Corvus hawaiiensis isolate bCorHaw1 chromosome 32, bCorHaw1.pri.cur, whole genome shotgun sequence.
type: Entry
definition: Corvus hawaiiensis isolate bCorHaw1 chromosome 32, bCorHaw1.pri.cur, whole genome shotgun sequence.
sequence version: NC_063244.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063244.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA838000
dblink: SAMN22550278
keyword: WGS
keyword: RefSeq
source: Corvus hawaiiensis (hawaiian crow)
organism: Corvus hawaiiensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036377.1.\nAssembly name: bCorHaw1.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2021\nAssembly Method :: HiFiasm v. 0.15.4+galaxy; purge_dups v.\n 1.2.5+galaxy3; Bionano Solve v.\n 3.6.1+galaxy2; Salsa v. 2.3+galaxy0;\n gEVAL manual curation v. 2021-09-20; VGP\n pipeline v. 2.0\nAssembly Name :: bCorHaw1.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 29.61x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina NovaSeq;\n Bionano Genomics Saphyr DLS; Arima\n Genomics Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus hawaiiensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 736907
topology: linear
so has quality: SO_0000987
location: 1..736907
location: region:1-736907:1
RO_0002162: 134902

NC_063244
type: RefSeq
SIO_000068: refseq

PRJNA838000
type: BioProject
SIO_000068: bioproject

SAMN22550278
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736907:1
position: 736907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-736907:1:source
so part of: sequence
organism: Corvus hawaiiensis
mol type: genomic DNA
isolate: bCorHaw1
chromosome: 32
sex: female
tissue type: blood
dev stage: adult
country: USA: University of Hawaii at Manoa
lat lon: 21.297467 N 157.818261 W
collection date: 2020-08-08
collected by: Bryce Masuda

134902
type: Taxonomy
SIO_000068: taxonomy

LOC125318941
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208685..211917)
location: region:208685-211917:-1
so has part: feature:208685-211917:-1:exon
subclass of: SO_0000011

125318941
type: Gene
SIO_000068: ncbigene

position:208685:-1
position: 208685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211917:-1
position: 211917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208685-211917:-1:exon

LOC125318941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125318941
product: uncharacterized LOC125318941, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007200542.1
SIO_010081: LOC125318941
subclass of: SO_0000673
so part of: LOC125318941
location: complement(join(208685..208773,208860..209183,209278..209563,211230..211764,211846..211917))
location: region:208685-211917:-1
so has part: feature:211846-211917:-1:exon
so has part: feature:211230-211764:-1:exon
so has part: feature:209278-209563:-1:exon
so has part: feature:208860-209183:-1:exon
so has part: feature:208685-208773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211846-211917:-1:exon

position:211846:-1
position: 211846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211230-211764:-1:exon

position:211230:-1
position: 211230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211764:-1
position: 211764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209278-209563:-1:exon

position:209278:-1
position: 209278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209563:-1
position: 209563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208860-209183:-1:exon

position:208860:-1
position: 208860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209183:-1
position: 209183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208685-208773:-1:exon

position:208773:-1
position: 208773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125318941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125318941
product: uncharacterized LOC125318941, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007200541.1
SIO_010081: LOC125318941
subclass of: SO_0000673
so part of: LOC125318941
location: complement(join(208685..208773,208860..209183,209278..209769))
location: region:208685-209769:-1
so has part: feature:209278-209769:-1:exon
so has part: feature:208860-209183:-1:exon
so has part: feature:208685-208773:-1:exon

position:209769:-1
position: 209769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209278-209769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208860-209183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208685-208773:-1:exon

LOC125318940
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209832..211098)
location: region:209832-211098:-1
so has part: feature:209832-211098:-1:exon
subclass of: SO_0000011

125318940
type: Gene
SIO_000068: ncbigene

position:209832:-1
position: 209832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211098:-1
position: 211098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209832-211098:-1:exon

LOC125318940
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125318940
product: uncharacterized LOC125318940, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007200539.1
SIO_010081: LOC125318940
subclass of: SO_0000673
so part of: LOC125318940
location: complement(join(209832..210439,210517..210596,210945..211098))
location: region:209832-211098:-1
so has part: feature:210945-211098:-1:exon
so has part: feature:210517-210596:-1:exon
so has part: feature:209832-210439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210945-211098:-1:exon

position:210945:-1
position: 210945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210517-210596:-1:exon

position:210517:-1
position: 210517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210596:-1
position: 210596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209832-210439:-1:exon

position:210439:-1
position: 210439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125318940
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125318940
product: uncharacterized LOC125318940, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_007200540.1
SIO_010081: LOC125318940
subclass of: SO_0000673
so part of: LOC125318940
location: complement(join(209832..210439,210517..210596,210721..210924))
location: region:209832-210924:-1
so has part: feature:210721-210924:-1:exon
so has part: feature:210517-210596:-1:exon
so has part: feature:209832-210439:-1:exon

position:210924:-1
position: 210924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210721-210924:-1:exon

position:210721:-1
position: 210721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210517-210596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209832-210439:-1:exon

SMARCA4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220190..244083
location: region:220190-244083:1
so has part: feature:220190-244083:1:exon
subclass of: SO_0000010

125318893
type: Gene
SIO_000068: ncbigene

position:220190:1
position: 220190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244083:1
position: 244083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220190-244083:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289823.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(220190..220339,221701..221778,223642..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,238719..238805,240092..240169,241228..241446,241812..242062,242239..242347,242426..242527,242679..242811,242931..243070,243486..244083)
location: region:220190-244083:1
so has part: feature:220190-220339:1:exon
so has part: feature:221701-221778:1:exon
so has part: feature:223642-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:238719-238805:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242239-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-244083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220190-220339:1:exon

position:220339:1
position: 220339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221701-221778:1:exon

position:221701:1
position: 221701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221778:1
position: 221778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223642-223860:1:exon

position:223642:1
position: 223642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223860:1
position: 223860
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:224488-224620:1:exon

position:224488:1
position: 224488
reference: sequence
type: ForwardStrandPosition
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position:224620:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:224950-225324:1:exon

position:224950:1
position: 224950
reference: sequence
type: ForwardStrandPosition
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position:225324:1
position: 225324
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:226010-226108:1:exon

position:226010:1
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reference: sequence
type: ForwardStrandPosition
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position:226108:1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:226641-226881:1:exon

position:226641:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226881:1
position: 226881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227397-227523:1:exon

position:227397:1
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reference: sequence
type: ForwardStrandPosition
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position:227523:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:227613-227786:1:exon

position:227613:1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:228066-228239:1:exon

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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:228427-228594:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:229032-229082:1:exon

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reference: sequence
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position:229082:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:229288-229418:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:229702-229759:1:exon

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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:230298-230416:1:exon

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reference: sequence
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position:230416:1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:230890-231040:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:231531-231694:1:exon

position:231531:1
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reference: sequence
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position:231694:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:231786-231852:1:exon

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reference: sequence
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position:231852:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:232089-232199:1:exon

position:232089:1
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urn:…
SIO_000300: 20
SIO_000628: feature:232826-233068:1:exon

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reference: sequence
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position:233068:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:233587-233700:1:exon

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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:234111-234218:1:exon

position:234111:1
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reference: sequence
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position:234218:1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:234657-234743:1:exon

position:234657:1
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reference: sequence
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position:234743:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:235108-235154:1:exon

position:235108:1
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reference: sequence
type: ForwardStrandPosition
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position:235154:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:235344-235510:1:exon

position:235344:1
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reference: sequence
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position:235510:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:236774-236937:1:exon

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reference: sequence
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position:236937:1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:238275-238502:1:exon

position:238275:1
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reference: sequence
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position:238502:1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:238719-238805:1:exon

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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:240092-240169:1:exon

position:240092:1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:241228-241446:1:exon

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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:241812-242062:1:exon

position:241812:1
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position:242062:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:242239-242347:1:exon

position:242239:1
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type: ForwardStrandPosition
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position:242347:1
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urn:…
SIO_000300: 33
SIO_000628: feature:242426-242527:1:exon

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position:242527:1
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urn:…
SIO_000300: 34
SIO_000628: feature:242679-242811:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:242811:1
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urn:…
SIO_000300: 35
SIO_000628: feature:242931-243070:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:243070:1
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urn:…
SIO_000300: 36
SIO_000628: feature:243486-244083:1:exon

position:243486:1
position: 243486
reference: sequence
type: ForwardStrandPosition
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SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289827.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
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location: region:220190-244083:1
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urn:…
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SIO_000300: 10
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SIO_000300: 20
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urn:…
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SIO_000300: 23
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urn:…
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urn:…
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SIO_000300: 30
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SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:242239-242347:1:exon

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SIO_000300: 33
SIO_000628: feature:242426-242527:1:exon

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SIO_000300: 34
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:243486-244083:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289824.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(220190..220339,221701..221778,223642..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,238719..238805,240092..240169,241228..241446,241812..242062,242242..242347,242426..242527,242679..242811,242931..243070,243486..244083)
location: region:220190-244083:1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 5
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urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 32
SIO_000628: feature:242242-242347:1:exon

position:242242:1
position: 242242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
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SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:243486-244083:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289825.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(220190..220339,221701..221778,223642..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,240092..240169,241228..241446,241812..242062,242239..242347,242426..242527,242679..242811,242931..243070,243486..244083)
location: region:220190-244083:1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 30
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urn:…
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urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:243486-244083:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289826.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(220190..220339,221701..221778,223642..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,240092..240169,241228..241446,241812..242062,242242..242347,242426..242527,242679..242811,242931..243070,243486..244083)
location: region:220190-244083:1
so has part: feature:220190-220339:1:exon
so has part: feature:221701-221778:1:exon
so has part: feature:223642-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242242-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-244083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220190-220339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221701-221778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223642-223860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242242-242347:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:243486-244083:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X1
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGTAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(223681..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,238719..238805,240092..240169,241228..241446,241812..242062,242239..242347,242426..242527,242679..242811,242931..243070,243486..243518)
location: region:223681-243518:1
so has part: feature:223681-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:238719-238805:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242239-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-243518:1:exon

XP_048145780.1
type: Protein
SIO_000068: ncbiprotein

position:223681:1
position: 223681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243518:1
position: 243518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223681-223860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:238719-238805:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:242239-242347:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:243486-243518:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X2
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGTAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(223681..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,238719..238805,240092..240169,241228..241446,241812..242062,242242..242347,242426..242527,242679..242811,242931..243070,243486..243518)
location: region:223681-243518:1
so has part: feature:223681-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:238719-238805:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242242-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-243518:1:exon

XP_048145781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223681-223860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:238719-238805:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:242242-242347:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:243486-243518:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X3
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGTAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(223681..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,240092..240169,241228..241446,241812..242062,242239..242347,242426..242527,242679..242811,242931..243070,243486..243518)
location: region:223681-243518:1
so has part: feature:223681-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242239-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-243518:1:exon

XP_048145782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223681-223860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:242239-242347:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:243486-243518:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X4
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGTAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(223681..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,240092..240169,241228..241446,241812..242062,242242..242347,242426..242527,242679..242811,242931..243070,243486..243518)
location: region:223681-243518:1
so has part: feature:223681-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242242-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:242931-243070:1:exon
so has part: feature:243486-243518:1:exon

XP_048145783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223681-223860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:242242-242347:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242931-243070:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:243486-243518:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X5
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGTAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEGSFRQRHRG
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(223681..223860,224488..224620,224950..225324,226010..226108,226641..226881,227397..227523,227613..227786,228066..228239,228427..228594,229032..229082,229288..229418,229702..229759,230298..230416,230890..231040,231531..231694,231786..231852,232089..232199,232826..233068,233587..233700,234111..234218,234657..234743,235108..235154,235344..235510,236774..236937,238275..238502,238719..238805,240092..240169,241228..241446,241812..242062,242239..242347,242426..242527,242679..242811,243486..243514)
location: region:223681-243514:1
so has part: feature:223681-223860:1:exon
so has part: feature:224488-224620:1:exon
so has part: feature:224950-225324:1:exon
so has part: feature:226010-226108:1:exon
so has part: feature:226641-226881:1:exon
so has part: feature:227397-227523:1:exon
so has part: feature:227613-227786:1:exon
so has part: feature:228066-228239:1:exon
so has part: feature:228427-228594:1:exon
so has part: feature:229032-229082:1:exon
so has part: feature:229288-229418:1:exon
so has part: feature:229702-229759:1:exon
so has part: feature:230298-230416:1:exon
so has part: feature:230890-231040:1:exon
so has part: feature:231531-231694:1:exon
so has part: feature:231786-231852:1:exon
so has part: feature:232089-232199:1:exon
so has part: feature:232826-233068:1:exon
so has part: feature:233587-233700:1:exon
so has part: feature:234111-234218:1:exon
so has part: feature:234657-234743:1:exon
so has part: feature:235108-235154:1:exon
so has part: feature:235344-235510:1:exon
so has part: feature:236774-236937:1:exon
so has part: feature:238275-238502:1:exon
so has part: feature:238719-238805:1:exon
so has part: feature:240092-240169:1:exon
so has part: feature:241228-241446:1:exon
so has part: feature:241812-242062:1:exon
so has part: feature:242239-242347:1:exon
so has part: feature:242426-242527:1:exon
so has part: feature:242679-242811:1:exon
so has part: feature:243486-243514:1:exon

XP_048145784.1
type: Protein
SIO_000068: ncbiprotein

position:243514:1
position: 243514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223681-223860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224488-224620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224950-225324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226010-226108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226641-226881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227397-227523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227613-227786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228066-228239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228427-228594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229032-229082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229288-229418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229702-229759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230298-230416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230890-231040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:231531-231694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231786-231852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232089-232199:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232826-233068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233587-233700:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234111-234218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234657-234743:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235108-235154:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:235344-235510:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:236774-236937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:238275-238502:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:238719-238805:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:240092-240169:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:241228-241446:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:241812-242062:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:242239-242347:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:242426-242527:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:242679-242811:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:243486-243514:1:exon

LOC125318913
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 244790..252037
location: region:244790-252037:1
so has part: feature:244790-252037:1:exon
subclass of: SO_0000010

125318913
type: Gene
SIO_000068: ncbigene

position:244790:1
position: 244790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252037:1
position: 252037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244790-252037:1:exon

LOC125318913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318913
product: low-density lipoprotein receptor-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048289864.1
SIO_010081: LOC125318913
subclass of: SO_0000673
so part of: LOC125318913
location: join(244790..244946,245100..245245,246339..246720,246917..247042,247422..247544,247925..248047,248369..248534,248887..249105,249314..249433,249682..249821,250041..250185,250362..250505,250577..250639,250713..250778,251263..251409,251524..252037)
location: region:244790-252037:1
so has part: feature:244790-244946:1:exon
so has part: feature:245100-245245:1:exon
so has part: feature:246339-246720:1:exon
so has part: feature:246917-247042:1:exon
so has part: feature:247422-247544:1:exon
so has part: feature:247925-248047:1:exon
so has part: feature:248369-248534:1:exon
so has part: feature:248887-249105:1:exon
so has part: feature:249314-249433:1:exon
so has part: feature:249682-249821:1:exon
so has part: feature:250041-250185:1:exon
so has part: feature:250362-250505:1:exon
so has part: feature:250577-250639:1:exon
so has part: feature:250713-250778:1:exon
so has part: feature:251263-251409:1:exon
so has part: feature:251524-252037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244790-244946:1:exon

position:244946:1
position: 244946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245100-245245:1:exon

position:245100:1
position: 245100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245245:1
position: 245245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246339-246720:1:exon

position:246339:1
position: 246339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246720:1
position: 246720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246917-247042:1:exon

position:246917:1
position: 246917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247042:1
position: 247042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:247422-247544:1:exon

position:247422:1
position: 247422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247544:1
position: 247544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247925-248047:1:exon

position:247925:1
position: 247925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248047:1
position: 248047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:248369-248534:1:exon

position:248369:1
position: 248369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248534:1
position: 248534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:248887-249105:1:exon

position:248887:1
position: 248887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249105:1
position: 249105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:249314-249433:1:exon

position:249314:1
position: 249314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249433:1
position: 249433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:249682-249821:1:exon

position:249682:1
position: 249682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249821:1
position: 249821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:250041-250185:1:exon

position:250041:1
position: 250041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250185:1
position: 250185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:250362-250505:1:exon

position:250362:1
position: 250362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250505:1
position: 250505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:250577-250639:1:exon

position:250577:1
position: 250577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250639:1
position: 250639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:250713-250778:1:exon

position:250713:1
position: 250713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250778:1
position: 250778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:251263-251409:1:exon

position:251263:1
position: 251263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251409:1
position: 251409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:251524-252037:1:exon

position:251524:1
position: 251524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125318913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318913
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: low-density lipoprotein receptor-like
translation: MGPDGTRVQGRRRREHRHGPGSAPGPGSAPGTAQAPGSTPGRTGTGTGIVTEQREQPGADLGPPRWALGLPGGDREAPGRAPGPSCSFWERRRPRRRHRAQRPPPCPPDQLPCGDGSCLSRTFACDGERDCPDGEDELGCGPAPSPPPCDPFYFRCRDGSCIPLLWRCDGERDCRDGGDEEPELCGTPRPPRACPPLQFPCGSGECVHGRWRCDGTPDCRDSSDEEGCAAPPPCPLGQLRCRDGRCIPGARACDGTPDCRDGDDEEECPDAPSCAPPHRFRCRSGECIAIGQVCDARRHCRDWSDEPLKECGVNECLAGGGGCSHGCRDLRVGFECLCPPGFSLDPDNRTCHGPPGTLLVSTRHQVLALGGPEPQILRGPIKHAAALDVGIEGGSLFWGDPSEGLIYRAPLAAGPAVPLGVVPGPGSPAGIALDWIHRLLYWTEPGSGCVAVSDPSGLRHRTLHRDPRTRPWGVVVDPLNGYLYWSDWGSRPHIAQGAQDGAPPQALVTEDVERPQGLALDQSSQRLYWADGRLHTVSSVALDGSGRQTHLRDPQHLAQPLGLAVFQDWAFWTDPSRGSLVATRLQGGSSAPQVVAQELFSPEAVVVLHPGRQPAGPNRCEGPGGACSFLCLPSPIRGPGSPRFSCACPDGEHLDSDGRTCVIEHPGTPEPLARNLSKEGNASIGDLGGTGGAWPGLTALGVLLPLGLVLCLGVAARALWREWRRRSTNSISFTNATFRKGPGDPLDGGGARGPPAATDVRG
SIO_010081: LOC125318913
subclass of: SO_0000673
so part of: LOC125318913
location: join(244790..244946,245100..245245,246339..246720,246917..247042,247422..247544,247925..248047,248369..248534,248887..249105,249314..249433,249682..249821,250041..250185,250362..250505,250577..250639,250713..250778,251263..251409,251524..251546)
location: region:244790-251546:1
so has part: feature:244790-244946:1:exon
so has part: feature:245100-245245:1:exon
so has part: feature:246339-246720:1:exon
so has part: feature:246917-247042:1:exon
so has part: feature:247422-247544:1:exon
so has part: feature:247925-248047:1:exon
so has part: feature:248369-248534:1:exon
so has part: feature:248887-249105:1:exon
so has part: feature:249314-249433:1:exon
so has part: feature:249682-249821:1:exon
so has part: feature:250041-250185:1:exon
so has part: feature:250362-250505:1:exon
so has part: feature:250577-250639:1:exon
so has part: feature:250713-250778:1:exon
so has part: feature:251263-251409:1:exon
so has part: feature:251524-251546:1:exon

XP_048145821.1
type: Protein
SIO_000068: ncbiprotein

position:251546:1
position: 251546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244790-244946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245100-245245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246339-246720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246917-247042:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247422-247544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247925-248047:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:248369-248534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:248887-249105:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249314-249433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249682-249821:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250041-250185:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250362-250505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250577-250639:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:250713-250778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:251263-251409:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:251524-251546:1:exon

LOC125318875
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252613..262364
location: region:252613-262364:1
so has part: feature:252613-262364:1:exon
subclass of: SO_0000010

125318875
type: Gene
SIO_000068: ncbigene

position:252613:1
position: 252613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262364:1
position: 262364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252613-262364:1:exon

LOC125318875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318875
product: KH-type splicing regulatory protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons
transcript id: XM_048289796.1
SIO_010081: LOC125318875
subclass of: SO_0000673
so part of: LOC125318875
location: join(252613..252999,254180..254289,254408..254446,254940..254979,255315..255365,255466..255537,255650..255707,256101..256273,256486..256584,256672..256770,257315..257417,257520..257620,258362..258504,259183..259343,259576..259694,259772..259860,260278..260469,260945..261022,261113..261273,261789..262364)
location: region:252613-262364:1
so has part: feature:252613-252999:1:exon
so has part: feature:254180-254289:1:exon
so has part: feature:254408-254446:1:exon
so has part: feature:254940-254979:1:exon
so has part: feature:255315-255365:1:exon
so has part: feature:255466-255537:1:exon
so has part: feature:255650-255707:1:exon
so has part: feature:256101-256273:1:exon
so has part: feature:256486-256584:1:exon
so has part: feature:256672-256770:1:exon
so has part: feature:257315-257417:1:exon
so has part: feature:257520-257620:1:exon
so has part: feature:258362-258504:1:exon
so has part: feature:259183-259343:1:exon
so has part: feature:259576-259694:1:exon
so has part: feature:259772-259860:1:exon
so has part: feature:260278-260469:1:exon
so has part: feature:260945-261022:1:exon
so has part: feature:261113-261273:1:exon
so has part: feature:261789-262364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252613-252999:1:exon

position:252999:1
position: 252999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254180-254289:1:exon

position:254180:1
position: 254180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254289:1
position: 254289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254408-254446:1:exon

position:254408:1
position: 254408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254446:1
position: 254446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254940-254979:1:exon

position:254940:1
position: 254940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254979:1
position: 254979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255315-255365:1:exon

position:255315:1
position: 255315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255365:1
position: 255365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255466-255537:1:exon

position:255466:1
position: 255466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255537:1
position: 255537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255650-255707:1:exon

position:255650:1
position: 255650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255707:1
position: 255707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:256101-256273:1:exon

position:256101:1
position: 256101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256273:1
position: 256273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:256486-256584:1:exon

position:256486:1
position: 256486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256584:1
position: 256584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:256672-256770:1:exon

position:256672:1
position: 256672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256770:1
position: 256770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:257315-257417:1:exon

position:257315:1
position: 257315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257417:1
position: 257417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:257520-257620:1:exon

position:257520:1
position: 257520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257620:1
position: 257620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:258362-258504:1:exon

position:258362:1
position: 258362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258504:1
position: 258504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:259183-259343:1:exon

position:259183:1
position: 259183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259343:1
position: 259343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:259576-259694:1:exon

position:259576:1
position: 259576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259694:1
position: 259694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:259772-259860:1:exon

position:259772:1
position: 259772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259860:1
position: 259860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:260278-260469:1:exon

position:260278:1
position: 260278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260469:1
position: 260469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:260945-261022:1:exon

position:260945:1
position: 260945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261022:1
position: 261022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:261113-261273:1:exon

position:261113:1
position: 261113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261273:1
position: 261273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:261789-262364:1:exon

position:261789:1
position: 261789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125318875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318875
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: far upstream element-binding protein 2
translation: MTQSRRAGVLPAPIGRCALPAAAYWSRAPSLRAIRRGDWPHGAGVGGAPRRAPSVPRAARGERGPCPSPPPPCPSSAPRRPRPPSPGPPPPPPPSAGPGGGPGGGGGGGGGGGTGRKDAFADAVQRARQIAAKIGGDAAPPVPNNNPPPPDFGASGGQKRQLEDGDQPESKKLAAQGDALPAPMGPIHPPPRTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPESVQKAKALLDDIVSRGRGGPPGPFPDAANGQNGTVQELMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGEPYKVQQACEMVLDILRERDQGGFGERSDYGARLGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINDLLQSLRSGPPGPPGPGLPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGTPQQIDHAKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAPAPDPNAAWAAYYSHYYQQPPGPVPAQPPPAAPPVQGEPPQPPPTGQADYTKAWEEYYKKLGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVASGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGGAGPAPPPAQQGQQAQ
SIO_010081: LOC125318875
subclass of: SO_0000673
so part of: LOC125318875
location: join(252613..252999,254180..254289,254408..254446,254940..254979,255315..255365,255466..255537,255650..255707,256101..256273,256486..256584,256672..256770,257315..257417,257520..257620,258362..258504,259183..259343,259576..259694,259772..259860,260278..260469,260945..261022,261113..261273,261789..261797)
location: region:252613-261797:1
so has part: feature:252613-252999:1:exon
so has part: feature:254180-254289:1:exon
so has part: feature:254408-254446:1:exon
so has part: feature:254940-254979:1:exon
so has part: feature:255315-255365:1:exon
so has part: feature:255466-255537:1:exon
so has part: feature:255650-255707:1:exon
so has part: feature:256101-256273:1:exon
so has part: feature:256486-256584:1:exon
so has part: feature:256672-256770:1:exon
so has part: feature:257315-257417:1:exon
so has part: feature:257520-257620:1:exon
so has part: feature:258362-258504:1:exon
so has part: feature:259183-259343:1:exon
so has part: feature:259576-259694:1:exon
so has part: feature:259772-259860:1:exon
so has part: feature:260278-260469:1:exon
so has part: feature:260945-261022:1:exon
so has part: feature:261113-261273:1:exon
so has part: feature:261789-261797:1:exon

