567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3267300-3267632:1:exon

position:3267300:1
position: 3267300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319334
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4191076..4559317)
location: region:4191076-4559317:-1
so has part: feature:4191076-4559317:-1:exon
subclass of: SO_0000010

125319334
type: Gene
SIO_000068: ncbigene

position:4191076:-1
position: 4191076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4559317:-1
position: 4559317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191076-4559317:-1:exon

LOC125319334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319334
product: homer protein homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290442.1
SIO_010081: LOC125319334
subclass of: SO_0000673
so part of: LOC125319334
location: complement(join(4191076..4191265,4213493..4213573,4215270..4215380,4327872..4328028,4391395..4391537,4400371..4400463,4409966..4410097,4478986..4479142,4559122..4559317))
location: region:4191076-4559317:-1
so has part: feature:4559122-4559317:-1:exon
so has part: feature:4478986-4479142:-1:exon
so has part: feature:4409966-4410097:-1:exon
so has part: feature:4400371-4400463:-1:exon
so has part: feature:4391395-4391537:-1:exon
so has part: feature:4327872-4328028:-1:exon
so has part: feature:4215270-4215380:-1:exon
so has part: feature:4213493-4213573:-1:exon
so has part: feature:4191076-4191265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4559122-4559317:-1:exon

position:4559122:-1
position: 4559122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4478986-4479142:-1:exon

position:4478986:-1
position: 4478986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479142:-1
position: 4479142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4409966-4410097:-1:exon

position:4409966:-1
position: 4409966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410097:-1
position: 4410097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4400371-4400463:-1:exon

position:4400371:-1
position: 4400371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4400463:-1
position: 4400463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4391395-4391537:-1:exon

position:4391395:-1
position: 4391395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4391537:-1
position: 4391537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4327872-4328028:-1:exon

position:4327872:-1
position: 4327872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328028:-1
position: 4328028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4215270-4215380:-1:exon

position:4215270:-1
position: 4215270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4215380:-1
position: 4215380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4213493-4213573:-1:exon

position:4213493:-1
position: 4213493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4213573:-1
position: 4213573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4191076-4191265:-1:exon

position:4191265:-1
position: 4191265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 1-like
translation: MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKDAAQLAKEKSQEKMELTSTPSQESAGGDIQSPLTPESINGTDDERVMAEVTQNSEPRAEPTQNALPFTHSLTISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECVSSQANEVHTHKTELNQTIQELESTLKKKEEETERLKQEINSAREFQAQRNSLTQKLQEVEIRNKDLEDQLSDLEQRLEKSQNEQETFRNNLKTLLEILDGKIFELTELRDNLAKLTECS
SIO_010081: LOC125319334
subclass of: SO_0000673
so part of: LOC125319334
location: complement(join(4191077..4191265,4213493..4213573,4215270..4215380,4327872..4328028,4391395..4391537,4400371..4400463,4409966..4410097,4478986..4479142,4559122..4559126))
location: region:4191077-4559126:-1
so has part: feature:4559122-4559126:-1:exon
so has part: feature:4478986-4479142:-1:exon
so has part: feature:4409966-4410097:-1:exon
so has part: feature:4400371-4400463:-1:exon
so has part: feature:4391395-4391537:-1:exon
so has part: feature:4327872-4328028:-1:exon
so has part: feature:4215270-4215380:-1:exon
so has part: feature:4213493-4213573:-1:exon
so has part: feature:4191077-4191265:-1:exon

XP_048146399.1
type: Protein
SIO_000068: ncbiprotein

position:4191077:-1
position: 4191077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4559126:-1
position: 4559126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4559122-4559126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478986-4479142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4409966-4410097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400371-4400463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4391395-4391537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4327872-4328028:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4215270-4215380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4213493-4213573:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4191077-4191265:-1:exon

LOC125319331
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4692857..5209759
location: region:4692857-5209759:1
so has part: feature:4692857-5209759:1:exon
subclass of: SO_0000010

125319331
type: Gene
SIO_000068: ncbigene

position:4692857:1
position: 4692857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5209759:1
position: 5209759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692857-5209759:1:exon

LOC125319331
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319331
product: CBP80/20-dependent translation initiation factor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290438.1
SIO_010081: LOC125319331
subclass of: SO_0000673
so part of: LOC125319331
location: join(4692857..4692865,4698363..4698575,4700988..4701071,4799006..4799079,4799991..4800095,4825154..4825229,4913605..4913681,5048351..5048792,5050697..5051026,5139779..5139934,5207158..5207211,5209000..5209759)
location: region:4692857-5209759:1
so has part: feature:4692857-4692865:1:exon
so has part: feature:4698363-4698575:1:exon
so has part: feature:4700988-4701071:1:exon
so has part: feature:4799006-4799079:1:exon
so has part: feature:4799991-4800095:1:exon
so has part: feature:4825154-4825229:1:exon
so has part: feature:4913605-4913681:1:exon
so has part: feature:5048351-5048792:1:exon
so has part: feature:5050697-5051026:1:exon
so has part: feature:5139779-5139934:1:exon
so has part: feature:5207158-5207211:1:exon
so has part: feature:5209000-5209759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4692857-4692865:1:exon

