Corvus hawaiiensis isolate bCorHaw1 chromosome 36, bCorHaw1.pri.cur, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM036381.1.\nAssembly name: bCorHaw1.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2021\nAssembly Method :: HiFiasm v. 0.15.4+galaxy; purge_dups v.\n 1.2.5+galaxy3; Bionano Solve v.\n 3.6.1+galaxy2; Salsa v. 2.3+galaxy0;\n gEVAL manual curation v. 2021-09-20; VGP\n pipeline v. 2.0\nAssembly Name :: bCorHaw1.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 29.61x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina NovaSeq;\n Bionano Genomics Saphyr DLS; Arima\n Genomics Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus hawaiiensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125319143, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125319143, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
steroid 21-hydroxylase-like, transcript variant X3
steroid 21-hydroxylase-like, transcript variant X2
steroid 21-hydroxylase-like, transcript variant X1
zinc finger MIZ-type containing 2, transcript variant X2
zinc finger MIZ-type containing 2, transcript variant X4
zinc finger MIZ-type containing 2, transcript variant X3
zinc finger MIZ-type containing 2, transcript variant X1
zinc finger MIZ domain-containing protein 2 isoform X3
zinc finger MIZ domain-containing protein 2 isoform X2
zinc finger MIZ domain-containing protein 2 isoform X1
2-oxoglutarate dehydrogenase, mitochondrial, transcript variant X3
2-oxoglutarate dehydrogenase, mitochondrial, transcript variant X1
2-oxoglutarate dehydrogenase, mitochondrial, transcript variant X4
2-oxoglutarate dehydrogenase, mitochondrial, transcript variant X2
2-oxoglutarate dehydrogenase, mitochondrial isoform X3
2-oxoglutarate dehydrogenase, mitochondrial isoform X1
2-oxoglutarate dehydrogenase, mitochondrial isoform X4
2-oxoglutarate dehydrogenase, mitochondrial isoform X2
interleukin-1 receptor antagonist protein-like, transcript variant X1
interleukin-1 receptor antagonist protein-like, transcript variant X3
interleukin-1 receptor antagonist protein-like, transcript variant X2
interleukin-1 receptor antagonist protein-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
cytosolic purine 5'-nucleotidase-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cytosolic purine 5'-nucleotidase-like, transcript variant X4
cytosolic purine 5'-nucleotidase-like, transcript variant X3
cytosolic purine 5'-nucleotidase-like, transcript variant X8
cytosolic purine 5'-nucleotidase-like, transcript variant X2
cytosolic purine 5'-nucleotidase-like isoform X5
cytosolic purine 5'-nucleotidase-like isoform X2
2-oxoglutarate dehydrogenase, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
2-oxoglutarate dehydrogenase, mitochondrial-like isoform X1
2-oxoglutarate dehydrogenase, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
2-oxoglutarate dehydrogenase, mitochondrial-like isoform X2
cytoskeleton-associated protein 2-like, transcript variant X3
cytoskeleton-associated protein 2-like, transcript variant X4
cytoskeleton-associated protein 2-like isoform X3
cytoskeleton-associated protein 2-like isoform X4
cytoskeleton-associated protein 2-like, transcript variant X2
cytoskeleton-associated protein 2-like, transcript variant X1
cytoskeleton-associated protein 2-like, transcript variant X5
cytoskeleton-associated protein 2-like isoform X1
cytoskeleton-associated protein 2-like isoform X5
cytoskeleton-associated protein 2-like isoform X2
cytosolic purine 5'-nucleotidase-like, transcript variant X7
cytosolic purine 5'-nucleotidase-like, transcript variant X1
cytosolic purine 5'-nucleotidase-like, transcript variant X6
cytosolic purine 5'-nucleotidase-like, transcript variant X9
cytosolic purine 5'-nucleotidase-like isoform X4
cytosolic purine 5'-nucleotidase-like isoform X1
cytosolic purine 5'-nucleotidase-like isoform X6
cytosolic purine 5'-nucleotidase-like isoform X3
sodium-dependent phosphate transporter 1
NudC domain containing 3, transcript variant X2
NudC domain containing 3, transcript variant X1
nudC domain-containing protein 3 isoform X2
nudC domain-containing protein 3 isoform X1
calcium/calmodulin dependent protein kinase II beta, transcript variant X1
calcium/calmodulin dependent protein kinase II beta, transcript variant X3
calcium/calmodulin dependent protein kinase II beta, transcript variant X2
calcium/calmodulin dependent protein kinase II beta, transcript variant X4
calcium/calmodulin dependent protein kinase II beta, transcript variant X5
calcium/calmodulin dependent protein kinase II beta, transcript variant X7
calcium/calmodulin dependent protein kinase II beta, transcript variant X6
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X3
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X2
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X4
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X5
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X7
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X6
calcium/calmodulin dependent protein kinase II beta, transcript variant X8