XP_048145753.1
type: Protein
SIO_000068: ncbiprotein

position:261797:1
position: 261797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252613-252999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254180-254289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254408-254446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254940-254979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255315-255365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255466-255537:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255650-255707:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256101-256273:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256486-256584:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256672-256770:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257315-257417:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257520-257620:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258362-258504:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259183-259343:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259576-259694:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:259772-259860:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:260278-260469:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:260945-261022:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:261113-261273:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261789-261797:1:exon

GTF2F1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 262870..267801
location: region:262870-267801:1
so has part: feature:262870-267801:1:exon
subclass of: SO_0000010

125318885
type: Gene
SIO_000068: ncbigene

position:262870:1
position: 262870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267801:1
position: 267801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262870-267801:1:exon

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: GTF2F1
product: general transcription factor IIF subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
transcript id: XM_048289808.1
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(262870..263053,263296..263341,263776..263848,264095..264308,264463..264633,264959..265186,265480..265608,266010..266074,266175..266291,266375..266448,266535..266670,266981..267104,267187..267801)
location: region:262870-267801:1
so has part: feature:262870-263053:1:exon
so has part: feature:263296-263341:1:exon
so has part: feature:263776-263848:1:exon
so has part: feature:264095-264308:1:exon
so has part: feature:264463-264633:1:exon
so has part: feature:264959-265186:1:exon
so has part: feature:265480-265608:1:exon
so has part: feature:266010-266074:1:exon
so has part: feature:266175-266291:1:exon
so has part: feature:266375-266448:1:exon
so has part: feature:266535-266670:1:exon
so has part: feature:266981-267104:1:exon
so has part: feature:267187-267801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262870-263053:1:exon

position:263053:1
position: 263053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263296-263341:1:exon

position:263296:1
position: 263296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263341:1
position: 263341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263776-263848:1:exon

position:263776:1
position: 263776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263848:1
position: 263848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264095-264308:1:exon

position:264095:1
position: 264095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264308:1
position: 264308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:264463-264633:1:exon

position:264463:1
position: 264463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264633:1
position: 264633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264959-265186:1:exon

position:264959:1
position: 264959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265186:1
position: 265186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265480-265608:1:exon

position:265480:1
position: 265480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265608:1
position: 265608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:266010-266074:1:exon

position:266010:1
position: 266010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266074:1
position: 266074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:266175-266291:1:exon

position:266175:1
position: 266175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266291:1
position: 266291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266375-266448:1:exon

position:266375:1
position: 266375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266448:1
position: 266448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266535-266670:1:exon

position:266535:1
position: 266535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266670:1
position: 266670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:266981-267104:1:exon

position:266981:1
position: 266981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267104:1
position: 267104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:267187-267801:1:exon

position:267187:1
position: 267187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: GTF2F1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: general transcription factor IIF subunit 1
translation: MGSRLWGFPGPDPPPFPPQDPLSWIWGCAPLSPHDGRTGQQLQVVTEYVVRVPKNTPKRYNIMAFNSADRVTLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRKLREEAEEEIRDRRKKYGIVLREFRAEDQPWLLRVNGKTGRKFRGVKKGGVTENASYYVFTQCPDGAFEAFPVRNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEDEDKDKGRKAPGKGGGLRIHDLEEDLELSSEESEGSEAEGERGKSRNLTESSSKLPEGARGGGGKKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSSGEEDAGKAKAPKEEEEGPKGIDEASESSEESEEEKPEEKEEEEEGKATPTPQDKKKKRESSDESQTSEESDIDSETSSALFMAKKKTPPKRERRASGSSSRGGSRPGTPTDSGGTGGTLRAAAARLEQGRRAPPGGSEPPPQKRLKVEPGPPSGKCTPQPHSGKSTPSSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(262939..263053,263296..263341,263776..263848,264095..264308,264463..264633,264959..265186,265480..265608,266010..266074,266175..266291,266375..266448,266535..266670,266981..267104,267187..267391)
location: region:262939-267391:1
so has part: feature:262939-263053:1:exon
so has part: feature:263296-263341:1:exon
so has part: feature:263776-263848:1:exon
so has part: feature:264095-264308:1:exon
so has part: feature:264463-264633:1:exon
so has part: feature:264959-265186:1:exon
so has part: feature:265480-265608:1:exon
so has part: feature:266010-266074:1:exon
so has part: feature:266175-266291:1:exon
so has part: feature:266375-266448:1:exon
so has part: feature:266535-266670:1:exon
so has part: feature:266981-267104:1:exon
so has part: feature:267187-267391:1:exon

XP_048145765.1
type: Protein
SIO_000068: ncbiprotein

position:262939:1
position: 262939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267391:1
position: 267391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262939-263053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263296-263341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263776-263848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264095-264308:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264463-264633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264959-265186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265480-265608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266010-266074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266175-266291:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266375-266448:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266535-266670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266981-267104:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:267187-267391:1:exon

PSPN
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PSPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 268325..269091
location: region:268325-269091:1
so has part: feature:268325-269091:1:exon
subclass of: SO_0000010

125318884
type: Gene
SIO_000068: ncbigene

position:268325:1
position: 268325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269091:1
position: 269091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268325-269091:1:exon

PSPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PSPN
product: persephin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289807.1
SIO_010081: PSPN
subclass of: SO_0000673
so part of: PSPN
location: 268325..269091
location: region:268325-269091:1
so has part: feature:268325-269091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268325-269091:1:exon

PSPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PSPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: persephin
translation: MARPGLPWSFLLLLLPLCCGPPAPPPAAAPPCGLRSVSVGVGALGLGYPSPETVVFRYCGGGCPAPPTLHGLALGAVLGPGGAGGGPCCRPTRYEDVAFLDSGLRWQRLPRLSAGACACLG
SIO_010081: PSPN
subclass of: SO_0000673
so part of: PSPN
location: 268420..268785
location: region:268420-268785:1
so has part: feature:268420-268785:1:exon

XP_048145764.1
type: Protein
SIO_000068: ncbiprotein

position:268420:1
position: 268420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268785:1
position: 268785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268420-268785:1:exon

ALKBH7
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269022..270545)
location: region:269022-270545:-1
so has part: feature:269022-270545:-1:exon
subclass of: SO_0000010

125318883
type: Gene
SIO_000068: ncbigene

position:269022:-1
position: 269022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270545:-1
position: 270545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269022-270545:-1:exon

ALKBH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ALKBH7
product: alkB homolog 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289806.1
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: complement(join(269022..269109,269402..269520,269616..269740,269846..270016,270210..270545))
location: region:269022-270545:-1
so has part: feature:270210-270545:-1:exon
so has part: feature:269846-270016:-1:exon
so has part: feature:269616-269740:-1:exon
so has part: feature:269402-269520:-1:exon
so has part: feature:269022-269109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270210-270545:-1:exon

position:270210:-1
position: 270210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269846-270016:-1:exon

position:269846:-1
position: 269846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270016:-1
position: 270016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269616-269740:-1:exon

position:269616:-1
position: 269616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269740:-1
position: 269740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269402-269520:-1:exon

position:269402:-1
position: 269402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269520:-1
position: 269520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:269022-269109:-1:exon

position:269109:-1
position: 269109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALKBH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
translation: MHRARGLWRGGVAATLGGSRAISGVPGAASGCPGAGLGPEAEADPALLRASSPEVARRLRGLALVRGGFVSEEEAAELLREVEPGLGRGRYQNDHWDRAITGYRETERGLRGGAGRALLLRVTPAFPPRRPPRPSAHVLDLLPGGRVGPHVDSVKFCGCTIAGVSLLSPSVLRLRSLQDPQDWLELLLEPGSLYVLRAAARYEFTHEILPDEESFFGGLRVPRGRRVALIFRNDPSETPPDPLSDLPVFIEDTQDSPPPK
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: complement(join(269036..269109,269402..269520,269616..269740,269846..270016,270210..270503))
location: region:269036-270503:-1
so has part: feature:270210-270503:-1:exon
so has part: feature:269846-270016:-1:exon
so has part: feature:269616-269740:-1:exon
so has part: feature:269402-269520:-1:exon
so has part: feature:269036-269109:-1:exon

XP_048145763.1
type: Protein
SIO_000068: ncbiprotein

position:269036:-1
position: 269036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270503:-1
position: 270503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270210-270503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269846-270016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269616-269740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269402-269520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269036-269109:-1:exon

LOC125318918
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270827..273379)
location: region:270827-273379:-1
so has part: feature:270827-273379:-1:exon
subclass of: SO_0000010

125318918
type: Gene
SIO_000068: ncbigene

position:270827:-1
position: 270827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273379:-1
position: 273379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270827-273379:-1:exon

LOC125318918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318918
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289872.1
SIO_010081: LOC125318918
subclass of: SO_0000673
so part of: LOC125318918
location: complement(join(270827..271091,271278..271383,271725..271912,272447..272543,272634..272705,272957..273055,273282..273379))
location: region:270827-273379:-1
so has part: feature:273282-273379:-1:exon
so has part: feature:272957-273055:-1:exon
so has part: feature:272634-272705:-1:exon
so has part: feature:272447-272543:-1:exon
so has part: feature:271725-271912:-1:exon
so has part: feature:271278-271383:-1:exon
so has part: feature:270827-271091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273282-273379:-1:exon

position:273282:-1
position: 273282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272957-273055:-1:exon

position:272957:-1
position: 272957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273055:-1
position: 273055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272634-272705:-1:exon

position:272634:-1
position: 272634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272705:-1
position: 272705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272447-272543:-1:exon

position:272447:-1
position: 272447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272543:-1
position: 272543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271725-271912:-1:exon

position:271725:-1
position: 271725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271912:-1
position: 271912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271278-271383:-1:exon

position:271278:-1
position: 271278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271383:-1
position: 271383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270827-271091:-1:exon

position:271091:-1
position: 271091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125318918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial
translation: MGPGVARSLRRAWAGARRCLHGTVPTRAPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNKKPIHMYINSPGGSVTSGLAIYDTMQYVLTPVCTWCVGQAASMGSLLLAAGAPGMRHALPNARIMVHQPSGGARGQATDIAIQAEEILQLKRQINGLYAKHTGQPLPVIEAAMERDRYLSPVEAQEFGLLDQVLVHPPPRGEDEPRLVQKEPPNSPSGPPQIPLAS
SIO_010081: LOC125318918
subclass of: SO_0000673
so part of: LOC125318918
location: complement(join(270919..271091,271278..271383,271725..271912,272447..272543,272634..272705,272957..273055,273282..273299))
location: region:270919-273299:-1
so has part: feature:273282-273299:-1:exon
so has part: feature:272957-273055:-1:exon
so has part: feature:272634-272705:-1:exon
so has part: feature:272447-272543:-1:exon
so has part: feature:271725-271912:-1:exon
so has part: feature:271278-271383:-1:exon
so has part: feature:270919-271091:-1:exon

XP_048145829.1
type: Protein
SIO_000068: ncbiprotein

position:270919:-1
position: 270919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273299:-1
position: 273299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273282-273299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272957-273055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272634-272705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272447-272543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271725-271912:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271278-271383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270919-271091:-1:exon

RFX1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274230..280607
location: region:274230-280607:1
so has part: feature:274230-280607:1:exon
subclass of: SO_0000010

125318917
type: Gene
SIO_000068: ncbigene

position:274230:1
position: 274230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280607:1
position: 280607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274230-280607:1:exon

RFX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RFX1
product: regulatory factor X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048289871.1
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: join(274230..274295,274671..274880,275012..275100,275680..275768,275866..276190,276667..276848,277050..277169,277247..277362,277455..277573,277652..277740,278038..278189,278439..278536,278837..278986,279167..279375,279554..279707,279917..279962,280167..280607)
location: region:274230-280607:1
so has part: feature:274230-274295:1:exon
so has part: feature:274671-274880:1:exon
so has part: feature:275012-275100:1:exon
so has part: feature:275680-275768:1:exon
so has part: feature:275866-276190:1:exon
so has part: feature:276667-276848:1:exon
so has part: feature:277050-277169:1:exon
so has part: feature:277247-277362:1:exon
so has part: feature:277455-277573:1:exon
so has part: feature:277652-277740:1:exon
so has part: feature:278038-278189:1:exon
so has part: feature:278439-278536:1:exon
so has part: feature:278837-278986:1:exon
so has part: feature:279167-279375:1:exon
so has part: feature:279554-279707:1:exon
so has part: feature:279917-279962:1:exon
so has part: feature:280167-280607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274230-274295:1:exon

position:274295:1
position: 274295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274671-274880:1:exon

position:274671:1
position: 274671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274880:1
position: 274880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275012-275100:1:exon

position:275012:1
position: 275012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275100:1
position: 275100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275680-275768:1:exon

position:275680:1
position: 275680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275768:1
position: 275768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275866-276190:1:exon

position:275866:1
position: 275866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276190:1
position: 276190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276667-276848:1:exon

position:276667:1
position: 276667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276848:1
position: 276848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277050-277169:1:exon

position:277050:1
position: 277050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277169:1
position: 277169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277247-277362:1:exon

position:277247:1
position: 277247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277362:1
position: 277362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:277455-277573:1:exon

position:277455:1
position: 277455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277573:1
position: 277573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:277652-277740:1:exon

position:277652:1
position: 277652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277740:1
position: 277740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:278038-278189:1:exon

position:278038:1
position: 278038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278189:1
position: 278189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:278439-278536:1:exon

position:278439:1
position: 278439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278536:1
position: 278536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:278837-278986:1:exon

position:278837:1
position: 278837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278986:1
position: 278986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:279167-279375:1:exon

position:279167:1
position: 279167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279375:1
position: 279375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:279554-279707:1:exon

position:279554:1
position: 279554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279707:1
position: 279707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:279917-279962:1:exon

position:279917:1
position: 279917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279962:1
position: 279962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:280167-280607:1:exon

position:280167:1
position: 280167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MHC class II regulatory factor RFX1
translation: MATQPSYVTELTATTSQQQQPPASAPPPAGTAPFGAELPGGTASGAPPPAPPAPAPPPQQFIVVTVAAEGLRPPEGAEGSPAPPAPPQPGPSPGGQQVQQLPPVQHVFPAPVSYVEGGDGSYPPGAIRSGSFPFTETPLFGQNSGGYFEGAGGAAVQPSPPPPPPPPASSQAPPASAPVPMYVAGGQILGSPPAPPQGSSGTPGAPGGGTYVIQGGYMGGGGAAYAHTTRASPATVQWLLDNYETAEGVSLPRSALYCHYLLHCQGHKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSPLLRLVEDQQHLAMRQQPFAQKQRLKPVQKVEGGVTNGVSSGPAPPGVPDISAQVQQYQQFLDASRTLPEFPEIDVQGKGLPEGAGAEDLRVFQQLYREHCEAIVDVMINLQFSLVETLWKSFWRCSGETEAQEEAERRLPRRRLLLLARHEPVLRWVRDCDHALYQGLVEILVPDVLRPIPSALTQAIRNFAKSLESWLGNAMVSMPEEMVRVKAAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQISQMLSDLNRVDFANVQEQAAWVCRCEARVVQRLEQDFKATLGQQHSLEQWAAWLDAVVGRVLRPHLGTPGLPRAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEQRVARARGTCPIAVMGEFANLTSSLNSQDPDKDEEEEEEEESDEELPAELGLGGGEGPPDALEPPLEPPLDPPPAKLPRADPRGLFVQALPSS
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: join(274679..274880,275012..275100,275680..275768,275866..276190,276667..276848,277050..277169,277247..277362,277455..277573,277652..277740,278038..278189,278439..278536,278837..278986,279167..279375,279554..279707,279917..279962,280167..280351)
location: region:274679-280351:1
so has part: feature:274679-274880:1:exon
so has part: feature:275012-275100:1:exon
so has part: feature:275680-275768:1:exon
so has part: feature:275866-276190:1:exon
so has part: feature:276667-276848:1:exon
so has part: feature:277050-277169:1:exon
so has part: feature:277247-277362:1:exon
so has part: feature:277455-277573:1:exon
so has part: feature:277652-277740:1:exon
so has part: feature:278038-278189:1:exon
so has part: feature:278439-278536:1:exon
so has part: feature:278837-278986:1:exon
so has part: feature:279167-279375:1:exon
so has part: feature:279554-279707:1:exon
so has part: feature:279917-279962:1:exon
so has part: feature:280167-280351:1:exon

XP_048145828.1
type: Protein
SIO_000068: ncbiprotein

position:274679:1
position: 274679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280351:1
position: 280351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274679-274880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275012-275100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275680-275768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275866-276190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276667-276848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277050-277169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277247-277362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277455-277573:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:277652-277740:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278038-278189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278439-278536:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278837-278986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:279167-279375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:279554-279707:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:279917-279962:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:280167-280351:1:exon

DCAF15
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(281178..285781)
location: region:281178-285781:-1
so has part: feature:281178-285781:-1:exon
subclass of: SO_0000010

125318889
type: Gene
SIO_000068: ncbigene

position:281178:-1
position: 281178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285781:-1
position: 285781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281178-285781:-1:exon

DCAF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DCAF15
product: DDB1 and CUL4 associated factor 15
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_048289818.1
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: complement(join(281178..281317,281623..281738,282188..282292,282360..282445,282698..282826,282922..283013,283089..283530,283620..283790,283976..284112,284190..284296,284368..284503,284912..285009,285653..285781))
location: region:281178-285781:-1
so has part: feature:285653-285781:-1:exon
so has part: feature:284912-285009:-1:exon
so has part: feature:284368-284503:-1:exon
so has part: feature:284190-284296:-1:exon
so has part: feature:283976-284112:-1:exon
so has part: feature:283620-283790:-1:exon
so has part: feature:283089-283530:-1:exon
so has part: feature:282922-283013:-1:exon
so has part: feature:282698-282826:-1:exon
so has part: feature:282360-282445:-1:exon
so has part: feature:282188-282292:-1:exon
so has part: feature:281623-281738:-1:exon
so has part: feature:281178-281317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285653-285781:-1:exon

position:285653:-1
position: 285653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284912-285009:-1:exon

position:284912:-1
position: 284912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285009:-1
position: 285009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284368-284503:-1:exon

position:284368:-1
position: 284368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284503:-1
position: 284503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284190-284296:-1:exon

position:284190:-1
position: 284190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284296:-1
position: 284296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283976-284112:-1:exon

position:283976:-1
position: 283976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284112:-1
position: 284112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283620-283790:-1:exon

position:283620:-1
position: 283620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283790:-1
position: 283790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283089-283530:-1:exon

position:283089:-1
position: 283089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283530:-1
position: 283530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:282922-283013:-1:exon

position:282922:-1
position: 282922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283013:-1
position: 283013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:282698-282826:-1:exon

position:282698:-1
position: 282698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282826:-1
position: 282826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:282360-282445:-1:exon

position:282360:-1
position: 282360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282445:-1
position: 282445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:282188-282292:-1:exon

position:282188:-1
position: 282188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282292:-1
position: 282292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:281623-281738:-1:exon

position:281623:-1
position: 281623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281738:-1
position: 281738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:281178-281317:-1:exon

position:281317:-1
position: 281317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DCAF15
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 15
translation: MAPSSKAERGGPGGKRGAAGGAGPGAAPRGRREHLVRQLDRVRLSGQLSPRLFRKLPPRVCVTLKSIVDEEFLWAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYLYHLYWWEFNVHSKLRLVRQVRLFQDEEIYSDLYLTVCEWPGDSDKVIVFGFNTRSAPGLQVNMMLMSDENHRDIYVSAVAVPPPRHCPACRRAPAPPGEAPPACLRHGFLLHTKFQVVYPFPTFQPAFQLRKDHVVLLNTSFSLVACAIAVHPAGDSSSRQILYERRNVPGPNRRGGKRPPPTPRGAGGGWGGPPGRTDPPGTPPNPRPPPCTXPSPAVAKAKEFVADLFRRAQGAGGGPEGAHGDGGDDPPPSPRGLPPETTPPAPGSPLGESHPPGTSPEPGYVNYTKLRYVLEPGEPPEDLEDDKISLPFVVTDLSGRSLRPLRDRAKAQGQYLTVEQLTLDFEYVINEVIRNDAAWSRQFCSFSDYDIVILEVCPETNQVVINIGLLLLAFPSPDEEGQLRPRTYHTSLKVAWDLNSGTFATVGVGDLTEVKGQTSGSVWSSYRKGCVDTVMRWLVPEGPGRGVHRMTNEALHKGCSLKVLADNERYTWIVL
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: complement(join(281262..281317,281623..281738,282188..282292,282360..282445,282698..282826,282922..283013,283089..283530,283620..283790,283976..284112,284190..284296,284368..284503,284912..285009,285653..285781))
location: region:281262-285781:-1
so has part: feature:285653-285781:-1:exon
so has part: feature:284912-285009:-1:exon
so has part: feature:284368-284503:-1:exon
so has part: feature:284190-284296:-1:exon
so has part: feature:283976-284112:-1:exon
so has part: feature:283620-283790:-1:exon
so has part: feature:283089-283530:-1:exon
so has part: feature:282922-283013:-1:exon
so has part: feature:282698-282826:-1:exon
so has part: feature:282360-282445:-1:exon
so has part: feature:282188-282292:-1:exon
so has part: feature:281623-281738:-1:exon
so has part: feature:281262-281317:-1:exon

XP_048145775.1
type: Protein
SIO_000068: ncbiprotein

position:281262:-1
position: 281262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285653-285781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284912-285009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284368-284503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284190-284296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283976-284112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283620-283790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283089-283530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282922-283013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282698-282826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282360-282445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282188-282292:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281623-281738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:281262-281317:-1:exon

CC2D1A
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(286452..294140)
location: region:286452-294140:-1
so has part: feature:286452-294140:-1:exon
subclass of: SO_0000010

125318888
type: Gene
SIO_000068: ncbigene

position:286452:-1
position: 286452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294140:-1
position: 294140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286452-294140:-1:exon

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_048289817.1
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: complement(join(286452..286572,286660..286707,287129..287205,287316..287442,287536..287599,287807..287859,287944..288078,288280..288370,288852..288951,289044..289095,289220..289278,289385..289458,289545..289661,289795..289853,290106..290228,290444..290616,290699..290780,290881..291023,291110..291182,291433..291563,291647..291736,291843..291897,291989..292300,292734..292865,292944..293006,293091..293197,293287..293434,293601..293675,294040..294140))
location: region:286452-294140:-1
so has part: feature:294040-294140:-1:exon
so has part: feature:293601-293675:-1:exon
so has part: feature:293287-293434:-1:exon
so has part: feature:293091-293197:-1:exon
so has part: feature:292944-293006:-1:exon
so has part: feature:292734-292865:-1:exon
so has part: feature:291989-292300:-1:exon
so has part: feature:291843-291897:-1:exon
so has part: feature:291647-291736:-1:exon
so has part: feature:291433-291563:-1:exon
so has part: feature:291110-291182:-1:exon
so has part: feature:290881-291023:-1:exon
so has part: feature:290699-290780:-1:exon
so has part: feature:290444-290616:-1:exon
so has part: feature:290106-290228:-1:exon
so has part: feature:289795-289853:-1:exon
so has part: feature:289545-289661:-1:exon
so has part: feature:289385-289458:-1:exon
so has part: feature:289220-289278:-1:exon
so has part: feature:289044-289095:-1:exon
so has part: feature:288852-288951:-1:exon
so has part: feature:288280-288370:-1:exon
so has part: feature:287944-288078:-1:exon
so has part: feature:287807-287859:-1:exon
so has part: feature:287536-287599:-1:exon
so has part: feature:287316-287442:-1:exon
so has part: feature:287129-287205:-1:exon
so has part: feature:286660-286707:-1:exon
so has part: feature:286452-286572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294040-294140:-1:exon

position:294040:-1
position: 294040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293601-293675:-1:exon

position:293601:-1
position: 293601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293675:-1
position: 293675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293287-293434:-1:exon

position:293287:-1
position: 293287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293434:-1
position: 293434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293091-293197:-1:exon

position:293091:-1
position: 293091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293197:-1
position: 293197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292944-293006:-1:exon

position:292944:-1
position: 292944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293006:-1
position: 293006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292734-292865:-1:exon

position:292734:-1
position: 292734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292865:-1
position: 292865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291989-292300:-1:exon

position:291989:-1
position: 291989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292300:-1
position: 292300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291843-291897:-1:exon

position:291843:-1
position: 291843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291897:-1
position: 291897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291647-291736:-1:exon

position:291647:-1
position: 291647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291736:-1
position: 291736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:291433-291563:-1:exon

position:291433:-1
position: 291433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291563:-1
position: 291563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:291110-291182:-1:exon

position:291110:-1
position: 291110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291182:-1
position: 291182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:290881-291023:-1:exon

position:290881:-1
position: 290881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291023:-1
position: 291023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:290699-290780:-1:exon

position:290699:-1
position: 290699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290780:-1
position: 290780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:290444-290616:-1:exon

position:290444:-1
position: 290444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290616:-1
position: 290616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:290106-290228:-1:exon

position:290106:-1
position: 290106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290228:-1
position: 290228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:289795-289853:-1:exon

position:289795:-1
position: 289795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289853:-1
position: 289853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:289545-289661:-1:exon

position:289545:-1
position: 289545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289661:-1
position: 289661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:289385-289458:-1:exon

position:289385:-1
position: 289385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289458:-1
position: 289458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:289220-289278:-1:exon

position:289220:-1
position: 289220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289278:-1
position: 289278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:289044-289095:-1:exon

position:289044:-1
position: 289044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289095:-1
position: 289095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:288852-288951:-1:exon

position:288852:-1
position: 288852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288951:-1
position: 288951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:288280-288370:-1:exon

position:288280:-1
position: 288280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288370:-1
position: 288370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:287944-288078:-1:exon

position:287944:-1
position: 287944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288078:-1
position: 288078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:287807-287859:-1:exon

position:287807:-1
position: 287807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287859:-1
position: 287859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:287536-287599:-1:exon

position:287536:-1
position: 287536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287599:-1
position: 287599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:287316-287442:-1:exon

position:287316:-1
position: 287316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287442:-1
position: 287442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:287129-287205:-1:exon

position:287129:-1
position: 287129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287205:-1
position: 287205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:286660-286707:-1:exon

position:286660:-1
position: 286660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286707:-1
position: 286707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:286452-286572:-1:exon

position:286572:-1
position: 286572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A
translation: MSRARRVPGRGAAMARQMGLLADPGAGGSPGDPGGDGDAALEAELLLLLRGREAPEGGEPPPPPQQDLAAVEALAQLCLRDPLEEEEEEEGEEELENEEELLAELQEVLEEGSGSVAAAETPQEPTDAGALLAELSERAELYRAALRNAAAENGNGARLRRLQRGLKTLEQMLESIRSGKQIDKAEIPPPVALGKGGVAPVPPPSVSPEPQAQPPAPPQPPPAPDPCPDPCPDPGSVPALRVRLQELQKEALAAKRCGDTATALGHYRAAKRLEAQLEALGQGQVPPAPDPQPEEPKAPLPRDSPTRDPPGTSPAPPATEPPRAPRDVREALEQRMERYRVAAAQAKDSGDGRKARMHERIVKQYQAAIRAHSAGKAVDLSELPVPPGFPPIQGTEIASEPSISGMLEAALRLAGPEEEEKEEEEEEGGGTKGAKPSAPCGPPPKQPPPPRNSQTAPKPAGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGIEGLIGAARGGLPVDIAQVPEVPLDGAEFELGPGRGVPMPPEAAKTFLQLAGALRRQHQMCLTYSRQFAQLGNISETTRCEALAEECRRHMETLRREHSRGGPPPKPRYEQRTFSVVKMFPELSSSDLELGIERGIGLPVPPGVAPGDLDTFVRFEFPHPSAEEAQRDKTNVVKNTDCPEFRARFRLRLLRGHRGLRRLLSSRGIKFEVTQKGGLFRPERALGSAQLRLEGLEGACELREQLQLLDGRRRTGGQLEVWVRIREPLGAQRQLEPRSERWLVLEPGAEATVAVPKPSVAAPKKDPSNRSVPTFPSLSLLLFDRERLERKMVPFGRAGCPVPPELRQQHQDLLRRIQGLRTRLQGGDPRFRTEYTEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELQKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: complement(join(286552..286572,286660..286707,287129..287205,287316..287442,287536..287599,287807..287859,287944..288078,288280..288370,288852..288951,289044..289095,289220..289278,289385..289458,289545..289661,289795..289853,290106..290228,290444..290616,290699..290780,290881..291023,291110..291182,291433..291563,291647..291736,291843..291897,291989..292300,292734..292865,292944..293006,293091..293197,293287..293434,293601..293651))
location: region:286552-293651:-1
so has part: feature:293601-293651:-1:exon
so has part: feature:293287-293434:-1:exon
so has part: feature:293091-293197:-1:exon
so has part: feature:292944-293006:-1:exon
so has part: feature:292734-292865:-1:exon
so has part: feature:291989-292300:-1:exon
so has part: feature:291843-291897:-1:exon
so has part: feature:291647-291736:-1:exon
so has part: feature:291433-291563:-1:exon
so has part: feature:291110-291182:-1:exon
so has part: feature:290881-291023:-1:exon
so has part: feature:290699-290780:-1:exon
so has part: feature:290444-290616:-1:exon
so has part: feature:290106-290228:-1:exon
so has part: feature:289795-289853:-1:exon
so has part: feature:289545-289661:-1:exon
so has part: feature:289385-289458:-1:exon
so has part: feature:289220-289278:-1:exon
so has part: feature:289044-289095:-1:exon
so has part: feature:288852-288951:-1:exon
so has part: feature:288280-288370:-1:exon
so has part: feature:287944-288078:-1:exon
so has part: feature:287807-287859:-1:exon
so has part: feature:287536-287599:-1:exon
so has part: feature:287316-287442:-1:exon
so has part: feature:287129-287205:-1:exon
so has part: feature:286660-286707:-1:exon
so has part: feature:286552-286572:-1:exon

XP_048145774.1
type: Protein
SIO_000068: ncbiprotein

position:286552:-1
position: 286552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293651:-1
position: 293651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293601-293651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293287-293434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293091-293197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292944-293006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292734-292865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291989-292300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291843-291897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291647-291736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291433-291563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291110-291182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290881-291023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290699-290780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290444-290616:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:290106-290228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289795-289853:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289545-289661:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:289385-289458:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:289220-289278:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:289044-289095:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:288852-288951:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:288280-288370:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287944-288078:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:287807-287859:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:287536-287599:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:287316-287442:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:287129-287205:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:286660-286707:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:286552-286572:-1:exon

BRME1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294062..296728
location: region:294062-296728:1
so has part: feature:294062-296728:1:exon
subclass of: SO_0000010

125318890
type: Gene
SIO_000068: ncbigene

position:294062:1
position: 294062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296728:1
position: 296728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294062-296728:1:exon

BRME1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: BRME1
product: break repair meiotic recombinase recruitment factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289819.1
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: join(294062..294191,294472..294513,294623..294758,294841..294910,294994..296046,296194..296288,296386..296460,296538..296728)
location: region:294062-296728:1
so has part: feature:294062-294191:1:exon
so has part: feature:294472-294513:1:exon
so has part: feature:294623-294758:1:exon
so has part: feature:294841-294910:1:exon
so has part: feature:294994-296046:1:exon
so has part: feature:296194-296288:1:exon
so has part: feature:296386-296460:1:exon
so has part: feature:296538-296728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294062-294191:1:exon

position:294191:1
position: 294191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294472-294513:1:exon

position:294472:1
position: 294472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294513:1
position: 294513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294623-294758:1:exon

position:294623:1
position: 294623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294758:1
position: 294758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294841-294910:1:exon

position:294841:1
position: 294841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294910:1
position: 294910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294994-296046:1:exon

position:294994:1
position: 294994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296046:1
position: 296046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:296194-296288:1:exon

position:296194:1
position: 296194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296288:1
position: 296288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:296386-296460:1:exon

position:296386:1
position: 296386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296460:1
position: 296460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296538-296728:1:exon

position:296538:1
position: 296538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRME1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: break repair meiotic recombinase recruitment factor 1
translation: MGKRRTHPLPGNMKFHAPKAKRILQEAPGAAGSAVPVPSQSNNPDGDPAGMDPQASKNSSGKVDPEGIHVEEHGARALQEGRDKGIGGGRAPGSPKQRISDGMGENHLELPQLGILEADGTGEDELESLKLGILDGAGEDDLESPKPGIWDRAGENCPESPKPAILEVDGAGEEPPASVKHVILDGMGQNYLESYQLGILEGDGAGEEQLKSPQLRTPEADGAGEEQLESLKLGILDGTGEDQLESPKPRLSEVDGAAEEQLETPTHGILDGAGEERPESVKPGISEVDRAREEQLKPLKQGIWDGAGENQLESPKQGNSGAQGSSPEDTVKDTAPAASSEVPDAAGEGEKGALEEGCGTGIALSMDTGSLDCPRDPQSGGGDTESRNCESGNAEGGNSSVVTLGLDPAATSTEPQDHREGTSPELPVEKPFPDAAGQQPWDTRGQIHTGSMGNSPVQPWESSARATEPADATDVIRGLIRELSDLNRLAMGAYRGLELLRRQKPRRGRRPVPSGSHWKEG
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: join(294483..294513,294623..294758,294841..294910,294994..296046,296194..296288,296386..296460,296538..296643)
location: region:294483-296643:1
so has part: feature:294483-294513:1:exon
so has part: feature:294623-294758:1:exon
so has part: feature:294841-294910:1:exon
so has part: feature:294994-296046:1:exon
so has part: feature:296194-296288:1:exon
so has part: feature:296386-296460:1:exon
so has part: feature:296538-296643:1:exon

XP_048145776.1
type: Protein
SIO_000068: ncbiprotein

position:294483:1
position: 294483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296643:1
position: 296643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294483-294513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294623-294758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294841-294910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294994-296046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296194-296288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296386-296460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296538-296643:1:exon

NANOS3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296649..300252)
location: region:296649-300252:-1
so has part: feature:296649-300252:-1:exon
subclass of: SO_0000010

125318891
type: Gene
SIO_000068: ncbigene

position:296649:-1
position: 296649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300252:-1
position: 300252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296649-300252:-1:exon

NANOS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: NANOS3
product: nanos C2HC-type zinc finger 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289820.1
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: complement(join(296649..297222,297833..300252))
location: region:296649-300252:-1
so has part: feature:297833-300252:-1:exon
so has part: feature:296649-297222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297833-300252:-1:exon

position:297833:-1
position: 297833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296649-297222:-1:exon

position:297222:-1
position: 297222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NANOS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nanos homolog 3
translation: MRALRYPTPHRTGSTESTEIPIPLQCTEPTGQFDMWRDYLGLAAMVSALLRDPAGLEDRSPPLGPLAPCAGPAPCAGPAPCAGPAPCAETAPRAGLALCSFCKHNGEAPAVYRSHSLRDAHGRLQCPVLRSYVCPQCGATQDRAHTRRFCPRTHRGYTSVYSRPVCPRSAGRRQGNTRM
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: complement(297866..298405)
location: region:297866-298405:-1
so has part: feature:297866-298405:-1:exon

XP_048145777.1
type: Protein
SIO_000068: ncbiprotein

position:297866:-1
position: 297866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298405:-1
position: 298405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297866-298405:-1:exon

C32H19orf53
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: C32H19orf53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(308627..309616)
location: region:308627-309616:-1
so has part: feature:308627-309616:-1:exon
subclass of: SO_0000010

125318892
type: Gene
SIO_000068: ncbigene

position:308627:-1
position: 308627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309616:-1
position: 309616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308627-309616:-1:exon

C32H19orf53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: C32H19orf53
product: chromosome 32 C19orf53 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289822.1
SIO_010081: C32H19orf53
subclass of: SO_0000673
so part of: C32H19orf53
location: complement(join(308627..308897,309004..309059,309350..309616))
location: region:308627-309616:-1
so has part: feature:309350-309616:-1:exon
so has part: feature:309004-309059:-1:exon
so has part: feature:308627-308897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309350-309616:-1:exon

position:309350:-1
position: 309350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309004-309059:-1:exon

position:309004:-1
position: 309004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309059:-1
position: 309059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308627-308897:-1:exon

position:308897:-1
position: 308897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H19orf53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: C32H19orf53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leydig cell tumor 10 kDa protein homolog
translation: MAQGRPKVAAKRPKAAAAAAARGTRGPRKGGRTIAPKKLRVIQQQKLKKRLEVGIRMRIERETVQRAQGGLPKKLALVTAPGPAKGKAKKGRG
SIO_010081: C32H19orf53
subclass of: SO_0000673
so part of: C32H19orf53
location: complement(join(308763..308897,309004..309059,309350..309440))
location: region:308763-309440:-1
so has part: feature:309350-309440:-1:exon
so has part: feature:309004-309059:-1:exon
so has part: feature:308763-308897:-1:exon

XP_048145779.1
type: Protein
SIO_000068: ncbiprotein

position:308763:-1
position: 308763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309440:-1
position: 309440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309350-309440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309004-309059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308763-308897:-1:exon

LOC125318934
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310477..312489)
location: region:310477-312489:-1
so has part: feature:310477-312489:-1:exon
subclass of: SO_0000010

125318934
type: Gene
SIO_000068: ncbigene

position:310477:-1
position: 310477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312489:-1
position: 312489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310477-312489:-1:exon

LOC125318934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318934
product: mRNA decay activator protein ZFP36L3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289899.1
SIO_010081: LOC125318934
subclass of: SO_0000673
so part of: LOC125318934
location: complement(join(310477..311856,312109..312489))
location: region:310477-312489:-1
so has part: feature:312109-312489:-1:exon
so has part: feature:310477-311856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312109-312489:-1:exon

position:312109:-1
position: 312109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310477-311856:-1:exon

position:311856:-1
position: 311856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125318934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA decay activator protein ZFP36L3-like
translation: MPRCIPAGFAAARPRCIPSGFAAARPRYIPAGFAGVRPRCIPAGFAATRPRCIPAGFAAKTPRYIPAGFAAARPRCIPAGFAAAVTPRCIPAGFAAVTPRCIPLGFAAATPRYIPAGFAAARPRYIPAGFAAVTPRYIPAGFAAARPRCIPAGSAAQTPRCMPLGFAAAMPRCIPLGFAAVTPRGIPTVFAAIKPRYIPAGFAAVTPRYIPTGFAAARPRYIPAGFAAKTPRYIPAGFATIKPRYIPAGFAAATPRYIPTGFAAAVTPRCIPAGSAAARPRCIPAGFAAAKPRYIPAGFAAARPRCIPGALRQLGLGISH
SIO_010081: LOC125318934
subclass of: SO_0000673
so part of: LOC125318934
location: complement(join(311132..311856,312109..312346))
location: region:311132-312346:-1
so has part: feature:312109-312346:-1:exon
so has part: feature:311132-311856:-1:exon

XP_048145856.1
type: Protein
SIO_000068: ncbiprotein

position:311132:-1
position: 311132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312346:-1
position: 312346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312109-312346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311132-311856:-1:exon

MRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312578..314892)
location: region:312578-314892:-1
so has part: feature:312578-314892:-1:exon
subclass of: SO_0000010

125318933
type: Gene
SIO_000068: ncbigene

position:312578:-1
position: 312578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314892:-1
position: 314892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312578-314892:-1:exon

MRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MRI1
product: methylthioribose-1-phosphate isomerase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289898.1
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(312578..312766,313002..313226,313506..313682,313803..313975,314289..314530,314819..314892))
location: region:312578-314892:-1
so has part: feature:314819-314892:-1:exon
so has part: feature:314289-314530:-1:exon
so has part: feature:313803-313975:-1:exon
so has part: feature:313506-313682:-1:exon
so has part: feature:313002-313226:-1:exon
so has part: feature:312578-312766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314819-314892:-1:exon

position:314819:-1
position: 314819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314289-314530:-1:exon

position:314289:-1
position: 314289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314530:-1
position: 314530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313803-313975:-1:exon

position:313803:-1
position: 313803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313975:-1
position: 313975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313506-313682:-1:exon

position:313506:-1
position: 313506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313682:-1
position: 313682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313002-313226:-1:exon

position:313002:-1
position: 313002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313226:-1
position: 313226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312578-312766:-1:exon

position:312766:-1
position: 312766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MRI1
product: methylthioribose-1-phosphate isomerase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289897.1
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(312578..312766,313002..313226,313506..313682,313803..313975,314289..314530,314729..314886))
location: region:312578-314886:-1
so has part: feature:314729-314886:-1:exon
so has part: feature:314289-314530:-1:exon
so has part: feature:313803-313975:-1:exon
so has part: feature:313506-313682:-1:exon
so has part: feature:313002-313226:-1:exon
so has part: feature:312578-312766:-1:exon

position:314886:-1
position: 314886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314729-314886:-1:exon

position:314729:-1
position: 314729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314289-314530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313803-313975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313506-313682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313002-313226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312578-312766:-1:exon

MRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase isoform X2
translation: MALESLRYRRGSLEVRGAPAIALLGCLSLAVELAGGAGPSDDLGALEEFVGQKLGFLLSARPTAANLGREAERLRTFVRQQVETPGVTPQQLRESIIEYIEGLLEKDRRDNRNIGAHGASDILGRVPGGGPVTLLTHCNTGTLATAGYGTALGVVRALHQRGSLSRVFCTETRPYNQGSRLSALELRHDGIPVTIIADSAAAVTMRERGVQAVVVGADRVAANGDVANKIGTFQLAVAARHMEIPFYVAAPSSTCDPTLASGRLIPIEERPGTELTQLGGVLLADPDVDVWNPAFDVTPHELITGGIITEWGVFAPSEVCRALAERGEQ
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(312636..312766,313002..313226,313506..313682,313803..313975,314289..314530,314819..314860))
location: region:312636-314860:-1
so has part: feature:314819-314860:-1:exon
so has part: feature:314289-314530:-1:exon
so has part: feature:313803-313975:-1:exon
so has part: feature:313506-313682:-1:exon
so has part: feature:313002-313226:-1:exon
so has part: feature:312636-312766:-1:exon

XP_048145855.1
type: Protein
SIO_000068: ncbiprotein

position:312636:-1
position: 312636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314860:-1
position: 314860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314819-314860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314289-314530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313803-313975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313506-313682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313002-313226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312636-312766:-1:exon

MRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase isoform X1
translation: MALESLRYRRGSLEVLNQRLLPGQLRYERVGGVERAWGAIRDMEVRGAPAIALLGCLSLAVELAGGAGPSDDLGALEEFVGQKLGFLLSARPTAANLGREAERLRTFVRQQVETPGVTPQQLRESIIEYIEGLLEKDRRDNRNIGAHGASDILGRVPGGGPVTLLTHCNTGTLATAGYGTALGVVRALHQRGSLSRVFCTETRPYNQGSRLSALELRHDGIPVTIIADSAAAVTMRERGVQAVVVGADRVAANGDVANKIGTFQLAVAARHMEIPFYVAAPSSTCDPTLASGRLIPIEERPGTELTQLGGVLLADPDVDVWNPAFDVTPHELITGGIITEWGVFAPSEVCRALAERGEQ
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(312636..312766,313002..313226,313506..313682,313803..313975,314289..314530,314729..314860))
location: region:312636-314860:-1
so has part: feature:314729-314860:-1:exon
so has part: feature:314289-314530:-1:exon
so has part: feature:313803-313975:-1:exon
so has part: feature:313506-313682:-1:exon
so has part: feature:313002-313226:-1:exon
so has part: feature:312636-312766:-1:exon

XP_048145854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314729-314860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314289-314530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313803-313975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313506-313682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313002-313226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312636-312766:-1:exon

YJU2B
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314924..317773)
location: region:314924-317773:-1
so has part: feature:314924-317773:-1:exon
subclass of: SO_0000010

125318935
type: Gene
SIO_000068: ncbigene

position:314924:-1
position: 314924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317773:-1
position: 317773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314924-317773:-1:exon

YJU2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: YJU2B
product: YJU2 splicing factor homolog B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048289900.1
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: complement(join(314924..315505,315597..315735,315924..316122,316286..316416,316496..316556,316661..316716,316802..316884,317149..317202,317310..317773))
location: region:314924-317773:-1
so has part: feature:317310-317773:-1:exon
so has part: feature:317149-317202:-1:exon
so has part: feature:316802-316884:-1:exon
so has part: feature:316661-316716:-1:exon
so has part: feature:316496-316556:-1:exon
so has part: feature:316286-316416:-1:exon
so has part: feature:315924-316122:-1:exon
so has part: feature:315597-315735:-1:exon
so has part: feature:314924-315505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317310-317773:-1:exon

position:317310:-1
position: 317310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317149-317202:-1:exon

position:317149:-1
position: 317149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317202:-1
position: 317202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316802-316884:-1:exon

position:316802:-1
position: 316802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316884:-1
position: 316884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316661-316716:-1:exon

position:316661:-1
position: 316661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316716:-1
position: 316716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316496-316556:-1:exon

position:316496:-1
position: 316496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316556:-1
position: 316556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316286-316416:-1:exon

position:316286:-1
position: 316286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316416:-1
position: 316416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315924-316122:-1:exon

position:315924:-1
position: 315924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316122:-1
position: 316122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:315597-315735:-1:exon

position:315597:-1
position: 315597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315735:-1
position: 315735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314924-315505:-1:exon

position:315505:-1
position: 315505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YJU2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: YJU2B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable splicing factor YJU2B
translation: MGERKGTNKYYPPDFDPAKHGSLNKYHHSHPLRERARKLSQGILVIRFEMPFNIWCDGCQNHIGMGVRYNAEKKKVGTYYTTPVYRFRMKCHLCVNYIELQTDPGNCDYVIVSGARRKEERWDPRGQRPAAGNGVPTAPEQRERLAMDPMFRLEHGGDRPGSWSAPPPTLTRLQEAQDAWKDDFGLNSRLRRRFREEKKTLREEEEEAAALRARAGLSIPLLREEEEDRRLAALLTLRAPDSYEEKQRLKRSEISQRSWFAQGTARAGGGGPPETGSGDGASAEGTPGPPPRPPPGSASCGGGRGRTAGVRRGRPGGTPRPGRTRPVPPPRLGEPPRAPPVPPPPRPSSPTTRTPAPRAPERGFGGLDPRPPGLVWGGAEPPAHPQRPPPPPPPCNLYPRAAQH
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: complement(join(315015..315505,315597..315735,315924..316122,316286..316416,316496..316556,316661..316716,316802..316884,317149..317202,317310..317312))
location: region:315015-317312:-1
so has part: feature:317310-317312:-1:exon
so has part: feature:317149-317202:-1:exon
so has part: feature:316802-316884:-1:exon
so has part: feature:316661-316716:-1:exon
so has part: feature:316496-316556:-1:exon
so has part: feature:316286-316416:-1:exon
so has part: feature:315924-316122:-1:exon
so has part: feature:315597-315735:-1:exon
so has part: feature:315015-315505:-1:exon

XP_048145857.1
type: Protein
SIO_000068: ncbiprotein

position:315015:-1
position: 315015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317312:-1
position: 317312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317310-317312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317149-317202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316802-316884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316661-316716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316496-316556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316286-316416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315924-316122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315597-315735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315015-315505:-1:exon

CACNA1A
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CACNA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320301..345346
location: region:320301-345346:1
so has part: feature:320301-345346:1:exon
subclass of: SO_0000010

125318923
type: Gene
SIO_000068: ncbigene

position:320301:1
position: 320301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345346:1
position: 345346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320301-345346:1:exon

CACNA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CACNA1A
product: calcium voltage-gated channel subunit alpha1 A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 6 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_048289879.1
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: join(320301..321229,324364..324469,325052..325191,326631..326722,326833..326985,327753..327940,328374..328477,328558..328673,329286..329342,329460..329549,329801..330010,330468..330580,330751..330863,330986..331117,331233..331305,331393..331510,331618..331685,331783..331889,332286..333016,333194..333556,333847..333988,334070..334199,334518..334576,334650..334755,335683..335783,335875..336036,336104..336244,336336..336537,336621..336786,337059..337168,337459..337542,337635..337752,337833..337898,337994..338094,338332..338482,338669..338796,341209..341305,342894..342999,343528..343638,343721..343822,344094..344185,344258..344399,344614..344724,345311..345346)
location: region:320301-345346:1
so has part: feature:320301-321229:1:exon
so has part: feature:324364-324469:1:exon
so has part: feature:325052-325191:1:exon
so has part: feature:326631-326722:1:exon
so has part: feature:326833-326985:1:exon
so has part: feature:327753-327940:1:exon
so has part: feature:328374-328477:1:exon
so has part: feature:328558-328673:1:exon
so has part: feature:329286-329342:1:exon
so has part: feature:329460-329549:1:exon
so has part: feature:329801-330010:1:exon
so has part: feature:330468-330580:1:exon
so has part: feature:330751-330863:1:exon
so has part: feature:330986-331117:1:exon
so has part: feature:331233-331305:1:exon
so has part: feature:331393-331510:1:exon
so has part: feature:331618-331685:1:exon
so has part: feature:331783-331889:1:exon
so has part: feature:332286-333016:1:exon
so has part: feature:333194-333556:1:exon
so has part: feature:333847-333988:1:exon
so has part: feature:334070-334199:1:exon
so has part: feature:334518-334576:1:exon
so has part: feature:334650-334755:1:exon
so has part: feature:335683-335783:1:exon
so has part: feature:335875-336036:1:exon
so has part: feature:336104-336244:1:exon
so has part: feature:336336-336537:1:exon
so has part: feature:336621-336786:1:exon
so has part: feature:337059-337168:1:exon
so has part: feature:337459-337542:1:exon
so has part: feature:337635-337752:1:exon
so has part: feature:337833-337898:1:exon
so has part: feature:337994-338094:1:exon
so has part: feature:338332-338482:1:exon
so has part: feature:338669-338796:1:exon
so has part: feature:341209-341305:1:exon
so has part: feature:342894-342999:1:exon
so has part: feature:343528-343638:1:exon
so has part: feature:343721-343822:1:exon
so has part: feature:344094-344185:1:exon
so has part: feature:344258-344399:1:exon
so has part: feature:344614-344724:1:exon
so has part: feature:345311-345346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320301-321229:1:exon

position:321229:1
position: 321229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324364-324469:1:exon

position:324364:1
position: 324364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324469:1
position: 324469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325052-325191:1:exon

position:325052:1
position: 325052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325191:1
position: 325191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326631-326722:1:exon

position:326631:1
position: 326631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326722:1
position: 326722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326833-326985:1:exon

position:326833:1
position: 326833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326985:1
position: 326985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327753-327940:1:exon

position:327753:1
position: 327753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327940:1
position: 327940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328374-328477:1:exon

position:328374:1
position: 328374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328477:1
position: 328477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328558-328673:1:exon

position:328558:1
position: 328558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328673:1
position: 328673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329286-329342:1:exon

position:329286:1
position: 329286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329342:1
position: 329342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329460-329549:1:exon

position:329460:1
position: 329460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329549:1
position: 329549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:329801-330010:1:exon

position:329801:1
position: 329801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330010:1
position: 330010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:330468-330580:1:exon

position:330468:1
position: 330468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330580:1
position: 330580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:330751-330863:1:exon

position:330751:1
position: 330751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330863:1
position: 330863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:330986-331117:1:exon

position:330986:1
position: 330986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331117:1
position: 331117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:331233-331305:1:exon

position:331233:1
position: 331233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331305:1
position: 331305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:331393-331510:1:exon

position:331393:1
position: 331393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331510:1
position: 331510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:331618-331685:1:exon

position:331618:1
position: 331618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331685:1
position: 331685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:331783-331889:1:exon

position:331783:1
position: 331783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331889:1
position: 331889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:332286-333016:1:exon

position:332286:1
position: 332286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333016:1
position: 333016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:333194-333556:1:exon

position:333194:1
position: 333194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333556:1
position: 333556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:333847-333988:1:exon

position:333847:1
position: 333847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333988:1
position: 333988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:334070-334199:1:exon

position:334070:1
position: 334070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334199:1
position: 334199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:334518-334576:1:exon

position:334518:1
position: 334518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334576:1
position: 334576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:334650-334755:1:exon

position:334650:1
position: 334650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334755:1
position: 334755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:335683-335783:1:exon

position:335683:1
position: 335683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335783:1
position: 335783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:335875-336036:1:exon

position:335875:1
position: 335875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336036:1
position: 336036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:336104-336244:1:exon

position:336104:1
position: 336104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336244:1
position: 336244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:336336-336537:1:exon

position:336336:1
position: 336336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336537:1
position: 336537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:336621-336786:1:exon

position:336621:1
position: 336621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336786:1
position: 336786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:337059-337168:1:exon

position:337059:1
position: 337059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337168:1
position: 337168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:337459-337542:1:exon

position:337459:1
position: 337459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337542:1
position: 337542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:337635-337752:1:exon

position:337635:1
position: 337635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337752:1
position: 337752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:337833-337898:1:exon

position:337833:1
position: 337833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337898:1
position: 337898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:337994-338094:1:exon

position:337994:1
position: 337994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338094:1
position: 338094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:338332-338482:1:exon

position:338332:1
position: 338332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338482:1
position: 338482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:338669-338796:1:exon

position:338669:1
position: 338669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338796:1
position: 338796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:341209-341305:1:exon

position:341209:1
position: 341209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341305:1
position: 341305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:342894-342999:1:exon

position:342894:1
position: 342894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342999:1
position: 342999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:343528-343638:1:exon

position:343528:1
position: 343528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343638:1
position: 343638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:343721-343822:1:exon

position:343721:1
position: 343721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343822:1
position: 343822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:344094-344185:1:exon

position:344094:1
position: 344094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344185:1
position: 344185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:344258-344399:1:exon

position:344258:1
position: 344258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344399:1
position: 344399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:344614-344724:1:exon

position:344614:1
position: 344614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344724:1
position: 344724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:345311-345346:1:exon

position:345311:1
position: 345311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CACNA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CACNA1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 6 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
translation: MARFGEEVAARYGPGGGGSGPGAAAGGRGAGGGPRQGPPGAQRLYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILASVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDEPEAEPRRPFDALRRATSKRSKTDLLSPEEGEEQLGDIAAMGSPFARASLKSAKLENATFFHKRERRMRFHIRRMVKTQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSVTMKEQQKNQKSSKSVWEQRTSELRKQNLLASREALYSELDPEERWKVPYARHLRPDMKTHXDRPLVVDPQENRNNNTNKTRPGEPPPDPRFGPLRAEELRRQQPRYPDHGGGPRPGDPSGPPPGSRRPRSSSREPEREPSQERGYAEGERPKGRHRSRDGRAGSPXPEREHRRHRGHRRGGRGGRGGRQARAAAARHRDGGRQPRGEGDGEHGDGERRRRHRHGAPPGYDGEGRREDKERRHRRRREAQPPPAPSGPTLSTTRPIQQDLGRRDPPVAEDIDNMKNNKLATAEPPAPPAVGNHTPCPSTGPPRRPPPTANPPPPENSLVVTNPXAPPTTPSKGGGKPEHTAVDIPPPFPPPPSNALVQVNRNANPEPLPRKEEEEKKEEEGDGQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFXGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGRWWPLPSLAAAKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDTYEYVLKMFNNVFTXLFSLECLLKIMAFGVLNYFRDAWNVFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDENSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTLADMYEMLRHMSPPLGLGTSCPPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAEPAQGDDRDLAQPVPPKTWTCLSPPHKSTDLTVGKIYAAMMIMGVLPAEQGQEAAGHARGAEPDAADVPAHGAAVPHPGGAPGAGRGARGGAGRAGRGHEGEPVLGHPSAPRRCSKGPAPGAPSGDTPDDVPNSRPQLPAGGDAGDA…
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: join(320945..321229,324364..324469,325052..325191,326631..326722,326833..326985,327753..327940,328374..328477,328558..328673,329286..329342,329460..329549,329801..330010,330468..330580,330751..330863,330986..331117,331233..331305,331393..331510,331618..331685,331783..331889,332286..333016,333194..333556,333847..333988,334070..334199,334518..334576,334650..334755,335683..335783,335875..336036,336104..336244,336336..336537,336621..336786,337059..337168,337459..337542,337635..337752,337833..337898,337994..338094,338332..338482,338669..338796,341209..341305,342894..342999,343528..343638,343721..343822,344094..344185,344258..344399,344614..344660)
location: region:320945-344660:1
so has part: feature:320945-321229:1:exon
so has part: feature:324364-324469:1:exon
so has part: feature:325052-325191:1:exon
so has part: feature:326631-326722:1:exon
so has part: feature:326833-326985:1:exon
so has part: feature:327753-327940:1:exon
so has part: feature:328374-328477:1:exon
so has part: feature:328558-328673:1:exon
so has part: feature:329286-329342:1:exon
so has part: feature:329460-329549:1:exon
so has part: feature:329801-330010:1:exon
so has part: feature:330468-330580:1:exon
so has part: feature:330751-330863:1:exon
so has part: feature:330986-331117:1:exon
so has part: feature:331233-331305:1:exon
so has part: feature:331393-331510:1:exon
so has part: feature:331618-331685:1:exon
so has part: feature:331783-331889:1:exon
so has part: feature:332286-333016:1:exon
so has part: feature:333194-333556:1:exon
so has part: feature:333847-333988:1:exon
so has part: feature:334070-334199:1:exon
so has part: feature:334518-334576:1:exon
so has part: feature:334650-334755:1:exon
so has part: feature:335683-335783:1:exon
so has part: feature:335875-336036:1:exon
so has part: feature:336104-336244:1:exon
so has part: feature:336336-336537:1:exon
so has part: feature:336621-336786:1:exon
so has part: feature:337059-337168:1:exon
so has part: feature:337459-337542:1:exon
so has part: feature:337635-337752:1:exon
so has part: feature:337833-337898:1:exon
so has part: feature:337994-338094:1:exon
so has part: feature:338332-338482:1:exon
so has part: feature:338669-338796:1:exon
so has part: feature:341209-341305:1:exon
so has part: feature:342894-342999:1:exon
so has part: feature:343528-343638:1:exon
so has part: feature:343721-343822:1:exon
so has part: feature:344094-344185:1:exon
so has part: feature:344258-344399:1:exon
so has part: feature:344614-344660:1:exon

XP_048145836.1
type: Protein
SIO_000068: ncbiprotein

position:320945:1
position: 320945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344660:1
position: 344660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320945-321229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324364-324469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325052-325191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326631-326722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326833-326985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327753-327940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328374-328477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328558-328673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329286-329342:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329460-329549:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329801-330010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:330468-330580:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330751-330863:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:330986-331117:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:331233-331305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:331393-331510:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331618-331685:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:331783-331889:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:332286-333016:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:333194-333556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:333847-333988:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:334070-334199:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:334518-334576:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:334650-334755:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:335683-335783:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:335875-336036:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:336104-336244:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336336-336537:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:336621-336786:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:337059-337168:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:337459-337542:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:337635-337752:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:337833-337898:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:337994-338094:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:338332-338482:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:338669-338796:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:341209-341305:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:342894-342999:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:343528-343638:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:343721-343822:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:344094-344185:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:344258-344399:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:344614-344660:1:exon

IER2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(350465..351614)
location: region:350465-351614:-1
so has part: feature:350465-351614:-1:exon
subclass of: SO_0000010

125318930
type: Gene
SIO_000068: ncbigene

position:350465:-1
position: 350465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351614:-1
position: 351614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350465-351614:-1:exon

IER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: IER2
product: immediate early response 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289893.1
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: complement(350465..351614)
location: region:350465-351614:-1
so has part: feature:350465-351614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350465-351614:-1:exon

IER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response gene 2 protein
translation: MEEAQRLLTVSVWKLYRCRLRRGGLRLHRSLQLSLLVRAARHRYLSARAAAETLPGPALPGDAACRATSDRGDLPRDPAGDPRNAWCPNRPSGDHPNRQTGDPGTDQKRGDPSENPTGDPRNAWCPNRPSADLPNRPTPRTEPRTDQKWGNPLRDWTGDPPNLPTGAPRSEWDRGCPPSRPTEDPPERPTRGQPGHTDRGPREPGRRPRDRCPRPSPVRRSPPGRAEAAQQRFCGAGAGAGTEQTGRGWRRRRRRCPRGRRGAARGRPQPPLASWSAPSGRAEPSGDPPRTRGTGSGTPRDTRNWNGDSPNWCGAPPMELNGHTRTLGAPGGALSPSPVTTALGGAPGWPCPPDPP
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: complement(350514..351584)
location: region:350514-351584:-1
so has part: feature:350514-351584:-1:exon

XP_048145850.1
type: Protein
SIO_000068: ncbiprotein

position:350514:-1
position: 350514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351584:-1
position: 351584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350514-351584:-1:exon

NACC1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: NACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352452..356625)
location: region:352452-356625:-1
so has part: feature:352452-356625:-1:exon
subclass of: SO_0000010

125318927
type: Gene
SIO_000068: ncbigene

position:352452:-1
position: 352452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356625:-1
position: 356625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352452-356625:-1:exon

NACC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: NACC1
product: nucleus accumbens associated 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_048289886.1
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: complement(join(352452..354425,354788..354885,354983..355088,355164..355342,355733..356625))
location: region:352452-356625:-1
so has part: feature:355733-356625:-1:exon
so has part: feature:355164-355342:-1:exon
so has part: feature:354983-355088:-1:exon
so has part: feature:354788-354885:-1:exon
so has part: feature:352452-354425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355733-356625:-1:exon

position:355733:-1
position: 355733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355164-355342:-1:exon

position:355164:-1
position: 355164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355342:-1
position: 355342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354983-355088:-1:exon

position:354983:-1
position: 354983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355088:-1
position: 355088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354788-354885:-1:exon

position:354788:-1
position: 354788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354885:-1
position: 354885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:352452-354425:-1:exon

position:354425:-1
position: 354425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NACC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: NACC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nucleus accumbens-associated protein 1
translation: MAQTLQMEIPNFGNSILECLNEQRLQGLFCDVSVVVKGHAFKAHRAVLAASSSYFRDLFHSSKSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHGDDTPGSEPQSPVAQTSAAQGWAAALPLVSRVKTEQGEPDGVQCTFVVKRLWDGAPKDAGGNGSRKMAKFSEAAPRPPQPPGTAAAPAPAPAPAPGAAADQTSPGGTSSAYTSDSPGSFHNEEDEEEDAGEEGSDEQYRQICNMYTMYSMMNVGPAAAEKVEALPEQPPPEPRARARLRQDLASLPAELVTQIGNRCHPKLYDEGDPAEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMAEGDSYTSFINDTGKLEPDIMGPEPPFEAGGPEPEGGPAGEGLQ
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: complement(join(354166..354425,354788..354885,354983..355088,355164..355342,355733..356603))
location: region:354166-356603:-1
so has part: feature:355733-356603:-1:exon
so has part: feature:355164-355342:-1:exon
so has part: feature:354983-355088:-1:exon
so has part: feature:354788-354885:-1:exon
so has part: feature:354166-354425:-1:exon

XP_048145843.1
type: Protein
SIO_000068: ncbiprotein

position:354166:-1
position: 354166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356603:-1
position: 356603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355733-356603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355164-355342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354983-355088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354788-354885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354166-354425:-1:exon

TRMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 357815..362717
location: region:357815-362717:1
so has part: feature:357815-362717:1:exon
subclass of: SO_0000010

125318925
type: Gene
SIO_000068: ncbigene

position:357815:1
position: 357815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362717:1
position: 362717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357815-362717:1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289885.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(357815..358203,358641..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362717)
location: region:357815-362717:1
so has part: feature:357815-358203:1:exon
so has part: feature:358641-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357815-358203:1:exon

position:358203:1
position: 358203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358641-358893:1:exon

position:358641:1
position: 358641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358893:1
position: 358893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

position:359183:1
position: 359183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359238:1
position: 359238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

position:359327:1
position: 359327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359442:1
position: 359442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

position:359523:1
position: 359523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359710:1
position: 359710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

position:360082:1
position: 360082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360197:1
position: 360197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

position:360266:1
position: 360266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360378:1
position: 360378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

position:360461:1
position: 360461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360609:1
position: 360609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

position:360682:1
position: 360682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360765:1
position: 360765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

position:360861:1
position: 360861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360930:1
position: 360930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

position:361014:1
position: 361014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361148:1
position: 361148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

position:361235:1
position: 361235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361320:1
position: 361320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

position:361535:1
position: 361535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361643:1
position: 361643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

position:361721:1
position: 361721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361797:1
position: 361797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

position:361872:1
position: 361872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361991:1
position: 361991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

position:362260:1
position: 362260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362371:1
position: 362371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362717:1:exon

position:362636:1
position: 362636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289884.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(357815..358203,358644..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362717)
location: region:357815-362717:1
so has part: feature:357815-358203:1:exon
so has part: feature:358644-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357815-358203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358644-358893:1:exon

position:358644:1
position: 358644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362717:1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289883.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(357856..358244,358644..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362717)
location: region:357856-362717:1
so has part: feature:357856-358244:1:exon
so has part: feature:358644-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362717:1:exon

position:357856:1
position: 357856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357856-358244:1:exon

position:358244:1
position: 358244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358644-358893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362717:1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289882.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(358208..358244,358641..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362717)
location: region:358208-362717:1
so has part: feature:358208-358244:1:exon
so has part: feature:358641-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362717:1:exon

position:358208:1
position: 358208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358208-358244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358641-358893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362717:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1
translation: MRGAARAAAAALRTLRRGLLLPPTMDSASPNGFATPPGSGASPEGSAGPPQGEGGTPGTGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGGSPPDPPEARDPQTPPETPRTARPGEACEGGLRVLEALAASGLRSVRFAQEVPGLRAIVASDCSARAAALMARNVARNGVGDLVTPRLADARMLMYQSKAEREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCVGCGSHHLQRLGRATSHGSGFKYSVATGPPVGPTCEFCHQRHQVGGPVWAEPLHDPAFVEGVLVALERSPGRFSTEPRLRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKRERLQDSSPAARILAVEPTLQASFALHEDANPGSRKRGLKRFPENPEAFWGPKARAKAGGDLSPSLQEKRERLQNKRRQRPDGAGLKQFPCKRFKEGSCPRGDQCCYSHEPPPAAPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(358223..358244,358641..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362701)
location: region:358223-362701:1
so has part: feature:358223-358244:1:exon
so has part: feature:358641-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362701:1:exon

XP_048145839.1
type: Protein
SIO_000068: ncbiprotein

position:358223:1
position: 358223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362701:1
position: 362701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358223-358244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358641-358893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362701:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2
translation: MRGAARAAAALRTLRRGLLLPPTMDSASPNGFATPPGSGASPEGSAGPPQGEGGTPGTGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGGSPPDPPEARDPQTPPETPRTARPGEACEGGLRVLEALAASGLRSVRFAQEVPGLRAIVASDCSARAAALMARNVARNGVGDLVTPRLADARMLMYQSKAEREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCVGCGSHHLQRLGRATSHGSGFKYSVATGPPVGPTCEFCHQRHQVGGPVWAEPLHDPAFVEGVLVALERSPGRFSTEPRLRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKRERLQDSSPAARILAVEPTLQASFALHEDANPGSRKRGLKRFPENPEAFWGPKARAKAGGDLSPSLQEKRERLQNKRRQRPDGAGLKQFPCKRFKEGSCPRGDQCCYSHEPPPAAPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(358223..358244,358644..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362701)
location: region:358223-362701:1
so has part: feature:358223-358244:1:exon
so has part: feature:358644-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362701:1:exon

XP_048145840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358223-358244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358644-358893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:362636-362701:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3
translation: MDSASPNGFATPPGSGASPEGSAGPPQGEGGTPGTGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGGSPPDPPEARDPQTPPETPRTARPGEACEGGLRVLEALAASGLRSVRFAQEVPGLRAIVASDCSARAAALMARNVARNGVGDLVTPRLADARMLMYQSKAEREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCVGCGSHHLQRLGRATSHGSGFKYSVATGPPVGPTCEFCHQRHQVGGPVWAEPLHDPAFVEGVLVALERSPGRFSTEPRLRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKRERLQDSSPAARILAVEPTLQASFALHEDANPGSRKRGLKRFPENPEAFWGPKARAKAGGDLSPSLQEKRERLQNKRRQRPDGAGLKQFPCKRFKEGSCPRGDQCCYSHEPPPAAPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(358691..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362701)
location: region:358691-362701:1
so has part: feature:358691-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362701:1:exon

XP_048145841.1
type: Protein
SIO_000068: ncbiprotein

position:358691:1
position: 358691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358691-358893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362636-362701:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3
translation: MDSASPNGFATPPGSGASPEGSAGPPQGEGGTPGTGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGGSPPDPPEARDPQTPPETPRTARPGEACEGGLRVLEALAASGLRSVRFAQEVPGLRAIVASDCSARAAALMARNVARNGVGDLVTPRLADARMLMYQSKAEREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCVGCGSHHLQRLGRATSHGSGFKYSVATGPPVGPTCEFCHQRHQVGGPVWAEPLHDPAFVEGVLVALERSPGRFSTEPRLRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKRERLQDSSPAARILAVEPTLQASFALHEDANPGSRKRGLKRFPENPEAFWGPKARAKAGGDLSPSLQEKRERLQNKRRQRPDGAGLKQFPCKRFKEGSCPRGDQCCYSHEPPPAAPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(358691..358893,359183..359238,359327..359442,359523..359710,360082..360197,360266..360378,360461..360609,360682..360765,360861..360930,361014..361148,361235..361320,361535..361643,361721..361797,361872..361991,362260..362371,362636..362701)
location: region:358691-362701:1
so has part: feature:358691-358893:1:exon
so has part: feature:359183-359238:1:exon
so has part: feature:359327-359442:1:exon
so has part: feature:359523-359710:1:exon
so has part: feature:360082-360197:1:exon
so has part: feature:360266-360378:1:exon
so has part: feature:360461-360609:1:exon
so has part: feature:360682-360765:1:exon
so has part: feature:360861-360930:1:exon
so has part: feature:361014-361148:1:exon
so has part: feature:361235-361320:1:exon
so has part: feature:361535-361643:1:exon
so has part: feature:361721-361797:1:exon
so has part: feature:361872-361991:1:exon
so has part: feature:362260-362371:1:exon
so has part: feature:362636-362701:1:exon

XP_048145842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358691-358893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359183-359238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359327-359442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359523-359710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360082-360197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360266-360378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360461-360609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360682-360765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360861-360930:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361014-361148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361235-361320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361535-361643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:361721-361797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361872-361991:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:362260-362371:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:362636-362701:1:exon

MAN2B1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(362710..369062)
location: region:362710-369062:-1
so has part: feature:362710-369062:-1:exon
subclass of: SO_0000010

125318924
type: Gene
SIO_000068: ncbigene

position:362710:-1
position: 362710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369062:-1
position: 369062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362710-369062:-1:exon

MAN2B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MAN2B1
product: mannosidase alpha class 2B member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289881.1
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(362710..362880,362958..363060,363287..363436,363509..363724,363796..363876,363968..364055,364134..364235,364320..364438,364523..364640,364723..364820,364972..365154,365229..365345,365438..365545,365628..365737,365815..365893,365991..366111,366194..366276,366345..366461,366668..366810,367116..367248,367620..367813,368020..368193,368498..368600,368952..369062))
location: region:362710-369062:-1
so has part: feature:368952-369062:-1:exon
so has part: feature:368498-368600:-1:exon
so has part: feature:368020-368193:-1:exon
so has part: feature:367620-367813:-1:exon
so has part: feature:367116-367248:-1:exon
so has part: feature:366668-366810:-1:exon
so has part: feature:366345-366461:-1:exon
so has part: feature:366194-366276:-1:exon
so has part: feature:365991-366111:-1:exon
so has part: feature:365815-365893:-1:exon
so has part: feature:365628-365737:-1:exon
so has part: feature:365438-365545:-1:exon
so has part: feature:365229-365345:-1:exon
so has part: feature:364972-365154:-1:exon
so has part: feature:364723-364820:-1:exon
so has part: feature:364523-364640:-1:exon
so has part: feature:364320-364438:-1:exon
so has part: feature:364134-364235:-1:exon
so has part: feature:363968-364055:-1:exon
so has part: feature:363796-363876:-1:exon
so has part: feature:363509-363724:-1:exon
so has part: feature:363287-363436:-1:exon
so has part: feature:362958-363060:-1:exon
so has part: feature:362710-362880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368952-369062:-1:exon

position:368952:-1
position: 368952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368498-368600:-1:exon

position:368498:-1
position: 368498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368600:-1
position: 368600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368020-368193:-1:exon

position:368020:-1
position: 368020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368193:-1
position: 368193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367620-367813:-1:exon

position:367620:-1
position: 367620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367813:-1
position: 367813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367116-367248:-1:exon

position:367116:-1
position: 367116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367248:-1
position: 367248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:366668-366810:-1:exon

position:366668:-1
position: 366668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366810:-1
position: 366810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:366345-366461:-1:exon

position:366345:-1
position: 366345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366461:-1
position: 366461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:366194-366276:-1:exon

position:366194:-1
position: 366194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366276:-1
position: 366276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:365991-366111:-1:exon

position:365991:-1
position: 365991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366111:-1
position: 366111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:365815-365893:-1:exon

position:365815:-1
position: 365815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365893:-1
position: 365893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:365628-365737:-1:exon

position:365628:-1
position: 365628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365737:-1
position: 365737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:365438-365545:-1:exon

position:365438:-1
position: 365438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365545:-1
position: 365545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:365229-365345:-1:exon

position:365229:-1
position: 365229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365345:-1
position: 365345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:364972-365154:-1:exon

position:364972:-1
position: 364972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365154:-1
position: 365154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:364723-364820:-1:exon

position:364723:-1
position: 364723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364820:-1
position: 364820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:364523-364640:-1:exon

position:364523:-1
position: 364523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364640:-1
position: 364640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:364320-364438:-1:exon

position:364320:-1
position: 364320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364438:-1
position: 364438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:364134-364235:-1:exon

position:364134:-1
position: 364134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364235:-1
position: 364235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:363968-364055:-1:exon

position:363968:-1
position: 363968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364055:-1
position: 364055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:363796-363876:-1:exon

position:363796:-1
position: 363796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363876:-1
position: 363876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:363509-363724:-1:exon

position:363509:-1
position: 363509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363724:-1
position: 363724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:363287-363436:-1:exon

position:363287:-1
position: 363287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363436:-1
position: 363436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:362958-363060:-1:exon

position:362958:-1
position: 362958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363060:-1
position: 363060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:362710-362880:-1:exon

position:362880:-1
position: 362880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAN2B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MAN2B1
product: mannosidase alpha class 2B member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289880.1
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(362710..362880,362958..363060,363287..363724,363796..363876,363968..364055,364134..364235,364320..364438,364523..364640,364723..364820,364972..365154,365229..365345,365438..365545,365628..365737,365815..365893,365991..366111,366194..366276,366345..366461,366668..366810,367116..367248,367620..367813,368020..368193,368498..368600,368952..369062))
location: region:362710-369062:-1
so has part: feature:368952-369062:-1:exon
so has part: feature:368498-368600:-1:exon
so has part: feature:368020-368193:-1:exon
so has part: feature:367620-367813:-1:exon
so has part: feature:367116-367248:-1:exon
so has part: feature:366668-366810:-1:exon
so has part: feature:366345-366461:-1:exon
so has part: feature:366194-366276:-1:exon
so has part: feature:365991-366111:-1:exon
so has part: feature:365815-365893:-1:exon
so has part: feature:365628-365737:-1:exon
so has part: feature:365438-365545:-1:exon
so has part: feature:365229-365345:-1:exon
so has part: feature:364972-365154:-1:exon
so has part: feature:364723-364820:-1:exon
so has part: feature:364523-364640:-1:exon
so has part: feature:364320-364438:-1:exon
so has part: feature:364134-364235:-1:exon
so has part: feature:363968-364055:-1:exon
so has part: feature:363796-363876:-1:exon
so has part: feature:363287-363724:-1:exon
so has part: feature:362958-363060:-1:exon
so has part: feature:362710-362880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368952-369062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368498-368600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368020-368193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367620-367813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367116-367248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366668-366810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366345-366461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366194-366276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365991-366111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:365815-365893:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:365628-365737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:365438-365545:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365229-365345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:364972-365154:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:364723-364820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:364523-364640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:364320-364438:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364134-364235:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363968-364055:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363796-363876:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363287-363724:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:362958-363060:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362710-362880:-1:exon

MAN2B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase isoform X2
translation: MGVMAVPGAAALPLLLLLIGAAAGCGYQSCPPTRPDMLNVHLVPHSHDDVGWLKTVDQYYYGVRNRDQHAGVQYILDSVVAQLVAVPSRRFVYAEVAFLARWWQQQDEATRSLVRELVQEGRLEFVGGGWCMSDEATTHYGGALEQLALGRRFLRREFGACGTPRVAWQIDPFGHARDLAASFAQMGYDGLFVGRVDHQDKWARLQRRELELLWRGSASLPPPRADIFTGILPNVYNPPPGLCWDQLCTDPPLVDGDGPERNVDSVVNSFLEAAATQARQYRTNHILMTMGSDFHYENAHLWFKNLDKLIAHTNARQANGSRVHALYSTPSCYLQELHRANLTWPLKTDDFFPYSDGPHQFWTGFFSSRPALKGYERLSSGFLQICSQLEALAGPSSRDGPYGPGDSSVLREAVAVAQHHDAVSGTERQHVANDYARQLAKGWDSCQVLVANALSLLGGTKGPFVFCNALNVSVCPLSETTAHFTVILYNPLARGVAWPVRLPVSGTSYAVSDPQGRPVASQVVPVSGVTQRLRGGAGGAPGELLFQAWAPPLGFSTFVVKQLSPRSPPKWPSGDPEPQIQNEHLRVLFDPVTGHLREIQNLAKGFSLPVFQSFYWYNASAGDALSPQASGAYIFRPNASAPIPVAKRAATRLLKTALVQELHQNFSAWCSQVLRLRPGQPYLELEWTVGPIPVADGLGKEVISRFETPLRTAGRFYTDSNGRQVLQRRRDHRPTWNLSQSEPVAGNYYPVNTRIFIKDQKVQLTVLTDRSQGGSSILDGSLELMVHRRLLNDDNRGVGEPLDEPGEDGRGLVVRGRHRLLLDTAAAAADQHRPQAQEMVTSPYVVLAPGSGPHLRQFSGLRRSLPPNLHLLSLEPRGAGSLLLRLEHLFERGESQNGSQPVTVDLTTLFSAFTITSVREMALGGDVPLQSVSRLLWTTATGTPKPPPVRRLDPRRVRLEPMEIRTFLASVRY
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(362783..362880,362958..363060,363287..363436,363509..363724,363796..363876,363968..364055,364134..364235,364320..364438,364523..364640,364723..364820,364972..365154,365229..365345,365438..365545,365628..365737,365815..365893,365991..366111,366194..366276,366345..366461,366668..366810,367116..367248,367620..367813,368020..368193,368498..368600,368952..369035))
location: region:362783-369035:-1
so has part: feature:368952-369035:-1:exon
so has part: feature:368498-368600:-1:exon
so has part: feature:368020-368193:-1:exon
so has part: feature:367620-367813:-1:exon
so has part: feature:367116-367248:-1:exon
so has part: feature:366668-366810:-1:exon
so has part: feature:366345-366461:-1:exon
so has part: feature:366194-366276:-1:exon
so has part: feature:365991-366111:-1:exon
so has part: feature:365815-365893:-1:exon
so has part: feature:365628-365737:-1:exon
so has part: feature:365438-365545:-1:exon
so has part: feature:365229-365345:-1:exon
so has part: feature:364972-365154:-1:exon
so has part: feature:364723-364820:-1:exon
so has part: feature:364523-364640:-1:exon
so has part: feature:364320-364438:-1:exon
so has part: feature:364134-364235:-1:exon
so has part: feature:363968-364055:-1:exon
so has part: feature:363796-363876:-1:exon
so has part: feature:363509-363724:-1:exon
so has part: feature:363287-363436:-1:exon
so has part: feature:362958-363060:-1:exon
so has part: feature:362783-362880:-1:exon

XP_048145838.1
type: Protein
SIO_000068: ncbiprotein

position:362783:-1
position: 362783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369035:-1
position: 369035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368952-369035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368498-368600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368020-368193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367620-367813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367116-367248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366668-366810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366345-366461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366194-366276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365991-366111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:365815-365893:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:365628-365737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:365438-365545:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365229-365345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:364972-365154:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:364723-364820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:364523-364640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:364320-364438:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364134-364235:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363968-364055:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363796-363876:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363509-363724:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:363287-363436:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362958-363060:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362783-362880:-1:exon

MAN2B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase isoform X1
translation: MGVMAVPGAAALPLLLLLIGAAAGCGYQSCPPTRPDMLNVHLVPHSHDDVGWLKTVDQYYYGVRNRDQHAGVQYILDSVVAQLVAVPSRRFVYAEVAFLARWWQQQDEATRSLVRELVQEGRLEFVGGGWCMSDEATTHYGGALEQLALGRRFLRREFGACGTPRVAWQIDPFGHARDLAASFAQMGYDGLFVGRVDHQDKWARLQRRELELLWRGSASLPPPRADIFTGILPNVYNPPPGLCWDQLCTDPPLVDGDGPERNVDSVVNSFLEAAATQARQYRTNHILMTMGSDFHYENAHLWFKNLDKLIAHTNARQANGSRVHALYSTPSCYLQELHRANLTWPLKTDDFFPYSDGPHQFWTGFFSSRPALKGYERLSSGFLQICSQLEALAGPSSRDGPYGPGDSSVLREAVAVAQHHDAVSGTERQHVANDYARQLAKGWDSCQVLVANALSLLGGTKGPFVFCNALNVSVCPLSETTAHFTVILYNPLARGVAWPVRLPVSGTSYAVSDPQGRPVASQVVPVSGVTQRLRGGAGGAPGELLFQAWAPPLGFSTFVVKQLSPRSPPKWPSGDPEPQIQNEHLRVLFDPVTGHLREIQNLAKGFSLPVFQSFYWYNASAGDALSPQASGAYIFRPNASAPIPVAKRAATRLLKTALVQELHQNFSAWCSQVLRLRPGQPYLELEWTVGPIPVADGLGKEVISRFETPLRTAGRFYTDSNGRQVLQRRRDHRPTWNLSQSEPVAGNYYPVNTRIFIKDQKVQLTVLTDRSQGGSSILDGSLELMVHRRLLNDDNRGVGEPLDEPGEDGRGLVVRGRHRLLLDTAAAAADQHRPQAQEMVTSPYVVLAPGSGPHLRQVSGEGSLGRVRWAGVSLLTAPSPQFSGLRRSLPPNLHLLSLEPRGAGSLLLRLEHLFERGESQNGSQPVTVDLTTLFSAFTITSVREMALGGDVPLQSVSRLLWTTATGTPKPPPVRRLDPRRVRLEPMEIRTFLASVRY
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(362783..362880,362958..363060,363287..363724,363796..363876,363968..364055,364134..364235,364320..364438,364523..364640,364723..364820,364972..365154,365229..365345,365438..365545,365628..365737,365815..365893,365991..366111,366194..366276,366345..366461,366668..366810,367116..367248,367620..367813,368020..368193,368498..368600,368952..369035))
location: region:362783-369035:-1
so has part: feature:368952-369035:-1:exon
so has part: feature:368498-368600:-1:exon
so has part: feature:368020-368193:-1:exon
so has part: feature:367620-367813:-1:exon
so has part: feature:367116-367248:-1:exon
so has part: feature:366668-366810:-1:exon
so has part: feature:366345-366461:-1:exon
so has part: feature:366194-366276:-1:exon
so has part: feature:365991-366111:-1:exon
so has part: feature:365815-365893:-1:exon
so has part: feature:365628-365737:-1:exon
so has part: feature:365438-365545:-1:exon
so has part: feature:365229-365345:-1:exon
so has part: feature:364972-365154:-1:exon
so has part: feature:364723-364820:-1:exon
so has part: feature:364523-364640:-1:exon
so has part: feature:364320-364438:-1:exon
so has part: feature:364134-364235:-1:exon
so has part: feature:363968-364055:-1:exon
so has part: feature:363796-363876:-1:exon
so has part: feature:363287-363724:-1:exon
so has part: feature:362958-363060:-1:exon
so has part: feature:362783-362880:-1:exon

XP_048145837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368952-369035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368498-368600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368020-368193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367620-367813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367116-367248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366668-366810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366345-366461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366194-366276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365991-366111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:365815-365893:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:365628-365737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:365438-365545:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365229-365345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:364972-365154:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:364723-364820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:364523-364640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:364320-364438:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364134-364235:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363968-364055:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363796-363876:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363287-363724:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:362958-363060:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362783-362880:-1:exon

WDR83OS
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: WDR83OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369586..370428)
location: region:369586-370428:-1
so has part: feature:369586-370428:-1:exon
subclass of: SO_0000010

125318932
type: Gene
SIO_000068: ncbigene

position:369586:-1
position: 369586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370428:-1
position: 370428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369586-370428:-1:exon

WDR83OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: WDR83OS
product: WD repeat domain 83 opposite strand
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289896.1
SIO_010081: WDR83OS
subclass of: SO_0000673
so part of: WDR83OS
location: complement(join(369586..369698,369776..369873,370120..370225,370348..370428))
location: region:369586-370428:-1
so has part: feature:370348-370428:-1:exon
so has part: feature:370120-370225:-1:exon
so has part: feature:369776-369873:-1:exon
so has part: feature:369586-369698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370348-370428:-1:exon

position:370348:-1
position: 370348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370120-370225:-1:exon

position:370120:-1
position: 370120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370225:-1
position: 370225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369776-369873:-1:exon

position:369776:-1
position: 369776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369873:-1
position: 369873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:369586-369698:-1:exon

position:369698:-1
position: 369698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR83OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: WDR83OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAT complex subunit Asterix
translation: MADPRRPGKVARYKPPATETNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWIAVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMSPPW
SIO_010081: WDR83OS
subclass of: SO_0000673
so part of: WDR83OS
location: complement(join(369632..369698,369776..369873,370120..370225,370348..370382))
location: region:369632-370382:-1
so has part: feature:370348-370382:-1:exon
so has part: feature:370120-370225:-1:exon
so has part: feature:369776-369873:-1:exon
so has part: feature:369632-369698:-1:exon

XP_048145853.1
type: Protein
SIO_000068: ncbiprotein

position:369632:-1
position: 369632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370382:-1
position: 370382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370348-370382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370120-370225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369776-369873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369632-369698:-1:exon

WDR83
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: WDR83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 370478..372254
location: region:370478-372254:1
so has part: feature:370478-372254:1:exon
subclass of: SO_0000010

125318931
type: Gene
SIO_000068: ncbigene

position:370478:1
position: 370478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372254:1
position: 372254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370478-372254:1:exon

WDR83
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: WDR83
product: WD repeat domain 83
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289894.1
SIO_010081: WDR83
subclass of: SO_0000673
so part of: WDR83
location: join(370478..370643,370794..370914,370997..371102,371190..371238,371327..371453,371527..371594,371683..371791,371870..371984,372054..372254)
location: region:370478-372254:1
so has part: feature:370478-370643:1:exon
so has part: feature:370794-370914:1:exon
so has part: feature:370997-371102:1:exon
so has part: feature:371190-371238:1:exon
so has part: feature:371327-371453:1:exon
so has part: feature:371527-371594:1:exon
so has part: feature:371683-371791:1:exon
so has part: feature:371870-371984:1:exon
so has part: feature:372054-372254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370478-370643:1:exon

position:370643:1
position: 370643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370794-370914:1:exon

position:370794:1
position: 370794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370914:1
position: 370914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370997-371102:1:exon

position:370997:1
position: 370997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371102:1
position: 371102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371190-371238:1:exon

position:371190:1
position: 371190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371238:1
position: 371238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371327-371453:1:exon

position:371327:1
position: 371327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371453:1
position: 371453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371527-371594:1:exon

position:371527:1
position: 371527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371594:1
position: 371594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371683-371791:1:exon

position:371683:1
position: 371683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371791:1
position: 371791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371870-371984:1:exon

position:371870:1
position: 371870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371984:1
position: 371984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372054-372254:1:exon

position:372054:1
position: 372054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR83
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: WDR83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain-containing protein 83
translation: MAFPRPRPAQAELPRQRVRTLQCGQGAVRAARFNADGNYCLTCGSDKTLKLWNPHKGTALRTYQGHGYEVLDAAGSFDNSQICSGGADKAVALWDVTTGQVIRKYRGHAGKVNCVQFNEEATVIVSGSIDSTVRCWDCRSRRPDPIQVLDEAKDGISSVKLSSHEILTGSVDGRVRRYDLRTGQLCSDYIGSPITSVCFSKDGQCVLAASLDSTLRLLDKDTGELLGEYTGHRSTTYRLDCVLNEQDTHVGCASEDGHVYFWNLVEGSLALSLPVGQGVVQSLAFHPRLPCLLVATQGQVTLWREDTFQPEGDPNT
SIO_010081: WDR83
subclass of: SO_0000673
so part of: WDR83
location: join(370541..370643,370794..370914,370997..371102,371190..371238,371327..371453,371527..371594,371683..371791,371870..371984,372054..372206)
location: region:370541-372206:1
so has part: feature:370541-370643:1:exon
so has part: feature:370794-370914:1:exon
so has part: feature:370997-371102:1:exon
so has part: feature:371190-371238:1:exon
so has part: feature:371327-371453:1:exon
so has part: feature:371527-371594:1:exon
so has part: feature:371683-371791:1:exon
so has part: feature:371870-371984:1:exon
so has part: feature:372054-372206:1:exon

XP_048145851.1
type: Protein
SIO_000068: ncbiprotein

position:370541:1
position: 370541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372206:1
position: 372206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370541-370643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370794-370914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370997-371102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371190-371238:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371327-371453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371527-371594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371683-371791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371870-371984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372054-372206:1:exon

DHPS
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: DHPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(372249..374568)
location: region:372249-374568:-1
so has part: feature:372249-374568:-1:exon
subclass of: SO_0000010

125318929
type: Gene
SIO_000068: ncbigene

position:372249:-1
position: 372249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374568:-1
position: 374568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372249-374568:-1:exon

DHPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DHPS
product: deoxyhypusine synthase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289892.1
SIO_010081: DHPS
subclass of: SO_0000673
so part of: DHPS
location: complement(join(372249..372600,372683..372808,372898..373001,373088..373193,373277..373363,373475..373571,373654..373775,374094..374255,374336..374568))
location: region:372249-374568:-1
so has part: feature:374336-374568:-1:exon
so has part: feature:374094-374255:-1:exon
so has part: feature:373654-373775:-1:exon
so has part: feature:373475-373571:-1:exon
so has part: feature:373277-373363:-1:exon
so has part: feature:373088-373193:-1:exon
so has part: feature:372898-373001:-1:exon
so has part: feature:372683-372808:-1:exon
so has part: feature:372249-372600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374336-374568:-1:exon

position:374336:-1
position: 374336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374094-374255:-1:exon

position:374094:-1
position: 374094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374255:-1
position: 374255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373654-373775:-1:exon

position:373654:-1
position: 373654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373775:-1
position: 373775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373475-373571:-1:exon

position:373475:-1
position: 373475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373571:-1
position: 373571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373277-373363:-1:exon

position:373277:-1
position: 373277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373363:-1
position: 373363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:373088-373193:-1:exon

position:373088:-1
position: 373088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373193:-1
position: 373193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:372898-373001:-1:exon

position:372898:-1
position: 372898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373001:-1
position: 373001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:372683-372808:-1:exon

position:372683:-1
position: 372683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372808:-1
position: 372808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372249-372600:-1:exon

position:372600:-1
position: 372600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DHPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxyhypusine synthase
translation: MAAPGEAPGEALRAVLRPSGALPAEALPVRGYDFSGGADHAALLRSFRTTGFQATSFAQAVAEIERMIAAKLEPLSAEQRERAAMAGPRPPSGCTIFLGFTSNLVSSGVRESIRYLVQHGMVDVLVTTAGGIEEDLIKCLAPTYIGDFSLRGRDLRENGINRIGNLLVPNDNYCKFEDWLMPILERMVDEQDTQGVRWTPSRMIARLGKEINNPESICYWAQKNNIPVLSPALTDGSLGDMIFFHSYKRPGLVLDIVEDLRLINTQAIFAHKTGMIILGGGLVKHHIANANLMRNGADFSVYVNTAQEFDGSDSGARPDEAVSWGKIRVDATPVKVYADASLVFPLLVAETFARSADAFPVPAGTSEV
SIO_010081: DHPS
subclass of: SO_0000673
so part of: DHPS
location: complement(join(372499..372600,372683..372808,372898..373001,373088..373193,373277..373363,373475..373571,373654..373775,374094..374255,374336..374536))
location: region:372499-374536:-1
so has part: feature:374336-374536:-1:exon
so has part: feature:374094-374255:-1:exon
so has part: feature:373654-373775:-1:exon
so has part: feature:373475-373571:-1:exon
so has part: feature:373277-373363:-1:exon
so has part: feature:373088-373193:-1:exon
so has part: feature:372898-373001:-1:exon
so has part: feature:372683-372808:-1:exon
so has part: feature:372499-372600:-1:exon

XP_048145849.1
type: Protein
SIO_000068: ncbiprotein

position:372499:-1
position: 372499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374536:-1
position: 374536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374336-374536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:374094-374255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373654-373775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373475-373571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373277-373363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373088-373193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372898-373001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372683-372808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372499-372600:-1:exon

FBXW9
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(374841..377355)
location: region:374841-377355:-1
so has part: feature:374841-377355:-1:exon
subclass of: SO_0000010

125318928
type: Gene
SIO_000068: ncbigene

position:374841:-1
position: 374841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377355:-1
position: 377355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374841-377355:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289891.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374841..375053,375172..375237,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377355))
location: region:374841-377355:-1
so has part: feature:376987-377355:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374841-375053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377355:-1:exon

position:376987:-1
position: 376987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

position:376548:-1
position: 376548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376723:-1
position: 376723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

position:376312:-1
position: 376312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376443:-1
position: 376443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

position:376107:-1
position: 376107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376219:-1
position: 376219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

position:375945:-1
position: 375945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376036:-1
position: 376036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

position:375726:-1
position: 375726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375874:-1
position: 375874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:375172-375237:-1:exon

position:375172:-1
position: 375172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375237:-1
position: 375237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:374841-375053:-1:exon

position:375053:-1
position: 375053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289890.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374841..375053,375172..375237,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377354))
location: region:374841-377354:-1
so has part: feature:376987-377354:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374841-375053:-1:exon

position:377354:-1
position: 377354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

position:375533:-1
position: 375533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375646:-1
position: 375646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374841-375053:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289888.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374841..375053,375172..375237,375359..375448,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377353))
location: region:374841-377353:-1
so has part: feature:376987-377353:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375359-375448:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374841-375053:-1:exon

position:377353:-1
position: 377353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375359-375448:-1:exon

position:375359:-1
position: 375359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375448:-1
position: 375448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374841-375053:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289889.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374841..375053,375172..375237,375359..375448,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376687,376987..377352))
location: region:374841-377352:-1
so has part: feature:376987-377352:-1:exon
so has part: feature:376548-376687:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375359-375448:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374841-375053:-1:exon

position:377352:-1
position: 377352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376687:-1:exon

position:376687:-1
position: 376687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375359-375448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374841-375053:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X2
translation: MDGPPAPAAASPAEPDGPAAGAGVPGGLLALPPELLLRICGFLRAREVRRVLPCVCRALRDVARDAVAWRLRLQRRARRPLPALPEDGFDWAAACEDLEEHLERWGAGGAPMEHFSLDEGHFASVDSVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGKVLVKALGSGRSGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLAAEGQQFGEIREKAAVLCLSYRPDVLVTGTYDKTVTVYDPRAGQAQVSSYKPHASAVLSLAADERLIVSGSEDRTLVVFDRRAGAVLQRLQLDNYLLSMSYRGSQLWAGDNQGRVYLFGSGSGGFQPARYFDVGHRLQITGLWHSLGSLYTTSTDRTLRIHVPTDPPRTICSWTHDDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374979..375053,375172..375237,375359..375448,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376687,376987..377242))
location: region:374979-377242:-1
so has part: feature:376987-377242:-1:exon
so has part: feature:376548-376687:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375359-375448:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374979-375053:-1:exon

XP_048145846.1
type: Protein
SIO_000068: ncbiprotein

position:374979:-1
position: 374979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377242:-1
position: 377242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375359-375448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374979-375053:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X4
translation: MDGPPAPAAASPAEPDGPAAGAGVPGGLLALPPELLLRICGFLRAREVRRVLPCVCRALRDVARDAVAWRLRLQRRARRPLPALPGLGTTHDFGAPPEDGFDWAAACEDLEEHLERWGAGGAPMEHFSLDEGHFASVDSVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGKVLVKALGSGRSGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLAAEGQQFGEIREKAAVLCLSYRPDVLVTGTYDKTVTVYDPRAGQAQVSSYKPHASAVLSLAADERLIVSGSEDRTLVVFDRRAGAVLQRLQIHVPTDPPRTICSWTHDDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374979..375053,375172..375237,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377242))
location: region:374979-377242:-1
so has part: feature:376987-377242:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374979-375053:-1:exon

XP_048145848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374979-375053:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X3
translation: MDGPPAPAAASPAEPDGPAAGAGVPGGLLALPPELLLRICGFLRAREVRRVLPCVCRALRDVARDAVAWRLRLQRRARRPLPALPGLGTTHDFGAPPEDGFDWAAACEDLEEHLERWGAGGAPMEHFSLDEGHFASVDSVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGKVLVKALGSGRSGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLAAEGQQFGEIREKAAVLCLSYRPDVLVTGTYDKTVTVYDPRAGQAQVSSYKPHASAVLSLAADERLIVSGSEDRTLVVFDRRAGAVLQRLQLDNYLLSMSYRGSQLWAGDNQGRVYLFGSGSGGFQPARIHVPTDPPRTICSWTHDDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374979..375053,375172..375237,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377242))
location: region:374979-377242:-1
so has part: feature:376987-377242:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374979-375053:-1:exon

XP_048145847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374979-375053:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X1
translation: MDGPPAPAAASPAEPDGPAAGAGVPGGLLALPPELLLRICGFLRAREVRRVLPCVCRALRDVARDAVAWRLRLQRRARRPLPALPGLGTTHDFGAPPEDGFDWAAACEDLEEHLERWGAGGAPMEHFSLDEGHFASVDSVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGKVLVKALGSGRSGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLAAEGQQFGEIREKAAVLCLSYRPDVLVTGTYDKTVTVYDPRAGQAQVSSYKPHASAVLSLAADERLIVSGSEDRTLVVFDRRAGAVLQRLQLDNYLLSMSYRGSQLWAGDNQGRVYLFGSGSGGFQPARYFDVGHRLQITGLWHSLGSLYTTSTDRTLRIHVPTDPPRTICSWTHDDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(374979..375053,375172..375237,375359..375448,375533..375646,375726..375874,375945..376036,376107..376219,376312..376443,376548..376723,376987..377242))
location: region:374979-377242:-1
so has part: feature:376987-377242:-1:exon
so has part: feature:376548-376723:-1:exon
so has part: feature:376312-376443:-1:exon
so has part: feature:376107-376219:-1:exon
so has part: feature:375945-376036:-1:exon
so has part: feature:375726-375874:-1:exon
so has part: feature:375533-375646:-1:exon
so has part: feature:375359-375448:-1:exon
so has part: feature:375172-375237:-1:exon
so has part: feature:374979-375053:-1:exon

XP_048145845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376987-377242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376548-376723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376312-376443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376107-376219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375945-376036:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375726-375874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375533-375646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375359-375448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:375172-375237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374979-375053:-1:exon

TNPO2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(378216..386263)
location: region:378216-386263:-1
so has part: feature:378216-386263:-1:exon
subclass of: SO_0000010

125318914
type: Gene
SIO_000068: ncbigene

position:378216:-1
position: 378216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386263:-1
position: 386263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378216-386263:-1:exon

TNPO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TNPO2
product: transportin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_048289866.1
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(378216..378325,378422..378553,378648..378722,378981..379080,379178..379253,379361..379456,379545..379643,379717..379804,379905..380063,380142..380249,380324..380410,380637..380808,381060..381285,381675..381827,382420..382588,382815..382875,382977..383095,383344..383466,383570..383651,384084..384217,384411..384517,384602..384751,384884..384959,385300..385479,386163..386263))
location: region:378216-386263:-1
so has part: feature:386163-386263:-1:exon
so has part: feature:385300-385479:-1:exon
so has part: feature:384884-384959:-1:exon
so has part: feature:384602-384751:-1:exon
so has part: feature:384411-384517:-1:exon
so has part: feature:384084-384217:-1:exon
so has part: feature:383570-383651:-1:exon
so has part: feature:383344-383466:-1:exon
so has part: feature:382977-383095:-1:exon
so has part: feature:382815-382875:-1:exon
so has part: feature:382420-382588:-1:exon
so has part: feature:381675-381827:-1:exon
so has part: feature:381060-381285:-1:exon
so has part: feature:380637-380808:-1:exon
so has part: feature:380324-380410:-1:exon
so has part: feature:380142-380249:-1:exon
so has part: feature:379905-380063:-1:exon
so has part: feature:379717-379804:-1:exon
so has part: feature:379545-379643:-1:exon
so has part: feature:379361-379456:-1:exon
so has part: feature:379178-379253:-1:exon
so has part: feature:378981-379080:-1:exon
so has part: feature:378648-378722:-1:exon
so has part: feature:378422-378553:-1:exon
so has part: feature:378216-378325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386163-386263:-1:exon

position:386163:-1
position: 386163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385300-385479:-1:exon

position:385300:-1
position: 385300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385479:-1
position: 385479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384884-384959:-1:exon

position:384884:-1
position: 384884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384959:-1
position: 384959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384602-384751:-1:exon

position:384602:-1
position: 384602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384751:-1
position: 384751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384411-384517:-1:exon

position:384411:-1
position: 384411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384517:-1
position: 384517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384084-384217:-1:exon

position:384084:-1
position: 384084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384217:-1
position: 384217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:383570-383651:-1:exon

position:383570:-1
position: 383570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383651:-1
position: 383651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:383344-383466:-1:exon

position:383344:-1
position: 383344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383466:-1
position: 383466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:382977-383095:-1:exon

position:382977:-1
position: 382977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383095:-1
position: 383095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:382815-382875:-1:exon

position:382815:-1
position: 382815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382875:-1
position: 382875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:382420-382588:-1:exon

position:382420:-1
position: 382420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382588:-1
position: 382588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:381675-381827:-1:exon

position:381675:-1
position: 381675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381827:-1
position: 381827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:381060-381285:-1:exon

position:381060:-1
position: 381060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381285:-1
position: 381285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:380637-380808:-1:exon

position:380637:-1
position: 380637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380808:-1
position: 380808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:380324-380410:-1:exon

position:380324:-1
position: 380324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380410:-1
position: 380410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:380142-380249:-1:exon

position:380142:-1
position: 380142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380249:-1
position: 380249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:379905-380063:-1:exon

position:379905:-1
position: 379905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380063:-1
position: 380063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:379717-379804:-1:exon

position:379717:-1
position: 379717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379804:-1
position: 379804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:379545-379643:-1:exon

position:379545:-1
position: 379545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379643:-1
position: 379643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:379361-379456:-1:exon

position:379361:-1
position: 379361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379456:-1
position: 379456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:379178-379253:-1:exon

position:379178:-1
position: 379178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379253:-1
position: 379253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:378981-379080:-1:exon

position:378981:-1
position: 378981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379080:-1
position: 379080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:378648-378722:-1:exon

position:378648:-1
position: 378648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378722:-1
position: 378722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:378422-378553:-1:exon

position:378422:-1
position: 378422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378553:-1
position: 378553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:378216-378325:-1:exon

position:378325:-1
position: 378325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNPO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2
translation: MDWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKNNVKAHFQSFPPPVAEFIKQECLNHLGDASSLIRATIGILITTIASKGELQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNVMIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVMLLEVRIDRLIPHMYSIIQYMLQRTQDSDENVALEACEFWLTLAEQPICKDVLTAHLVQLIPILVHGMRYSEIDIILLKGDVEEDEAVPDSDQDIKPRFHKSRTVTLAHEEQRGGDGDGDGDDEDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHLEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIRCLADRKALVRSIACWTLSRYAHWVVAQPPELYLKPLMTELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFISVCNNATWAIGEICMQMGAEMQPYVPMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWVSPKDDLRDMFYKILHGFKAQVGEENWQQFSEQFPPLLKDRLAAFYGV
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(378446..378553,378648..378722,378981..379080,379178..379253,379361..379456,379545..379643,379717..379804,379905..380063,380142..380249,380324..380410,380637..380808,381060..381285,381675..381827,382420..382588,382815..382875,382977..383095,383344..383466,383570..383651,384084..384217,384411..384517,384602..384751,384884..384959,385300..385398))
location: region:378446-385398:-1
so has part: feature:385300-385398:-1:exon
so has part: feature:384884-384959:-1:exon
so has part: feature:384602-384751:-1:exon
so has part: feature:384411-384517:-1:exon
so has part: feature:384084-384217:-1:exon
so has part: feature:383570-383651:-1:exon
so has part: feature:383344-383466:-1:exon
so has part: feature:382977-383095:-1:exon
so has part: feature:382815-382875:-1:exon
so has part: feature:382420-382588:-1:exon
so has part: feature:381675-381827:-1:exon
so has part: feature:381060-381285:-1:exon
so has part: feature:380637-380808:-1:exon
so has part: feature:380324-380410:-1:exon
so has part: feature:380142-380249:-1:exon
so has part: feature:379905-380063:-1:exon
so has part: feature:379717-379804:-1:exon
so has part: feature:379545-379643:-1:exon
so has part: feature:379361-379456:-1:exon
so has part: feature:379178-379253:-1:exon
so has part: feature:378981-379080:-1:exon
so has part: feature:378648-378722:-1:exon
so has part: feature:378446-378553:-1:exon

XP_048145823.1
type: Protein
SIO_000068: ncbiprotein

position:378446:-1
position: 378446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385398:-1
position: 385398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385300-385398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384884-384959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384602-384751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384411-384517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384084-384217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383570-383651:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383344-383466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:382977-383095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382815-382875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382420-382588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381675-381827:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381060-381285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380637-380808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380324-380410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:380142-380249:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379905-380063:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379717-379804:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:379545-379643:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:379361-379456:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:379178-379253:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:378981-379080:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:378648-378722:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:378446-378553:-1:exon

TRIR
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(386848..388857)
location: region:386848-388857:-1
so has part: feature:386848-388857:-1:exon
subclass of: SO_0000010

125318915
type: Gene
SIO_000068: ncbigene

position:386848:-1
position: 386848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388857:-1
position: 388857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386848-388857:-1:exon

TRIR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TRIR
product: telomerase RNA component interacting RNase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289867.1
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(386848..387500,388132..388209,388562..388857))
location: region:386848-388857:-1
so has part: feature:388562-388857:-1:exon
so has part: feature:388132-388209:-1:exon
so has part: feature:386848-387500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388562-388857:-1:exon

position:388562:-1
position: 388562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388132-388209:-1:exon

position:388132:-1
position: 388132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388209:-1
position: 388209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386848-387500:-1:exon

position:387500:-1
position: 387500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase RNA component interacting RNase
translation: MAARGEDREAPEAPSPPPPGPGGGVNVFANDGSFLELFKRKMEAEEQQREREAAAAAEASGGGGTGLGPQRGADGAKRSGGALSFVGRRRGGNKLALKTGVVAKKQKTDEEVLTSKGDAWAKYLAEVQKYKAHQCSDDDKTRPLVK
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(387393..387500,388132..388209,388562..388816))
location: region:387393-388816:-1
so has part: feature:388562-388816:-1:exon
so has part: feature:388132-388209:-1:exon
so has part: feature:387393-387500:-1:exon

XP_048145824.1
type: Protein
SIO_000068: ncbiprotein

position:387393:-1
position: 387393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388816:-1
position: 388816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388562-388816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388132-388209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387393-387500:-1:exon

GET3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389063..391953
location: region:389063-391953:1
so has part: feature:389063-391953:1:exon
subclass of: SO_0000010

125318937
type: Gene
SIO_000068: ncbigene

position:389063:1
position: 389063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391953:1
position: 391953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389063-391953:1:exon

GET3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: GET3
product: guided entry of tail-anchored proteins factor 3, ATPase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289902.1
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(389063..389238,389659..389806,389877..390025,390171..390321,390395..390502,391091..391288,391799..391953)
location: region:389063-391953:1
so has part: feature:389063-389238:1:exon
so has part: feature:389659-389806:1:exon
so has part: feature:389877-390025:1:exon
so has part: feature:390171-390321:1:exon
so has part: feature:390395-390502:1:exon
so has part: feature:391091-391288:1:exon
so has part: feature:391799-391953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389063-389238:1:exon

position:389238:1
position: 389238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389659-389806:1:exon

position:389659:1
position: 389659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389806:1
position: 389806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389877-390025:1:exon

position:389877:1
position: 389877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390025:1
position: 390025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:390171-390321:1:exon

position:390171:1
position: 390171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390321:1
position: 390321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390395-390502:1:exon

position:390395:1
position: 390395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390502:1
position: 390502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:391091-391288:1:exon

position:391091:1
position: 391091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391288:1
position: 391288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391799-391953:1:exon

position:391799:1
position: 391799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GET3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase GET3
translation: MAAAAAGGWAAEAPEEFEDAPDVEPLEPTLANIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSRVRESVLIISTDPAHNISDAFDQKFSKVPTKVTGYDNLFAMEIDPSLGVAELPDEFFEEDNVLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCRIDTHNIVVNQLVFPDPLRPCRMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGGDKVNTFSSLLLDPYQPPSPK
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(389072..389238,389659..389806,389877..390025,390171..390321,390395..390502,391091..391288,391799..391930)
location: region:389072-391930:1
so has part: feature:389072-389238:1:exon
so has part: feature:389659-389806:1:exon
so has part: feature:389877-390025:1:exon
so has part: feature:390171-390321:1:exon
so has part: feature:390395-390502:1:exon
so has part: feature:391091-391288:1:exon
so has part: feature:391799-391930:1:exon

XP_048145859.1
type: Protein
SIO_000068: ncbiprotein

position:389072:1
position: 389072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391930:1
position: 391930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389072-389238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389659-389806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389877-390025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390171-390321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390395-390502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391091-391288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391799-391930:1:exon

BEST2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: BEST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392907..>396935
location: region:392907-396935:1
so has part: feature:392907-396935:1:exon
subclass of: SO_0000010

125318876
type: Gene
SIO_000068: ncbigene

position:392907:1
position: 392907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396935:1
position: 396935
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392907-396935:1:exon

BEST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: BEST2
product: bestrophin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048289798.1
SIO_010081: BEST2
subclass of: SO_0000673
so part of: BEST2
location: join(392907..392924,393372..393573,393804..393898,394129..394362,394864..395018,395401..395478,395705..395857,395951..396031,396123..396274,396587..>396935)
location: region:392907-396935:1
so has part: feature:392907-392924:1:exon
so has part: feature:393372-393573:1:exon
so has part: feature:393804-393898:1:exon
so has part: feature:394129-394362:1:exon
so has part: feature:394864-395018:1:exon
so has part: feature:395401-395478:1:exon
so has part: feature:395705-395857:1:exon
so has part: feature:395951-396031:1:exon
so has part: feature:396123-396274:1:exon
so has part: feature:396587-396935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392907-392924:1:exon

position:392924:1
position: 392924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393372-393573:1:exon

position:393372:1
position: 393372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393573:1
position: 393573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393804-393898:1:exon

position:393804:1
position: 393804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393898:1
position: 393898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:394129-394362:1:exon

position:394129:1
position: 394129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394362:1
position: 394362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:394864-395018:1:exon

position:394864:1
position: 394864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395018:1
position: 395018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:395401-395478:1:exon

position:395401:1
position: 395401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395478:1
position: 395478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:395705-395857:1:exon

position:395705:1
position: 395705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395857:1
position: 395857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:395951-396031:1:exon

position:395951:1
position: 395951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396031:1
position: 396031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:396123-396274:1:exon

position:396123:1
position: 396123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396274:1
position: 396274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:396587-396935:1:exon

position:396587:1
position: 396587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BEST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: BEST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bestrophin-2
translation: MTVTYTSRVATARFGGFSQLLLLWRGSIYKLLYRELLLFLAAYLGLSLAYRFLLSEAQRRLFEKLVLYCDKSANLIPVSFVLGFYVALVLERWWGQFRTVPAPDGLMVAVAGSVHGADARGRLLRRTLLRYGSLAALLVLRAVSTPVYKRFPTTDHLVQAGFLTREERRRLEGLRSPYNKFWVPCAWFGALAGQARREGRVRDDCALKLLMEELNRFRAHCSLLFHYDWISVPLVYTQVVTIAVYTFFLTCLIGRQFLDPAQGYAGHELDLGVPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNTLIDRNFQVSMLAVDELYGEVPALERDRYWDAASPQAPYTAAAAPPRHPTFQGSAFDVTLAKEEMQFQPLEDIGDPLGAPPDPAPRAPPGPRRLSLLRRKSSSEGGGRPRAPPGGRGPPGPVAAAPQRRARGLTGGPQNLRPNPVRAPPIKTQRICREMIELWRRDPNSGRGLLD
SIO_010081: BEST2
subclass of: SO_0000673
so part of: BEST2
location: join(393422..393573,393804..393898,394129..394362,394864..395018,395401..395478,395705..395857,395951..396031,396123..396274,396587..>396935)
location: region:393422-396935:1
so has part: feature:393422-393573:1:exon
so has part: feature:393804-393898:1:exon
so has part: feature:394129-394362:1:exon
so has part: feature:394864-395018:1:exon
so has part: feature:395401-395478:1:exon
so has part: feature:395705-395857:1:exon
so has part: feature:395951-396031:1:exon
so has part: feature:396123-396274:1:exon
so has part: feature:396587-396935:1:exon

XP_048145755.1
type: Protein
SIO_000068: ncbiprotein

position:393422:1
position: 393422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393422-393573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393804-393898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394129-394362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:394864-395018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395401-395478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395705-395857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:395951-396031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396123-396274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396587-396935:1:exon

TIMM29
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397359..398702)
location: region:397359-398702:-1
so has part: feature:397359-398702:-1:exon
subclass of: SO_0000010

125318949
type: Gene
SIO_000068: ncbigene

position:397359:-1
position: 397359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398702:-1
position: 398702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397359-398702:-1:exon

TIMM29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TIMM29
product: translocase of inner mitochondrial membrane 29
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289917.1
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(397359..398081,398483..398702))
location: region:397359-398702:-1
so has part: feature:398483-398702:-1:exon
so has part: feature:397359-398081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398483-398702:-1:exon

position:398483:-1
position: 398483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397359-398081:-1:exon

position:398081:-1
position: 398081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim29
translation: MRSHAPPRAAMVPPVLRDPVRVPPAPQPRRFGSPAPLGPGAELPPVMAAAAAAAAAAGGGSRGLWGRLGDTRLGRWCRALLQDYSTSLREAAAGARRRPAATAAALGVLGVSAALASSVPDLESLESAAVAAGATLGQLPPGSRSPRAERHVLRLLRLRERGRIRVRSLGLVAVAGASPHGSDPALYSALCPHLRPRPRDFGALLLDVGFLGRWWLLERALRDCDVNEEEFRHLPEPLRRLDPRDLRSERNERLHRERLRPVVLSEAEIGGDGVG
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(397474..398081,398483..398702))
location: region:397474-398702:-1
so has part: feature:398483-398702:-1:exon
so has part: feature:397474-398081:-1:exon

XP_048145874.1
type: Protein
SIO_000068: ncbiprotein

position:397474:-1
position: 397474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398483-398702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397474-398081:-1:exon

SPC24
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SPC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 398692..400485
location: region:398692-400485:1
so has part: feature:398692-400485:1:exon
subclass of: SO_0000010

125318950
type: Gene
SIO_000068: ncbigene

position:398692:1
position: 398692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400485:1
position: 400485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398692-400485:1:exon

SPC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SPC24
product: SPC24 component of NDC80 kinetochore complex
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289918.1
SIO_010081: SPC24
subclass of: SO_0000673
so part of: SPC24
location: join(398692..398774,399192..399363,399661..399805,399928..400023,400109..400185,400267..400485)
location: region:398692-400485:1
so has part: feature:398692-398774:1:exon
so has part: feature:399192-399363:1:exon
so has part: feature:399661-399805:1:exon
so has part: feature:399928-400023:1:exon
so has part: feature:400109-400185:1:exon
so has part: feature:400267-400485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398692-398774:1:exon

position:398774:1
position: 398774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399192-399363:1:exon

position:399192:1
position: 399192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399363:1
position: 399363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399661-399805:1:exon

position:399661:1
position: 399661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399805:1
position: 399805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399928-400023:1:exon

position:399928:1
position: 399928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400023:1
position: 400023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:400109-400185:1:exon

position:400109:1
position: 400109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400185:1
position: 400185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:400267-400485:1:exon

position:400267:1
position: 400267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SPC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinetochore protein Spc24
translation: MGTADAAPLEELEELSQELLRELSSGCTEELLRRGLERREHLETRLLETQGKARDIAKDLAEAEAKVFQRLQDVQADVQRLRGRSQELDTELERARGTLSSAKDKTQALRLALEELQEQLRQLEQHKEDKEDPSLPPDAYVAQVYYEISRIDWDCSAGPGRIRGIHYGPDIAVPLDMDEEQHSGTFISDYLWGLVPTEWRPRRPPVLPREPLSP
SIO_010081: SPC24
subclass of: SO_0000673
so part of: SPC24
location: join(398772..398774,399192..399363,399661..399805,399928..400023,400109..400185,400267..400418)
location: region:398772-400418:1
so has part: feature:398772-398774:1:exon
so has part: feature:399192-399363:1:exon
so has part: feature:399661-399805:1:exon
so has part: feature:399928-400023:1:exon
so has part: feature:400109-400185:1:exon
so has part: feature:400267-400418:1:exon

XP_048145875.1
type: Protein
SIO_000068: ncbiprotein

position:398772:1
position: 398772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400418:1
position: 400418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398772-398774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399192-399363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399661-399805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399928-400023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400109-400185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400267-400418:1:exon

KEAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400466..404573)
location: region:400466-404573:-1
so has part: feature:400466-404573:-1:exon
subclass of: SO_0000010

125318947
type: Gene
SIO_000068: ncbigene

position:400466:-1
position: 400466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404573:-1
position: 404573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400466-404573:-1:exon

KEAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: KEAP1
product: kelch like ECH associated protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289915.1
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(400466..400929,401144..401320,401725..401930,402180..402859,403026..403643,404337..404573))
location: region:400466-404573:-1
so has part: feature:404337-404573:-1:exon
so has part: feature:403026-403643:-1:exon
so has part: feature:402180-402859:-1:exon
so has part: feature:401725-401930:-1:exon
so has part: feature:401144-401320:-1:exon
so has part: feature:400466-400929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404337-404573:-1:exon

position:404337:-1
position: 404337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403026-403643:-1:exon

position:403026:-1
position: 403026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403643:-1
position: 403643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:402180-402859:-1:exon

position:402180:-1
position: 402180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402859:-1
position: 402859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401725-401930:-1:exon

position:401725:-1
position: 401725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401930:-1
position: 401930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:401144-401320:-1:exon

position:401144:-1
position: 401144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401320:-1
position: 401320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:400466-400929:-1:exon

position:400929:-1
position: 400929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KEAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like ECH-associated protein 1
translation: MSCPSPPPPECPAEVTPSPSSAGPSRYTLSEHPGAALAAMNELRLEGHLCDVTLRVRHRRDVPATELRAHRVVLAAASPVFRAMFTAGLRERGLAEVPIEGVHPRAMERLVEFAYTAAVAVGERCVLPLLHGALMYQVDAVVRACCAFLGGQLHPSNAIGIAALAERLGCLELQQKAREYIYMNFAEVSKQEEFLSLSHCQLATLVSRDELNVRCESEVFQACVAWVQQDRGARAPFLPALLRAVRCHALTPRFLRAQLRRRHDLGRDALRYLARVFRDLALHKPSRDPPGRTPKVRQLIYAAGGYLRRSLSTLEAFDPVEGSWVRLAALETPRSGLGGCAVGGLFYAVGGRNNSPEGNTDSAAVDCYNPVSGRWSPCAPMSVPRNRIGVGVIDGLIYAVGGSHGCTHHCSVERYEPERDEWALVAPMGTRRIGVGVAVLNRLLYAVGGFDGSARLRSAERYHPERDSWQPIPPMATVRSGAGVCALGNCLYAMGGYDGTQQLSSAERFEVDTETWSFVAPMGHRRSALGVTAFRGRIYVLGGYDGHSFLESVECYDPEADAWTEVTPMPSGRSGLGVAVTMEPCHPEPPPEEPPPEEPPPGGPC
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(400736..400929,401144..401320,401725..401930,402180..402859,403026..403586))
location: region:400736-403586:-1
so has part: feature:403026-403586:-1:exon
so has part: feature:402180-402859:-1:exon
so has part: feature:401725-401930:-1:exon
so has part: feature:401144-401320:-1:exon
so has part: feature:400736-400929:-1:exon

XP_048145872.1
type: Protein
SIO_000068: ncbiprotein

position:400736:-1
position: 400736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403586:-1
position: 403586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403026-403586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402180-402859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401725-401930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401144-401320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400736-400929:-1:exon

ATG4D
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404860..408191
location: region:404860-408191:1
so has part: feature:404860-408191:1:exon
subclass of: SO_0000010

125318945
type: Gene
SIO_000068: ncbigene

position:404860:1
position: 404860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408191:1
position: 408191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404860-408191:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATG4D
product: autophagy related 4D cysteine peptidase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289910.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404860..405040,405349..405432,405648..405821,405935..406505,406600..406664,406815..407104,407202..407280,407366..407442,407538..407654,407727..408191)
location: region:404860-408191:1
so has part: feature:404860-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-408191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404860-405040:1:exon

position:405040:1
position: 405040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

position:405349:1
position: 405349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405432:1
position: 405432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

position:405648:1
position: 405648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405821:1
position: 405821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406505:1:exon

position:405935:1
position: 405935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406505:1
position: 406505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

position:406600:1
position: 406600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406664:1
position: 406664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406815-407104:1:exon

position:406815:1
position: 406815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407104:1
position: 407104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407202-407280:1:exon

position:407202:1
position: 407202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407280:1
position: 407280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407366-407442:1:exon

position:407366:1
position: 407366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407442:1
position: 407442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:407538-407654:1:exon

position:407538:1
position: 407538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407654:1
position: 407654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:407727-408191:1:exon

position:407727:1
position: 407727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATG4D
product: autophagy related 4D cysteine peptidase, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289913.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404860..405040,405349..405432,405648..405821,405935..406505,406600..406664,406815..406940,407004..407104,407202..407280,407366..407442,407538..407654,407727..408191)
location: region:404860-408191:1
so has part: feature:404860-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-406940:1:exon
so has part: feature:407004-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-408191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404860-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406815-406940:1:exon

position:406940:1
position: 406940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407004-407104:1:exon

position:407004:1
position: 407004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-408191:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATG4D
product: autophagy related 4D cysteine peptidase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289911.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404860..405040,405349..405432,405648..405821,405935..406031,406062..406505,406600..406664,406815..407104,407202..407280,407366..407442,407538..407654,407727..408191)
location: region:404860-408191:1
so has part: feature:404860-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406031:1:exon
so has part: feature:406062-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-408191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404860-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406031:1:exon

position:406031:1
position: 406031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406062-406505:1:exon

position:406062:1
position: 406062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406815-407104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-408191:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATG4D
product: autophagy related 4D cysteine peptidase, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289912.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404860..405040,405349..405432,405648..405821,405955..406505,406600..406664,406837..407104,407202..407280,407366..407442,407538..407654,407727..408191)
location: region:404860-408191:1
so has part: feature:404860-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405955-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406837-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-408191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404860-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405955-406505:1:exon

position:405955:1
position: 405955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406837-407104:1:exon

position:406837:1
position: 406837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407727-408191:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATG4D
product: autophagy related 4D cysteine peptidase, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289914.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404860..405040,405349..405432,405648..405821,405955..406031,406062..406505,406600..406664,406837..407104,407202..407280,407366..407442,407538..407654,407727..408191)
location: region:404860-408191:1
so has part: feature:404860-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405955-406031:1:exon
so has part: feature:406062-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406837-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-408191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404860-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405955-406031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406062-406505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406837-407104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-408191:1:exon

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D isoform X1
translation: MSGGGEGPGPPPGPAPGSAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWFTYRSGFPALPGTPRTTDCGWGCTLRSAQMLLGQGLVLHLLGRVSPTPFQTGRGRRRCWNWNRGGPGGAVTPQAGHGTPRDGHGLPGMAPGFPGMDMDPPGRTPDPLGGHGTPLGCTQDPPGRMRPPQNGQGPPGVDTGRPRMDTESLGGTRDPSGQARDPPEKLRDPPGRTRPPPGSPRAPRDAEQRHRAIVSWFSDHPRAPFGIHRLVELGREFGKSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKGDVARLVRGDPEGGTAGPGAPGHGTPGAPGASGHGTPGSGTPGQGTPGAPGASGHGTPGSGTPGAPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLFFLGFQGDSLLYLDPHLCQASVDTAREKFPLQSFHCCFPRKMPFGKMDPSCTFGFYAGGTELEQLWGDLARVLAPPSAPERYPIFTLAEGHAQDQALDTPPGPPPSLPRQGKRPKKPNSDEFVFL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404890..405040,405349..405432,405648..405821,405935..406505,406600..406664,406815..407104,407202..407280,407366..407442,407538..407654,407727..407891)
location: region:404890-407891:1
so has part: feature:404890-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-407891:1:exon

XP_048145867.1
type: Protein
SIO_000068: ncbiprotein

position:404890:1
position: 404890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407891:1
position: 407891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404890-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406815-407104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407727-407891:1:exon

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D isoform X4
translation: MSGGGEGPGPPPGPAPGSAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWFTYRSGFPALPGTPRTTDCGWGCTLRSAQMLLGQGLVLHLLGRVSPTPFQTGRGRRRCWNWNRGGPGGAVTPQAGHGTPRDGHGLPGMAPGFPGMDMDPPGRTPDPLGGHGTPLGCTQDPPGRMRPPQNGQGPPGVDTGRPRMDTESLGGTRDPSGQARDPPEKLRDPPGRTRPPPGSPRAPRDAEQRHRAIVSWFSDHPRAPFGIHRLVELGREFGKSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKGDVARLVRGDPEGGTAGPGAPGHGTPGAPGASGHGTPGSGTPGAPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLFFLGFQGDSLLYLDPHLCQASVDTAREKFPLQSFHCCFPRKMPFGKMDPSCTFGFYAGGTELEQLWGDLARVLAPPSAPERYPIFTLAEGHAQDQALDTPPGPPPSLPRQGKRPKKPNSDEFVFL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404890..405040,405349..405432,405648..405821,405935..406505,406600..406664,406815..406940,407004..407104,407202..407280,407366..407442,407538..407654,407727..407891)
location: region:404890-407891:1
so has part: feature:404890-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-406940:1:exon
so has part: feature:407004-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-407891:1:exon

XP_048145870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404890-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406815-406940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407004-407104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-407891:1:exon

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D isoform X2
translation: MSGGGEGPGPPPGPAPGSAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWFTYRSGFPALPGTPRTTDCGWGCTLRSAQMLLGQGLVLHLLGRVSPTPFQTGRGRRRCWNWNRGGPGGAVTPQAGHGMAPGFPGMDMDPPGRTPDPLGGHGTPLGCTQDPPGRMRPPQNGQGPPGVDTGRPRMDTESLGGTRDPSGQARDPPEKLRDPPGRTRPPPGSPRAPRDAEQRHRAIVSWFSDHPRAPFGIHRLVELGREFGKSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKGDVARLVRGDPEGGTAGPGAPGHGTPGAPGASGHGTPGSGTPGQGTPGAPGASGHGTPGSGTPGAPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLFFLGFQGDSLLYLDPHLCQASVDTAREKFPLQSFHCCFPRKMPFGKMDPSCTFGFYAGGTELEQLWGDLARVLAPPSAPERYPIFTLAEGHAQDQALDTPPGPPPSLPRQGKRPKKPNSDEFVFL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404890..405040,405349..405432,405648..405821,405935..406031,406062..406505,406600..406664,406815..407104,407202..407280,407366..407442,407538..407654,407727..407891)
location: region:404890-407891:1
so has part: feature:404890-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405935-406031:1:exon
so has part: feature:406062-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406815-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-407891:1:exon

XP_048145868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404890-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405935-406031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406062-406505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406815-407104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-407891:1:exon

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D isoform X3
translation: MSGGGEGPGPPPGPAPGSAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWFTYRSGFPALPGTPRTTDCGWGCTLRSAQMLLGQGLVLHLLGRDWTWPEALLELEPGGTRRSRDPPGRTRDPSGRTRPPRDGPRVPWDGHGSPRPDTGSPGWTRDPPGMYPGPPRTDATPPEWTGTAWGGYGTPQDGHGVPRGDTGPLGTGTGPPGEAPGPPWTDTAPPGIPPSPPRRGAAAPRHRILVLRPPPRPVRDPPARGAGPGVREERRGLVRPRHRRAPAAGGRGILHGDPRARRLRGPGLHRLVRGDPEGGTAGPGAPGHGTPGAPGASGHGTPGSGTPGQGTPGAPGASGHGTPGSGTPGAPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLFFLGFQGDSLLYLDPHLCQASVDTAREKFPLQSFHCCFPRKMPFGKMDPSCTFGFYAGGTELEQLWGDLARVLAPPSAPERYPIFTLAEGHAQDQALDTPPGPPPSLPRQGKRPKKPNSDEFVFL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404890..405040,405349..405432,405648..405821,405955..406505,406600..406664,406837..407104,407202..407280,407366..407442,407538..407654,407727..407891)
location: region:404890-407891:1
so has part: feature:404890-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405955-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406837-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-407891:1:exon

XP_048145869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404890-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405955-406505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406837-407104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407727-407891:1:exon

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D isoform X5
translation: MSGGGEGPGPPPGPAPGSAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWFTYRSGFPALPGTPRTTDCGWGCTLRSAQMLLGQGLVLHLLGRDWTWPEALLELEPGGTRRSRDPPGRTRDGPRVPWDGHGSPRPDTGSPGWTRDPPGMYPGPPRTDATPPEWTGTAWGGYGTPQDGHGVPRGDTGPLGTGTGPPGEAPGPPWTDTAPPGIPPSPPRRGAAAPRHRILVLRPPPRPVRDPPARGAGPGVREERRGLVRPRHRRAPAAGGRGILHGDPRARRLRGPGLHRLVRGDPEGGTAGPGAPGHGTPGAPGASGHGTPGSGTPGQGTPGAPGASGHGTPGSGTPGAPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLFFLGFQGDSLLYLDPHLCQASVDTAREKFPLQSFHCCFPRKMPFGKMDPSCTFGFYAGGTELEQLWGDLARVLAPPSAPERYPIFTLAEGHAQDQALDTPPGPPPSLPRQGKRPKKPNSDEFVFL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(404890..405040,405349..405432,405648..405821,405955..406031,406062..406505,406600..406664,406837..407104,407202..407280,407366..407442,407538..407654,407727..407891)
location: region:404890-407891:1
so has part: feature:404890-405040:1:exon
so has part: feature:405349-405432:1:exon
so has part: feature:405648-405821:1:exon
so has part: feature:405955-406031:1:exon
so has part: feature:406062-406505:1:exon
so has part: feature:406600-406664:1:exon
so has part: feature:406837-407104:1:exon
so has part: feature:407202-407280:1:exon
so has part: feature:407366-407442:1:exon
so has part: feature:407538-407654:1:exon
so has part: feature:407727-407891:1:exon

XP_048145871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404890-405040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405349-405432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405648-405821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405955-406031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406062-406505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406600-406664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406837-407104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407202-407280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407366-407442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407538-407654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407727-407891:1:exon

KRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(408321..412556)
location: region:408321-412556:-1
so has part: feature:408321-412556:-1:exon
subclass of: SO_0000010

125318943
type: Gene
SIO_000068: ncbigene

position:408321:-1
position: 408321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412556:-1
position: 412556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408321-412556:-1:exon

KRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: KRI1
product: KRI1 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289905.1
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(408321..408743,408846..408941,409034..409098,409178..409308,409495..409639,409777..409859,409936..410011,410079..410249,410330..410425,410692..410806,410885..411000,411075..411149,411238..411331,411421..411470,411586..411643,411734..411839,411926..412031,412106..412173,412446..412556))
location: region:408321-412556:-1
so has part: feature:412446-412556:-1:exon
so has part: feature:412106-412173:-1:exon
so has part: feature:411926-412031:-1:exon
so has part: feature:411734-411839:-1:exon
so has part: feature:411586-411643:-1:exon
so has part: feature:411421-411470:-1:exon
so has part: feature:411238-411331:-1:exon
so has part: feature:411075-411149:-1:exon
so has part: feature:410885-411000:-1:exon
so has part: feature:410692-410806:-1:exon
so has part: feature:410330-410425:-1:exon
so has part: feature:410079-410249:-1:exon
so has part: feature:409936-410011:-1:exon
so has part: feature:409777-409859:-1:exon
so has part: feature:409495-409639:-1:exon
so has part: feature:409178-409308:-1:exon
so has part: feature:409034-409098:-1:exon
so has part: feature:408846-408941:-1:exon
so has part: feature:408321-408743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412446-412556:-1:exon

position:412446:-1
position: 412446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412106-412173:-1:exon

position:412106:-1
position: 412106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412173:-1
position: 412173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411926-412031:-1:exon

position:411926:-1
position: 411926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412031:-1
position: 412031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:411734-411839:-1:exon

position:411734:-1
position: 411734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411839:-1
position: 411839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411586-411643:-1:exon

position:411586:-1
position: 411586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411643:-1
position: 411643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411421-411470:-1:exon

position:411421:-1
position: 411421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411470:-1
position: 411470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:411238-411331:-1:exon

position:411238:-1
position: 411238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411331:-1
position: 411331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:411075-411149:-1:exon

position:411075:-1
position: 411075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411149:-1
position: 411149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:410885-411000:-1:exon

position:410885:-1
position: 410885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411000:-1
position: 411000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:410692-410806:-1:exon

position:410692:-1
position: 410692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410806:-1
position: 410806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:410330-410425:-1:exon

position:410330:-1
position: 410330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410425:-1
position: 410425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:410079-410249:-1:exon

position:410079:-1
position: 410079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410249:-1
position: 410249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:409936-410011:-1:exon

position:409936:-1
position: 409936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410011:-1
position: 410011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:409777-409859:-1:exon

position:409777:-1
position: 409777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409859:-1
position: 409859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:409495-409639:-1:exon

position:409495:-1
position: 409495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409639:-1
position: 409639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:409178-409308:-1:exon

position:409178:-1
position: 409178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409308:-1
position: 409308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:409034-409098:-1:exon

position:409034:-1
position: 409034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409098:-1
position: 409098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:408846-408941:-1:exon

position:408846:-1
position: 408846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408941:-1
position: 408941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:408321-408743:-1:exon

position:408743:-1
position: 408743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KRI1 homolog
translation: MAEPKLRVNAAFAERYGRYRRREELQRLRDRYGDSGDSDSDSSESSGDDVALDPREEREFYRTLALLKTRDPRIYRADTTFYTREESEEEEDGEEEEEEERPAKPMFLKDYERKVVLEKEGKYVDEEDEEDEEAAAKRRKVEASQSYAEEQRALKESFRAFVADSEEEEEEEEGGALLRPRVRSQEEKEREEEQYLRWLRGQAEAPPEPLQDLEPLQKFWSDPALEPGERFLRDYLLGSGFREEEEEEGDEGASLPSLDDSSDEGEQFLQRQQEFERRHNFRFEEPGAAQIQTFPRHIPTSVRRRDERRKEKREQIRERKKKDRARRREELKQLKNLKRQELAARIARIRDASGSDAFGLTDSLLQEDFDPARHDRLMAEWFGEEYYGRGEEEKPQFEEEEGLDDEWNWDAWTGREEGEPQAEPHCEDPDFVMDADYVPEAPLDPVAPPARAPPEVSFGKKRRKTKFREALEREKPPFDPASGPFEQYLDEFYALDFEDMVGDLPCRFKYRRVLPCDFGLTTDEILAADDKELNRWCSLRKTCMYRSEQEERQDQANYSRRAQNLGRKHQILRSLVADPEEPEAAPAKPKFGKKRREKRKRQEEAGKGEPPAAPQNPGAPRRRGGAPLGAAVRLGGREFSGKRLEAFGLNPRRLRFRQLQRQRGKERGEKAGEPPEKPGKNSGSSGKTSRSSGKMAAVNGKKQKRRKNAPSPQKNT
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(408326..408743,408846..408941,409034..409098,409178..409308,409495..409639,409777..409859,409936..410011,410079..410249,410330..410425,410692..410806,410885..411000,411075..411149,411238..411331,411421..411470,411586..411643,411734..411839,411926..412031,412106..412173,412446..412527))
location: region:408326-412527:-1
so has part: feature:412446-412527:-1:exon
so has part: feature:412106-412173:-1:exon
so has part: feature:411926-412031:-1:exon
so has part: feature:411734-411839:-1:exon
so has part: feature:411586-411643:-1:exon
so has part: feature:411421-411470:-1:exon
so has part: feature:411238-411331:-1:exon
so has part: feature:411075-411149:-1:exon
so has part: feature:410885-411000:-1:exon
so has part: feature:410692-410806:-1:exon
so has part: feature:410330-410425:-1:exon
so has part: feature:410079-410249:-1:exon
so has part: feature:409936-410011:-1:exon
so has part: feature:409777-409859:-1:exon
so has part: feature:409495-409639:-1:exon
so has part: feature:409178-409308:-1:exon
so has part: feature:409034-409098:-1:exon
so has part: feature:408846-408941:-1:exon
so has part: feature:408326-408743:-1:exon

XP_048145862.1
type: Protein
SIO_000068: ncbiprotein

position:408326:-1
position: 408326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412527:-1
position: 412527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412446-412527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412106-412173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:411926-412031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411734-411839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411586-411643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411421-411470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411238-411331:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:411075-411149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410885-411000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410692-410806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:410330-410425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:410079-410249:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:409936-410011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:409777-409859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:409495-409639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:409178-409308:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:409034-409098:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:408846-408941:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:408326-408743:-1:exon

AP1M2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: AP1M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412764..415997)
location: region:412764-415997:-1
so has part: feature:412764-415997:-1:exon
subclass of: SO_0000010

125318948
type: Gene
SIO_000068: ncbigene

position:412764:-1
position: 412764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415997:-1
position: 415997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412764-415997:-1:exon

AP1M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: AP1M2
product: adaptor related protein complex 1 subunit mu 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289916.1
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(412764..412870,412990..413065,413247..413372,413569..413727,413802..413873,414096..414238,414308..414434,414795..414942,415013..415143,415244..415311,415405..415561,415890..415997))
location: region:412764-415997:-1
so has part: feature:415890-415997:-1:exon
so has part: feature:415405-415561:-1:exon
so has part: feature:415244-415311:-1:exon
so has part: feature:415013-415143:-1:exon
so has part: feature:414795-414942:-1:exon
so has part: feature:414308-414434:-1:exon
so has part: feature:414096-414238:-1:exon
so has part: feature:413802-413873:-1:exon
so has part: feature:413569-413727:-1:exon
so has part: feature:413247-413372:-1:exon
so has part: feature:412990-413065:-1:exon
so has part: feature:412764-412870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415890-415997:-1:exon

position:415890:-1
position: 415890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:415405-415561:-1:exon

position:415405:-1
position: 415405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415561:-1
position: 415561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:415244-415311:-1:exon

position:415244:-1
position: 415244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415311:-1
position: 415311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415013-415143:-1:exon

position:415013:-1
position: 415013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415143:-1
position: 415143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:414795-414942:-1:exon

position:414795:-1
position: 414795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414942:-1
position: 414942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:414308-414434:-1:exon

position:414308:-1
position: 414308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414434:-1
position: 414434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414096-414238:-1:exon

position:414096:-1
position: 414096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414238:-1
position: 414238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:413802-413873:-1:exon

position:413802:-1
position: 413802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413873:-1
position: 413873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:413569-413727:-1:exon

position:413569:-1
position: 413569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413727:-1
position: 413727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:413247-413372:-1:exon

position:413247:-1
position: 413247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413372:-1
position: 413372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:412990-413065:-1:exon

position:412990:-1
position: 412990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413065:-1
position: 413065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:412764-412870:-1:exon

position:412870:-1
position: 412870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: AP1M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit mu-2
translation: MAASALFILDLKGKPLISRSYKGDVGLGEIEHFMGVLLQREEEGTLTPVLTHGHVHFLWIKHANLYLVATTKKNGNVSLVFSFLYKVVEVFCEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYVTQEGNKLDTGKSRVPTTVTNAVSWRSEGIRYKKNEVFIDVIESVNLLVSANGSVVLSEVVGTIKLKVFLSGMPELRLGLNDRVLFELTGRGKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLHTQVKPLIWIESIIEKFSHSRVEIMVKAKGQFKKQSVANGVEIAVPVPSDADSPKFKTTVGSARYLPERNVVIWSIKSFPGGKEHLMRAHFGLPSVEKEEEEGRPPIAVRFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQIRTS
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(412848..412870,412990..413065,413247..413372,413569..413727,413802..413873,414096..414238,414308..414434,414795..414942,415013..415143,415244..415311,415405..415561,415890..415931))
location: region:412848-415931:-1
so has part: feature:415890-415931:-1:exon
so has part: feature:415405-415561:-1:exon
so has part: feature:415244-415311:-1:exon
so has part: feature:415013-415143:-1:exon
so has part: feature:414795-414942:-1:exon
so has part: feature:414308-414434:-1:exon
so has part: feature:414096-414238:-1:exon
so has part: feature:413802-413873:-1:exon
so has part: feature:413569-413727:-1:exon
so has part: feature:413247-413372:-1:exon
so has part: feature:412990-413065:-1:exon
so has part: feature:412848-412870:-1:exon

XP_048145873.1
type: Protein
SIO_000068: ncbiprotein

position:412848:-1
position: 412848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415931:-1
position: 415931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415890-415931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415405-415561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415244-415311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415013-415143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414795-414942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:414308-414434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414096-414238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413802-413873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413569-413727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413247-413372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412990-413065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412848-412870:-1:exon

SLC44A2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416716..429535
location: region:416716-429535:1
so has part: feature:416716-429535:1:exon
subclass of: SO_0000010

125318944
type: Gene
SIO_000068: ncbigene

position:416716:1
position: 416716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429535:1
position: 429535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416716-429535:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_048289906.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(416716..416838,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,425480..426941)
location: region:416716-426941:1
so has part: feature:416716-416838:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:425480-426941:1:exon

position:426941:1
position: 426941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416716-416838:1:exon

position:416838:1
position: 416838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

position:419355:1
position: 419355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419403:1
position: 419403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

position:419489:1
position: 419489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419562:1
position: 419562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

position:419678:1
position: 419678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419762:1
position: 419762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

position:419857:1
position: 419857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419941:1
position: 419941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

position:420037:1
position: 420037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420153:1
position: 420153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

position:420236:1
position: 420236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420296:1
position: 420296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

position:420442:1
position: 420442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420565:1
position: 420565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

position:420779:1
position: 420779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420862:1
position: 420862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

position:421062:1
position: 421062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421174:1
position: 421174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

position:421336:1
position: 421336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421467:1
position: 421467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

position:421697:1
position: 421697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421796:1
position: 421796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

position:421908:1
position: 421908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422000:1
position: 422000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

position:422237:1
position: 422237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422321:1
position: 422321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

position:422572:1
position: 422572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422834:1
position: 422834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

position:422910:1
position: 422910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423004:1
position: 423004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

position:423645:1
position: 423645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423748:1
position: 423748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

position:424084:1
position: 424084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424157:1
position: 424157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

position:424284:1
position: 424284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424354:1
position: 424354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

position:424524:1
position: 424524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424612:1
position: 424612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

position:424984:1
position: 424984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425068:1
position: 425068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:425480-426941:1:exon

position:425480:1
position: 425480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289907.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(416717..416838,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,426849..429535)
location: region:416717-429535:1
so has part: feature:416717-416838:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:426849-429535:1:exon

position:416717:1
position: 416717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416717-416838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:426849-429535:1:exon

position:426849:1
position: 426849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X2
translation: MDRAAGRRKPNGDYGTPQKYDPTFKGPIYDRGCTDIICCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYMTAYGNPTSLQYYRDFCTPEFGNSQKGPIEVLKDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGRGHRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAIGHVMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESTCPFSGQTCNPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAIVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSQNLRKLLKKTNKGQPDA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(416796..416838,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,426849..426955)
location: region:416796-426955:1
so has part: feature:416796-416838:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:426849-426955:1:exon

XP_048145864.1
type: Protein
SIO_000068: ncbiprotein

position:416796:1
position: 416796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426955:1
position: 426955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416796-416838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:426849-426955:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X1
translation: MDRAAGRRKPNGDYGTPQKYDPTFKGPIYDRGCTDIICCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYMTAYGNPTSLQYYRDFCTPEFGNSQKGPIEVLKDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGRGHRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAIGHVMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESTCPFSGQTCNPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAIVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSEILLKGHLEPSKSADSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(416796..416838,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,425480..425601)
location: region:416796-425601:1
so has part: feature:416796-416838:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:425480-425601:1:exon

XP_048145863.1
type: Protein
SIO_000068: ncbiprotein

position:425601:1
position: 425601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416796-416838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:425480-425601:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_048289909.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(417662..417805,417864..418139,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,425480..426941)
location: region:417662-426941:1
so has part: feature:417662-417805:1:exon
so has part: feature:417864-418139:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:425480-426941:1:exon

position:417662:1
position: 417662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417662-417805:1:exon

position:417805:1
position: 417805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417864-418139:1:exon

position:417864:1
position: 417864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418139:1
position: 418139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:425480-426941:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289908.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(417890..418139,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,426849..429535)
location: region:417890-429535:1
so has part: feature:417890-418139:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:426849-429535:1:exon

position:417890:1
position: 417890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417890-418139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:426849-429535:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X3
translation: MGGHGDNYYGKHGTPQKYDPTFKGPIYDRGCTDIICCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYMTAYGNPTSLQYYRDFCTPEFGNSQKGPIEVLKDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGRGHRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAIGHVMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESTCPFSGQTCNPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAIVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSQNLRKLLKKTNKGQPDA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(418103..418139,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,426849..426955)
location: region:418103-426955:1
so has part: feature:418103-418139:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:426849-426955:1:exon

XP_048145865.1
type: Protein
SIO_000068: ncbiprotein

position:418103:1
position: 418103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418103-418139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:426849-426955:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X4
translation: MGGHGDNYYGKHGTPQKYDPTFKGPIYDRGCTDIICCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYMTAYGNPTSLQYYRDFCTPEFGNSQKGPIEVLKDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGRGHRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAIGHVMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESTCPFSGQTCNPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAIVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSEILLKGHLEPSKSADSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(418103..418139,419355..419403,419489..419562,419678..419762,419857..419941,420037..420153,420236..420296,420442..420565,420779..420862,421062..421174,421336..421467,421697..421796,421908..422000,422237..422321,422572..422834,422910..423004,423645..423748,424084..424157,424284..424354,424524..424612,424984..425068,425480..425601)
location: region:418103-425601:1
so has part: feature:418103-418139:1:exon
so has part: feature:419355-419403:1:exon
so has part: feature:419489-419562:1:exon
so has part: feature:419678-419762:1:exon
so has part: feature:419857-419941:1:exon
so has part: feature:420037-420153:1:exon
so has part: feature:420236-420296:1:exon
so has part: feature:420442-420565:1:exon
so has part: feature:420779-420862:1:exon
so has part: feature:421062-421174:1:exon
so has part: feature:421336-421467:1:exon
so has part: feature:421697-421796:1:exon
so has part: feature:421908-422000:1:exon
so has part: feature:422237-422321:1:exon
so has part: feature:422572-422834:1:exon
so has part: feature:422910-423004:1:exon
so has part: feature:423645-423748:1:exon
so has part: feature:424084-424157:1:exon
so has part: feature:424284-424354:1:exon
so has part: feature:424524-424612:1:exon
so has part: feature:424984-425068:1:exon
so has part: feature:425480-425601:1:exon

XP_048145866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418103-418139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419355-419403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419489-419562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419678-419762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419857-419941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420037-420153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420236-420296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420442-420565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420779-420862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421062-421174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421336-421467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:421697-421796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421908-422000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:422237-422321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422572-422834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422910-423004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:423645-423748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424084-424157:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424284-424354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424524-424612:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424984-425068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:425480-425601:1:exon

ILF3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 430643..445768
location: region:430643-445768:1
so has part: feature:430643-445768:1:exon
subclass of: SO_0000010

125318871
type: Gene
SIO_000068: ncbigene

position:430643:1
position: 430643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445768:1
position: 445768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430643-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289780.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430643..430690,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445768)
location: region:430643-445768:1
so has part: feature:430643-430690:1:exon
so has part: feature:433728-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430643-430690:1:exon

position:430690:1
position: 430690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

position:433728:1
position: 433728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433823:1
position: 433823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

position:433909:1
position: 433909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434135:1
position: 434135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

position:434397:1
position: 434397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434577:1
position: 434577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

position:434781:1
position: 434781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434928:1
position: 434928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

position:436250:1
position: 436250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436341:1
position: 436341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

position:436872:1
position: 436872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436967:1
position: 436967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

position:438122:1
position: 438122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438233:1
position: 438233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

position:438516:1
position: 438516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438613:1
position: 438613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

position:439008:1
position: 439008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439119:1
position: 439119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439340:1:exon

position:439212:1
position: 439212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439340:1
position: 439340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

position:439907:1
position: 439907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440106:1
position: 440106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

position:440355:1
position: 440355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440525:1
position: 440525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

position:440743:1
position: 440743
reference: sequence
type: ForwardStrandPosition
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position:440880:1
position: 440880
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

position:441144:1
position: 441144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441320:1
position: 441320
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:441701-441857:1:exon

position:441701:1
position: 441701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441857:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

position:442046:1
position: 442046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442099:1
position: 442099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

position:444219:1
position: 444219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444557:1
position: 444557
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:445053-445181:1:exon

position:445053:1
position: 445053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445181:1
position: 445181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

position:445286:1
position: 445286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289779.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
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so has part: feature:445286-445768:1:exon

position:430861:1
position: 430861
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

position:430904:1
position: 430904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289783.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445172,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
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so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445172:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445172:1:exon

position:445172:1
position: 445172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289781.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445181,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
so has part: feature:433728-433823:1:exon
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so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
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so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441704-441857:1:exon
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so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441704-441857:1:exon

position:441704:1
position: 441704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289784.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
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so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
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so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
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so has part: feature:445053-445181:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439322:1:exon

position:439322:1
position: 439322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289785.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445181,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
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so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
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so has part: feature:439008-439119:1:exon
so has part: feature:439212-439322:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
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so has part: feature:441704-441857:1:exon
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so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441704-441857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289786.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(430861..430904,433728..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445172,445286..445768)
location: region:430861-445768:1
so has part: feature:430861-430904:1:exon
so has part: feature:433728-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439322:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441704-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445172:1:exon
so has part: feature:445286-445768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430861-430904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433728-433823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439212-439322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441704-441857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445053-445172:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445286-445768:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445416:1:exon

XP_048145736.1
type: Protein
SIO_000068: ncbiprotein

position:433821:1
position: 433821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445416:1
position: 445416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445416:1:exon

XP_048145737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X3
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445172,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445172:1:exon
so has part: feature:445286-445416:1:exon

XP_048145740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X2
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439340,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445181,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439340:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441704-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445416:1:exon

XP_048145738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439340:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441704-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X4
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441701..441857,442046..442099,444219..444557,445053..445181,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439322:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441701-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445416:1:exon

XP_048145741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441701-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X5
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445181,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439322:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441704-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445181:1:exon
so has part: feature:445286-445416:1:exon

XP_048145742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441704-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X6
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLTLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGAGYGSYGYGGNSATAGYSQFYSNGGHSNSGSGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYATHQGQQPYGQGQYGGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRSGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(433821..433823,433909..434135,434397..434577,434781..434928,436250..436341,436872..436967,438122..438233,438516..438613,439008..439119,439212..439322,439907..440106,440355..440525,440743..440880,441144..441320,441704..441857,442046..442099,444219..444557,445053..445172,445286..445416)
location: region:433821-445416:1
so has part: feature:433821-433823:1:exon
so has part: feature:433909-434135:1:exon
so has part: feature:434397-434577:1:exon
so has part: feature:434781-434928:1:exon
so has part: feature:436250-436341:1:exon
so has part: feature:436872-436967:1:exon
so has part: feature:438122-438233:1:exon
so has part: feature:438516-438613:1:exon
so has part: feature:439008-439119:1:exon
so has part: feature:439212-439322:1:exon
so has part: feature:439907-440106:1:exon
so has part: feature:440355-440525:1:exon
so has part: feature:440743-440880:1:exon
so has part: feature:441144-441320:1:exon
so has part: feature:441704-441857:1:exon
so has part: feature:442046-442099:1:exon
so has part: feature:444219-444557:1:exon
so has part: feature:445053-445172:1:exon
so has part: feature:445286-445416:1:exon

XP_048145743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433821-433823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433909-434135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434397-434577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434781-434928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436250-436341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436872-436967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438122-438233:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438516-438613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439008-439119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:439212-439322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439907-440106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440355-440525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440743-440880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441144-441320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441704-441857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442046-442099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444219-444557:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445053-445172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:445286-445416:1:exon

LOC125318874
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(446257..449607)
location: region:446257-449607:-1
so has part: feature:446257-449607:-1:exon
subclass of: SO_0000010

125318874
type: Gene
SIO_000068: ncbigene

position:446257:-1
position: 446257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449607:-1
position: 449607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446257-449607:-1:exon

LOC125318874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318874
product: beta-1,3-galactosyltransferase 2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289794.1
SIO_010081: LOC125318874
subclass of: SO_0000673
so part of: LOC125318874
location: complement(join(446257..447802,449091..449607))
location: region:446257-449607:-1
so has part: feature:449091-449607:-1:exon
so has part: feature:446257-447802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449091-449607:-1:exon

position:449091:-1
position: 449091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446257-447802:-1:exon

position:447802:-1
position: 447802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125318874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318874
product: beta-1,3-galactosyltransferase 2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289795.1
SIO_010081: LOC125318874
subclass of: SO_0000673
so part of: LOC125318874
location: complement(join(446257..447802,448846..449607))
location: region:446257-449607:-1
so has part: feature:448846-449607:-1:exon
so has part: feature:446257-447802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448846-449607:-1:exon

position:448846:-1
position: 448846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446257-447802:-1:exon

LOC125318874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 2-like
translation: MKLPPSSRLVLLPVAAGLALLALHTQHPASPPSTTVHPSPAPRPSNATVPPQPPRHPLQPPYPYPYRFLLNHPEKCRERAPFLVLLVVTAPADLAARDAVRRTWGNESAVPGLSVLRLFLLGVHPVFGAELRPVLQEEDKLHGDLLQQDFLDTYNNLTLKTLMGLEWVSRFCPNATYVMKADHDVFLNLEFLAGRLLQPLRTNFMTGYVYRWTGPLRNPAYKWFVPREVYPNDTYPPYCGGPGYVLSGDLARRVFAVAQTLPAINMEDAFVGICLHALGVAVTDPPAGTFTMYRLDYDKCRFSRLVMVHHYGPKELLQVWPHFRDVPVECP
SIO_010081: LOC125318874
subclass of: SO_0000673
so part of: LOC125318874
location: complement(446800..447795)
location: region:446800-447795:-1
so has part: feature:446800-447795:-1:exon

XP_048145751.1
type: Protein
SIO_000068: ncbiprotein

position:446800:-1
position: 446800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447795:-1
position: 447795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446800-447795:-1:exon

LOC125318874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 2-like
translation: MKLPPSSRLVLLPVAAGLALLALHTQHPASPPSTTVHPSPAPRPSNATVPPQPPRHPLQPPYPYPYRFLLNHPEKCRERAPFLVLLVVTAPADLAARDAVRRTWGNESAVPGLSVLRLFLLGVHPVFGAELRPVLQEEDKLHGDLLQQDFLDTYNNLTLKTLMGLEWVSRFCPNATYVMKADHDVFLNLEFLAGRLLQPLRTNFMTGYVYRWTGPLRNPAYKWFVPREVYPNDTYPPYCGGPGYVLSGDLARRVFAVAQTLPAINMEDAFVGICLHALGVAVTDPPAGTFTMYRLDYDKCRFSRLVMVHHYGPKELLQVWPHFRDVPVECP
SIO_010081: LOC125318874
subclass of: SO_0000673
so part of: LOC125318874
location: complement(446800..447795)
location: region:446800-447795:-1
so has part: feature:446800-447795:-1:exon

XP_048145752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446800-447795:-1:exon

QTRT1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449817..453408)
location: region:449817-453408:-1
so has part: feature:449817-453408:-1:exon
subclass of: SO_0000010

125318873
type: Gene
SIO_000068: ncbigene

position:449817:-1
position: 449817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453408:-1
position: 453408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449817-453408:-1:exon

QTRT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: QTRT1
product: queuine tRNA-ribosyltransferase catalytic subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289793.1
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(449817..450174,450257..450341,450415..450524,450618..450693,450778..450916,451454..451569,451655..451733,451816..451954,452211..452279,452655..453408))
location: region:449817-453408:-1
so has part: feature:452655-453408:-1:exon
so has part: feature:452211-452279:-1:exon
so has part: feature:451816-451954:-1:exon
so has part: feature:451655-451733:-1:exon
so has part: feature:451454-451569:-1:exon
so has part: feature:450778-450916:-1:exon
so has part: feature:450618-450693:-1:exon
so has part: feature:450415-450524:-1:exon
so has part: feature:450257-450341:-1:exon
so has part: feature:449817-450174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452655-453408:-1:exon

position:452655:-1
position: 452655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452211-452279:-1:exon

position:452211:-1
position: 452211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452279:-1
position: 452279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451816-451954:-1:exon

position:451816:-1
position: 451816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451954:-1
position: 451954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:451655-451733:-1:exon

position:451655:-1
position: 451655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451733:-1
position: 451733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451454-451569:-1:exon

position:451454:-1
position: 451454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451569:-1
position: 451569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450778-450916:-1:exon

position:450778:-1
position: 450778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450916:-1
position: 450916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450618-450693:-1:exon

position:450618:-1
position: 450618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450693:-1
position: 450693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:450415-450524:-1:exon

position:450415:-1
position: 450415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450524:-1
position: 450524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:450257-450341:-1:exon

position:450257:-1
position: 450257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450341:-1
position: 450341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449817-450174:-1:exon

position:450174:-1
position: 450174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QTRT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: queuine tRNA-ribosyltransferase catalytic subunit 1
translation: MAAPTAGPARPVPVLRVVAECGRSRARAGELRLPHGNVPCPVFMPVGTRGTAKGLTAAQLAALGCRICLGNTFHLGTRPGSELVRRSGGLHGFMDWPHNLLTDSGGFQMVSLLELSEVSEEGVRFRPPHGGEEILLSPEKSMEIQNALGADIVMQLDDVVSSTTTGPRVEEAMHRSVRWLDRCVAAHARPEQQLLFAIIQGGLDPDLRLRCIQAMTQRDVPGFAIGGLSGGEDKARFWRTVKFSAEHLPRDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPWGSLQLKNHQFAKDFRPIDADCGCSTCQRYSRAYLHALLRSNTAALHLLTLHNIAYQMKLMSSMRESILQQRFPEFVREFMDAMYGGRGGPPLWVKEALESVGITLD
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(450022..450174,450257..450341,450415..450524,450618..450693,450778..450916,451454..451569,451655..451733,451816..451954,452211..452279,452655..452891))
location: region:450022-452891:-1
so has part: feature:452655-452891:-1:exon
so has part: feature:452211-452279:-1:exon
so has part: feature:451816-451954:-1:exon
so has part: feature:451655-451733:-1:exon
so has part: feature:451454-451569:-1:exon
so has part: feature:450778-450916:-1:exon
so has part: feature:450618-450693:-1:exon
so has part: feature:450415-450524:-1:exon
so has part: feature:450257-450341:-1:exon
so has part: feature:450022-450174:-1:exon

XP_048145750.1
type: Protein
SIO_000068: ncbiprotein

position:450022:-1
position: 450022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452891:-1
position: 452891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452655-452891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452211-452279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451816-451954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451655-451733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451454-451569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450778-450916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450618-450693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450415-450524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450257-450341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450022-450174:-1:exon

DNM2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453654..472075
location: region:453654-472075:1
so has part: feature:453654-472075:1:exon
subclass of: SO_0000010

125318872
type: Gene
SIO_000068: ncbigene

position:453654:1
position: 453654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472075:1
position: 472075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453654-472075:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DNM2
product: dynamin 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289788.1
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453654..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,462516..462545,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..472075)
location: region:453654-472075:1
so has part: feature:453654-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:462516-462545:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-472075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453654-453907:1:exon

position:453907:1
position: 453907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

position:457912:1
position: 457912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457985:1
position: 457985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

position:458747:1
position: 458747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458896:1
position: 458896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

position:459102:1
position: 459102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459305:1
position: 459305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

position:459546:1
position: 459546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459644:1
position: 459644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

position:459868:1
position: 459868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460028:1
position: 460028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

position:460127:1
position: 460127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460269:1
position: 460269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

position:460599:1
position: 460599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460734:1
position: 460734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

position:461005:1
position: 461005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461072:1
position: 461072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

position:461292:1
position: 461292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461430:1
position: 461430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

position:461787:1
position: 461787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461873:1
position: 461873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

position:461946:1
position: 461946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462016:1
position: 462016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:462516-462545:1:exon

position:462516:1
position: 462516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462545:1
position: 462545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

position:463536:1
position: 463536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463587:1
position: 463587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:464206-464217:1:exon

position:464206:1
position: 464206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464217:1
position: 464217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:466364-466477:1:exon

position:466364:1
position: 466364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466477:1
position: 466477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:468246-468355:1:exon

position:468246:1
position: 468246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468355:1
position: 468355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:468623-468734:1:exon

position:468623:1
position: 468623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468734:1
position: 468734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:468954-469118:1:exon

position:468954:1
position: 468954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469118:1
position: 469118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:469587-469819:1:exon

position:469587:1
position: 469587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469819:1
position: 469819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:470385-470633:1:exon

position:470385:1
position: 470385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470633:1
position: 470633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:470759-472075:1:exon

position:470759:1
position: 470759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DNM2
product: dynamin 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289789.1
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453654..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,462516..462545,463536..463587,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..472075)
location: region:453654-472075:1
so has part: feature:453654-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:462516-462545:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-472075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453654-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462516-462545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470759-472075:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DNM2
product: dynamin 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289790.1
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453654..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463175..463183,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..472075)
location: region:453654-472075:1
so has part: feature:453654-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463175-463183:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-472075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453654-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463175-463183:1:exon

position:463175:1
position: 463175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463183:1
position: 463183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:464206-464217:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:470759-472075:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DNM2
product: dynamin 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289792.1
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453654..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463536..463587,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..472075)
location: region:453654-472075:1
so has part: feature:453654-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-472075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453654-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470759-472075:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DNM2
product: dynamin 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289791.1
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453655..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..472075)
location: region:453655-472075:1
so has part: feature:453655-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-472075:1:exon

position:453655:1
position: 453655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453655-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:464206-464217:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470759-472075:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X1
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGLDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREQEGKTKDQILLLIDIELSYINTNHEDFIGFANCFTEQHVVTGAQQRNTQTNKKRAIPNQGEILVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKDFILSELLAFLYSSSDQNSLMEESAEQAQRRDEMLRMYHALKEALGIIGDISTSTVSTPVPPPVDDTWLQPGAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPPLLPLPGGGPPAFTAPPIPSRLGPFAAASDPFTAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453747..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,462516..462545,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..470825)
location: region:453747-470825:1
so has part: feature:453747-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:462516-462545:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-470825:1:exon

XP_048145745.1
type: Protein
SIO_000068: ncbiprotein

position:453747:1
position: 453747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470825:1
position: 470825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453747-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462516-462545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:464206-464217:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:470759-470825:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X2
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGLDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREQEGKTKDQILLLIDIELSYINTNHEDFIGFANCFTEQHVVTGAQQRNTQTNKKRAIPNQVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKDFILSELLAFLYSSSDQNSLMEESAEQAQRRDEMLRMYHALKEALGIIGDISTSTVSTPVPPPVDDTWLQPGAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPPLLPLPGGGPPAFTAPPIPSRLGPFAAASDPFTAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453747..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,462516..462545,463536..463587,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..470825)
location: region:453747-470825:1
so has part: feature:453747-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:462516-462545:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-470825:1:exon

XP_048145746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453747-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462516-462545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470759-470825:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X3
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGLDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREQEGKTKDQILLLIDIELSYINTNHEDFIGFAKRDSAQQRNTQTNKKRAIPNQGEILVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKDFILSELLAFLYSSSDQNSLMEESAEQAQRRDEMLRMYHALKEALGIIGDISTSTVSTPVPPPVDDTWLQPGAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPPLLPLPGGGPPAFTAPPIPSRLGPFAAASDPFTAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453747..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463175..463183,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..470825)
location: region:453747-470825:1
so has part: feature:453747-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463175-463183:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-470825:1:exon

XP_048145747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453747-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463175-463183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:464206-464217:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:470759-470825:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X4
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGLDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREQEGKTKDQILLLIDIELSYINTNHEDFIGFANAQQRNTQTNKKRAIPNQGEILVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKDFILSELLAFLYSSSDQNSLMEESAEQAQRRDEMLRMYHALKEALGIIGDISTSTVSTPVPPPVDDTWLQPGAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPPLLPLPGGGPPAFTAPPIPSRLGPFAAASDPFTAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453747..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463536..463587,464206..464217,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..470825)
location: region:453747-470825:1
so has part: feature:453747-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:464206-464217:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-470825:1:exon

XP_048145748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453747-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:464206-464217:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470759-470825:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X5
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGLDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREQEGKTKDQILLLIDIELSYINTNHEDFIGFANAQQRNTQTNKKRAIPNQVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKDFILSELLAFLYSSSDQNSLMEESAEQAQRRDEMLRMYHALKEALGIIGDISTSTVSTPVPPPVDDTWLQPGAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPPLLPLPGGGPPAFTAPPIPSRLGPFAAASDPFTAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(453747..453907,457912..457985,458747..458896,459102..459305,459546..459644,459868..460028,460127..460269,460599..460734,461005..461072,461292..461430,461787..461873,461946..462016,463536..463587,466364..466477,468246..468355,468623..468734,468954..469118,469587..469819,470385..470633,470759..470825)
location: region:453747-470825:1
so has part: feature:453747-453907:1:exon
so has part: feature:457912-457985:1:exon
so has part: feature:458747-458896:1:exon
so has part: feature:459102-459305:1:exon
so has part: feature:459546-459644:1:exon
so has part: feature:459868-460028:1:exon
so has part: feature:460127-460269:1:exon
so has part: feature:460599-460734:1:exon
so has part: feature:461005-461072:1:exon
so has part: feature:461292-461430:1:exon
so has part: feature:461787-461873:1:exon
so has part: feature:461946-462016:1:exon
so has part: feature:463536-463587:1:exon
so has part: feature:466364-466477:1:exon
so has part: feature:468246-468355:1:exon
so has part: feature:468623-468734:1:exon
so has part: feature:468954-469118:1:exon
so has part: feature:469587-469819:1:exon
so has part: feature:470385-470633:1:exon
so has part: feature:470759-470825:1:exon

XP_048145749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453747-453907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457912-457985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458747-458896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459102-459305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459546-459644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459868-460028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460127-460269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460599-460734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461005-461072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461292-461430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461787-461873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461946-462016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463536-463587:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466364-466477:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:468246-468355:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:468623-468734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:468954-469118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:469587-469819:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:470385-470633:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470759-470825:1:exon

LOC125318942
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125318942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473804..474734
location: region:473804-474734:1
so has part: feature:473804-474734:1:exon
subclass of: SO_0000010

125318942
type: Gene
SIO_000068: ncbigene

position:473804:1
position: 473804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474734:1
position: 474734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473804-474734:1:exon

LOC125318942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125318942
product: collagen alpha-1(I) chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048289904.1
SIO_010081: LOC125318942
subclass of: SO_0000673
so part of: LOC125318942
location: join(473804..473889,473989..474069,474159..474246,474359..474403,474506..474734)
location: region:473804-474734:1
so has part: feature:473804-473889:1:exon
so has part: feature:473989-474069:1:exon
so has part: feature:474159-474246:1:exon
so has part: feature:474359-474403:1:exon
so has part: feature:474506-474734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473804-473889:1:exon

position:473889:1
position: 473889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473989-474069:1:exon

position:473989:1
position: 473989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474069:1
position: 474069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474159-474246:1:exon

position:474159:1
position: 474159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474246:1
position: 474246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474359-474403:1:exon

position:474359:1
position: 474359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474403:1
position: 474403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474506-474734:1:exon

position:474506:1
position: 474506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125318942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125318942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MPSVTPATPRPRDPPPTAGALRGSSFLAPPGSRSVPPSWGCCCCWRPWPWPGKASGRRRGQSHTVPAPSFPHGPRAGAAVPVRGVPEDPGCASAPLGPGSRSFERVPVSPRVGAAPLLPQLRRGPGAARAPTGLSGCQ
SIO_010081: LOC125318942
subclass of: SO_0000673
so part of: LOC125318942
location: join(473999..474069,474159..474246,474359..474403,474506..474718)
location: region:473999-474718:1
so has part: feature:473999-474069:1:exon
so has part: feature:474159-474246:1:exon
so has part: feature:474359-474403:1:exon
so has part: feature:474506-474718:1:exon

XP_048145861.1
type: Protein
SIO_000068: ncbiprotein

position:473999:1
position: 473999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474718:1
position: 474718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473999-474069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474159-474246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474359-474403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474506-474718:1:exon

CARM1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 475400..481971
location: region:475400-481971:1
so has part: feature:475400-481971:1:exon
subclass of: SO_0000010

125318919
type: Gene
SIO_000068: ncbigene

position:475400:1
position: 475400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481971:1
position: 481971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475400-481971:1:exon

CARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CARM1
product: coactivator associated arginine methyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_048289873.1
SIO_010081: CARM1
subclass of: SO_0000673
so part of: CARM1
location: join(475400..475572,477570..477695,477782..477888,477970..478074,478744..478854,478945..479122,479201..479291,479841..479922,480023..480108,480209..480298,480476..480613,481050..481139,481220..481332,481422..481499,481602..481670,481753..481971)
location: region:475400-481971:1
so has part: feature:475400-475572:1:exon
so has part: feature:477570-477695:1:exon
so has part: feature:477782-477888:1:exon
so has part: feature:477970-478074:1:exon
so has part: feature:478744-478854:1:exon
so has part: feature:478945-479122:1:exon
so has part: feature:479201-479291:1:exon
so has part: feature:479841-479922:1:exon
so has part: feature:480023-480108:1:exon
so has part: feature:480209-480298:1:exon
so has part: feature:480476-480613:1:exon
so has part: feature:481050-481139:1:exon
so has part: feature:481220-481332:1:exon
so has part: feature:481422-481499:1:exon
so has part: feature:481602-481670:1:exon
so has part: feature:481753-481971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475400-475572:1:exon

position:475572:1
position: 475572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477570-477695:1:exon

position:477570:1
position: 477570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477695:1
position: 477695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:477782-477888:1:exon

position:477782:1
position: 477782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477888:1
position: 477888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477970-478074:1:exon

position:477970:1
position: 477970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478074:1
position: 478074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:478744-478854:1:exon

position:478744:1
position: 478744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478854:1
position: 478854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:478945-479122:1:exon

position:478945:1
position: 478945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479122:1
position: 479122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:479201-479291:1:exon

position:479201:1
position: 479201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479291:1
position: 479291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:479841-479922:1:exon

position:479841:1
position: 479841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479922:1
position: 479922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480023-480108:1:exon

position:480023:1
position: 480023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480108:1
position: 480108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:480209-480298:1:exon

position:480209:1
position: 480209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480298:1
position: 480298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:480476-480613:1:exon

position:480476:1
position: 480476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480613:1
position: 480613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:481050-481139:1:exon

position:481050:1
position: 481050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481139:1
position: 481139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:481220-481332:1:exon

position:481220:1
position: 481220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481332:1
position: 481332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:481422-481499:1:exon

position:481422:1
position: 481422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481499:1
position: 481499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:481602-481670:1:exon