position:4692865:1
position: 4692865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4698363-4698575:1:exon

position:4698363:1
position: 4698363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4698575:1
position: 4698575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4700988-4701071:1:exon

position:4700988:1
position: 4700988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4701071:1
position: 4701071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4799006-4799079:1:exon

position:4799006:1
position: 4799006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4799079:1
position: 4799079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4799991-4800095:1:exon

position:4799991:1
position: 4799991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4800095:1
position: 4800095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4825154-4825229:1:exon

position:4825154:1
position: 4825154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4825229:1
position: 4825229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4913605-4913681:1:exon

position:4913605:1
position: 4913605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4913681:1
position: 4913681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5048351-5048792:1:exon

position:5048351:1
position: 5048351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5048792:1
position: 5048792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5050697-5051026:1:exon

position:5050697:1
position: 5050697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5051026:1
position: 5051026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5139779-5139934:1:exon

position:5139779:1
position: 5139779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5139934:1
position: 5139934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5207158-5207211:1:exon

position:5207158:1
position: 5207158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5207211:1
position: 5207211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5209000-5209759:1:exon

position:5209000:1
position: 5209000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319331
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CBP80/20-dependent translation initiation factor-like
translation: MLKAPSVLDISPEGMENSSVASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLMDKMEGDGESEKTQSHILQWTADSSEQLDGSCPLSQGKVSSSHEHSQNGNKESSLDMLGTDIWAANTFDSFSGATWDLQPEKLDFTQFHKKLQTTSKHLLPHIDREGLGKGKFEDGDSINLNDIEKVLPVWQGYHSLPHEAEIAHTKKLFRRRRNDRRRQQRLPGGNKSQQHADHQQGGTKHNRDHQKLYQGGQAPHSSGRTGHHGYSQNRRWHHNQKHLPNDKETHRNTKETENLKIEDTSICAVHIPLEMHRGLEAMEKQSQQYIQESETKQKDSIHERIGERPKISLLQSSKDRLQRRLKEKMPCLSLSTDQDKVMVETTNPEKNKMDKLIEILNSMRNNSSDVDSKLTTFMEEAQNSTNSEEMLGEIVKTIYQKAVTDRSFASTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTMREELQQRDVEHWLGFITFLCEVFGTMRSSTGEPFQVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLAIARDKMLCPSESMLTRSLLLEVIELHANNWNPLMPTITQYYNKTIQKLTA
SIO_010081: LOC125319331
subclass of: SO_0000673
so part of: LOC125319331
location: join(4692857..4692865,4698363..4698575,4700988..4701071,4799006..4799079,4799991..4800095,4825154..4825229,4913605..4913681,5048351..5048792,5050697..5051026,5139779..5139934,5207158..5207211,5209000..5209215)
location: region:4692857-5209215:1
so has part: feature:4692857-4692865:1:exon
so has part: feature:4698363-4698575:1:exon
so has part: feature:4700988-4701071:1:exon
so has part: feature:4799006-4799079:1:exon
so has part: feature:4799991-4800095:1:exon
so has part: feature:4825154-4825229:1:exon
so has part: feature:4913605-4913681:1:exon
so has part: feature:5048351-5048792:1:exon
so has part: feature:5050697-5051026:1:exon
so has part: feature:5139779-5139934:1:exon
so has part: feature:5207158-5207211:1:exon
so has part: feature:5209000-5209215:1:exon

XP_048146395.1
type: Protein
SIO_000068: ncbiprotein

position:5209215:1
position: 5209215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692857-4692865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4698363-4698575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4700988-4701071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4799006-4799079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4799991-4800095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4825154-4825229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4913605-4913681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5048351-5048792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5050697-5051026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5139779-5139934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5207158-5207211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5209000-5209215:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4714255..4714340
location: region:4714255-4714340:1
so has part: feature:4714255-4714340:1:exon
subclass of: SO_0000663

125319364
type: Gene
SIO_000068: ncbigene

position:4714255:1
position: 4714255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4714340:1
position: 4714340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4714255-4714340:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4714293..4714295,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 4714255..4714340
location: region:4714255-4714340:1
so has part: feature:4714255-4714340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4714255-4714340:1:exon

LOC125319352
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319352
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4727232..4750540
location: region:4727232-4750540:1
so has part: feature:4727232-4750540:1:exon
subclass of: SO_0000011

125319352
type: Gene
SIO_000068: ncbigene

position:4727232:1
position: 4727232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4750540:1
position: 4750540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4727232-4750540:1:exon