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X8
YKT6 v-SNARE homolog, transcript variant X2
YKT6 v-SNARE homolog, transcript variant X3
YKT6 v-SNARE homolog, transcript variant X5
YKT6 v-SNARE homolog, transcript variant X4
YKT6 v-SNARE homolog, transcript variant X1
uncharacterized LOC125319210, transcript variant X3
uncharacterized LOC125319210, transcript variant X2
uncharacterized LOC125319210, transcript variant X1
uncharacterized protein LOC125319210 isoform X2
uncharacterized protein LOC125319210 isoform X1
DNA polymerase delta 2, accessory subunit
AE binding protein 1, transcript variant X3
AE binding protein 1, transcript variant X2
AE binding protein 1, transcript variant X1
adipocyte enhancer-binding protein 1 isoform X2
adipocyte enhancer-binding protein 1 isoform X3
adipocyte enhancer-binding protein 1 isoform X1
capping actin protein, gelsolin like, transcript variant X4
capping actin protein, gelsolin like, transcript variant X3
capping actin protein, gelsolin like, transcript variant X2
capping actin protein, gelsolin like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
trans-Golgi network integral membrane protein 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ELMO domain-containing protein 3
glycerol-3-phosphate acyltransferase 2, mitochondrial
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: glycerol-3-phosphate acyltransferase 2, mitochondrial
fumarylacetoacetate hydrolase domain-containing protein 2-like
potassium voltage-gated channel interacting protein 3, transcript variant X2
potassium voltage-gated channel interacting protein 3, transcript variant X1
potassium voltage-gated channel interacting protein 3, transcript variant X6
potassium voltage-gated channel interacting protein 3, transcript variant X5
potassium voltage-gated channel interacting protein 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
potassium voltage-gated channel interacting protein 3, transcript variant X3
potassium voltage-gated channel interacting protein 3, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
potassium voltage-gated channel interacting protein 3, transcript variant X8
cytochrome c oxidase subunit 5B, mitochondrial
transcriptional activator protein Pur-beta
histone H2A.V-like, transcript variant X2
histone H2A.V-like, transcript variant X1
uncharacterized protein LOC125319208 isoform X1
vesicle-associated membrane protein 5-like, transcript variant X1
vesicle-associated membrane protein 5-like isoform X1
vesicle-associated membrane protein 5-like, transcript variant X2
vesicle-associated membrane protein 5-like isoform X2
surfactant protein B, transcript variant X1
surfactant protein B, transcript variant X2
pulmonary surfactant-associated protein B isoform X2
pulmonary surfactant-associated protein B isoform X1
MAX dimerization protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
MAX dimerization protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
MAX dimerization protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
small nuclear ribonucleoprotein U4/U6.U5 subunit 27, transcript variant X1
small nuclear ribonucleoprotein U4/U6.U5 subunit 27, transcript variant X2
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X2
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X1
folliculogenesis specific bHLH transcription factor
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 18% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: factor in the germline alpha
germ cell-less 1, spermatogenesis associated, transcript variant X1
germ cell-less 1, spermatogenesis associated, transcript variant X2
germ cell-less protein-like 1 isoform X1
germ cell-less protein-like 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: smad nuclear interacting protein 1-like
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
glutamine--fructose-6-phosphate transaminase 1, transcript variant X2
glutamine--fructose-6-phosphate transaminase 1, transcript variant X4
glutamine--fructose-6-phosphate transaminase 1, transcript variant X1
glutamine--fructose-6-phosphate transaminase 1, transcript variant X3
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X2
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X4
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X1
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
gastrokine-1-like, transcript variant X2
gastrokine-1-like, transcript variant X1
uncharacterized LOC125319131, transcript variant X4
uncharacterized LOC125319131, transcript variant X5
uncharacterized LOC125319131, transcript variant X9
uncharacterized LOC125319131, transcript variant X6
uncharacterized LOC125319131, transcript variant X11
uncharacterized LOC125319131, transcript variant X8
uncharacterized LOC125319131, transcript variant X2
uncharacterized LOC125319131, transcript variant X3
uncharacterized LOC125319131, transcript variant X1
uncharacterized LOC125319131, transcript variant X7
uncharacterized LOC125319131, transcript variant X10
uncharacterized protein LOC125319131 isoform X4
uncharacterized protein LOC125319131 isoform X5
uncharacterized protein LOC125319131 isoform X9
uncharacterized protein LOC125319131 isoform X6
uncharacterized protein LOC125319131 isoform X11
uncharacterized protein LOC125319131 isoform X10
uncharacterized protein LOC125319131 isoform X8
uncharacterized protein LOC125319131 isoform X2
uncharacterized protein LOC125319131 isoform X3
uncharacterized protein LOC125319131 isoform X1
uncharacterized protein LOC125319131 isoform X7
uncharacterized LOC125319131, transcript variant X16
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC125319131, transcript variant X15
uncharacterized LOC125319131, transcript variant X13
uncharacterized LOC125319131, transcript variant X12
uncharacterized protein LOC125319131 isoform X16
uncharacterized protein LOC125319131 isoform X15
uncharacterized protein LOC125319131 isoform X13
uncharacterized protein LOC125319131 isoform X12
uncharacterized LOC125319131, transcript variant X14
uncharacterized protein LOC125319131 isoform X14
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 230, transcript variant X1
transmembrane protein 230, transcript variant X2
uncharacterized LOC125319187, transcript variant X3
uncharacterized LOC125319187, transcript variant X1
uncharacterized LOC125319187, transcript variant X2
uncharacterized LOC125319187, transcript variant X4
solute carrier family 23 member 2, transcript variant X1
solute carrier family 23 member 2, transcript variant X3
solute carrier family 23 member 2, transcript variant X2
Ras association domain family member 2, transcript variant X3
Ras association domain family member 2, transcript variant X1
Ras association domain family member 2, transcript variant X2
ras association domain-containing protein 2 isoform X1
ras association domain-containing protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
RNA/RNP complex-1-interacting phosphatase
STAM binding protein, transcript variant X1
STAM binding protein, transcript variant X2
STAM binding protein, transcript variant X3
STAM binding protein, transcript variant X4
STAM binding protein, transcript variant X5
uncharacterized LOC125319113, transcript variant X1
uncharacterized LOC125319113, transcript variant X2
uncharacterized protein LOC125319113 isoform X1
uncharacterized protein LOC125319113 isoform X2
deoxyguanosine kinase, transcript variant X1
deoxyguanosine kinase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
deoxyguanosine kinase, mitochondrial isoform X1
deoxyguanosine kinase, mitochondrial isoform X3
deoxyguanosine kinase, transcript variant X2
deoxyguanosine kinase, mitochondrial isoform X2
tet methylcytosine dioxygenase 3, transcript variant X2
methylcytosine dioxygenase TET3 isoform X2
tet methylcytosine dioxygenase 3, transcript variant X3
tet methylcytosine dioxygenase 3, transcript variant X4
methylcytosine dioxygenase TET3 isoform X3
tet methylcytosine dioxygenase 3, transcript variant X1
methylcytosine dioxygenase TET3 isoform X1
tet methylcytosine dioxygenase 3, transcript variant X5
methylcytosine dioxygenase TET3 isoform X4
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial
solute carrier family 4 member 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
solute carrier family 4 member 5, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
solute carrier family 4 member 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
solute carrier family 4 member 5, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
electrogenic sodium bicarbonate cotransporter 4 isoform X2
electrogenic sodium bicarbonate cotransporter 4 isoform X1
electrogenic sodium bicarbonate cotransporter 4 isoform X5
electrogenic sodium bicarbonate cotransporter 4 isoform X4
solute carrier family 4 member 5, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
electrogenic sodium bicarbonate cotransporter 4 isoform X3
tetraspanin-15-like, transcript variant X2
tetraspanin-15-like, transcript variant X3
tetraspanin-15-like, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: condensin complex subunit 2
KAT8 regulatory NSL complex subunit 3, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3 isoform X5
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5A
KAT8 regulatory NSL complex subunit 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3 isoform X4
KAT8 regulatory NSL complex subunit 3 isoform X2
KAT8 regulatory NSL complex subunit 3 isoform X1
KAT8 regulatory NSL complex subunit 3 isoform X7
KAT8 regulatory NSL complex subunit 3, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3 isoform X6
KAT8 regulatory NSL complex subunit 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
KAT8 regulatory NSL complex subunit 3 isoform X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: fer-1-like protein 5
uncharacterized LOC125319126, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC125319126, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized LOC125319126, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
cyclin and CBS domain divalent metal cation transport mediator 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ankyrin repeat domain-containing protein 39
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
small nuclear ribonucleoprotein U5 subunit 200
LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase
cytosolic iron-sulfur assembly component 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: probable cytosolic iron-sulfur protein assembly protein CIAO1
transmembrane protein 127, transcript variant X39
transmembrane protein 127, transcript variant X44
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transmembrane protein 127, transcript variant X40
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transmembrane protein 127, transcript variant X43
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transmembrane protein 127, transcript variant X46
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transmembrane protein 127, transcript variant X48
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transmembrane protein 127, transcript variant X41
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transmembrane protein 127, transcript variant X42
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transmembrane protein 127, transcript variant X45
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transmembrane protein 127, transcript variant X47
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transmembrane protein 127, transcript variant X49
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transmembrane protein 127, transcript variant X36
transmembrane protein 127, transcript variant X35
transmembrane protein 127, transcript variant X16
transmembrane protein 127, transcript variant X17
transmembrane protein 127, transcript variant X1
transmembrane protein 127, transcript variant X20
transmembrane protein 127, transcript variant X27
transmembrane protein 127, transcript variant X37
transmembrane protein 127, transcript variant X24
transmembrane protein 127, transcript variant X28
transmembrane protein 127, transcript variant X32
transmembrane protein 127, transcript variant X30
transmembrane protein 127, transcript variant X33
transmembrane protein 127, transcript variant X31
transmembrane protein 127, transcript variant X23
transmembrane protein 127, transcript variant X26
transmembrane protein 127, transcript variant X29
transmembrane protein 127, transcript variant X25
transmembrane protein 127, transcript variant X18
transmembrane protein 127, transcript variant X15
transmembrane protein 127, transcript variant X5
transmembrane protein 127, transcript variant X6
transmembrane protein 127, transcript variant X7
transmembrane protein 127, transcript variant X2
transmembrane protein 127, transcript variant X3
transmembrane protein 127, transcript variant X4
transmembrane protein 127, transcript variant X10
transmembrane protein 127, transcript variant X8
transmembrane protein 127, transcript variant X12
transmembrane protein 127, transcript variant X9
transmembrane protein 127, transcript variant X11
transmembrane protein 127, transcript variant X13
transmembrane protein 127, transcript variant X14
transmembrane protein 127, transcript variant X38
transmembrane protein 127, transcript variant X34
transmembrane protein 127, transcript variant X19
transmembrane protein 127, transcript variant X21
transmembrane protein 127, transcript variant X22
StAR related lipid transfer domain containing 7
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: stAR-related lipid transfer protein 7, mitochondrial
uncharacterized LOC125319136, transcript variant X1
uncharacterized LOC125319136, transcript variant X2
family with sequence similarity 136 member A
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein polypeptide G, transcript variant X2
small nuclear ribonucleoprotein polypeptide G, transcript variant X3
small nuclear ribonucleoprotein polypeptide G, transcript variant X1
small nuclear ribonucleoprotein G isoform X1
small nuclear ribonucleoprotein G isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: prenylcysteine oxidase 1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
TIA1 cytotoxic granule associated RNA binding protein
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
LOW QUALITY PROTEIN: cytotoxic granule associated RNA binding protein TIA1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: 28S ribosomal protein S24, mitochondrial
NPC1 like intracellular cholesterol transporter 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
LOW QUALITY PROTEIN: NPC1-like intracellular cholesterol transporter 1
probable ATP-dependent RNA helicase DDX56
transmembrane emp24 domain-containing protein 4
interleukin-36 receptor antagonist protein-like, transcript variant X1
interleukin-36 receptor antagonist protein-like, transcript variant X2
interleukin-36 receptor antagonist protein-like isoform X1
interleukin-36 receptor antagonist protein-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns