Corvus hawaiiensis isolate bCorHaw1 chromosome 39, bCorHaw1.pri.cur, whole genome shotgun sequence.
type: Entry
definition: Corvus hawaiiensis isolate bCorHaw1 chromosome 39, bCorHaw1.pri.cur, whole genome shotgun sequence.
sequence version: NC_063251.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063251.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA838000
dblink: SAMN22550278
keyword: WGS
keyword: RefSeq
source: Corvus hawaiiensis (hawaiian crow)
organism: Corvus hawaiiensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036384.1.\nAssembly name: bCorHaw1.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2021\nAssembly Method :: HiFiasm v. 0.15.4+galaxy; purge_dups v.\n 1.2.5+galaxy3; Bionano Solve v.\n 3.6.1+galaxy2; Salsa v. 2.3+galaxy0;\n gEVAL manual curation v. 2021-09-20; VGP\n pipeline v. 2.0\nAssembly Name :: bCorHaw1.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 29.61x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina NovaSeq;\n Bionano Genomics Saphyr DLS; Arima\n Genomics Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus hawaiiensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 167149
topology: linear
so has quality: SO_0000987
location: 1..167149
location: region:1-167149:1
RO_0002162: 134902

NC_063251
type: RefSeq
SIO_000068: refseq

PRJNA838000
type: BioProject
SIO_000068: bioproject

SAMN22550278
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167149:1
position: 167149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-167149:1:source
so part of: sequence
organism: Corvus hawaiiensis
mol type: genomic DNA
isolate: bCorHaw1
chromosome: 39
sex: female
tissue type: blood
dev stage: adult
country: USA: University of Hawaii at Manoa
lat lon: 21.297467 N 157.818261 W
collection date: 2020-08-08
collected by: Bryce Masuda

134902
type: Taxonomy
SIO_000068: taxonomy

SRRT
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SRRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(607..15518)
location: region:607-15518:-1
so has part: feature:607-15518:-1:exon
subclass of: SO_0000010

125319268
type: Gene
SIO_000068: ncbigene

position:607:-1
position: 607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15518:-1
position: 15518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607-15518:-1:exon

SRRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SRRT
product: serrate, RNA effector molecule
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_048290389.1
SIO_010081: SRRT
subclass of: SO_0000673
so part of: SRRT
location: complement(join(607..753,1091..1183,2231..2390,2834..3026,3400..3553,4364..4561,5689..5940,6211..6289,6361..6422,6541..6752,7172..7266,7828..7944,8240..8408,9376..9545,12750..12938,13752..13907,14544..14669,14848..14967,15473..15518))
location: region:607-15518:-1
so has part: feature:15473-15518:-1:exon
so has part: feature:14848-14967:-1:exon
so has part: feature:14544-14669:-1:exon
so has part: feature:13752-13907:-1:exon
so has part: feature:12750-12938:-1:exon
so has part: feature:9376-9545:-1:exon
so has part: feature:8240-8408:-1:exon
so has part: feature:7828-7944:-1:exon
so has part: feature:7172-7266:-1:exon
so has part: feature:6541-6752:-1:exon
so has part: feature:6361-6422:-1:exon
so has part: feature:6211-6289:-1:exon
so has part: feature:5689-5940:-1:exon
so has part: feature:4364-4561:-1:exon
so has part: feature:3400-3553:-1:exon
so has part: feature:2834-3026:-1:exon
so has part: feature:2231-2390:-1:exon
so has part: feature:1091-1183:-1:exon
so has part: feature:607-753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15473-15518:-1:exon

position:15473:-1
position: 15473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14848-14967:-1:exon

position:14848:-1
position: 14848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14967:-1
position: 14967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14544-14669:-1:exon

position:14544:-1
position: 14544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14669:-1
position: 14669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13752-13907:-1:exon

position:13752:-1
position: 13752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13907:-1
position: 13907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12750-12938:-1:exon

position:12750:-1
position: 12750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12938:-1
position: 12938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9376-9545:-1:exon

position:9376:-1
position: 9376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9545:-1
position: 9545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8240-8408:-1:exon

position:8240:-1
position: 8240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8408:-1
position: 8408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7828-7944:-1:exon

position:7828:-1
position: 7828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7944:-1
position: 7944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7172-7266:-1:exon

position:7172:-1
position: 7172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7266:-1
position: 7266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6541-6752:-1:exon

position:6541:-1
position: 6541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6752:-1
position: 6752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6361-6422:-1:exon

position:6361:-1
position: 6361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6422:-1
position: 6422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6211-6289:-1:exon

position:6211:-1
position: 6211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6289:-1
position: 6289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5689-5940:-1:exon

position:5689:-1
position: 5689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5940:-1
position: 5940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4364-4561:-1:exon

position:4364:-1
position: 4364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4561:-1
position: 4561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3400-3553:-1:exon

position:3400:-1
position: 3400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553:-1
position: 3553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2834-3026:-1:exon

position:2834:-1
position: 2834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026:-1
position: 3026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2231-2390:-1:exon

position:2231:-1
position: 2231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390:-1
position: 2390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1091-1183:-1:exon

position:1091:-1
position: 1091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183:-1
position: 1183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:607-753:-1:exon

position:753:-1
position: 753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SRRT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serrate RNA effector molecule homolog
translation: MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRDDWSDRDWERGRERRSRDYRDYDRTRRERFSPPRHELSPPQKRLRRDWDDHGSDPYHSGYELPYSGGGAGPTYGPPQTPWGPHEMQHQLLQHQLLPIQARLGTIAEVDLGLAPPVMKSFKEFLLSLDDAVDETEAVKRYNDYKLDFRRQQLQEFFLAHKDEEWFRSKYHPDEAGKRQQEAQAALRNRLGVFLYLWEHGWFDNLLLDIDRAPQIIKTLDAAVIKMEGGTEHDLRILEQEEEEERTEKAEGPKKEEPRPPEPPGRAPLSALTATTAPRPKGRSQGRSLRQGQGRRRRRRGRTRGPRPRKVTRRAGARRGPRQRSRDSEDGDSDSGDSEGGARRAQNKDEEPKDDKSHPEDDAGTLPPTTTPSPPQKPKEGVPGAAPGGVPDPKPRPLHKTCSLFMRNIAPNIAQAEIVALCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWSLQNIRLRECELSPGVNRDLTRRVRNVSGLTQHRPIVRHDIKLAARLVQALDARARLWSPPGTGTAGQEPPGDSGDTHGDTEPPPATEPGAQNPVLRHITDYLIEEVSAEEEELLGQGQGQGQGQGQGPGATPAEDAARESHPAEVTVERDEKLLKVLDRLLLYLRIVHSVDYYNTSEYPNEDEMPNRCGIIHVRGPLPPNRVSHGEVSEWQRXFEARLAPLLAGPGAVPEEEALRLGRKDPEQELEKFVSANTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHGDKMGAVRKEVLFFNNFLMDPKRPALPEGGKGGPNAGPNAGLAPGALPYPPQSPQGLMPYGTPRPPMLGYGGSHPYPPGPYGGRGSYETFRGQGGAGGGYLNKPRSR
SIO_010081: SRRT
subclass of: SO_0000673
so part of: SRRT
location: complement(join(644..753,1091..1183,2231..2390,2834..3026,3400..3553,4364..4561,5689..5940,6211..6289,6361..6422,6541..6752,7172..7266,7828..7944,8240..8408,9376..9545,12750..12938,13752..13907,14544..14669,14848..14966))
location: region:644-14966:-1
so has part: feature:14848-14966:-1:exon
so has part: feature:14544-14669:-1:exon
so has part: feature:13752-13907:-1:exon
so has part: feature:12750-12938:-1:exon
so has part: feature:9376-9545:-1:exon
so has part: feature:8240-8408:-1:exon
so has part: feature:7828-7944:-1:exon
so has part: feature:7172-7266:-1:exon
so has part: feature:6541-6752:-1:exon
so has part: feature:6361-6422:-1:exon
so has part: feature:6211-6289:-1:exon
so has part: feature:5689-5940:-1:exon
so has part: feature:4364-4561:-1:exon
so has part: feature:3400-3553:-1:exon
so has part: feature:2834-3026:-1:exon
so has part: feature:2231-2390:-1:exon
so has part: feature:1091-1183:-1:exon
so has part: feature:644-753:-1:exon

XP_048146346.1
type: Protein
SIO_000068: ncbiprotein

position:644:-1
position: 644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14966:-1
position: 14966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14848-14966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14544-14669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13752-13907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12750-12938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9376-9545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8240-8408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7828-7944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7172-7266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6541-6752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6361-6422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6211-6289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5689-5940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4364-4561:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3400-3553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2834-3026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2231-2390:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1091-1183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:644-753:-1:exon

EPHB4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: EPHB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17088..29352
location: region:17088-29352:1
so has part: feature:17088-29352:1:exon
subclass of: SO_0000010

125319256
type: Gene
SIO_000068: ncbigene

position:17088:1
position: 17088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29352:1
position: 29352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17088-29352:1:exon

EPHB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: EPHB4
product: EPH receptor B4
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 5 codons
transcript id: XM_048290377.1
SIO_010081: EPHB4
subclass of: SO_0000673
so part of: EPHB4
location: join(17088..17995,18517..18587,19484..19713,20875..21388,21942..22097,22471..22816,23164..23295,23728..23892,24513..24612,25090..25151,25431..25544,25896..26143,26596..26814,27097..27246,27565..27758,27982..28167,28308..29352)
location: region:17088-29352:1
so has part: feature:17088-17995:1:exon
so has part: feature:18517-18587:1:exon
so has part: feature:19484-19713:1:exon
so has part: feature:20875-21388:1:exon
so has part: feature:21942-22097:1:exon
so has part: feature:22471-22816:1:exon
so has part: feature:23164-23295:1:exon
so has part: feature:23728-23892:1:exon
so has part: feature:24513-24612:1:exon
so has part: feature:25090-25151:1:exon
so has part: feature:25431-25544:1:exon
so has part: feature:25896-26143:1:exon
so has part: feature:26596-26814:1:exon
so has part: feature:27097-27246:1:exon
so has part: feature:27565-27758:1:exon
so has part: feature:27982-28167:1:exon
so has part: feature:28308-29352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17088-17995:1:exon

position:17995:1
position: 17995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18517-18587:1:exon

position:18517:1
position: 18517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18587:1
position: 18587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19484-19713:1:exon

position:19484:1
position: 19484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19713:1
position: 19713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20875-21388:1:exon

position:20875:1
position: 20875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21388:1
position: 21388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21942-22097:1:exon

position:21942:1
position: 21942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22097:1
position: 22097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22471-22816:1:exon

position:22471:1
position: 22471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22816:1
position: 22816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23164-23295:1:exon

position:23164:1
position: 23164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23295:1
position: 23295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:23728-23892:1:exon

position:23728:1
position: 23728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23892:1
position: 23892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24513-24612:1:exon

position:24513:1
position: 24513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24612:1
position: 24612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:25090-25151:1:exon

position:25090:1
position: 25090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25151:1
position: 25151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:25431-25544:1:exon

position:25431:1
position: 25431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25544:1
position: 25544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:25896-26143:1:exon

position:25896:1
position: 25896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26143:1
position: 26143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:26596-26814:1:exon

position:26596:1
position: 26596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26814:1
position: 26814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:27097-27246:1:exon

position:27097:1
position: 27097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27246:1
position: 27246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:27565-27758:1:exon

position:27565:1
position: 27565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27758:1
position: 27758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:27982-28167:1:exon

position:27982:1
position: 27982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28167:1
position: 28167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:28308-29352:1:exon

position:28308:1
position: 28308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPHB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: EPHB4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ephrin type-B receptor 4
translation: MGLWLFWLWVPLGLAEEETLLDTRLETSDLHWTVHPQGEGQWEELSALDAELGGAVRTFEVCSGRGRPGAPPNGRDPPQPGRDPPPQNSWLRSRWVPRGAATTVLAEIRFTVMACDSLPGPARPCKETFGVFYHESDADTATATSPPWMENPYVKVDTVAAEHLARPGGGPRGPQGRVNRKVLRLGPLSRAGFYVAFQDLGACMALLSVRLFFRRCPAATARLARFPATVPAELVAPVAGACVAGAVPAAEGVPLMYCREDGRWAEPPALGCVCGAGMEPSEGAGVSALSPRDVQGGAGGGSVPALPPPERSPLPRSPLLSLPPRILPSPRRGTPGSLLRPPSAPPRPGRPCERVSCPAILEPPRAGGDRPDLRYHVGVPGVPPPPAGPPPSCGPCGPLAWAPPPGAADPPPSAWPGCGRGSPTASGSAPAAGSPPRAPPEPPAPRSTSRPGADVPPPVSDVVRVGGGPGGVTLAWPAPPGGPPGPPVLDYEVKYYEKLGGGEGPPQFLKVPRPRAELXGLRRGGLYGVRVRARSEGGYGDFGPETTVSAPGSEGSRGGPGGVVAGAAALGGLLVLALLGGALAGLRRWRLRAEKQRRGPGPTPGGLGGKLYIDPLTYEDPEVALRDFAQEIDVTCVTIEEVIGAGEFGEVWRGRLSLPGQPEAEVAVKTLKGGAGERQRREFLREAARMGQFRHPNVVRLRGVVSAGPPAMIVTEFLLHGALDAFLRGREGTLSPLQLVAMLRGIAAGMRYLAEAGFVHRDLAARNILVDAHLVCKVSDFGLSRALDGDRDSDPTYTSSLGGKIPIRWTAPEAIAFRTFTSASDAWSYGIVMWEVLSFGERPYWDMSNQDVINAIEQDYRLPPPPRCPPPLHRLMLDCWQRERSARPTFPHIVRALDRLIRRPESLRVAPPDPHGSSPACLEQRGAPGPTSPGPAPAAPPGPSVGEWLRGLGLGGYEEPFCSAGVTGLELLPRLRSEDLLRMGVTLAGHQQMILEGAQSLRSPPKGDPQC
SIO_010081: EPHB4
subclass of: SO_0000673
so part of: EPHB4
location: join(17944..17995,18517..18587,19484..19713,20875..21388,21942..22097,22471..22816,23164..23295,23728..23892,24513..24612,25090..25151,25431..25544,25896..26143,26596..26814,27097..27246,27565..27758,27982..28167,28308..28410)
location: region:17944-28410:1
so has part: feature:17944-17995:1:exon
so has part: feature:18517-18587:1:exon
so has part: feature:19484-19713:1:exon
so has part: feature:20875-21388:1:exon
so has part: feature:21942-22097:1:exon
so has part: feature:22471-22816:1:exon
so has part: feature:23164-23295:1:exon
so has part: feature:23728-23892:1:exon
so has part: feature:24513-24612:1:exon
so has part: feature:25090-25151:1:exon
so has part: feature:25431-25544:1:exon
so has part: feature:25896-26143:1:exon
so has part: feature:26596-26814:1:exon
so has part: feature:27097-27246:1:exon
so has part: feature:27565-27758:1:exon
so has part: feature:27982-28167:1:exon
so has part: feature:28308-28410:1:exon

XP_048146334.1
type: Protein
SIO_000068: ncbiprotein

position:17944:1
position: 17944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28410:1
position: 28410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17944-17995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18517-18587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19484-19713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20875-21388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21942-22097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22471-22816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23164-23295:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23728-23892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24513-24612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:25090-25151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:25431-25544:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:25896-26143:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:26596-26814:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27097-27246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27565-27758:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27982-28167:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:28308-28410:1:exon

TFR2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TFR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28623..36591)
location: region:28623-36591:-1
so has part: feature:28623-36591:-1:exon
subclass of: SO_0000010

125319257
type: Gene
SIO_000068: ncbigene

position:28623:-1
position: 28623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36591:-1
position: 36591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28623-36591:-1:exon

TFR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TFR2
product: transferrin receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048290378.1
SIO_010081: TFR2
subclass of: SO_0000673
so part of: TFR2
location: complement(join(28623..28628,29659..29958,30276..30416,30625..30837,30911..30995,31087..31163,31262..31329,31439..31502,31585..31667,31988..32107,32612..33104,33561..33677,33799..33921,33992..34097,34232..34366,34557..34746,35485..35695,35800..35869,36285..36591))
location: region:28623-36591:-1
so has part: feature:36285-36591:-1:exon
so has part: feature:35800-35869:-1:exon
so has part: feature:35485-35695:-1:exon
so has part: feature:34557-34746:-1:exon
so has part: feature:34232-34366:-1:exon
so has part: feature:33992-34097:-1:exon
so has part: feature:33799-33921:-1:exon
so has part: feature:33561-33677:-1:exon
so has part: feature:32612-33104:-1:exon
so has part: feature:31988-32107:-1:exon
so has part: feature:31585-31667:-1:exon
so has part: feature:31439-31502:-1:exon
so has part: feature:31262-31329:-1:exon
so has part: feature:31087-31163:-1:exon
so has part: feature:30911-30995:-1:exon
so has part: feature:30625-30837:-1:exon
so has part: feature:30276-30416:-1:exon
so has part: feature:29659-29958:-1:exon
so has part: feature:28623-28628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36285-36591:-1:exon

position:36285:-1
position: 36285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35800-35869:-1:exon

position:35800:-1
position: 35800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35869:-1
position: 35869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35485-35695:-1:exon

position:35485:-1
position: 35485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35695:-1
position: 35695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34557-34746:-1:exon

position:34557:-1
position: 34557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34746:-1
position: 34746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34232-34366:-1:exon

position:34232:-1
position: 34232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34366:-1
position: 34366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33992-34097:-1:exon

position:33992:-1
position: 33992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34097:-1
position: 34097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33799-33921:-1:exon

position:33799:-1
position: 33799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33921:-1
position: 33921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33561-33677:-1:exon

position:33561:-1
position: 33561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33677:-1
position: 33677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32612-33104:-1:exon

position:32612:-1
position: 32612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33104:-1
position: 33104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31988-32107:-1:exon

position:31988:-1
position: 31988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32107:-1
position: 32107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31585-31667:-1:exon

position:31585:-1
position: 31585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31667:-1
position: 31667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:31439-31502:-1:exon

position:31439:-1
position: 31439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31502:-1
position: 31502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:31262-31329:-1:exon

position:31262:-1
position: 31262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31329:-1
position: 31329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:31087-31163:-1:exon

position:31087:-1
position: 31087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31163:-1
position: 31163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:30911-30995:-1:exon

position:30911:-1
position: 30911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30995:-1
position: 30995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:30625-30837:-1:exon

position:30625:-1
position: 30625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30837:-1
position: 30837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:30276-30416:-1:exon

position:30276:-1
position: 30276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30416:-1
position: 30416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:29659-29958:-1:exon

position:29659:-1
position: 29659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29958:-1
position: 29958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:28623-28628:-1:exon

position:28628:-1
position: 28628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TFR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TFR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transferrin receptor protein 2
translation: MGARTWRCRSRPRPRPRPHQTLPGHAHSLQTTPIPYKPRPFPTNHAPFPPRPRPGHAAFSHLWGRGHSGFGSRGTPGIRWDSPRPPMETLRRCFRARPPGGGPVSYSRHRDPRGENEEEEEAEPTVQLPRPRPRPRPRPRRKPRPQPRLWLHPLATLALGSATAFLLGLLVAGIGHAPCGGGAAGAGPLAGGSTPDGVWGGASAEAPPPRPRLRELLRRHLVEERVEAWVREVSAGPHGAGSGRGRALAQSVLSALAEAGLTQAWSRPQPLPLPIRGEVTLRWVGPEGDELERLPLDPDAFCAWSAPGNATGGLVYGHYGRPQDLAQLRARGVSARGHLMLLRLGRGSPAQKVAAAAGAGAVGVLLYPDPQDTAGPGGGPGLGGDTAVTVHVQEGPGDPFSRGFPSFSGRVPPGTPPGSPPIPVHPRERRHGRAAAAVQETPPQIWDPQIWDPSPKSGTPLEPETSPRSPPTHLPHHFSVLGFPTPPAHLPLPISGSWGVPEPPRTGSRPGGAWGGSLRFLPGPGERRLQLSVGGGTQPGTLTSVFGALRGRLEPDCYVIVGARRDSLGPGAAASGVGTALLLELAWFFAAIGREGFQLRRTLLFVSWDGGEFGHLGATEWLEGYPDLLHTKVAAYISLDQAVLGAERFVVRTSPTLVNLIESALEQVESPNEAGKSLLEQLTRPGRVWESDVVRPLSPDCGAFPFTAAAGVPALELGFDEAVPGGSRAALGTREDTLGRLGGRLRGRLPAVARAVAAVAAQLLLRLGHDPRLPLDPGALGDELVRQLAPLQARGLSLQCLSSARGGVVRAAASLRRDMSGSDSSNERLNRGFNARLMAAEASLLSPFVSPLVTPFRHVLLGRGGHTLPALVAELGTAGTRRDSARLRLALLAWTLRGTAGALAGDSWDCGDLGDRGGLGDNGDCGDMGGSGDIGDHGGP
SIO_010081: TFR2
subclass of: SO_0000673
so part of: TFR2
location: complement(join(28623..28628,29659..29958,30276..30416,30625..30837,30911..30995,31087..31163,31262..31329,31439..31502,31585..31667,31988..32107,32612..33104,33561..33677,33799..33921,33992..34097,34232..34366,34557..34746,35485..35695,35800..35869,36285..36505))
location: region:28623-36505:-1
so has part: feature:36285-36505:-1:exon
so has part: feature:35800-35869:-1:exon
so has part: feature:35485-35695:-1:exon
so has part: feature:34557-34746:-1:exon
so has part: feature:34232-34366:-1:exon
so has part: feature:33992-34097:-1:exon
so has part: feature:33799-33921:-1:exon
so has part: feature:33561-33677:-1:exon
so has part: feature:32612-33104:-1:exon
so has part: feature:31988-32107:-1:exon
so has part: feature:31585-31667:-1:exon
so has part: feature:31439-31502:-1:exon
so has part: feature:31262-31329:-1:exon
so has part: feature:31087-31163:-1:exon
so has part: feature:30911-30995:-1:exon
so has part: feature:30625-30837:-1:exon
so has part: feature:30276-30416:-1:exon
so has part: feature:29659-29958:-1:exon
so has part: feature:28623-28628:-1:exon

XP_048146335.1
type: Protein
SIO_000068: ncbiprotein

position:36505:-1
position: 36505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36285-36505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35800-35869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35485-35695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34557-34746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34232-34366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33992-34097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33799-33921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33561-33677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32612-33104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31988-32107:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31585-31667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:31439-31502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:31262-31329:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:31087-31163:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:30911-30995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30625-30837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:30276-30416:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:29659-29958:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:28623-28628:-1:exon

EPO
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: EPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36727..39910)
location: region:36727-39910:-1
so has part: feature:36727-39910:-1:exon
subclass of: SO_0000010

125319258
type: Gene
SIO_000068: ncbigene

position:36727:-1
position: 36727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39910:-1
position: 39910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36727-39910:-1:exon

EPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: EPO
product: erythropoietin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290379.1
SIO_010081: EPO
subclass of: SO_0000673
so part of: EPO
location: complement(join(36727..37385,37960..38124,38658..38744,39056..39192,39834..39910))
location: region:36727-39910:-1
so has part: feature:39834-39910:-1:exon
so has part: feature:39056-39192:-1:exon
so has part: feature:38658-38744:-1:exon
so has part: feature:37960-38124:-1:exon
so has part: feature:36727-37385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39834-39910:-1:exon

position:39834:-1
position: 39834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39056-39192:-1:exon

position:39056:-1
position: 39056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39192:-1
position: 39192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38658-38744:-1:exon

position:38658:-1
position: 38658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38744:-1
position: 38744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37960-38124:-1:exon

position:37960:-1
position: 37960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38124:-1
position: 38124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36727-37385:-1:exon

position:37385:-1
position: 37385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: EPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythropoietin
translation: MGAAGLCALLLLLLGVPGRPQPPPEGPPSLCDPRVIERFILEARDAERGAAGCGPLCDLPEPVAVPDPGVNFNLWRSLDAGSRAQEVAGGQAALAAAVLRARELLRDPRVRPSLDRAYGAARSLARLLRGLPAPAPPPPSPPAPVRVRTLPRLLGVLSRFLRGKVRLFLADACPR
SIO_010081: EPO
subclass of: SO_0000673
so part of: EPO
location: complement(join(37260..37385,37960..38124,38658..38744,39056..39192,39834..39846))
location: region:37260-39846:-1
so has part: feature:39834-39846:-1:exon
so has part: feature:39056-39192:-1:exon
so has part: feature:38658-38744:-1:exon
so has part: feature:37960-38124:-1:exon
so has part: feature:37260-37385:-1:exon

XP_048146336.1
type: Protein
SIO_000068: ncbiprotein

position:37260:-1
position: 37260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39846:-1
position: 39846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39834-39846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39056-39192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38658-38744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37960-38124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37260-37385:-1:exon

POP7
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: POP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41600..43408)
location: region:41600-43408:-1
so has part: feature:41600-43408:-1:exon
subclass of: SO_0000010

125319265
type: Gene
SIO_000068: ncbigene

position:41600:-1
position: 41600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43408:-1
position: 43408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41600-43408:-1:exon

POP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: POP7
product: POP7 homolog, ribonuclease P/MRP subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290385.1
SIO_010081: POP7
subclass of: SO_0000673
so part of: POP7
location: complement(join(41600..42735,43012..43408))
location: region:41600-43408:-1
so has part: feature:43012-43408:-1:exon
so has part: feature:41600-42735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43012-43408:-1:exon

position:43012:-1
position: 43012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41600-42735:-1:exon

position:42735:-1
position: 42735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: POP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p20
translation: MLRGGARFAVGVAPEGAWPRSGSGGGAGRARMSSGRPAAPSPPPGGLPGPPSRRRRRGPAPRPPPGLPPAAGPGTNDVFVTSRSDFRAQLRRCQRLLAPGGGPGGGSGELRLHGLGLAVPRAINLALQLQAGAGGALRLHASTSSVPLRPPRGHRGTPPPRGDGDEDGDGDGEDGDPPRHNSAIHIRLCREAPCA
SIO_010081: POP7
subclass of: SO_0000673
so part of: POP7
location: complement(join(42240..42735,43012..43103))
location: region:42240-43103:-1
so has part: feature:43012-43103:-1:exon
so has part: feature:42240-42735:-1:exon

XP_048146342.1
type: Protein
SIO_000068: ncbiprotein

position:42240:-1
position: 42240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43103:-1
position: 43103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43012-43103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42240-42735:-1:exon

ACTL6B
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ACTL6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43483..47783
location: region:43483-47783:1
so has part: feature:43483-47783:1:exon
subclass of: SO_0000010

125319263
type: Gene
SIO_000068: ncbigene

position:43483:1
position: 43483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47783:1
position: 47783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43483-47783:1:exon

ACTL6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ACTL6B
product: actin like 6B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_048290383.1
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: join(43483..43580,43971..44047,44261..44426,44788..44888,44964..45061,45362..45456,45636..45742,46074..46163,46407..46468,46549..46663,46912..46992,47083..47178,47455..47541,47628..47783)
location: region:43483-47783:1
so has part: feature:43483-43580:1:exon
so has part: feature:43971-44047:1:exon
so has part: feature:44261-44426:1:exon
so has part: feature:44788-44888:1:exon
so has part: feature:44964-45061:1:exon
so has part: feature:45362-45456:1:exon
so has part: feature:45636-45742:1:exon
so has part: feature:46074-46163:1:exon
so has part: feature:46407-46468:1:exon
so has part: feature:46549-46663:1:exon
so has part: feature:46912-46992:1:exon
so has part: feature:47083-47178:1:exon
so has part: feature:47455-47541:1:exon
so has part: feature:47628-47783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43483-43580:1:exon

position:43580:1
position: 43580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43971-44047:1:exon

position:43971:1
position: 43971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44047:1
position: 44047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44261-44426:1:exon

position:44261:1
position: 44261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44426:1
position: 44426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44788-44888:1:exon

position:44788:1
position: 44788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44888:1
position: 44888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44964-45061:1:exon

position:44964:1
position: 44964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45061:1
position: 45061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45362-45456:1:exon

position:45362:1
position: 45362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45456:1
position: 45456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45636-45742:1:exon

position:45636:1
position: 45636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45742:1
position: 45742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46074-46163:1:exon

position:46074:1
position: 46074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46163:1
position: 46163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46407-46468:1:exon

position:46407:1
position: 46407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46468:1
position: 46468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46549-46663:1:exon

position:46549:1
position: 46549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46663:1
position: 46663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46912-46992:1:exon

position:46912:1
position: 46912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46992:1
position: 46992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:47083-47178:1:exon

position:47083:1
position: 47083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47178:1
position: 47178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:47455-47541:1:exon

position:47455:1
position: 47455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47541:1
position: 47541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:47628-47783:1:exon

position:47628:1
position: 47628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACTL6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ACTL6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-like protein 6B
translation: MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLSPDEVSLELDGDKDKKGGKVYYIDTNALHVAREGVEVLSPLKNGMIEDWECFQAILDHTYGKHVKSEPGLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYILQQGIVKSPLAGDFISMQCRELFQELNIDIVPPYMIAAKEPVREGAPPSWKKKEKLPQVSKSWHNFTCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELAQKTPPSMRLKLIASNSTMERRFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: join(43556..43580,43971..44047,44261..44426,44788..44888,44964..45061,45362..45456,45636..45742,46074..46163,46407..46468,46549..46663,46912..46992,47083..47178,47455..47541,47628..47708)
location: region:43556-47708:1
so has part: feature:43556-43580:1:exon
so has part: feature:43971-44047:1:exon
so has part: feature:44261-44426:1:exon
so has part: feature:44788-44888:1:exon
so has part: feature:44964-45061:1:exon
so has part: feature:45362-45456:1:exon
so has part: feature:45636-45742:1:exon
so has part: feature:46074-46163:1:exon
so has part: feature:46407-46468:1:exon
so has part: feature:46549-46663:1:exon
so has part: feature:46912-46992:1:exon
so has part: feature:47083-47178:1:exon
so has part: feature:47455-47541:1:exon
so has part: feature:47628-47708:1:exon

XP_048146340.1
type: Protein
SIO_000068: ncbiprotein

position:43556:1
position: 43556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47708:1
position: 47708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43556-43580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43971-44047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44261-44426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44788-44888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44964-45061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45362-45456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45636-45742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46074-46163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46407-46468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46549-46663:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46912-46992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47083-47178:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47455-47541:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47628-47708:1:exon

MEPCE
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: MEPCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 48850..52329
location: region:48850-52329:1
so has part: feature:48850-52329:1:exon
subclass of: SO_0000010

125319261
type: Gene
SIO_000068: ncbigene

position:48850:1
position: 48850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52329:1
position: 52329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48850-52329:1:exon

MEPCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MEPCE
product: methylphosphate capping enzyme
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290382.1
SIO_010081: MEPCE
subclass of: SO_0000673
so part of: MEPCE
location: join(48850..49998,50799..51017,51510..51636,51969..52329)
location: region:48850-52329:1
so has part: feature:48850-49998:1:exon
so has part: feature:50799-51017:1:exon
so has part: feature:51510-51636:1:exon
so has part: feature:51969-52329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48850-49998:1:exon

position:49998:1
position: 49998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50799-51017:1:exon

position:50799:1
position: 50799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51017:1
position: 51017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51510-51636:1:exon

position:51510:1
position: 51510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51636:1
position: 51636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51969-52329:1:exon

position:51969:1
position: 51969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEPCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MEPCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 7SK snRNA methylphosphate capping enzyme
translation: MAAAPEAFLVPPPPPPPPAAAAAPPGPSDPPEPPRPRNGLRAAGGGGGKRRSSCGAKQPAWKRRRRAASECGPVLPSEFLLGGNIFDPLNLNSLLDEEVSRALNARTPQSSPLPQRGRDPVEILVPRDITDPLSLNAPGEGLRLASPAKSARRRHRHRGQQRGNTASAASASTASTAPGEEPARPAEPSAASTAPPCPAALPAPGRHRKRRRTCSKSEGPRPPPPPAAEKPKPPGKAAQRPRHQVRKFQYGNYCKYYGYRNPDVEDARLRALRPEWFTGKEVLDVGCNVGHLTLSIAKRWAPARVVGLDIDGRLIRSARQNIRHYLSEGLGADGDAAGGARKGFPAALLASRGPIAAPQLPPDGPGAADFPHNVVFVTGNYVPEREEAVGAQRPEFDVVLLLSLTKWVQLNWGDEGLKRLFRRAFRHLRPGGILLLEPQPWESYRKRKGLTETTYRNYQRIRLRPEQFPAYLTSPEVGFERCELLGTPQHSSKGFQRPIYLFHKGRGDAP
SIO_010081: MEPCE
subclass of: SO_0000673
so part of: MEPCE
location: join(48865..49998,50799..51017,51510..51636,51969..52021)
location: region:48865-52021:1
so has part: feature:48865-49998:1:exon
so has part: feature:50799-51017:1:exon
so has part: feature:51510-51636:1:exon
so has part: feature:51969-52021:1:exon

XP_048146339.1
type: Protein
SIO_000068: ncbiprotein

position:48865:1
position: 48865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52021:1
position: 52021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48865-49998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50799-51017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51510-51636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51969-52021:1:exon

PPP1R35
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PPP1R35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52318..53600)
location: region:52318-53600:-1
so has part: feature:52318-53600:-1:exon
subclass of: SO_0000010

125319264
type: Gene
SIO_000068: ncbigene

position:52318:-1
position: 52318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53600:-1
position: 53600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52318-53600:-1:exon

PPP1R35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PPP1R35
product: protein phosphatase 1 regulatory subunit 35
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290384.1
SIO_010081: PPP1R35
subclass of: SO_0000673
so part of: PPP1R35
location: complement(join(52318..52549,52641..52753,52833..53058,53286..53600))
location: region:52318-53600:-1
so has part: feature:53286-53600:-1:exon
so has part: feature:52833-53058:-1:exon
so has part: feature:52641-52753:-1:exon
so has part: feature:52318-52549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53286-53600:-1:exon

position:53286:-1
position: 53286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52833-53058:-1:exon

position:52833:-1
position: 52833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53058:-1
position: 53058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52641-52753:-1:exon

position:52641:-1
position: 52641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52753:-1
position: 52753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52318-52549:-1:exon

position:52549:-1
position: 52549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PPP1R35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 35
translation: MRPRAVPPPPPPPPPGGILRRGGRGGGNRQVRFALSPAEPDEEEENEEGAVPAPPPLPLATPTLHSSRGVAGGAPPEPFDASRAAAALLGSSFAARNALGGAAAAAMNVPQAQRLFRGLVSLAVPPPPGPRRGVPATPVPTPQVPGPELGVLAGGAGRGMGWPWLPPPNPPEPPRALPRPPGAAFAMYQKLQQWEGC
SIO_010081: PPP1R35
subclass of: SO_0000673
so part of: PPP1R35
location: complement(join(52385..52549,52641..52753,52833..53058,53286..53375))
location: region:52385-53375:-1
so has part: feature:53286-53375:-1:exon
so has part: feature:52833-53058:-1:exon
so has part: feature:52641-52753:-1:exon
so has part: feature:52385-52549:-1:exon

XP_048146341.1
type: Protein
SIO_000068: ncbiprotein

position:52385:-1
position: 52385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53375:-1
position: 53375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53286-53375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52833-53058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52641-52753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52385-52549:-1:exon

TSC22D4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TSC22D4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53646..55219)
location: region:53646-55219:-1
so has part: feature:53646-55219:-1:exon
subclass of: SO_0000010

125319266
type: Gene
SIO_000068: ncbigene

position:53646:-1
position: 53646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55219:-1
position: 55219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53646-55219:-1:exon

TSC22D4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TSC22D4
product: TSC22 domain family member 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290387.1
SIO_010081: TSC22D4
subclass of: SO_0000673
so part of: TSC22D4
location: complement(join(53646..53990,54270..54318,54570..54664,54741..55219))
location: region:53646-55219:-1
so has part: feature:54741-55219:-1:exon
so has part: feature:54570-54664:-1:exon
so has part: feature:54270-54318:-1:exon
so has part: feature:53646-53990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54741-55219:-1:exon

position:54741:-1
position: 54741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54570-54664:-1:exon

position:54570:-1
position: 54570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54664:-1
position: 54664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54270-54318:-1:exon

position:54270:-1
position: 54270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54318:-1
position: 54318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53646-53990:-1:exon

position:53990:-1
position: 53990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSC22D4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TSC22D4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 4
translation: MSRKKSGFAITSVRGGSGTAPGDASGAATGSSSSSSGSPSGSRFRLVRLLSPGEVLRRGRWLCRDFYERDASPRGGGGGGGRVPVSLDAPRAIAAPHQPRSLGAFAQLVQQALPPKPPSPRPGGGAELSARLGLAGEESEDEGAGSGVTAIDNKIERAMDLVKSHLLLAVREEVEALREQIRELSERRAALERENRLLRALATPQQLARLHSPQPPGPPSGPS
SIO_010081: TSC22D4
subclass of: SO_0000673
so part of: TSC22D4
location: complement(join(53796..53990,54270..54318,54570..54664,54741..55073))
location: region:53796-55073:-1
so has part: feature:54741-55073:-1:exon
so has part: feature:54570-54664:-1:exon
so has part: feature:54270-54318:-1:exon
so has part: feature:53796-53990:-1:exon

XP_048146344.1
type: Protein
SIO_000068: ncbiprotein

position:53796:-1
position: 53796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55073:-1
position: 55073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54741-55073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54570-54664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54270-54318:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53796-53990:-1:exon

NYAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: NYAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 55289..59118
location: region:55289-59118:1
so has part: feature:55289-59118:1:exon
subclass of: SO_0000010

125319259
type: Gene
SIO_000068: ncbigene

position:55289:1
position: 55289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59118:1
position: 59118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55289-59118:1:exon

NYAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: NYAP1
product: neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048290380.1
SIO_010081: NYAP1
subclass of: SO_0000673
so part of: NYAP1
location: join(55289..55387,55468..55612,56276..56426,56894..57129,57296..58144,58228..58374,58723..59118)
location: region:55289-59118:1
so has part: feature:55289-55387:1:exon
so has part: feature:55468-55612:1:exon
so has part: feature:56276-56426:1:exon
so has part: feature:56894-57129:1:exon
so has part: feature:57296-58144:1:exon
so has part: feature:58228-58374:1:exon
so has part: feature:58723-59118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55289-55387:1:exon

position:55387:1
position: 55387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55468-55612:1:exon

position:55468:1
position: 55468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55612:1
position: 55612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56276-56426:1:exon

position:56276:1
position: 56276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56426:1
position: 56426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56894-57129:1:exon

position:56894:1
position: 56894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57129:1
position: 57129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57296-58144:1:exon

position:57296:1
position: 57296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58144:1
position: 58144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58228-58374:1:exon

position:58228:1
position: 58228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58374:1
position: 58374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58723-59118:1:exon

position:58723:1
position: 58723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NYAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: NYAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
translation: MSAPPRSELAAAAAALLRLGEERPPAAAMNLLQRKGRPEWRPREEEPRKGVPKARDGGSLRRPLRVGFLTLPAPQERGPRPCAPGMAPRSLSCHAVGLPDSGVPLRPPGPRTGPPEGRGLEAPPAKRGGTPRGGCVRQTPPLKPSRSPQTRLSAGAPPPPLAEQGEGEEPVYIEMVGDARGIPGTDPRRGGAGRSTPPPAEEPEAIYEEMSCPLPAGEGPGHAPFQGHAPFHGHAPHTAHAAFSGHVPHSGHAPYTGHAPFSGHAPHAGRAPFIGHAPFSGPAPGPAPIPPPFPNLLRPAPPRWPRPPRAPRACRSPRAARPLPPPARAATPRPSPRTTRREGRGASAGGRGSGRCRSRLPPKPRPPESARPPTRACGGGVASGGPAPAREEDPPSRRGGGASSRRGKETEKAPEPPREERGGAGAVPPPSGIPVRAEGPRGRPGPPLPCQTFPACGRPSELPGGPRLGRSASTSGVRQAGAPPFPRGPPSSRPLSGGVPGGGPGGGFPAAPRPRDGQLQEVIDRKRCVCTEIKARGGGGGGLCKQDSLPPLPAPPAWKGGAAPEGRPPPPPPPGTPPARRPHAVLWDTAI
SIO_010081: NYAP1
subclass of: SO_0000673
so part of: NYAP1
location: join(56278..56426,56894..57129,57296..58144,58228..58374,58723..59118)
location: region:56278-59118:1
so has part: feature:56278-56426:1:exon
so has part: feature:56894-57129:1:exon
so has part: feature:57296-58144:1:exon
so has part: feature:58228-58374:1:exon
so has part: feature:58723-59118:1:exon

XP_048146337.1
type: Protein
SIO_000068: ncbiprotein

position:56278:1
position: 56278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56278-56426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56894-57129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57296-58144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58228-58374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58723-59118:1:exon

AGFG2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: AGFG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61026..63811
location: region:61026-63811:1
so has part: feature:61026-63811:1:exon
subclass of: SO_0000010

125319267
type: Gene
SIO_000068: ncbigene

position:61026:1
position: 61026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63811:1
position: 63811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61026-63811:1:exon

AGFG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: AGFG2
product: ArfGAP with FG repeats 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290388.1
SIO_010081: AGFG2
subclass of: SO_0000673
so part of: AGFG2
location: join(61026..61258,61548..61641,61722..61837,61922..62019,62051..62212,62330..62443,62895..62943,63031..63074,63157..63228,63310..63369,63606..63811)
location: region:61026-63811:1
so has part: feature:61026-61258:1:exon
so has part: feature:61548-61641:1:exon
so has part: feature:61722-61837:1:exon
so has part: feature:61922-62019:1:exon
so has part: feature:62051-62212:1:exon
so has part: feature:62330-62443:1:exon
so has part: feature:62895-62943:1:exon
so has part: feature:63031-63074:1:exon
so has part: feature:63157-63228:1:exon
so has part: feature:63310-63369:1:exon
so has part: feature:63606-63811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61026-61258:1:exon

position:61258:1
position: 61258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61548-61641:1:exon

position:61548:1
position: 61548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61641:1
position: 61641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61722-61837:1:exon

position:61722:1
position: 61722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61837:1
position: 61837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61922-62019:1:exon

position:61922:1
position: 61922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62019:1
position: 62019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62051-62212:1:exon

position:62051:1
position: 62051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62212:1
position: 62212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62330-62443:1:exon

position:62330:1
position: 62330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62443:1
position: 62443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62895-62943:1:exon

position:62895:1
position: 62895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62943:1
position: 62943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63031-63074:1:exon

position:63031:1
position: 63031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63074:1
position: 63074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63157-63228:1:exon

position:63157:1
position: 63157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63228:1
position: 63228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63310-63369:1:exon

position:63310:1
position: 63310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63369:1
position: 63369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63606-63811:1:exon

position:63606:1
position: 63606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGFG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: AGFG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 2
translation: MAAGGGGAGPGAGPGGGPGARRGSANRDAEAEVWCRRVRELVSAVPANRLCFECGQRGVTYVDISVGSLVCTGCSGALRGLNPPHRVKSISMTTFTEAEVLFLQEHGNEACRRVWLGTFDPRTSLLPDSCDPQKLKEFLQEKYEKKRWYVAPEQVKAPQSNTAEPAPPPAPPWGHGDTATGGIPPPDLVVPPQPRQATHRPPQPAQKASTDLLADIGGDPFAGPAPGPAFAAFPGLAPPRSAFPGFDAFGTSPGAPAFGGAVPPFHTPPTTTGGGATSVLPTGGGASVSLFGTFRAPPALPYGGYTNPFTAPVTPRPSTNPFQSNGPGAAFTSPPVPGGFPSPFQADDGFDPNGPIRHQAPEHQPLPLTAAARGALGPSLTAPPDCGEPLPLRRD
SIO_010081: AGFG2
subclass of: SO_0000673
so part of: AGFG2
location: join(61026..61258,61548..61641,61722..61837,61922..62019,62051..62212,62330..62443,62895..62943,63031..63074,63157..63228,63310..63369,63606..63751)
location: region:61026-63751:1
so has part: feature:61026-61258:1:exon
so has part: feature:61548-61641:1:exon
so has part: feature:61722-61837:1:exon
so has part: feature:61922-62019:1:exon
so has part: feature:62051-62212:1:exon
so has part: feature:62330-62443:1:exon
so has part: feature:62895-62943:1:exon
so has part: feature:63031-63074:1:exon
so has part: feature:63157-63228:1:exon
so has part: feature:63310-63369:1:exon
so has part: feature:63606-63751:1:exon

XP_048146345.1
type: Protein
SIO_000068: ncbiprotein

position:63751:1
position: 63751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61026-61258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61548-61641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61722-61837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61922-62019:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62051-62212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62330-62443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62895-62943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63031-63074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63157-63228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63310-63369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63606-63751:1:exon

LRCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LRCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64569..>68834)
location: region:64569-68834:-1
so has part: feature:64569-68834:-1:exon
subclass of: SO_0000010

125319260
type: Gene
SIO_000068: ncbigene

position:64569:-1
position: 64569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68834:-1
position: 68834
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64569-68834:-1:exon

LRCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LRCH4
product: leucine rich repeats and calponin homology domain containing 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
transcript id: XM_048290381.1
SIO_010081: LRCH4
subclass of: SO_0000673
so part of: LRCH4
location: complement(join(64569..65107,65187..65249,65682..65774,65880..65926,66008..66104,66214..66253,66465..66542,66632..66678,66766..66812,66900..66957,67052..67149,67237..67310,67379..67515,67596..67701,67784..67910,67984..68129,68557..>68834))
location: region:64569-68834:-1
so has part: feature:68557-68834:-1:exon
so has part: feature:67984-68129:-1:exon
so has part: feature:67784-67910:-1:exon
so has part: feature:67596-67701:-1:exon
so has part: feature:67379-67515:-1:exon
so has part: feature:67237-67310:-1:exon
so has part: feature:67052-67149:-1:exon
so has part: feature:66900-66957:-1:exon
so has part: feature:66766-66812:-1:exon
so has part: feature:66632-66678:-1:exon
so has part: feature:66465-66542:-1:exon
so has part: feature:66214-66253:-1:exon
so has part: feature:66008-66104:-1:exon
so has part: feature:65880-65926:-1:exon
so has part: feature:65682-65774:-1:exon
so has part: feature:65187-65249:-1:exon
so has part: feature:64569-65107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68557-68834:-1:exon

position:68557:-1
position: 68557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67984-68129:-1:exon

position:67984:-1
position: 67984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68129:-1
position: 68129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67784-67910:-1:exon

position:67784:-1
position: 67784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67910:-1
position: 67910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67596-67701:-1:exon

position:67596:-1
position: 67596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67701:-1
position: 67701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67379-67515:-1:exon

position:67379:-1
position: 67379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67515:-1
position: 67515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67237-67310:-1:exon

position:67237:-1
position: 67237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67310:-1
position: 67310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67052-67149:-1:exon

position:67052:-1
position: 67052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67149:-1
position: 67149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66900-66957:-1:exon

position:66900:-1
position: 66900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66957:-1
position: 66957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66766-66812:-1:exon

position:66766:-1
position: 66766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66812:-1
position: 66812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:66632-66678:-1:exon

position:66632:-1
position: 66632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66678:-1
position: 66678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:66465-66542:-1:exon

position:66465:-1
position: 66465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66542:-1
position: 66542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:66214-66253:-1:exon

position:66214:-1
position: 66214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66253:-1
position: 66253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:66008-66104:-1:exon

position:66008:-1
position: 66008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66104:-1
position: 66104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:65880-65926:-1:exon

position:65880:-1
position: 65880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65926:-1
position: 65926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:65682-65774:-1:exon

position:65682:-1
position: 65682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65774:-1
position: 65774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:65187-65249:-1:exon

position:65187:-1
position: 65187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65249:-1
position: 65249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:64569-65107:-1:exon

position:65107:-1
position: 65107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LRCH4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat and calponin homology domain-containing protein 4
translation: PCGGVRKCPGLSRAAAAAASGAPGPPWPRGAVGAVTAELPPPPLGRLPGGAGTERALEEAEACGTLSLAGRRLRAFPAAAARRWDLSDTTQADLSRNRFGEVPEAACRLVSLEGLSLYHNCLRSVPPAIANLQALAHLDLSRNQLSSLPACLCLLPLRVLNASNNRLAQLPPNLGALRTLRQLDVGCNRLRALPPGLGQLRALRDLNVRRNQLSALPEELSELPLVRLDFSCNRVVAIPRCFRRLRHLQMLLADSNPLQFPPAHICLKGKVHIFKYLETEAAAHPPPACPPDEPCPLWPRGGLDSGFHSVDSGSKRWSGNESTDESSELSRQHREMRSGAAGDSDPEQLEEEPTPEEQQSQTPRGDTPEDIRGVPTSRRRPKNLEVWRERERKRSRDRSPTQRPPWTTTMPDPDRAPGPPSTPPKPSACLGPTSSSSCSAPKPAPPDPNQRELIAEMRQSLEALLQLRLPDELGDSELLGRVAARLRPWASPPSTRRTPQPFPCRRSGVPEVKPPRPRRTPPGLLFALFYGLLMALLVAAHRALFGC
SIO_010081: LRCH4
subclass of: SO_0000673
so part of: LRCH4
location: complement(join(64997..65107,65187..65249,65682..65774,65880..65926,66008..66104,66214..66253,66465..66542,66632..66678,66766..66812,66900..66957,67052..67149,67237..67310,67379..67515,67596..67701,67784..67910,67984..68129,68557..>68834))
location: region:64997-68834:-1
so has part: feature:68557-68834:-1:exon
so has part: feature:67984-68129:-1:exon
so has part: feature:67784-67910:-1:exon
so has part: feature:67596-67701:-1:exon
so has part: feature:67379-67515:-1:exon
so has part: feature:67237-67310:-1:exon
so has part: feature:67052-67149:-1:exon
so has part: feature:66900-66957:-1:exon
so has part: feature:66766-66812:-1:exon
so has part: feature:66632-66678:-1:exon
so has part: feature:66465-66542:-1:exon
so has part: feature:66214-66253:-1:exon
so has part: feature:66008-66104:-1:exon
so has part: feature:65880-65926:-1:exon
so has part: feature:65682-65774:-1:exon
so has part: feature:65187-65249:-1:exon
so has part: feature:64997-65107:-1:exon

XP_048146338.1
type: Protein
SIO_000068: ncbiprotein

position:64997:-1
position: 64997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68557-68834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67984-68129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67784-67910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67596-67701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67379-67515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67237-67310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67052-67149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66900-66957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66766-66812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66632-66678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:66465-66542:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:66214-66253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:66008-66104:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:65880-65926:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65682-65774:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65187-65249:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:64997-65107:-1:exon

PCOLCE
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PCOLCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(69510..74362)
location: region:69510-74362:-1
so has part: feature:69510-74362:-1:exon
subclass of: SO_0000010

125319275
type: Gene
SIO_000068: ncbigene

position:69510:-1
position: 69510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74362:-1
position: 74362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69510-74362:-1:exon

PCOLCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PCOLCE
product: procollagen C-endopeptidase enhancer
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon
transcript id: XM_048290394.1
SIO_010081: PCOLCE
subclass of: SO_0000673
so part of: PCOLCE
location: complement(join(69510..69745,69826..70001,70116..70386,70788..70924,71336..71460,72881..73139,73684..73801,74199..74362))
location: region:69510-74362:-1
so has part: feature:74199-74362:-1:exon
so has part: feature:73684-73801:-1:exon
so has part: feature:72881-73139:-1:exon
so has part: feature:71336-71460:-1:exon
so has part: feature:70788-70924:-1:exon
so has part: feature:70116-70386:-1:exon
so has part: feature:69826-70001:-1:exon
so has part: feature:69510-69745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74199-74362:-1:exon

position:74199:-1
position: 74199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73684-73801:-1:exon

position:73684:-1
position: 73684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73801:-1
position: 73801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:72881-73139:-1:exon

position:72881:-1
position: 72881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73139:-1
position: 73139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71336-71460:-1:exon

position:71336:-1
position: 71336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71460:-1
position: 71460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70788-70924:-1:exon

position:70788:-1
position: 70788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70924:-1
position: 70924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70116-70386:-1:exon

position:70116:-1
position: 70116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70386:-1
position: 70386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69826-70001:-1:exon

position:69826:-1
position: 69826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70001:-1
position: 70001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69510-69745:-1:exon

position:69745:-1
position: 69745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCOLCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PCOLCE
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: procollagen C-endopeptidase enhancer 1
translation: MSRFGPPPLPLLLLGALGALSAPPAAGQDPAPSPQPSARSNASRPVFPVFPCGGDHRGESGFIASEGFPRHYPSGSNCTWTITVPEGQVATLSFRVFDLEPDPLCRFDALSVFGGHGPGAPLLGRFCGTFRPGALRAPQNRLRLHMESDGGTAGRGFLAWFSAGSPPTNEHQFCGGRLEKSQGSLNTPNWPEENYPPGISCSWHIVAPPDKVVELRFGKFDVEPDPHCRYDYVAVFEGGARDDARRLGRFCGEETPGPILSSSPELLVQFVSDLSVTADGFSATYILRDRGSAPETPPPKPRGGGKGKPPPQSQSGAPHDPPPQGPXCPQRCRRAGTLQSNFCSSDFVLTGTVKSVVAGVPPGAGLXAVVSVLSLYKSGGLGVPQPPRGTTLQLQLPCHLCPALKKGSSYVLMGRLGGDGGALLPPDAFVVPYRPQQQQVLGNLSKKPCRGTP
SIO_010081: PCOLCE
subclass of: SO_0000673
so part of: PCOLCE
location: complement(join(69603..69745,69826..70001,70116..70386,70788..70924,71336..71460,72881..73139,73684..73801,74199..74329))
location: region:69603-74329:-1
so has part: feature:74199-74329:-1:exon
so has part: feature:73684-73801:-1:exon
so has part: feature:72881-73139:-1:exon
so has part: feature:71336-71460:-1:exon
so has part: feature:70788-70924:-1:exon
so has part: feature:70116-70386:-1:exon
so has part: feature:69826-70001:-1:exon
so has part: feature:69603-69745:-1:exon

XP_048146351.1
type: Protein
SIO_000068: ncbiprotein

position:69603:-1
position: 69603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74329:-1
position: 74329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74199-74329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73684-73801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72881-73139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71336-71460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70788-70924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70116-70386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69826-70001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69603-69745:-1:exon

KIF1C
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: KIF1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74975..105318)
location: region:74975-105318:-1
so has part: feature:74975-105318:-1:exon
subclass of: SO_0000010

125319274
type: Gene
SIO_000068: ncbigene

position:74975:-1
position: 74975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105318:-1
position: 105318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74975-105318:-1:exon

KIF1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: KIF1C
product: kinesin family member 1C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048290393.1
SIO_010081: KIF1C
subclass of: SO_0000673
so part of: KIF1C
location: complement(join(74975..75540,75809..76421,76760..76817,76902..77049,77328..77411,77695..77789,77883..77962,78051..78126,78361..78440,78552..78664,79096..79217,79316..79394,79471..79546,79670..79735,79828..79905,80475..80586,80670..80848,81256..81321,81406..81585,81655..81731,81981..82104,96420..96528,98788..98894,105078..105318))
location: region:74975-105318:-1
so has part: feature:105078-105318:-1:exon
so has part: feature:98788-98894:-1:exon
so has part: feature:96420-96528:-1:exon
so has part: feature:81981-82104:-1:exon
so has part: feature:81655-81731:-1:exon
so has part: feature:81406-81585:-1:exon
so has part: feature:81256-81321:-1:exon
so has part: feature:80670-80848:-1:exon
so has part: feature:80475-80586:-1:exon
so has part: feature:79828-79905:-1:exon
so has part: feature:79670-79735:-1:exon
so has part: feature:79471-79546:-1:exon
so has part: feature:79316-79394:-1:exon
so has part: feature:79096-79217:-1:exon
so has part: feature:78552-78664:-1:exon
so has part: feature:78361-78440:-1:exon
so has part: feature:78051-78126:-1:exon
so has part: feature:77883-77962:-1:exon
so has part: feature:77695-77789:-1:exon
so has part: feature:77328-77411:-1:exon
so has part: feature:76902-77049:-1:exon
so has part: feature:76760-76817:-1:exon
so has part: feature:75809-76421:-1:exon
so has part: feature:74975-75540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105078-105318:-1:exon

position:105078:-1
position: 105078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98788-98894:-1:exon

position:98788:-1
position: 98788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98894:-1
position: 98894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96420-96528:-1:exon

position:96420:-1
position: 96420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96528:-1
position: 96528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81981-82104:-1:exon

position:81981:-1
position: 81981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82104:-1
position: 82104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81655-81731:-1:exon

position:81655:-1
position: 81655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81731:-1
position: 81731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81406-81585:-1:exon

position:81406:-1
position: 81406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81585:-1
position: 81585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81256-81321:-1:exon

position:81256:-1
position: 81256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81321:-1
position: 81321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80670-80848:-1:exon

position:80670:-1
position: 80670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80848:-1
position: 80848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:80475-80586:-1:exon

position:80475:-1
position: 80475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80586:-1
position: 80586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79828-79905:-1:exon

position:79828:-1
position: 79828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79905:-1
position: 79905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:79670-79735:-1:exon

position:79670:-1
position: 79670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79735:-1
position: 79735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:79471-79546:-1:exon

position:79471:-1
position: 79471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79546:-1
position: 79546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:79316-79394:-1:exon

position:79316:-1
position: 79316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79394:-1
position: 79394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:79096-79217:-1:exon

position:79096:-1
position: 79096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79217:-1
position: 79217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:78552-78664:-1:exon

position:78552:-1
position: 78552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78664:-1
position: 78664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:78361-78440:-1:exon

position:78361:-1
position: 78361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78440:-1
position: 78440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:78051-78126:-1:exon

position:78051:-1
position: 78051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78126:-1
position: 78126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:77883-77962:-1:exon

position:77883:-1
position: 77883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77962:-1
position: 77962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:77695-77789:-1:exon

position:77695:-1
position: 77695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77789:-1
position: 77789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:77328-77411:-1:exon

position:77328:-1
position: 77328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77411:-1
position: 77411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:76902-77049:-1:exon

position:76902:-1
position: 76902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77049:-1
position: 77049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:76760-76817:-1:exon

position:76760:-1
position: 76760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76817:-1
position: 76817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:75809-76421:-1:exon

position:75809:-1
position: 75809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76421:-1
position: 76421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:74975-75540:-1:exon

position:75540:-1
position: 75540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: KIF1C
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: kinesin-like protein KIF1C
translation: MGMRATTWAKAGLWCKLAQSYSWGVMVSHRSGETEDTFISDLVVGLCAGQGDAVTGMAGASVKVAVRVRPFSARESSRQAKCVIQMQGNTTCITNPKLPKDATKHFTFDYSYWSHTSEEDPNFASQRRVYQDIGEEMLAHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQRGIIPQLCEDLFTRVAQEGSPELSFSVEVSYLEIYCERVRDLLNPKSRGGLRVREHPLLGPYVQDLSRLAVASFADIADLMDSGNKARTVAATNMNETSSRSHAVFTIVFSQRRRDPLSDLTTEKVSRISLVDLAGSERADASGTKGIRLKEGANINKSLTTLGKVISALAEVTSKKKKPDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADSNYEETLSTLRYADRTKQIRCHAVINEDPNARLIRELREEVTRLRELLSAQGLPDTTLSAPPATTPPTLNGGPGLEPPLGPTEAMERLQETEKIIAELNETWEEKLRRTEALRLEREALLAEMGVALREDGGTVGVFSPKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLSGPFIREQHCLFRSRPDPSGEVVVTLEPCEGAETYVNGKQVTEPVVLKSGHRLILGKNHXHPEQARRERERXGVPGPPPDWNLAQRELLEQQGIDMRLQRLQDLENQPQLEKEVMEQPQPPATDEPRCYEAGWRLISSLRQALPAPTVRSVLRRAGLPLPAPGKRREPLRVYQIPQRRRXDPRPRPPRRRPLWVTMADLKAQAVRELSLEVALREPRPARRELEALSLAKLQELCRRHGKREPTERDGWRAVARDVWDAVGGGEEEEGCGSGEQVSEVEGLRLHLDRLAGILREVKRQNSAKDEQIRALRDRVGQMERVIPLPLDDGDEAEPPPQEPSQDPPRPSTDGGSRPPSPPLSAAARLCRLMEQDPAFRRGRLRWLRQEQARLMAGGPQPPQAPRRPPASTRPPQDSKLRFPFKSNPQHRLAWGGGGESPQAENSPPPAAPSLGASPPRIPGRGVPGPRRGHAPHPVSAASARLPT
SIO_010081: KIF1C
subclass of: SO_0000673
so part of: KIF1C
location: complement(join(75065..75540,75809..76421,76760..76817,76902..77049,77328..77411,77695..77789,77883..77962,78051..78126,78361..78440,78552..78664,79096..79217,79316..79394,79471..79546,79670..79735,79828..79905,80475..80586,80670..80848,81256..81321,81406..81585,81655..81731,81981..82104,96420..96528,98788..98828))
location: region:75065-98828:-1
so has part: feature:98788-98828:-1:exon
so has part: feature:96420-96528:-1:exon
so has part: feature:81981-82104:-1:exon
so has part: feature:81655-81731:-1:exon
so has part: feature:81406-81585:-1:exon
so has part: feature:81256-81321:-1:exon
so has part: feature:80670-80848:-1:exon
so has part: feature:80475-80586:-1:exon
so has part: feature:79828-79905:-1:exon
so has part: feature:79670-79735:-1:exon
so has part: feature:79471-79546:-1:exon
so has part: feature:79316-79394:-1:exon
so has part: feature:79096-79217:-1:exon
so has part: feature:78552-78664:-1:exon
so has part: feature:78361-78440:-1:exon
so has part: feature:78051-78126:-1:exon
so has part: feature:77883-77962:-1:exon
so has part: feature:77695-77789:-1:exon
so has part: feature:77328-77411:-1:exon
so has part: feature:76902-77049:-1:exon
so has part: feature:76760-76817:-1:exon
so has part: feature:75809-76421:-1:exon
so has part: feature:75065-75540:-1:exon

XP_048146350.1
type: Protein
SIO_000068: ncbiprotein

position:75065:-1
position: 75065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98828:-1
position: 98828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98788-98828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96420-96528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81981-82104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81655-81731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81406-81585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81256-81321:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80670-80848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80475-80586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79828-79905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79670-79735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:79471-79546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79316-79394:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:79096-79217:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:78552-78664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78361-78440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78051-78126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77883-77962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77695-77789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77328-77411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76902-77049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76760-76817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:75809-76421:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:75065-75540:-1:exon

CAMTA2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84911..93339
location: region:84911-93339:1
so has part: feature:84911-93339:1:exon
subclass of: SO_0000010

125319273
type: Gene
SIO_000068: ncbigene

position:84911:1
position: 84911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93339:1
position: 93339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84911-93339:1:exon

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CAMTA2
product: calmodulin binding transcription activator 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
transcript id: XM_048290392.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: join(84911..85007,85082..85182,85530..85597,85678..85813,86335..86406,86484..86673,87124..87264,87734..88459,88556..88679,88760..88897,89110..89234,89444..89643,89812..89890,90079..90313,90803..90972,91045..91265,91619..91824,91923..91994,92096..92116,92397..92699,92947..93339)
location: region:84911-93339:1
so has part: feature:84911-85007:1:exon
so has part: feature:85082-85182:1:exon
so has part: feature:85530-85597:1:exon
so has part: feature:85678-85813:1:exon
so has part: feature:86335-86406:1:exon
so has part: feature:86484-86673:1:exon
so has part: feature:87124-87264:1:exon
so has part: feature:87734-88459:1:exon
so has part: feature:88556-88679:1:exon
so has part: feature:88760-88897:1:exon
so has part: feature:89110-89234:1:exon
so has part: feature:89444-89643:1:exon
so has part: feature:89812-89890:1:exon
so has part: feature:90079-90313:1:exon
so has part: feature:90803-90972:1:exon
so has part: feature:91045-91265:1:exon
so has part: feature:91619-91824:1:exon
so has part: feature:91923-91994:1:exon
so has part: feature:92096-92116:1:exon
so has part: feature:92397-92699:1:exon
so has part: feature:92947-93339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84911-85007:1:exon

position:85007:1
position: 85007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85082-85182:1:exon

position:85082:1
position: 85082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85182:1
position: 85182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85530-85597:1:exon

position:85530:1
position: 85530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85597:1
position: 85597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85678-85813:1:exon

position:85678:1
position: 85678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85813:1
position: 85813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86335-86406:1:exon

position:86335:1
position: 86335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86406:1
position: 86406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86484-86673:1:exon

position:86484:1
position: 86484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86673:1
position: 86673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:87124-87264:1:exon

position:87124:1
position: 87124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87264:1
position: 87264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87734-88459:1:exon

position:87734:1
position: 87734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88459:1
position: 88459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:88556-88679:1:exon

position:88556:1
position: 88556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88679:1
position: 88679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:88760-88897:1:exon

position:88760:1
position: 88760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88897:1
position: 88897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:89110-89234:1:exon

position:89110:1
position: 89110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89234:1
position: 89234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:89444-89643:1:exon

position:89444:1
position: 89444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89643:1
position: 89643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:89812-89890:1:exon

position:89812:1
position: 89812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89890:1
position: 89890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:90079-90313:1:exon

position:90079:1
position: 90079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90313:1
position: 90313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:90803-90972:1:exon

position:90803:1
position: 90803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90972:1
position: 90972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:91045-91265:1:exon

position:91045:1
position: 91045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91265:1
position: 91265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:91619-91824:1:exon

position:91619:1
position: 91619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91824:1
position: 91824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:91923-91994:1:exon

position:91923:1
position: 91923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91994:1
position: 91994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:92096-92116:1:exon

position:92096:1
position: 92096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92116:1
position: 92116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:92397-92699:1:exon

position:92397:1
position: 92397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92699:1
position: 92699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:92947-93339:1:exon

position:92947:1
position: 92947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CAMTA2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:92556..92558,aa:OTHER)
product: LOW QUALITY PROTEIN: calmodulin-binding transcription activator 2
translation: MSSKDPPEVSERSHLKVFLPRKLVECLPKCPVLPKEQLRWNTNEEIASYLITFEKHDEWLSCSPKTRPQNGSVILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPQLCSPPLCAGAPPICAATADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAPPGLSLEQLVQHILERHQARPPPRTHACLCAGGLGTPGHKCGSTKHRIISPKVERGGGGGAPGDAPKPAPSSPDTTQPSPGLGGGTAPPEGPRAPSLPPARGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPPPPAAPPKLEEEEEEEKEEEEEEKEGVKQGTVPHDPLSAAPLPQPPFPHPFPELLTGDAGVPPNPREAPHAPHLPSSPPAPPSDSPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLLPPRGAPSETRPEQGPGSSFEARVVAICEAMMARPGWPGTSPGTSGTSMLAHGVTFRGMTLLHLAAAQGYASLVEALRRWRMLAADSLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQVSPTSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPSEDESWGVAVPPSPPEDALAPPSDTLQAEVVTLARQIIEATPERIKQEAPGGPPGALGALGSAGGTLGTPGPAGPAGLGAAMAWLATYLESVDRPPAPPHRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQLTWIALKFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRCTEGHXGALGTRGTGDREVLTLRSISPRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: join(84977..85007,85082..85182,85530..85597,85678..85813,86335..86406,86484..86673,87124..87264,87734..88459,88556..88679,88760..88897,89110..89234,89444..89643,89812..89890,90079..90313,90803..90972,91045..91265,91619..91824,91923..91994,92096..92116,92397..92699,92947..93010)
location: region:84977-93010:1
so has part: feature:84977-85007:1:exon
so has part: feature:85082-85182:1:exon
so has part: feature:85530-85597:1:exon
so has part: feature:85678-85813:1:exon
so has part: feature:86335-86406:1:exon
so has part: feature:86484-86673:1:exon
so has part: feature:87124-87264:1:exon
so has part: feature:87734-88459:1:exon
so has part: feature:88556-88679:1:exon
so has part: feature:88760-88897:1:exon
so has part: feature:89110-89234:1:exon
so has part: feature:89444-89643:1:exon
so has part: feature:89812-89890:1:exon
so has part: feature:90079-90313:1:exon
so has part: feature:90803-90972:1:exon
so has part: feature:91045-91265:1:exon
so has part: feature:91619-91824:1:exon
so has part: feature:91923-91994:1:exon
so has part: feature:92096-92116:1:exon
so has part: feature:92397-92699:1:exon
so has part: feature:92947-93010:1:exon

XP_048146349.1
type: Protein
SIO_000068: ncbiprotein

position:84977:1
position: 84977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93010:1
position: 93010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84977-85007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85082-85182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85530-85597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85678-85813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86335-86406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86484-86673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87124-87264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87734-88459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88556-88679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88760-88897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89110-89234:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:89444-89643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:89812-89890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90079-90313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90803-90972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91045-91265:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91619-91824:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:91923-91994:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92096-92116:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:92397-92699:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:92947-93010:1:exon

SPAG7
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SPAG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93550..95742
location: region:93550-95742:1
so has part: feature:93550-95742:1:exon
subclass of: SO_0000010

125319277
type: Gene
SIO_000068: ncbigene

position:93550:1
position: 93550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95742:1
position: 95742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93550-95742:1:exon

SPAG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SPAG7
product: sperm associated antigen 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290396.1
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: join(93550..93715,94085..94152,94249..94337,94708..94792,94868..94957,95149..95305,95511..95742)
location: region:93550-95742:1
so has part: feature:93550-93715:1:exon
so has part: feature:94085-94152:1:exon
so has part: feature:94249-94337:1:exon
so has part: feature:94708-94792:1:exon
so has part: feature:94868-94957:1:exon
so has part: feature:95149-95305:1:exon
so has part: feature:95511-95742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93550-93715:1:exon

position:93715:1
position: 93715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94085-94152:1:exon

position:94085:1
position: 94085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94152:1
position: 94152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94249-94337:1:exon

position:94249:1
position: 94249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94337:1
position: 94337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94708-94792:1:exon

position:94708:1
position: 94708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94792:1
position: 94792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94868-94957:1:exon

position:94868:1
position: 94868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94957:1
position: 94957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95149-95305:1:exon

position:95149:1
position: 95149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95305:1
position: 95305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:95511-95742:1:exon

position:95511:1
position: 95511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPAG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SPAG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 7
translation: MTQDAGAAARARRHASPRRKMAELDLLGSILSSMERPPAAADGETRRRAREQAARMKKLQEQEKRQKVEFRKRMEQEVSQFIQATGEPRRRFQPMNKIERSILHDVAEVAGLTSFSFGDDEDSRYVMVFKKEFAPSDEELDAYRRGEEWDPARAEERRRLRELAAQQEEAELERGPAPPGPPNDYKDKYRHLIGSDAAKAAARTMEANKAYGCVPVANKRDTRSIEEAMNEIRAKKRLRQAEDEGGAGGGPGGPSV
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: join(93565..93715,94085..94152,94249..94337,94708..94792,94868..94957,95149..95305,95511..95641)
location: region:93565-95641:1
so has part: feature:93565-93715:1:exon
so has part: feature:94085-94152:1:exon
so has part: feature:94249-94337:1:exon
so has part: feature:94708-94792:1:exon
so has part: feature:94868-94957:1:exon
so has part: feature:95149-95305:1:exon
so has part: feature:95511-95641:1:exon

XP_048146353.1
type: Protein
SIO_000068: ncbiprotein

position:93565:1
position: 93565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95641:1
position: 95641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93565-93715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94085-94152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94249-94337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94708-94792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94868-94957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95149-95305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95511-95641:1:exon

PFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100882..103468
location: region:100882-103468:1
so has part: feature:100882-103468:1:exon
subclass of: SO_0000010

125319279
type: Gene
SIO_000068: ncbigene

position:100882:1
position: 100882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103468:1
position: 103468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100882-103468:1:exon

PFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PFN1
product: profilin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290399.1
SIO_010081: PFN1
subclass of: SO_0000673
so part of: PFN1
location: join(100882..101048,102454..102646,103215..103468)
location: region:100882-103468:1
so has part: feature:100882-101048:1:exon
so has part: feature:102454-102646:1:exon
so has part: feature:103215-103468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100882-101048:1:exon

position:101048:1
position: 101048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102454-102646:1:exon

position:102454:1
position: 102454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102646:1
position: 102646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103215-103468:1:exon

position:103215:1
position: 103215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-1
translation: MSGWAPYVETLLADGTCQDAAIVGYRDTPAVWAAAPGKTFANITPAEVAALVGPERGPLLVQGLTLGGLRCSVIRDSLLVEGEHSMDLRTKGAAGAPTFNITAAITNKTIVLAMGKEGVHGGCVNKKCYEMANHLRRSQY
SIO_010081: PFN1
subclass of: SO_0000673
so part of: PFN1
location: join(100917..101048,102454..102646,103215..103312)
location: region:100917-103312:1
so has part: feature:100917-101048:1:exon
so has part: feature:102454-102646:1:exon
so has part: feature:103215-103312:1:exon

XP_048146356.1
type: Protein
SIO_000068: ncbiprotein

position:100917:1
position: 100917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103312:1
position: 103312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100917-101048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102454-102646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103215-103312:1:exon

SLC25A11
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SLC25A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 105463..108757
location: region:105463-108757:1
so has part: feature:105463-108757:1:exon
subclass of: SO_0000010

125319276
type: Gene
SIO_000068: ncbigene

position:105463:1
position: 105463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108757:1
position: 108757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105463-108757:1:exon

SLC25A11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC25A11
product: solute carrier family 25 member 11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290395.1
SIO_010081: SLC25A11
subclass of: SO_0000673
so part of: SLC25A11
location: join(105463..105626,106143..106295,106539..106745,106848..106938,107191..107281,107373..107472,107586..107637,108057..108757)
location: region:105463-108757:1
so has part: feature:105463-105626:1:exon
so has part: feature:106143-106295:1:exon
so has part: feature:106539-106745:1:exon
so has part: feature:106848-106938:1:exon
so has part: feature:107191-107281:1:exon
so has part: feature:107373-107472:1:exon
so has part: feature:107586-107637:1:exon
so has part: feature:108057-108757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105463-105626:1:exon

position:105626:1
position: 105626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106143-106295:1:exon

position:106143:1
position: 106143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106295:1
position: 106295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106539-106745:1:exon

position:106539:1
position: 106539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106745:1
position: 106745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106848-106938:1:exon

position:106848:1
position: 106848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106938:1
position: 106938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107191-107281:1:exon

position:107191:1
position: 107191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107281:1
position: 107281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107373-107472:1:exon

position:107373:1
position: 107373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107472:1
position: 107472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107586-107637:1:exon

position:107586:1
position: 107586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107637:1
position: 107637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108057-108757:1:exon

position:108057:1
position: 108057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC25A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxoglutarate/malate carrier protein
translation: MAAAPAAERPKTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGAGAKGREYRTSLHALGSILRHEGLRGIYTGLSAGLLRQATYTTTRLGIYSVLLERFGGADGTPPPFLAKAAMGMTAGAAGAFVGTPAEVALIRMTADGRLPPGERRGYRNVFDALVRMAREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGHFRDDILCHFCASMISGLVTTAASMPVDIVKTRIQNMRTIDGKPEYRNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKWYQRLFLSA
SIO_010081: SLC25A11
subclass of: SO_0000673
so part of: SLC25A11
location: join(105550..105626,106143..106295,106539..106745,106848..106938,107191..107281,107373..107472,107586..107637,108057..108212)
location: region:105550-108212:1
so has part: feature:105550-105626:1:exon
so has part: feature:106143-106295:1:exon
so has part: feature:106539-106745:1:exon
so has part: feature:106848-106938:1:exon
so has part: feature:107191-107281:1:exon
so has part: feature:107373-107472:1:exon
so has part: feature:107586-107637:1:exon
so has part: feature:108057-108212:1:exon

XP_048146352.1
type: Protein
SIO_000068: ncbiprotein

position:105550:1
position: 105550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108212:1
position: 108212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105550-105626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106143-106295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106539-106745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106848-106938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107191-107281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107373-107472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107586-107637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108057-108212:1:exon

PSMB6
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PSMB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108878..111771)
location: region:108878-111771:-1
so has part: feature:108878-111771:-1:exon
subclass of: SO_0000010

125319278
type: Gene
SIO_000068: ncbigene

position:108878:-1
position: 108878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111771:-1
position: 111771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108878-111771:-1:exon

PSMB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PSMB6
product: proteasome 20S subunit beta 6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048290398.1
SIO_010081: PSMB6
subclass of: SO_0000673
so part of: PSMB6
location: complement(join(108878..109084,109383..109527,109832..109961,110041..110172,111097..111164,111585..111771))
location: region:108878-111771:-1
so has part: feature:111585-111771:-1:exon
so has part: feature:111097-111164:-1:exon
so has part: feature:110041-110172:-1:exon
so has part: feature:109832-109961:-1:exon
so has part: feature:109383-109527:-1:exon
so has part: feature:108878-109084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111585-111771:-1:exon

position:111585:-1
position: 111585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111097-111164:-1:exon

position:111097:-1
position: 111097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111164:-1
position: 111164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110041-110172:-1:exon

position:110041:-1
position: 110041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110172:-1
position: 110172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109832-109961:-1:exon

position:109832:-1
position: 109832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109961:-1
position: 109961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109383-109527:-1:exon

position:109383:-1
position: 109383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109527:-1
position: 109527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108878-109084:-1:exon

position:109084:-1
position: 109084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PSMB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-6
translation: MAAVTVWEPRAASGPAGLHREWTAEPVSTGTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTPVHDRIFCCRSGSAADTQAVADAVAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGIIVAGWDPRRGGQVYMVPMGGLLLRQPFAVGGSGSSYIYGFLDATFRSGMSRSQCQEFVARALALAMVRDGSSGGVIRLAAITEEGVERTVLAGSDLPWGDGGPPV
SIO_010081: PSMB6
subclass of: SO_0000673
so part of: PSMB6
location: complement(join(108948..109084,109383..109527,109832..109961,110041..110172,111097..111164,111585..111674))
location: region:108948-111674:-1
so has part: feature:111585-111674:-1:exon
so has part: feature:111097-111164:-1:exon
so has part: feature:110041-110172:-1:exon
so has part: feature:109832-109961:-1:exon
so has part: feature:109383-109527:-1:exon
so has part: feature:108948-109084:-1:exon

XP_048146355.1
type: Protein
SIO_000068: ncbiprotein

position:108948:-1
position: 108948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111674:-1
position: 111674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111585-111674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111097-111164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110041-110172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109832-109961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109383-109527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108948-109084:-1:exon

LOC125319280
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(112828..117792)
location: region:112828-117792:-1
so has part: feature:112828-117792:-1:exon
subclass of: SO_0000011

125319280
type: Gene
SIO_000068: ncbigene

position:112828:-1
position: 112828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117792:-1
position: 117792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112828-117792:-1:exon

LOC125319280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319280
product: uncharacterized LOC125319280, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007200644.1
SIO_010081: LOC125319280
subclass of: SO_0000673
so part of: LOC125319280
location: complement(join(112828..113035,113392..113809,113987..115257,115362..115646,115882..115923,116002..117078,117154..117233,117313..117480,117575..117792))
location: region:112828-117792:-1
so has part: feature:117575-117792:-1:exon
so has part: feature:117313-117480:-1:exon
so has part: feature:117154-117233:-1:exon
so has part: feature:116002-117078:-1:exon
so has part: feature:115882-115923:-1:exon
so has part: feature:115362-115646:-1:exon
so has part: feature:113987-115257:-1:exon
so has part: feature:113392-113809:-1:exon
so has part: feature:112828-113035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117575-117792:-1:exon

position:117575:-1
position: 117575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117313-117480:-1:exon

position:117313:-1
position: 117313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117480:-1
position: 117480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117154-117233:-1:exon

position:117154:-1
position: 117154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117233:-1
position: 117233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116002-117078:-1:exon

position:116002:-1
position: 116002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117078:-1
position: 117078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115882-115923:-1:exon

position:115882:-1
position: 115882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115923:-1
position: 115923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115362-115646:-1:exon

position:115362:-1
position: 115362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115646:-1
position: 115646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113987-115257:-1:exon

position:113987:-1
position: 113987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115257:-1
position: 115257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113392-113809:-1:exon

position:113392:-1
position: 113392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113809:-1
position: 113809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112828-113035:-1:exon

position:113035:-1
position: 113035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125319280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319280
product: uncharacterized LOC125319280, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200646.1
SIO_010081: LOC125319280
subclass of: SO_0000673
so part of: LOC125319280
location: complement(join(113246..113809,113987..114150,114353..115257,115362..115646,115882..115923,116002..117078,117154..117233,117313..117480,117575..117792))
location: region:113246-117792:-1
so has part: feature:117575-117792:-1:exon
so has part: feature:117313-117480:-1:exon
so has part: feature:117154-117233:-1:exon
so has part: feature:116002-117078:-1:exon
so has part: feature:115882-115923:-1:exon
so has part: feature:115362-115646:-1:exon
so has part: feature:114353-115257:-1:exon
so has part: feature:113987-114150:-1:exon
so has part: feature:113246-113809:-1:exon

position:113246:-1
position: 113246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117575-117792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117313-117480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117154-117233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116002-117078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115882-115923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115362-115646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114353-115257:-1:exon

position:114353:-1
position: 114353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113987-114150:-1:exon

position:114150:-1
position: 114150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113246-113809:-1:exon

LOC125319280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319280
product: uncharacterized LOC125319280, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200643.1
SIO_010081: LOC125319280
subclass of: SO_0000673
so part of: LOC125319280
location: complement(join(113246..113809,113987..115257,115362..115646,115882..115923,116002..117078,117154..117233,117313..117480,117575..117792))
location: region:113246-117792:-1
so has part: feature:117575-117792:-1:exon
so has part: feature:117313-117480:-1:exon
so has part: feature:117154-117233:-1:exon
so has part: feature:116002-117078:-1:exon
so has part: feature:115882-115923:-1:exon
so has part: feature:115362-115646:-1:exon
so has part: feature:113987-115257:-1:exon
so has part: feature:113246-113809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117575-117792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117313-117480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117154-117233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116002-117078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115882-115923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115362-115646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113987-115257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113246-113809:-1:exon

LOC125319280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319280
product: uncharacterized LOC125319280, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200645.1
SIO_010081: LOC125319280
subclass of: SO_0000673
so part of: LOC125319280
location: complement(join(113246..113809,113987..115285,115362..115646,115882..115923,116002..117078,117154..117233,117313..117480,117575..117792))
location: region:113246-117792:-1
so has part: feature:117575-117792:-1:exon
so has part: feature:117313-117480:-1:exon
so has part: feature:117154-117233:-1:exon
so has part: feature:116002-117078:-1:exon
so has part: feature:115882-115923:-1:exon
so has part: feature:115362-115646:-1:exon
so has part: feature:113987-115285:-1:exon
so has part: feature:113246-113809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117575-117792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117313-117480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117154-117233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116002-117078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115882-115923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115362-115646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113987-115285:-1:exon

position:115285:-1
position: 115285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113246-113809:-1:exon

LOC125319270
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124509..132838
location: region:124509-132838:1
so has part: feature:124509-132838:1:exon
subclass of: SO_0000011

125319270
type: Gene
SIO_000068: ncbigene

position:124509:1
position: 124509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132838:1
position: 132838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124509-132838:1:exon

LOC125319270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319270
product: uncharacterized LOC125319270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007200640.1
SIO_010081: LOC125319270
subclass of: SO_0000673
so part of: LOC125319270
location: join(124509..124543,124621..125301,127075..127116,127211..127524,131270..132312,132391..132432,132519..132679,132794..132838)
location: region:124509-132838:1
so has part: feature:124509-124543:1:exon
so has part: feature:124621-125301:1:exon
so has part: feature:127075-127116:1:exon
so has part: feature:127211-127524:1:exon
so has part: feature:131270-132312:1:exon
so has part: feature:132391-132432:1:exon
so has part: feature:132519-132679:1:exon
so has part: feature:132794-132838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124509-124543:1:exon

position:124543:1
position: 124543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124621-125301:1:exon

position:124621:1
position: 124621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125301:1
position: 125301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127075-127116:1:exon

position:127075:1
position: 127075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127116:1
position: 127116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127211-127524:1:exon

position:127211:1
position: 127211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127524:1
position: 127524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131270-132312:1:exon

position:131270:1
position: 131270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132312:1
position: 132312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132391-132432:1:exon

position:132391:1
position: 132391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132432:1
position: 132432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132519-132679:1:exon

position:132519:1
position: 132519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132679:1
position: 132679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:132794-132838:1:exon

position:132794:1
position: 132794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319272
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125552..126522
location: region:125552-126522:1
so has part: feature:125552-126522:1:exon
subclass of: SO_0000011

125319272
type: Gene
SIO_000068: ncbigene

position:125552:1
position: 125552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126522:1
position: 126522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125552-126522:1:exon

LOC125319272
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319272
product: uncharacterized LOC125319272
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007200642.1
SIO_010081: LOC125319272
subclass of: SO_0000673
so part of: LOC125319272
location: join(125552..125674,125754..125833,125915..126522)
location: region:125552-126522:1
so has part: feature:125552-125674:1:exon
so has part: feature:125754-125833:1:exon
so has part: feature:125915-126522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125552-125674:1:exon

position:125674:1
position: 125674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125754-125833:1:exon

position:125754:1
position: 125754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125833:1
position: 125833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125915-126522:1:exon

position:125915:1
position: 125915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319271
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 129262..130341
location: region:129262-130341:1
so has part: feature:129262-130341:1:exon
subclass of: SO_0000011

125319271
type: Gene
SIO_000068: ncbigene

position:129262:1
position: 129262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130341:1
position: 130341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129262-130341:1:exon

LOC125319271
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319271
product: uncharacterized LOC125319271
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007200641.1
SIO_010081: LOC125319271
subclass of: SO_0000673
so part of: LOC125319271
location: join(129262..129334,129413..129454,129549..129628,129796..129875,129957..130341)
location: region:129262-130341:1
so has part: feature:129262-129334:1:exon
so has part: feature:129413-129454:1:exon
so has part: feature:129549-129628:1:exon
so has part: feature:129796-129875:1:exon
so has part: feature:129957-130341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129262-129334:1:exon

position:129334:1
position: 129334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129413-129454:1:exon

position:129413:1
position: 129413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129454:1
position: 129454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129549-129628:1:exon

position:129549:1
position: 129549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129628:1
position: 129628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129796-129875:1:exon

position:129796:1
position: 129796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129875:1
position: 129875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129957-130341:1:exon

position:129957:1
position: 129957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319269
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125319269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143325..155524
location: region:143325-155524:1
so has part: feature:143325-155524:1:exon
subclass of: SO_0000011

125319269
type: Gene
SIO_000068: ncbigene

position:143325:1
position: 143325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155524:1
position: 155524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143325-155524:1:exon

LOC125319269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319269
product: uncharacterized LOC125319269, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200639.1
SIO_010081: LOC125319269
subclass of: SO_0000673
so part of: LOC125319269
location: join(143325..143334,153251..154079,155236..155524)
location: region:143325-155524:1
so has part: feature:143325-143334:1:exon
so has part: feature:153251-154079:1:exon
so has part: feature:155236-155524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143325-143334:1:exon

position:143334:1
position: 143334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153251-154079:1:exon

position:153251:1
position: 153251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154079:1
position: 154079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155236-155524:1:exon

position:155236:1
position: 155236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125319269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125319269
product: uncharacterized LOC125319269, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007200638.1
SIO_010081: LOC125319269
subclass of: SO_0000673
so part of: LOC125319269
location: join(152502..154079,155236..155524)
location: region:152502-155524:1
so has part: feature:152502-154079:1:exon
so has part: feature:155236-155524:1:exon

position:152502:1
position: 152502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152502-154079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155236-155524:1:exon