LOC125319352
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319352
product: uncharacterized LOC125319352
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200674.1
SIO_010081: LOC125319352
subclass of: SO_0000673
so part of: LOC125319352
location: join(4727232..4727306,4733772..4733775,4738415..4738422,4750530..4750540)
location: region:4727232-4750540:1
so has part: feature:4727232-4727306:1:exon
so has part: feature:4733772-4733775:1:exon
so has part: feature:4738415-4738422:1:exon
so has part: feature:4750530-4750540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4727232-4727306:1:exon

position:4727306:1
position: 4727306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4733772-4733775:1:exon

position:4733772:1
position: 4733772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4733775:1
position: 4733775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4738415-4738422:1:exon

position:4738415:1
position: 4738415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4738422:1
position: 4738422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4750530-4750540:1:exon

position:4750530:1
position: 4750530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319342
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4970281..4979787)
location: region:4970281-4979787:-1
so has part: feature:4970281-4979787:-1:exon
subclass of: SO_0000010

125319342
type: Gene
SIO_000068: ncbigene

position:4970281:-1
position: 4970281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4979787:-1
position: 4979787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4970281-4979787:-1:exon

LOC125319342
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319342
product: endogenous retrovirus group 3 member 1 Env polyprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048290447.1
SIO_010081: LOC125319342
subclass of: SO_0000673
so part of: LOC125319342
location: complement(join(4970281..4970599,4970928..4972812,4979653..4979787))
location: region:4970281-4979787:-1
so has part: feature:4979653-4979787:-1:exon
so has part: feature:4970928-4972812:-1:exon
so has part: feature:4970281-4970599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4979653-4979787:-1:exon

position:4979653:-1
position: 4979653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4970928-4972812:-1:exon

position:4970928:-1
position: 4970928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4972812:-1
position: 4972812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4970281-4970599:-1:exon

position:4970599:-1
position: 4970599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319342
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endogenous retrovirus group 3 member 1 Env polyprotein-like
translation: MITLIYDKANPKITMSFQKPEITEEEPSEGEKPKERTKEAKMTSPTSRGNPNTNNCSRVCLKGKVSNILLLNVICLWVLWPPFTQAADSRCNKCYKTVYQAEGSSFQIRHFFRAHTYVNPSCYNITELGICSEKGHKYWIGKNIGTQTHKQKGECPSQDNWLCFNFRYITRTEDLLKRKTYDTDLIQEVVIEEKEKQKENNPLMSRKNLFIDLAERIGKQLNLTNCWVCGGTLESESWPWRGVSLGPPDLLRLSNLSPTTRHDNETWLLSNSVIGEECIWRKGRKFLEEVGETICKRYLVTDGQKHWWIPQEPDVFWSAEKIKNKNCILNPVKKLWQCWDQGNPFSVLPQISKYWITAASIQSHFWEAPQDLYWICGNRAYSSLPPRWKGSCTLGAIQPNFFLLAENAGAHLGISLYDELSRTKRHVIGGTQRWEEEEWPAERILETYGPATWAQDGSWGYRTPIYMLNRIIRLQALIEDLFFSLV
SIO_010081: LOC125319342
subclass of: SO_0000673
so part of: LOC125319342
location: complement(join(4970576..4970599,4970928..4972364))
location: region:4970576-4972364:-1
so has part: feature:4970928-4972364:-1:exon
so has part: feature:4970576-4970599:-1:exon

XP_048146404.1
type: Protein
SIO_000068: ncbiprotein

position:4970576:-1
position: 4970576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4972364:-1
position: 4972364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4970928-4972364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4970576-4970599:-1:exon

LOC125319349
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5071918..5088578
location: region:5071918-5088578:1
so has part: feature:5071918-5088578:1:exon
subclass of: SO_0000011

125319349
type: Gene
SIO_000068: ncbigene

position:5071918:1
position: 5071918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5088578:1
position: 5088578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5071918-5088578:1:exon

LOC125319349
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319349
product: uncharacterized LOC125319349
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_007200671.1
SIO_010081: LOC125319349
subclass of: SO_0000673
so part of: LOC125319349
location: join(5071918..5071962,5080893..5080895,5088443..5088578)
location: region:5071918-5088578:1
so has part: feature:5071918-5071962:1:exon
so has part: feature:5080893-5080895:1:exon
so has part: feature:5088443-5088578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5071918-5071962:1:exon

position:5071962:1
position: 5071962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5080893-5080895:1:exon

position:5080893:1
position: 5080893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5080895:1
position: 5080895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5088443-5088578:1:exon

position:5088443:1
position: 5088443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319343
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5333042..5385337)
location: region:5333042-5385337:-1
so has part: feature:5333042-5385337:-1:exon
subclass of: SO_0000010

125319343
type: Gene
SIO_000068: ncbigene

position:5333042:-1
position: 5333042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5385337:-1
position: 5385337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5333042-5385337:-1:exon

LOC125319343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319343
product: mothers against decapentaplegic homolog 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290448.1
SIO_010081: LOC125319343
subclass of: SO_0000673
so part of: LOC125319343
location: complement(join(5333042..5333580,5376488..5376559,5381115..5381117,5384161..5384214,5384767..5385337))
location: region:5333042-5385337:-1
so has part: feature:5384767-5385337:-1:exon
so has part: feature:5384161-5384214:-1:exon
so has part: feature:5381115-5381117:-1:exon
so has part: feature:5376488-5376559:-1:exon
so has part: feature:5333042-5333580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5384767-5385337:-1:exon

position:5384767:-1
position: 5384767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5384161-5384214:-1:exon

position:5384161:-1
position: 5384161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5384214:-1
position: 5384214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5381115-5381117:-1:exon

position:5381115:-1
position: 5381115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5381117:-1
position: 5381117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5376488-5376559:-1:exon

position:5376488:-1
position: 5376488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5376559:-1
position: 5376559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5333042-5333580:-1:exon

position:5333580:-1
position: 5333580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 7-like
translation: MFRTKRSVLVRRLWRSRAPGGEEEEEAAAAAGESGTAVAVAEVRASACGGGRECCPGKAGRGGRAAAGAEAELKALTHAVLKRLKERQLEGLLHAVESRGGARTPCLLLPAKADSRLGQHWYPLPVLLCKVFRWPDLRHCSEVKRLCCCESYSKAHPELVCCNPHHLSRLCELESPPPPYSRYTMDFLKPTADFPDSVPSSTETGRTNCLAPGGLSDFQVLQQPGDWSNWCVVAYWEEKTRVGRLYSVQEPSLDIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGYGIQLSKEVDGVWVYNRSSYPIFIKSATLDSPDSRMLLVHKVFPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNNQ
SIO_010081: LOC125319343
subclass of: SO_0000673
so part of: LOC125319343
location: complement(join(5333042..5333580,5376488..5376559,5381115..5381117,5384161..5384214,5384767..5385286))
location: region:5333042-5385286:-1
so has part: feature:5384767-5385286:-1:exon
so has part: feature:5384161-5384214:-1:exon
so has part: feature:5381115-5381117:-1:exon
so has part: feature:5376488-5376559:-1:exon
so has part: feature:5333042-5333580:-1:exon

XP_048146405.1
type: Protein
SIO_000068: ncbiprotein

position:5385286:-1
position: 5385286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5384767-5385286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5384161-5384214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5381115-5381117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376488-5376559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5333042-5333580:-1:exon

LOC125319350
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5420535..5425378
location: region:5420535-5425378:1
so has part: feature:5420535-5425378:1:exon
subclass of: SO_0000011

125319350
type: Gene
SIO_000068: ncbigene

position:5420535:1
position: 5420535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5425378:1
position: 5425378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420535-5425378:1:exon

LOC125319350
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319350
product: uncharacterized LOC125319350
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_007200672.1
SIO_010081: LOC125319350
subclass of: SO_0000673
so part of: LOC125319350
location: join(5420535..5421011,5421233..5421234,5425353..5425378)
location: region:5420535-5425378:1
so has part: feature:5420535-5421011:1:exon
so has part: feature:5421233-5421234:1:exon
so has part: feature:5425353-5425378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5420535-5421011:1:exon

position:5421011:1
position: 5421011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5421233-5421234:1:exon

position:5421233:1
position: 5421233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5421234:1
position: 5421234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5425353-5425378:1:exon

position:5425353:1
position: 5425353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319332
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5450894..5453041)
location: region:5450894-5453041:-1
so has part: feature:5450894-5453041:-1:exon

125319332
type: Gene
SIO_000068: ncbigene

position:5450894:-1
position: 5450894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5453041:-1
position: 5453041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5450894-5453041:-1:exon

LOC125319332
type: Exon
subclass of: SO_0000147
RO_0002162: 134902
gene: LOC125319332
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC125319332
subclass of: SO_0000673
so part of: LOC125319332
location: complement(5450894..5453041)
location: region:5450894-5453041:-1
so has part: feature:5450894-5453041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5450894-5453041:-1:exon

LOC125319347
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5623956..5629366)
location: region:5623956-5629366:-1
so has part: feature:5623956-5629366:-1:exon
subclass of: SO_0000010

125319347
type: Gene
SIO_000068: ncbigene

position:5623956:-1
position: 5623956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5629366:-1
position: 5629366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5623956-5629366:-1:exon

LOC125319347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319347
product: UPF0729 protein C18orf32-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290454.1
SIO_010081: LOC125319347
subclass of: SO_0000673
so part of: LOC125319347
location: complement(join(5623956..5625976,5626633..5626885,5629294..5629366))
location: region:5623956-5629366:-1
so has part: feature:5629294-5629366:-1:exon
so has part: feature:5626633-5626885:-1:exon
so has part: feature:5623956-5625976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5629294-5629366:-1:exon

position:5629294:-1
position: 5629294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5626633-5626885:-1:exon

position:5626633:-1
position: 5626633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5626885:-1
position: 5626885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5623956-5625976:-1:exon

position:5625976:-1
position: 5625976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0729 protein C18orf32-like
translation: MVCIPCIVIPVLLWVYKKFLEPYIYPIIAPFIKHVWPKKAAQEMTATKQGREGSGGNPQAPSATKRDQEDECGIYKFESNGVAIGIATKRSTEVCDKKMD
SIO_010081: LOC125319347
subclass of: SO_0000673
so part of: LOC125319347
location: complement(join(5625902..5625976,5626633..5626860))
location: region:5625902-5626860:-1
so has part: feature:5626633-5626860:-1:exon
so has part: feature:5625902-5625976:-1:exon

XP_048146411.1
type: Protein
SIO_000068: ncbiprotein

position:5625902:-1
position: 5625902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5626860:-1
position: 5626860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5626633-5626860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5625902-5625976:-1:exon

LOC125319346
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5629729..5633540)
location: region:5629729-5633540:-1
so has part: feature:5629729-5633540:-1:exon
subclass of: SO_0000010

125319346
type: Gene
SIO_000068: ncbigene

position:5629729:-1
position: 5629729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633540:-1
position: 5633540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5629729-5633540:-1:exon

LOC125319346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319346
product: 60S ribosomal protein L17-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290451.1
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629729..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633097,5633495..5633540))
location: region:5629729-5633540:-1
so has part: feature:5633495-5633540:-1:exon
so has part: feature:5633045-5633097:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629729-5629818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5633495-5633540:-1:exon

position:5633495:-1
position: 5633495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5633045-5633097:-1:exon

position:5633045:-1
position: 5633045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633097:-1
position: 5633097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5632912-5632952:-1:exon

position:5632912:-1
position: 5632912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5632952:-1
position: 5632952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5631639-5631773:-1:exon

position:5631639:-1
position: 5631639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5631773:-1
position: 5631773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5631137-5631235:-1:exon

position:5631137:-1
position: 5631137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5631235:-1
position: 5631235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5630313-5630504:-1:exon

position:5630313:-1
position: 5630313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5630504:-1
position: 5630504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5629729-5629818:-1:exon

position:5629818:-1
position: 5629818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319346
product: 60S ribosomal protein L17-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290453.1
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629729..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633097,5633403..5633425))
location: region:5629729-5633425:-1
so has part: feature:5633403-5633425:-1:exon
so has part: feature:5633045-5633097:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629729-5629818:-1:exon

position:5633425:-1
position: 5633425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633403-5633425:-1:exon

position:5633403:-1
position: 5633403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5633045-5633097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5632912-5632952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5631639-5631773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5631137-5631235:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5630313-5630504:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5629729-5629818:-1:exon

LOC125319346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319346
product: 60S ribosomal protein L17-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290452.1
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629729..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633097,5633371..5633394))
location: region:5629729-5633394:-1
so has part: feature:5633371-5633394:-1:exon
so has part: feature:5633045-5633097:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629729-5629818:-1:exon

position:5633394:-1
position: 5633394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633371-5633394:-1:exon

position:5633371:-1
position: 5633371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5633045-5633097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5632912-5632952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5631639-5631773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5631137-5631235:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5630313-5630504:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5629729-5629818:-1:exon

LOC125319346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L17-like
translation: MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPRKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARD
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629771..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633084))
location: region:5629771-5633084:-1
so has part: feature:5633045-5633084:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629771-5629818:-1:exon

XP_048146408.1
type: Protein
SIO_000068: ncbiprotein

position:5629771:-1
position: 5629771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633084:-1
position: 5633084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633045-5633084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5632912-5632952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5631639-5631773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5631137-5631235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630313-5630504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5629771-5629818:-1:exon

LOC125319346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L17-like
translation: MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPRKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARD
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629771..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633084))
location: region:5629771-5633084:-1
so has part: feature:5633045-5633084:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629771-5629818:-1:exon

XP_048146409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5633045-5633084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5632912-5632952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5631639-5631773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5631137-5631235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630313-5630504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5629771-5629818:-1:exon

LOC125319346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L17-like
translation: MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPRKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARD
SIO_010081: LOC125319346
subclass of: SO_0000673
so part of: LOC125319346
location: complement(join(5629771..5629818,5630313..5630504,5631137..5631235,5631639..5631773,5632912..5632952,5633045..5633084))
location: region:5629771-5633084:-1
so has part: feature:5633045-5633084:-1:exon
so has part: feature:5632912-5632952:-1:exon
so has part: feature:5631639-5631773:-1:exon
so has part: feature:5631137-5631235:-1:exon
so has part: feature:5630313-5630504:-1:exon
so has part: feature:5629771-5629818:-1:exon

XP_048146410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5633045-5633084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5632912-5632952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5631639-5631773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5631137-5631235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5630313-5630504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5629771-5629818:-1:exon

LOC125319361
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319361
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5630156..5630227)
location: region:5630156-5630227:-1
so has part: feature:5630156-5630227:-1:exon
subclass of: SO_0000578

125319361
type: Gene
SIO_000068: ncbigene

position:5630156:-1
position: 5630156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5630227:-1
position: 5630227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5630156-5630227:-1:exon

LOC125319361
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: snoRNA
gene: LOC125319361
product: small nucleolar RNA SNORD58
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00151
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007200681.1
SIO_010081: LOC125319361
subclass of: SO_0000673
so part of: LOC125319361
location: complement(5630156..5630227)
location: region:5630156-5630227:-1
so has part: feature:5630156-5630227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5630156-5630227:-1:exon

LOC125319362
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319362
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5630724..5630793)
location: region:5630724-5630793:-1
so has part: feature:5630724-5630793:-1:exon
subclass of: SO_0000578

125319362
type: Gene
SIO_000068: ncbigene

position:5630724:-1
position: 5630724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5630793:-1
position: 5630793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5630724-5630793:-1:exon

LOC125319362
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: snoRNA
gene: LOC125319362
product: small nucleolar RNA SNORD58
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00151
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007200682.1
SIO_010081: LOC125319362
subclass of: SO_0000673
so part of: LOC125319362
location: complement(5630724..5630793)
location: region:5630724-5630793:-1
so has part: feature:5630724-5630793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5630724-5630793:-1:exon

LOC125319363
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319363
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5633195..5633263)
location: region:5633195-5633263:-1
so has part: feature:5633195-5633263:-1:exon
subclass of: SO_0000578

125319363
type: Gene
SIO_000068: ncbigene

position:5633195:-1
position: 5633195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5633263:-1
position: 5633263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633195-5633263:-1:exon

LOC125319363
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: snoRNA
gene: LOC125319363
product: small nucleolar RNA SNORD58
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00151
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007200683.1
SIO_010081: LOC125319363
subclass of: SO_0000673
so part of: LOC125319363
location: complement(5633195..5633263)
location: region:5633195-5633263:-1
so has part: feature:5633195-5633263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5633195-5633263:-1:exon

LOC125319348
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5759827..5785696)
location: region:5759827-5785696:-1
so has part: feature:5759827-5785696:-1:exon
subclass of: SO_0000010

125319348
type: Gene
SIO_000068: ncbigene

position:5759827:-1
position: 5759827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5785696:-1
position: 5785696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5759827-5785696:-1:exon

LOC125319348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319348
product: zinc finger protein 131-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290456.1
SIO_010081: LOC125319348
subclass of: SO_0000673
so part of: LOC125319348
location: complement(join(5759827..5760498,5763580..5763710,5778195..5778877,5781764..5781908,5783565..5783666,5785564..5785696))
location: region:5759827-5785696:-1
so has part: feature:5785564-5785696:-1:exon
so has part: feature:5783565-5783666:-1:exon
so has part: feature:5781764-5781908:-1:exon
so has part: feature:5778195-5778877:-1:exon
so has part: feature:5763580-5763710:-1:exon
so has part: feature:5759827-5760498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5785564-5785696:-1:exon

position:5785564:-1
position: 5785564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5783565-5783666:-1:exon

position:5783565:-1
position: 5783565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5783666:-1
position: 5783666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5781764-5781908:-1:exon

position:5781764:-1
position: 5781764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5781908:-1
position: 5781908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5778195-5778877:-1:exon

position:5778195:-1
position: 5778195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5778877:-1
position: 5778877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5763580-5763710:-1:exon

position:5763580:-1
position: 5763580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5763710:-1
position: 5763710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5759827-5760498:-1:exon

position:5760498:-1
position: 5760498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319348
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(5759836..5759838),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 131-like
translation: MEDEEIMECIQEFPEHYKVILDRLNEQREQDQFTDITLIVDGHHFKAHKAVLAACSQFFYKFFQDFTQEPLVEIEGVSNMAFRHLIEFTYTAKLMVQGEEEANDVWKAAEYLQMLEAIKALEIRNKENSSPLESNQRQGKNKAKKRKIAETSNVITETLPSAESEPVEIEVEIAEGTIEVEDDSIETLEVASAEQSIKYIHTTGTSDESALALLADITSKYRQGETKCQIQEGGSATDPSCKQVEDIEIVELQLSHVKNLFHCEKCNRSFKLFYHFKEHMKTHSAESYKCDICSKRYLRESALKQHLTCHHLDEGGASKKQRPGKKIHICQYCDKQFDHFGHFKEHLRKHTGEKPFECPNCHEHFARNSTLKCHLTACQSGAGAKKGRKKLYECQVCNSMFNSWDQFKNHLVIHTGDKPNHCTLCDLWFMQGSELRRHLKDMHNISERIVTEEILPVEAMEAEPVTSMTIIEQVEQVHVLPVIQVQVDPAQVTVEQMHQDLVQDNQVKGTQMEELQEQVQISYLEVEHIQTEQGAEVHVEQLHVGHVNRIQMEEVQAELIDGTNLEQVEYKSVDQREAEENETSQVDDTDMEDHEQAEDLKTQQLVDTQNEKVDNXDK
SIO_010081: LOC125319348
subclass of: SO_0000673
so part of: LOC125319348
location: complement(join(5759827..5760498,5763580..5763710,5778195..5778877,5781764..5781908,5783565..5783666,5785564..5785687))
location: region:5759827-5785687:-1
so has part: feature:5785564-5785687:-1:exon
so has part: feature:5783565-5783666:-1:exon
so has part: feature:5781764-5781908:-1:exon
so has part: feature:5778195-5778877:-1:exon
so has part: feature:5763580-5763710:-1:exon
so has part: feature:5759827-5760498:-1:exon

XP_048146413.1
type: Protein
SIO_000068: ncbiprotein

position:5785687:-1
position: 5785687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5785564-5785687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5783565-5783666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5781764-5781908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5778195-5778877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5763580-5763710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5759827-5760498:-1:exon

LOC125319333
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5899999..5907500)
location: region:5899999-5907500:-1
so has part: feature:5899999-5907500:-1:exon
subclass of: SO_0000010

125319333
type: Gene
SIO_000068: ncbigene

position:5899999:-1
position: 5899999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5907500:-1
position: 5907500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899999-5907500:-1:exon

LOC125319333
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319333
product: uncharacterized LOC125319333
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290440.1
SIO_010081: LOC125319333
subclass of: SO_0000673
so part of: LOC125319333
location: complement(join(5899999..5900004,5901297..5903062,5907324..5907500))
location: region:5899999-5907500:-1
so has part: feature:5907324-5907500:-1:exon
so has part: feature:5901297-5903062:-1:exon
so has part: feature:5899999-5900004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5907324-5907500:-1:exon

position:5907324:-1
position: 5907324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5901297-5903062:-1:exon

position:5901297:-1
position: 5901297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5903062:-1
position: 5903062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5899999-5900004:-1:exon

position:5900004:-1
position: 5900004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319333
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125319333
translation: MKMLGWHASITQKIVFLTVIIVTFSWEVIHKREDIWSQAFMRVTGLMGRYSDIKDLNLLTVVMHGNQMYTKQEWKKQRTWQLQGTVGDKIKIGCRMVNGTTHRKATQISVSTTPTDKHREICSYSSEADCWYNFTLVQTVEVVCLWGQDSNGLSFKFQINAMARPTTHSDDQIQTQVTLLKSEPKVYEIGPYVVRNTGQQLLLFNPEWSLKCVELLMQINISEIQPACSPLIQTSLEGWTAWLQKQTPLKGRMRRDLTGMLGTGLGVINGIDSEILMNKLATATSDLTKLKQPLQSSLLALGNSQWQVSKILPDLAKLSNLDHELILNTLGTAQDNVSLALSCIQAQLWMQSTASLIIREGNEGVFPIEIREAVWNNATKLERKLQSWWTLVNFTYDPRTNIATAFVLTIRNATVDVIHPIVALGLNHKGTVFYPSEHRVWARIVGEKWQTVNLESCITREQQGFICESNTLDARDICLDAEQGICHFEIHPDTSPKTVLVYIGQGCVCLRTICTSMIIDDNAINS
SIO_010081: LOC125319333
subclass of: SO_0000673
so part of: LOC125319333
location: complement(join(5899999..5900004,5901297..5902871))
location: region:5899999-5902871:-1
so has part: feature:5901297-5902871:-1:exon
so has part: feature:5899999-5900004:-1:exon

XP_048146397.1
type: Protein
SIO_000068: ncbiprotein

position:5902871:-1
position: 5902871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5901297-5902871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5899999-5900004:-1:exon

LOC125319351
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6058931..6063763
location: region:6058931-6063763:1
so has part: feature:6058931-6063763:1:exon
subclass of: SO_0000011

125319351
type: Gene
SIO_000068: ncbigene

position:6058931:1
position: 6058931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6063763:1
position: 6063763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6058931-6063763:1:exon

LOC125319351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319351
product: uncharacterized LOC125319351
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200673.1
SIO_010081: LOC125319351
subclass of: SO_0000673
so part of: LOC125319351
location: join(6058931..6060348,6060858..6061006,6062665..6063763)
location: region:6058931-6063763:1
so has part: feature:6058931-6060348:1:exon
so has part: feature:6060858-6061006:1:exon
so has part: feature:6062665-6063763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6058931-6060348:1:exon

position:6060348:1
position: 6060348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6060858-6061006:1:exon

position:6060858:1
position: 6060858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6061006:1
position: 6061006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6062665-6063763:1:exon

position:6062665:1
position: 6062665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319344
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6150224..6298478
location: region:6150224-6298478:1
so has part: feature:6150224-6298478:1:exon
subclass of: SO_0000010

125319344
type: Gene
SIO_000068: ncbigene

position:6150224:1
position: 6150224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6298478:1
position: 6298478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6150224-6298478:1:exon

LOC125319344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319344
product: spindlin-Z-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290449.1
SIO_010081: LOC125319344
subclass of: SO_0000673
so part of: LOC125319344
location: join(6150224..6150508,6261927..6262116,6278989..6279037,6291433..6291686,6292670..6292903,6294756..6298478)
location: region:6150224-6298478:1
so has part: feature:6150224-6150508:1:exon
so has part: feature:6261927-6262116:1:exon
so has part: feature:6278989-6279037:1:exon
so has part: feature:6291433-6291686:1:exon
so has part: feature:6292670-6292903:1:exon
so has part: feature:6294756-6298478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6150224-6150508:1:exon

position:6150508:1
position: 6150508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6261927-6262116:1:exon

position:6261927:1
position: 6261927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262116:1
position: 6262116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6278989-6279037:1:exon

position:6278989:1
position: 6278989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279037:1
position: 6279037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6291433-6291686:1:exon

position:6291433:1
position: 6291433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6291686:1
position: 6291686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6292670-6292903:1:exon

position:6292670:1
position: 6292670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6292903:1
position: 6292903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6294756-6298478:1:exon

position:6294756:1
position: 6294756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-Z-like isoform X1
translation: MKTPFGKSPGQRSRADAGHAGVSASMMKKRTSHKKHRNNVGPSKPISQPRRNIVGCRIQHGWREGSGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHKDERVSALEVLPDRVASSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC125319344
subclass of: SO_0000673
so part of: LOC125319344
location: join(6262065..6262116,6278989..6279037,6291433..6291686,6292670..6292903,6294756..6294955)
location: region:6262065-6294955:1
so has part: feature:6262065-6262116:1:exon
so has part: feature:6278989-6279037:1:exon
so has part: feature:6291433-6291686:1:exon
so has part: feature:6292670-6292903:1:exon
so has part: feature:6294756-6294955:1:exon

XP_048146406.1
type: Protein
SIO_000068: ncbiprotein

position:6262065:1
position: 6262065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6294955:1
position: 6294955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6262065-6262116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6278989-6279037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6291433-6291686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6292670-6292903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6294756-6294955:1:exon

LOC125319344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125319344
product: spindlin-Z-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290450.1
SIO_010081: LOC125319344
subclass of: SO_0000673
so part of: LOC125319344
location: join(6275546..6275634,6278989..6279037,6291433..6291686,6292670..6292903,6294756..6298478)
location: region:6275546-6298478:1
so has part: feature:6275546-6275634:1:exon
so has part: feature:6278989-6279037:1:exon
so has part: feature:6291433-6291686:1:exon
so has part: feature:6292670-6292903:1:exon
so has part: feature:6294756-6298478:1:exon

position:6275546:1
position: 6275546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6275546-6275634:1:exon

position:6275634:1
position: 6275634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6278989-6279037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6291433-6291686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6292670-6292903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6294756-6298478:1:exon

LOC125319344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125319344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-Z-like isoform X2
translation: MMKKRTSHKKHRNNVGPSKPISQPRRNIVGCRIQHGWREGSGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHKDERVSALEVLPDRVASSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC125319344
subclass of: SO_0000673
so part of: LOC125319344
location: join(6279012..6279037,6291433..6291686,6292670..6292903,6294756..6294955)
location: region:6279012-6294955:1
so has part: feature:6279012-6279037:1:exon
so has part: feature:6291433-6291686:1:exon
so has part: feature:6292670-6292903:1:exon
so has part: feature:6294756-6294955:1:exon

XP_048146407.1
type: Protein
SIO_000068: ncbiprotein

position:6279012:1
position: 6279012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279012-6279037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6291433-6291686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6292670-6292903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6294756-6294955:1:exon

LOC125319323
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6693304..6695903)
location: region:6693304-6695903:-1
so has part: feature:6693304-6695903:-1:exon
subclass of: SO_0000011

125319323
type: Gene
SIO_000068: ncbigene

position:6693304:-1
position: 6693304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6695903:-1
position: 6695903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6693304-6695903:-1:exon

LOC125319323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319323
product: uncharacterized LOC125319323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007200665.1
SIO_010081: LOC125319323
subclass of: SO_0000673
so part of: LOC125319323
location: complement(join(6693304..6693400,6694872..6694963,6695886..6695903))
location: region:6693304-6695903:-1
so has part: feature:6695886-6695903:-1:exon
so has part: feature:6694872-6694963:-1:exon
so has part: feature:6693304-6693400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6695886-6695903:-1:exon

position:6695886:-1
position: 6695886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6694872-6694963:-1:exon

position:6694872:-1
position: 6694872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6694963:-1
position: 6694963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6693304-6693400:-1:exon

position:6693400:-1
position: 6693400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319340
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6734995..6741075
location: region:6734995-6741075:1
so has part: feature:6734995-6741075:1:exon
subclass of: SO_0000011

125319340
type: Gene
SIO_000068: ncbigene

position:6734995:1
position: 6734995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6741075:1
position: 6741075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6734995-6741075:1:exon

LOC125319340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319340
product: uncharacterized LOC125319340
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007200669.1
SIO_010081: LOC125319340
subclass of: SO_0000673
so part of: LOC125319340
location: join(6734995..6735250,6735337..6735339,6741065..6741075)
location: region:6734995-6741075:1
so has part: feature:6734995-6735250:1:exon
so has part: feature:6735337-6735339:1:exon
so has part: feature:6741065-6741075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6734995-6735250:1:exon

position:6735250:1
position: 6735250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6735337-6735339:1:exon

position:6735337:1
position: 6735337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6735339:1
position: 6735339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6741065-6741075:1:exon

position:6741065:1
position: 6741065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition